Commit Graph

1087 Commits

Author SHA1 Message Date
Bernaldo Mihasi 7b12d7b46d temporarily endpoint for appending "rda." in schematic values of dataset profiles 2023-04-20 10:12:55 +03:00
Diamantis Tziotzios 89922eaecc Merge remote-tracking branch 'origin/semantics' into Development 2023-04-18 11:19:48 +03:00
Bernaldo Mihasi 11a9abae42 version change in base deposit repository 2023-04-18 10:51:13 +03:00
Bernaldo Mihasi 8293535bb0 add zenodo properties in schematics 2023-04-18 09:41:01 +03:00
Konstantina Galouni c9b4b35e39 h2020.docx: [Bug fix] Updated image of Argos in h2020.docx DMP template | DataManagementPlanManager.java & DatasetManager.java: Added parameter "isDataset" in fillFirstPage() | WordBuilder.java: [Bug fix] Added parameter isDataset in fillFirstPage() and added some checks in description. 2023-04-05 11:13:26 +03:00
Bernaldo Mihasi 63c866d74f set creator in new/cloned/newVersioned dmp 2023-03-30 11:44:50 +03:00
Bernaldo Mihasi b6b7a2444c add xml attributes in dmp xml export 2023-03-30 11:44:00 +03:00
Bernaldo Mihasi 18a200f099 no message 2023-03-27 15:25:19 +03:00
Bernaldo Mihasi 18ccb3ca0c changes in dmp deposit model 2023-03-27 15:24:50 +03:00
Bernaldo Mihasi a90f21b6aa fix issues in dmp xml export 2023-03-27 15:21:12 +03:00
Bernaldo Mihasi 376bb2ca53 changes in dmp deposit model 2023-03-27 14:59:47 +03:00
Bernaldo Mihasi 969df0357a migrate rda properties in dataset profiles definitions in db to schematics 2023-03-27 14:58:45 +03:00
Bernaldo Mihasi c35bc2efed remove rda property from models 2023-03-27 14:52:37 +03:00
Bernaldo Mihasi 519cb260c6 fix issue with users returned as empty array, add researchers in response 2023-03-07 09:44:16 +02:00
Bernaldo Mihasi 87c9730524 puplic api return total count in response 2023-03-03 11:44:21 +02:00
Diamantis Tziotzios 9ebefa8369 Merge branch 'public_api_update' into Development 2023-03-03 10:23:52 +02:00
Konstantina Galouni 28c1c9b71d h2020.docx & WordBuilder.java: Updated h2020.docx DMP template and added export of DMP description. 2023-02-28 11:01:44 +02:00
Bernaldo Mihasi e2505039df cleanup unused code 2023-02-21 14:09:33 +02:00
Bernaldo Mihasi b273ca4ed7 search for schematics fields in prefilling 2023-02-21 12:44:48 +02:00
Bernaldo Mihasi 0c57bba0b4 rda json dmp import/export 2023-02-21 11:57:34 +02:00
Bernaldo Mihasi 9a8fc5e92e schematics implementation, xml import export of dataset profiles 2023-02-21 11:46:44 +02:00
Bernaldo Mihasi e22e348330 cleanup unused code 2023-02-21 11:41:07 +02:00
Bernaldo Mihasi ab124e87ea add new filters(grantLike, funderLike, collaboratorsLike) 2023-02-14 12:16:11 +02:00
Bernaldo Mihasi 57a400f817 update repository base version 2023-01-18 09:37:34 +02:00
Bernaldo Mihasi 030f1ccf8e add repository logo 2023-01-17 14:41:04 +02:00
Diamantis Tziotzios 4dccaa93b8 Merge branch 'multipleRepos' into Development 2023-01-16 14:11:43 +02:00
Bernaldo Mihasi 66b2596036 delete files used for deposit in tmp storage 2022-12-27 09:44:43 +02:00
Bernaldo Mihasi 749dbefc38 1. return bad request when deposition failed and returned null
2. close modal with repositories after a successful deposition
2022-12-19 16:07:03 +02:00
Bernaldo Mihasi fbc274282c fix deposit base dependancy in web 2022-12-13 10:55:32 +02:00
Bernaldo Mihasi 39d709f41d no message 2022-12-13 09:46:00 +02:00
Bernaldo Mihasi c6d37806c8 drop column doi from dmp and refactor code(replace single doi with list of dois) 2022-12-08 13:12:54 +02:00
Bernaldo Mihasi ad00695d4e fix bug allowing invalid characters in pdf name 2022-12-08 13:04:55 +02:00
Bernaldo Mihasi 572be373e5 don't deposit empty supportingFiles.zip when no files are uploaded in datasets 2022-12-08 13:02:08 +02:00
George Kalampokis 6caef3e890 Remove thread sleeps when trying to load config files and removed principal from Exception Handling Controller 2022-11-30 18:19:40 +02:00
Bernaldo Mihasi 679354f699 deposit datasets' attached files in zip format 2022-11-30 09:43:03 +02:00
Konstantinos Triantafyllou c9c99be603 Merge branch 'table-field' into Development 2022-11-29 10:19:15 +02:00
Diamantis Tziotzios 75007286fc elasticsearch cert change 2022-11-25 17:03:25 +02:00
Bernaldo Mihasi 7a0e1c89f2 when finalizing a dmp and its access rights are open, make it publicly available in Argos 2022-11-24 16:29:11 +02:00
Bernaldo Mihasi 573aab059b remove redundant parameter in deposit interface 2022-11-22 09:58:47 +02:00
Bernaldo Mihasi 5e2639848b dmps are deposited in dataverse as datasets under a parent predefined dataverse collenction
when a new dmp version is created and deposited, the corresponding dataset in dataverse/collection in zenodo create a new version too
deposit dmps as published not drafts
2022-11-22 09:40:05 +02:00
George Kalampokis 0888b7cd74 Enable health and metrics built-in endpoints 2022-11-21 14:06:59 +02:00
Konstantinos Triantafyllou 925fc3ce4a Merge branch 'Development' into table-field 2022-11-10 17:54:28 +02:00
Bernaldo Mihasi b4490cb0f3 [WIP] implement dataverse repository deposit 2022-11-10 10:12:11 +02:00
Konstantina Galouni 2bbf89e779 HtmlToWorldBuilder.java & WordBuilder.java: Added methods for exporting inputs of a question as table. 2022-11-08 14:39:23 +02:00
Diamantis Tziotzios 0cd20605f0 user guide image update 2022-11-02 15:39:42 +02:00
Bernaldo Mihasi 6b2bc3c1e0 cleanup code, add authorizationUrl and recordUrl in repositories config 2022-11-02 13:31:42 +02:00
Bernaldo Mihasi 59e26dbb8d [WIP] EntityDoi table 2022-11-02 09:41:40 +02:00
Konstantina Galouni 37724380e9 #7276 - Added tableView true/false option in multiplicity 2022-11-01 16:24:28 +02:00
Bernaldo Mihasi 7d624a2daa [WIP] system deposit authentication, using default repo token 2022-10-27 09:32:26 +03:00
Bernaldo Mihasi ab66a5f1da [WIP] implement zenodo repository deposit, add authentication for depositions 2022-10-26 13:50:01 +03:00
Bernaldo Mihasi 7dd2030eb3 [WIP] create deposit interface and implement multiple deposit repositories 2022-10-24 09:35:49 +03:00
Bernaldo Mihasi 20f618a5d7 fix request body examples in publicapi 2022-10-18 09:39:46 +03:00
Bernaldo Mihasi 2b692fa579 fix public api paths 2022-10-10 11:56:48 +03:00
Bernaldo Mihasi ef327a0a57 expose public api 2022-10-04 13:06:49 +03:00
Bernaldo Mihasi 5087a37e15 dockerization 2022-09-13 10:35:56 +03:00
Konstantina Galouni 49e42e9cba h2020_dataset.docx & WordBuilder.java & DataManagementPlanManager.java & DatasetManager.java: Updated footer of Dataset template to set title of DMP and Dataset. 2022-07-28 17:30:44 +03:00
George Kalampokis fa723c07ae Fix critical issue with open file handle leak on user guide folder 2022-07-28 11:23:39 +03:00
Konstantina Galouni a2228a5fb6 #7597, #7893, #7895, #7898: Updated DMP template file (h2020.docx) for export | Added Dataset template file (h2020_dataset.docx) for export | Updated indentation on exported docs.
1. h2020.docx, h2020_dataset.docx: Updated DMP template & Added Dataset template.
2. application.properties, application-devel.properties, application-production.properties, application-staging.properties: Added property for dataset template file path configuration.h2020datasettemplate=documents/h2020_dataset.docx
3. ConfigLoader.java: Added method XWPFDocument getDatasetDocument();
4. DefaultConfigLoader.java: Added fiedls and methods for loading Dataset template (h2020_dataset.docx).
5. DataManagementPlanManager.java, DatasetManager.java, , HtmlToWorldBuilder.java, WordBuilder.java: Updated header/footer/first page in exports for DMPs and Datasets  | Updated indentation in exports.
2022-07-26 17:00:54 +03:00
Konstantina Galouni 9b4c7aeb6f DataManagementPlanManager.java: #7893 - Added description of Datasets on DMP exported word file. 2022-07-12 12:52:04 +03:00
Konstantinos Triantafyllou 304a6cfdb3 Backend: Fix a bug with compareTo of a field throwing an error because ordinal is not exists. FrontEnd: Initialize visibility rules for multiple fields coming from service according to their parents. 2022-06-23 15:38:48 +03:00
Konstantina Galouni 18e98938d5 WordBuilder.java: #7869 - In exported file fix hidden question title and a. /b. /c for empty answers.
a. fix hidden question title when more than 1 multiplicity answers,
b. fix hidden question title when  no value in the last multiplicity answer,
c. Do not show a. / b. / c.... for empty multiplicity answers,
d. Do not show a. / b. / c.... when more than 1 multiplicity answers, but only one with value.
2022-06-23 15:32:05 +03:00
Diamantis Tziotzios 2ecce0acb0 elastic conf changes 2022-06-14 14:22:59 +03:00
Bernaldo Mihasi 8b26ff19b6 Merge branch 'Development' of https://code-repo.d4science.org/MaDgiK-CITE/argos into Development 2022-06-14 10:25:53 +03:00
Bernaldo Mihasi 9c4d246ef5 heading changes on export template 2022-06-14 10:24:35 +03:00
Konstantina Galouni 772a041851 WordBuilder.java: #7837 - In exported file add comment filed as ParagraphStyle.HTML instead of ParagraphStyle.COMMENT. 2022-06-14 10:14:48 +03:00
Bernaldo Mihasi 0ac5902bfd 1. export redesign based on new word template
2. orcid researchers in export are clickable
2022-06-13 15:16:48 +03:00
Bernaldo Mihasi 73be5d9a98 1. export redesign: multiplicity #ref 7834, multiple select #ref 7836
2. fix bug in license api export
2022-06-08 16:27:47 +03:00
Bernaldo Mihasi 3433f58506 Add ssl support for elasticsearch 2022-06-08 16:23:49 +03:00
George Kalampokis 0235406246 Improve image caption styling 2022-06-07 14:52:48 +03:00
George Kalampokis 7985b13cca Add image caption on Word/Pdf export 2022-06-07 13:10:06 +03:00
George Kalampokis 54c5017609 Add Export attribute on Dataset Profile's Field. By Default is set to true. The attribute determines if the field value will be included in the word/pdf export 2022-06-07 11:00:13 +03:00
George Kalampokis 5cd79a6368 When Exporting DMP to word/pdf sort it's Datasets based on creation date 2022-06-07 10:56:44 +03:00
George Kalampokis ea8407eece Fix critical issue when uploading Dataset Template 2022-06-07 10:33:37 +03:00
Diamantis Tziotzios 91566c9710 Merge branch 'saml2' into Development 2022-06-01 10:45:19 +03:00
Konstantina Galouni 79bc95b099 [Bug fix] DatasetProfileManager.java: In method "createNewVersionDatasetProfile()", do not set label and language from oldDatasetProfile. 2022-05-31 16:51:59 +03:00
George Kalampokis e8a87765ee Fix authorization issue with Dataset Templates not showing to their original creators (that are not Admins) 2022-05-31 16:14:25 +03:00
argirok 03f7afede8 update openaire publication API to accept DOI query 2022-05-30 16:15:16 +03:00
George Kalampokis 11b0db21ac Reconfigure Zenodo prefilling query in order to query doi and conceptdoi alongside the title (ref #7802) 2022-05-30 11:59:49 +03:00
George Kalampokis 757b1f70e8 Change default filterType to remote (ref #7799 & #7800) 2022-05-26 15:03:45 +03:00
George Kalampokis 66511d2ed6 Further stability improvement over external urls query 2022-05-25 18:06:54 +03:00
George Kalampokis 0f4b209427 Add {query} field for external urls with configurable queries and make ORCID query more strict (similar to orcid's website) (ref #7798) 2022-05-25 17:37:20 +03:00
George Kalampokis 3aff6ac90e Allow to update Dataset Templates by uploading dataset Template .xml files (ref #7793) 2022-05-25 14:50:00 +03:00
Bernaldo Mihasi ff6d068ddd sign artifact resolve-code + post binding 2022-05-25 10:30:59 +03:00
George Kalampokis 912a3cc095 Order datasets on DMP listing (ref #7746) 2022-05-11 18:13:35 +03:00
Bernaldo Mihasi 6c36253f09 artifact binding + decryption of assertion 2022-05-11 10:38:10 +03:00
Bernaldo Mihasi cfd0707f2a bug fix: license api-fields didnt get prefilled 2022-05-04 11:11:25 +03:00
Bernaldo Mihasi 8ac8f9588c #7680: Support SAML Authentication 2022-04-28 12:03:01 +03:00
George Kalampokis 7c933d9f32 Refactor Zenodo deposit creation. Add model for mapping instead of relying on stringBuilder 2022-04-07 17:31:45 +03:00
George Kalampokis e373baee7e Fix critical issue when importing from xml with researchers 2022-04-07 17:31:44 +03:00
George Kalampokis 2a12f1b5be Change Dataset sorting on DMP overview and editor from last modified to last created 2022-04-05 15:29:36 +03:00
George Kalampokis ef6e3b8d7c Sort Datasets by Modified date on DMP Overview and DMP Editor 2022-04-01 13:54:13 +03:00
Bernaldo Mihasi 7cfedf24a2 add missing enums to render styles 2022-03-31 17:49:33 +03:00
Bernaldo Mihasi db8f10ac1e fix issue with upload field in xml export 2022-03-31 17:02:27 +03:00
George Kalampokis afb0be5b18 Make DMP export to be more consistent with the DMP shown on the front end UI 2022-03-29 15:13:58 +03:00
George Kalampokis c41c89774b Make Dataset Validation checker to no longer be exception depedant 2022-03-29 15:13:58 +03:00
George Kalampokis 3eb27c04f6 Fix critical issue with xml import 2022-03-29 11:32:52 +03:00
George Kalampokis 72507dd1b8 Fix issue with DMP json export if it have been imported from json 2022-03-29 10:57:06 +03:00
argirok 35ea0b5d6c Merge branch 'Development' of code-repo.d4science.org:MaDgiK-CITE/argos into Development 2022-03-29 10:32:39 +03:00
Konstantina Galouni 650e0ceb06 #7636: [Bug fix] Copy dataset from latest activity or dataset listing: Reverting some changes from commit:b6c28be3b3
1. DatasetListingModel.java: Added  field DatasetProfileOverviewModel profile, getter/setter and set profile in methods "fromDataModel()" and "toDataModel()".
2. RecentActivityModel.java: Added field DatasetProfileOverviewModel profile and getter/setter.
3. RecentDatasetModel.java: Set profile in methods "fromEntity()" and "fromDmpEntity()".
2022-03-28 17:02:57 +03:00
Bernaldo Mihasi 78895a1df1 no message 2022-03-24 09:43:13 +02:00