Claudio Atzori
4d0c59669b
merged changes from beta
2024-01-26 16:08:54 +01:00
Sandro La Bruzzo
0386f36385
Added workflow to update ORCID and replaced some parsing, because the update works and employments xml differs from the dump one.
2024-01-25 19:40:59 +01:00
Sandro La Bruzzo
43e0bba7ed
logg added during download
2024-01-23 15:04:49 +01:00
Miriam Baglioni
f7d06dc661
compilation after merging
2024-01-23 11:43:08 +01:00
Miriam Baglioni
e0ec800d7e
[BulkTagging] extend the definition of the pathMap to include also actions that should be performed of the value extracted from the result befor applying the constraint
2024-01-23 11:34:53 +01:00
Sandro La Bruzzo
e0753f19da
Fixed error of connection timeout
2024-01-13 09:27:08 +01:00
e328bc0ade
fixed missing parameter on download update
2024-01-12 16:18:20 +01:00
Miriam Baglioni
f612125939
fix issue on FoS integration. Removing the null values from FoS
2024-01-12 10:20:28 +01:00
Sandro La Bruzzo
859babf722
added some useful comment
2024-01-10 19:51:13 +01:00
Sandro La Bruzzo
8f61063201
Added workflow
2024-01-10 19:42:22 +01:00
Sandro La Bruzzo
1a42a5c10d
Implemented Download update of ORCID
2024-01-10 18:03:20 +01:00
37e36baf76
updated workflow for generation of Scholix Datasource's to use mdstore transactions
2023-12-18 16:05:35 +01:00
Miriam Baglioni
624f5f3f21
[Transformative Agreement] added check to verify the APC were paid byu the IReL funder
2023-12-18 15:28:19 +01:00
Miriam Baglioni
354e02e6a9
[Transformative Agreement] removed not needed class. Read directly the json and no need to pass from the csv
2023-12-18 15:20:27 +01:00
Miriam Baglioni
b00771c7cc
[Transformative Agreement] added code to extract relations from the transformative agreement file for the IE products got from OpenAPC
2023-12-18 15:12:44 +01:00
9d39845d1f
uploaded input parameters on CreateBaseline WF
2023-12-18 12:23:12 +01:00
15fd93a2b6
uploaded input parameters on CreateBaseline WF
2023-12-18 12:21:55 +01:00
9d342a47da
updated the transformation Baseline workflow to include mdstore rollback/commit action
2023-12-18 11:48:57 +01:00
1fbd4325f5
Merge branch 'master' of code-repo.d4science.org:D-Net/dnet-hadoop
2023-12-18 11:47:17 +01:00
1f1a6a5f5f
updated the transformation Baseline workflow to include mdstore rollback/commit action
2023-12-18 11:47:00 +01:00
Claudio Atzori
1726f49790
code formatting
2023-12-15 10:37:02 +01:00
Giambattista Bloisi
613ec5ffce
Add profiles for different spark versions: spark-24, spark-34, spark-35
2023-12-05 19:11:06 +01:00
52495f2cd2
used javax.xml.stream.XMLEventReader instead of deprecated scala.xml.pull.XMLEventReader
2023-12-05 19:11:06 +01:00
Claudio Atzori
33cb483c75
using objectSubType as originalType in Crossref2Oaf, code formatting
2023-12-01 15:03:05 +01:00
Claudio Atzori
622fafbd2e
Merge branch 'beta' into orcid_import
2023-12-01 12:28:14 +01:00
cdfb7588dd
code formatting
2023-11-30 15:31:42 +01:00
5e22b67b8a
Merge remote-tracking branch 'origin/beta' into orcid_import
2023-11-30 15:27:46 +01:00
Claudio Atzori
6f10791e77
Merge branch 'beta' into propagationapi
2023-11-30 14:20:18 +01:00
Claudio Atzori
4e1aac2e2f
resolved conflict in pom.xml before applying the changes from [COAR based resource types & Irish tender] #350
2023-11-29 14:37:52 +01:00
86b5775e08
added vocabulary in instanceTypeMapping for
...
- DOIBoost
- Datacite
- PubMed
- Scholexplorer Datasource
2023-11-29 13:15:43 +01:00
af1c2634b3
added instanceTypeMapping original field in the mapping of
...
- DOIBoost
- Datacite
- PubMed
- Scholexplorer Datasource
2023-11-29 12:45:30 +01:00
Miriam Baglioni
8eb70e6657
refactoring
2023-11-27 15:13:15 +01:00
34a4b3cbdf
Implemented ORCID Enrichment
2023-11-24 12:39:58 +01:00
Claudio Atzori
1763d377ad
code formatting
2023-11-23 16:33:24 +01:00
6ce36b3e41
Implemented ORCID Workflow on DHP-Aggregation for retrieving ORCID DUMP and generating tables
2023-11-14 12:04:29 +01:00
Claudio Atzori
8c03c41d5d
applying changes from beta
2023-11-03 12:08:39 +01:00
7e34dde774
Renaming input param for crossref input path
2023-11-02 17:47:04 +02:00
24c3f92d87
Change the description of the workflow
2023-11-02 17:46:51 +02:00
6ce9b600c1
Add actionset creation for pubmed affiliations
2023-11-02 17:46:39 +02:00
94089878fd
Adjust tests to new WF input params
2023-11-02 17:46:13 +02:00
2090003ea9
Adjust tests to new WF input params
2023-10-26 13:47:06 -07:00
a82aaf57b2
Renaming input param for crossref input path
2023-10-25 12:05:02 -07:00
aad5982bf1
Change the description of the workflow
2023-10-20 12:48:21 +03:00
6b19dcee80
Add actionset creation for pubmed affiliations
2023-10-19 19:58:25 +03:00
Claudio Atzori
a460ebe215
[UnresolvedEntities] updated action name
2023-10-10 15:50:11 +02:00
Miriam Baglioni
a431b04814
leftover for the properties and removal of bipfinder
2023-10-10 12:53:57 +02:00
Miriam Baglioni
110ce4b40f
extend the fos model to include the level4 and the scores for level3 and level4. removed bip indicators from the instance
2023-10-10 09:46:40 +02:00
Claudio Atzori
84a58802ab
[OC] using the common pid cleaning function
2023-10-06 14:48:05 +02:00
Claudio Atzori
46034630cf
[OC] compress the output actionset
2023-10-06 14:42:02 +02:00
Claudio Atzori
ee8a39e7d2
cleanup and refinements
2023-10-04 12:32:05 +02:00
Miriam Baglioni
d7fccdc64b
fixed paths in wf to match the req of the pathname
2023-10-02 14:10:57 +02:00
Miriam Baglioni
9898470b0e
Addressing comments in #340 \#issuecomment-10592
2023-10-02 12:54:16 +02:00
Miriam Baglioni
e84f5b5e64
extended existing codo to accomodate import of POCI from open citation
2023-10-02 09:25:16 +02:00
9c3ab11d5b
Merge branch 'master' of code-repo.d4science.org:D-Net/dnet-hadoop
2023-09-25 15:29:19 +02:00
423ef30676
minor fix on the aggregation of uniprot and pdb
2023-09-25 15:28:58 +02:00
Claudio Atzori
4786aa0e09
added Archive ouverte UNIGE (ETHZ.UNIGENF, opendoar____::1400) to the Datacite hostedBy_map
2023-09-07 11:21:07 +02:00
Claudio Atzori
265180bfd2
added Archive ouverte UNIGE (ETHZ.UNIGENF, opendoar____::1400) to the Datacite hostedBy_map
2023-09-07 11:20:35 +02:00
Claudio Atzori
15666e86a8
added collectedfrom to the affiliation relations imported from Crossref
2023-09-04 15:56:06 +02:00
7de0164c26
Fix import of affiliations relations from Crossref
2023-09-04 16:04:41 +03:00
Miriam Baglioni
9c8b41475a
Merge pull request '8172_impact_indicators_workflow' ( #284 ) from 8172_impact_indicators_workflow into beta
...
Reviewed-on: #284
2023-08-14 15:50:48 +02:00
97c1ba8918
Merge actionsets of results and projects
2023-08-11 15:56:53 +03:00
7cefe2665b
Remove unnecessary classes
2023-07-28 19:14:39 +03:00
26a92ce762
Merge branch '8876' of https://code-repo.d4science.org/D-Net/dnet-hadoop into 8876
2023-07-28 19:03:57 +03:00
ebfba38ab6
Add changes from code review
2023-07-28 19:03:47 +03:00
Serafeim Chatzopoulos
eb8684a8cf
Merge branch 'beta' into 8876
2023-07-28 13:39:33 +02:00
Giambattista Bloisi
e64c2854a3
Refactor Dedup process to use Spark Dataframe API and intermediate representation with Row interface
...
JsonPath cache contention fixed by using a ConcurrentHashMap
Blacklist filtering performance improvement
Minor performance improvements when evaluating similarity
Sorting in clustered elements is deterministic (by ordering and identity field, instead of ordering field only)
2023-07-24 15:36:24 +02:00
Giambattista Bloisi
bb5b845e3c
Use scala.binary.version property to resolve scala maven dependencies
...
Ensure consistent usage of maven properties
Profile for compiling with scala 2.12 and Spark 3.4
2023-07-24 11:13:48 +02:00
2cc5b1a39b
Fixes in workflow.xml
2023-07-21 15:26:50 +03:00
be320ba3c1
Indentation fixes
2023-07-17 16:04:21 +03:00
bc1a4611aa
Minor changes
2023-07-17 11:17:53 +03:00
4eba14a80e
Add oozie workflow
2023-07-06 21:07:50 +03:00
c2998a14e8
Add basic tests for affiliation relations
2023-07-06 20:28:16 +03:00
bc7b00bcd1
Add bi-directional affiliation relations
2023-07-06 18:29:15 +03:00
12528ed2ef
Refactor PrepareAffiliationRelations.java to use OafMapperUtils common functions
2023-07-06 18:08:33 +03:00
bbc245696e
Prepare actionsets for BIP affiliations
2023-07-06 15:56:12 +03:00
347a889b20
Read affiliation relations
2023-07-06 00:51:01 +03:00
Miriam Baglioni
4c9bc4c3a5
refactoring
2023-06-30 19:05:15 +02:00
Miriam Baglioni
7738372125
[UsageCount] fixed typo in attribute name for datasource table
2023-06-30 18:56:41 +02:00
Miriam Baglioni
55ea485783
[UsageCount] split the count for result at the level of the datasource. for each indicator one unit is specified for each datasource contrinuting to that indicator value. The datasource key is the value of the key element in the unit for the measure, while the count for that datasource is in the value
2023-06-30 18:39:30 +02:00
Michele Artini
88a1cbc37d
fixed a datasource id
2023-06-22 07:56:33 +02:00
Michele Artini
009d7f312f
fixed a datasource Id
2023-06-21 16:17:34 +02:00
Alessia Bardi
d5be6a13e9
Updated officialnmae of pangaea in hostedbymap for Datacite to avoid duplicate entries in the source filter of the portal
2023-06-06 14:43:32 +02:00
Alessia Bardi
118e72d7db
Updated officialnmae of pangaea in hostedbymap for Datacite to avoid duplicate entries in the source filter of the portal
2023-06-06 14:39:12 +02:00
Claudio Atzori
db625e548d
[UsageCount] addition of usagecount for Projects and datasources
2023-05-22 15:00:46 +02:00
Claudio Atzori
8acad52a0c
Merge branch 'beta' into apc_affiliation
2023-05-15 15:47:33 +02:00
Claudio Atzori
8a463cc3e8
fixed organization id created when mapping APC affiliations. Factored out ROR constants in dhp-common
2023-05-15 15:44:46 +02:00
Miriam Baglioni
78b07400c0
changed test classes
2023-05-15 11:37:08 +02:00
Miriam Baglioni
86fe886c1a
removed the inverse of the Citing relation
2023-05-15 11:20:51 +02:00
815a4ddbba
Add actionset creation for project bip indicators in workflow
2023-04-26 20:40:06 +03:00
ee04cf92bf
Add actionsets for project impact indicators
2023-04-26 20:23:46 +03:00
Claudio Atzori
24e2fd828b
code formatting
2023-03-08 21:17:08 +01:00
Miriam Baglioni
0fff98a14c
[ECclassification] removed print
2023-03-02 11:46:57 +01:00
Miriam Baglioni
b0c2f7e526
[ECclassification] removed not needed resources
2023-03-02 11:44:48 +01:00
Miriam Baglioni
d4fc62c2f6
mergin with branch beta
2023-03-02 11:14:54 +01:00
Miriam Baglioni
de8ad1caef
[ECclassification] new implementation for the H2020 classification
2023-03-02 11:14:03 +01:00
Miriam Baglioni
c1f9848953
[ECclassification] added new classes
2023-03-01 15:29:11 +01:00
Claudio Atzori
16ad42e8f3
code formatting
2023-03-01 10:22:13 +01:00
Miriam Baglioni
4f2df876cd
[ECclassification] new implementation first try
2023-02-28 14:44:00 +01:00
Claudio Atzori
2f7346e9cf
WIP monodirectional citations, Datacite
2023-02-28 13:30:51 +01:00
Claudio Atzori
7aebedb43c
code formatting
2023-02-27 11:51:27 +01:00
Miriam Baglioni
80987801d7
[FoS] added check for null on level1 subject
2023-02-27 11:40:22 +01:00
Claudio Atzori
31e97c2a6b
[unresolved entities] updated oozie wf node labels
2023-02-27 11:38:29 +01:00
Miriam Baglioni
23112929e9
[FoS] changed the default separator from comma to tab to solve the issue in subject value split
2023-02-27 10:18:39 +01:00
Claudio Atzori
0c1be41b30
code formatting
2023-02-22 10:15:25 +01:00
Claudio Atzori
477a7c416f
Merge branch 'beta' into UsageCountOnProjectAndDatasource
2023-02-22 09:55:51 +01:00
Miriam Baglioni
016337a0f9
Merge branch 'beta' of https://code-repo.d4science.org/D-Net/dnet-hadoop into beta
2023-02-16 15:54:59 +01:00
Claudio Atzori
9a03f71db1
code formatting
2023-02-13 16:25:47 +01:00
Miriam Baglioni
32870339f5
refactoring after compile
2023-02-13 13:06:48 +01:00
Miriam Baglioni
7184cc0804
[FoS] added check for null on level1 subject
2023-02-13 13:03:49 +01:00
Miriam Baglioni
5cf902a2b0
[UsageCount] changed query to make the sum be computed via sql instead of grouping
2023-02-10 16:16:37 +01:00
Miriam Baglioni
f803530df6
[UsageCount] fixed query
2023-02-10 15:50:56 +01:00
Miriam Baglioni
7473093c84
[FoS] changed the default separator from comma to tab to solve the issue in subject value split
2023-02-10 15:34:52 +01:00
Miriam Baglioni
bb5bba51b3
[UsageCount] extended test
2023-02-09 19:08:30 +01:00
Miriam Baglioni
85e53fad00
[UsageCount] addition of usagecount for Projects and datasources. Extention of the action set created for the results with new entities for projects and datasources. Extention of the resource set and modification of the testing class
2023-02-09 18:59:45 +01:00
Claudio Atzori
f86e19b282
code formatting
2023-01-11 09:53:19 +01:00
Michele Artini
7b7520850b
fixed an invalid char
2023-01-11 09:22:18 +01:00
Michele Artini
4953ae5649
fixed an invalid char
2023-01-11 08:35:53 +01:00
3c9826f186
updated lines function to it's implementation linesWithSeparators.map(l => l.stripLineEnd) in this way we force scala plugin compiler to consider this pipeline scala code and not java.string.lines() pipeline
2022-12-21 11:21:17 +01:00
91c70b15a5
updated lines function to it's implementation linesWithSeparators.map(l => l.stripLineEnd) in this way we force scala plugin compiler to consider this pipeline scala code and not java.string.lines() pipeline
2022-12-21 11:14:42 +01:00
Sandro La Bruzzo
72f0d88d6c
formatted code
2022-10-19 14:18:42 +02:00
a1f94530a3
added documentation
2022-10-13 11:47:11 +02:00
Claudio Atzori
f3f7604e6c
trying to fix a test that fails only on Jenkins
2022-09-27 15:21:37 +02:00
Claudio Atzori
27a91841e7
WIP: cleaning of subjects
2022-08-04 11:39:39 +02:00
Claudio Atzori
eb53b52f7c
code formatting
2022-08-02 13:24:47 +02:00
Claudio Atzori
209c7e9dab
[datacite] avoid UnsupportedOperationException
2022-08-01 09:05:35 +02:00
Claudio Atzori
92e48f12f7
[metadata collection] updated collector plugin name
2022-07-29 13:54:00 +02:00
Claudio Atzori
f62c4e05cd
code formatting
2022-07-29 11:56:01 +02:00
Claudio Atzori
ed98a6d9d0
[Datacite mapping] include the older datacite prefixed OpenAIRE id among the originalId[]
2022-07-28 10:15:14 +02:00
67525076ec
fixed test, now it compiles after commit a6977197b3
2022-07-26 15:35:17 +02:00
Claudio Atzori
d43663d30f
adapted RorActionSet test, it should not create parent/child rels
2022-07-25 17:54:10 +02:00
Claudio Atzori
c3ede1b379
Merge branch 'beta' into pubmed_update
2022-07-25 14:10:22 +02:00
Claudio Atzori
1138b2ac8e
code formatting
2022-07-19 14:15:49 +02:00
00168303db
Added unit test to verify the generation in the OriginalID the old openaire Identifier generated by OAI
2022-07-14 10:19:59 +02:00
0a4f4d98fa
added PMCId to PmArticle
2022-07-13 15:27:17 +02:00
Claudio Atzori
0cb1c70788
code formatting
2022-07-01 10:44:08 +02:00
Claudio Atzori
929b145130
code formatting
2022-06-21 23:07:06 +02:00
Claudio Atzori
06b5533d4c
Merge branch 'beta' into 7096-fileGZip-collector-plugin
2022-06-16 09:22:16 +02:00
Alessia Bardi
88d531dc91
exclude FAIRsharing records from Datacite
2022-06-13 16:17:17 +02:00
Claudio Atzori
b8cda65487
code formatting
2022-06-13 09:20:03 +02:00
Michele Artini
634869ce95
deleted hierarchical rels from ror action set
2022-06-13 09:12:21 +02:00
Michele Artini
b94a791bc5
unit tests to transform cnr explora
2022-06-09 12:25:34 +02:00
Claudio Atzori
d098ad0d93
[hb patch] updated map
2022-05-16 15:54:04 +02:00
Claudio Atzori
1dda11e031
[hb patch] updated map
2022-05-16 15:53:27 +02:00
Claudio Atzori
8dd5517548
code formatting
2022-05-16 14:35:24 +02:00
Michele Artini
46c07e0724
deleted hierarchical rels from ror action set
2022-05-16 09:39:54 +02:00
Miriam Baglioni
89657a0b78
[UsageCount] refactoring
2022-05-09 14:43:27 +02:00
Miriam Baglioni
a056f59c6e
[UsageCount] make it as an action set as it should be, plus changed the test to make them work as well now
2022-05-09 12:51:35 +02:00
623f7be26d
Fix reading files from HDFS in FileCollector & FileGZipCollector plugins
2022-04-28 16:31:11 +03:00
Claudio Atzori
30105f0722
Merge branch 'beta' into 7096-fileGZip-collector-plugin
2022-04-22 11:22:21 +02:00
Miriam Baglioni
20de75ca64
[Measures] removed typo
2022-04-21 12:14:03 +02:00
Miriam Baglioni
b61efd613b
[Measures] addressed comments in the PR
2022-04-21 12:09:37 +02:00
Claudio Atzori
eabb40fccc
Merge branch 'beta' into 7096-fileGZip-collector-plugin
2022-04-21 11:42:43 +02:00
Miriam Baglioni
c304657d91
[Measures] put the logic in common, no need to change the schema
2022-04-21 11:27:26 +02:00
Miriam Baglioni
5295effc96
[Measures] fixed issue
2022-04-20 16:20:40 +02:00
Miriam Baglioni
5feae77937
[Measures] last changes to accomodate tests
2022-04-20 15:13:09 +02:00
Miriam Baglioni
869407c6e2
[Measures] added new measure (usagecounts) as action set. Measure added at the level of the result. Ref #7587
2022-04-20 14:02:05 +02:00
d0b84d3297
Add FileCollectorPlugin and respective test
2022-04-07 15:06:38 +03:00
bc1bf55507
Add AbstractSplittedRecordPlugin
2022-04-07 14:33:04 +03:00
Claudio Atzori
c26222623f
[maven-release-plugin] prepare for next development iteration
2022-04-07 13:32:22 +02:00
Claudio Atzori
86585a6b27
[maven-release-plugin] prepare release dhp-1.2.4
2022-04-07 13:32:19 +02:00
Claudio Atzori
ad85d88eaf
[maven-release-plugin] rollback the release of dhp-1.2.4
2022-04-07 13:28:35 +02:00
Claudio Atzori
598e11dfd7
[maven-release-plugin] prepare for next development iteration
2022-04-07 13:27:02 +02:00
Claudio Atzori
db3d9877a5
[maven-release-plugin] prepare release dhp-1.2.4
2022-04-07 13:26:58 +02:00
Claudio Atzori
3bba6d6e38
[maven-release-plugin] rollback the release of dhp-1.2.4
2022-04-07 12:23:17 +02:00
Claudio Atzori
2ac2d928bd
[maven-release-plugin] prepare for next development iteration
2022-04-07 12:18:47 +02:00
Claudio Atzori
85bc722ff4
[maven-release-plugin] prepare release dhp-1.2.4
2022-04-07 12:18:43 +02:00
Claudio Atzori
bc05b6168a
[maven-release-plugin] rollback the release of dhp-1.2.4
2022-04-07 11:49:06 +02:00
Claudio Atzori
505420fd61
[maven-release-plugin] prepare for next development iteration
2022-04-07 11:34:06 +02:00
Claudio Atzori
66e718981e
[maven-release-plugin] prepare release dhp-1.2.4
2022-04-07 11:34:02 +02:00
e612489670
Add fileGZip collector plugin and respective test
2022-04-06 19:12:44 +03:00
Claudio Atzori
8c457f1b2c
conflicts resolved, merged from beta
2022-04-06 10:27:52 +02:00
Miriam Baglioni
e77d104951
[OC] added / to workflow path
2022-04-05 15:07:11 +02:00
Sandro La Bruzzo
1b11010169
minor fix
2022-03-29 10:59:14 +02:00
Claudio Atzori
a87c070447
conflicts resolved, merged from beta
2022-02-24 12:51:31 +01:00
Claudio Atzori
5226d0a100
Merge branch 'beta' of https://code-repo.d4science.org/D-Net/dnet-hadoop into beta
2022-02-18 15:21:07 +01:00
Claudio Atzori
401dd38074
code formatting
2022-02-18 15:19:15 +01:00
Sandro La Bruzzo
891781ee3f
Merge branch 'beta' of code-repo.d4science.org:D-Net/dnet-hadoop into beta
2022-02-18 11:11:32 +01:00
Sandro La Bruzzo
d3f03abd51
fixed wrong json path
2022-02-18 11:11:17 +01:00
Claudio Atzori
89c7313fc5
Merge branch 'beta' into hierarchical_orgs_relations
2022-02-17 10:30:04 +01:00
Sandro La Bruzzo
3aa2020b24
added script to regenerate hostedBy Map following instruction defined on ticket #7539
...
updated hosted By Map
2022-02-15 11:05:27 +01:00
Miriam Baglioni
be64055cfe
[OpenCitation] changed the name of destination folders
2022-02-14 15:49:44 +01:00
Miriam Baglioni
1490867cc7
[OpenCitation] cleaning of the COCI model
2022-02-14 14:52:12 +01:00
Miriam Baglioni
5c4043dba8
[OpenCitation] refactoring
2022-02-08 16:23:05 +01:00
Miriam Baglioni
759ed519f2
[OpenCitation] added logic to avoid the genration of self citations relations
2022-02-08 16:15:34 +01:00
Miriam Baglioni
b071f8e415
[OpenCitation] change to extract in json format each folder just onece
2022-02-08 15:37:28 +01:00
Miriam Baglioni
fbc28ee8c3
[OpenCitation] change the integration logic to consider dois with commas inside
2022-02-07 18:32:08 +01:00
Miriam Baglioni
493caef358
[stats-wf]fixed the result_result table related to PR#191
2022-02-04 14:51:25 +01:00
Miriam Baglioni
73eba34d42
[UnresolvedEntities] Changed the way to merge the unresolved because the new merge removed the dataInfo from the merged result. Added also data info for subjects
2022-02-01 08:38:41 +01:00
Claudio Atzori
b37bc277c4
reintroduced the hostedby patching to the datacite records
2022-01-21 09:15:13 +01:00
Miriam Baglioni
a75fb8c47a
[BipFinderInstanceLevel] change pom to align to the dhp-schema release 2.10.24 and refactoring
2022-01-12 18:06:26 +01:00
Miriam Baglioni
e7d5a39c03
[BipFinderInstanceLevel] added tests in test class
2022-01-12 17:25:04 +01:00
Miriam Baglioni
4993666d73
[BipFinderInstanceLevel] changed creation of the instance to allow to enrich existing instances with same pid
2022-01-12 16:53:47 +01:00
Sandro La Bruzzo
57e2c4b749
formatted code
2022-01-12 09:40:28 +01:00
Claudio Atzori
dcd282977c
pulled from beta
2022-01-11 16:59:41 +01:00
Claudio Atzori
4f212652ca
scalafmt: code formatting
2022-01-11 16:57:48 +01:00
Miriam Baglioni
b7e450070b
[SDG-FOS] to import SDG file not considering the header
2022-01-07 12:13:26 +01:00
Miriam Baglioni
639190370a
mergin with branch beta
2022-01-07 11:29:25 +01:00
Miriam Baglioni
adccc2346a
[SDG-FOS] to lower case for the doi
2022-01-07 11:28:50 +01:00
Claudio Atzori
3bd3653be9
OAF-store-graph mdstores: save them in text format
2022-01-04 16:39:39 +01:00
Claudio Atzori
3dc48c7ab5
OAF-store-graph mdstores: save them in text format
2022-01-04 16:39:27 +01:00
Claudio Atzori
f82db765db
OAF-store-graph mdstores: save them in text format
2022-01-04 16:39:15 +01:00
Claudio Atzori
9458ee7938
serialise records in the OAF-store-graph mdstores in json format. Read them again in the graph construction phase using a tolerant parser to support backward compatible changes in the evolution of the schema
2022-01-04 16:38:09 +01:00
Claudio Atzori
58f8998e3d
OAF-store-graph mdstores: save them in text format
2022-01-04 15:02:09 +01:00
Claudio Atzori
174c3037e1
OAF-store-graph mdstores: save them in text format
2022-01-04 14:40:16 +01:00
Claudio Atzori
045d767013
OAF-store-graph mdstores: save them in text format
2022-01-04 14:23:01 +01:00
Claudio Atzori
a6977197b3
serialise records in the OAF-store-graph mdstores in json format. Read them again in the graph construction phase using a tolerant parser to support backward compatible changes in the evolution of the schema
2022-01-03 17:25:26 +01:00
Miriam Baglioni
92fd69e25d
[SDG-FOS] alternative way to get input data to avoid OOM error while getting csv
2022-01-03 15:23:06 +01:00
Miriam Baglioni
7a1b440413
[SDG] logic to create unresolved entities out of SDG input. This changes also some classes related to FOS to reuse the same code. The code under createunresolvedentities create results with the merged update of the the inputs provided (bip at the level of the isntance, fos and sdg for subjects)
2021-12-23 13:24:28 +01:00
Miriam Baglioni
2a67ee13ec
[SDG] added model class
2021-12-23 10:37:52 +01:00
Miriam Baglioni
10579c0dd0
[FOS]fixed doi value in test
2021-12-22 23:10:16 +01:00
Miriam Baglioni
6116fc5d40
[FOS]added logic to include only different subjects. Test refactoring and extention
2021-12-22 23:04:22 +01:00
Miriam Baglioni
b81efb6a9d
[FOS]changed the mapping between the csv and the model. Changed Test classes and resources
2021-12-22 21:40:35 +01:00
Miriam Baglioni
de6c4c8968
[FOS]creation of the unresolved entities: remove the split for the doi: no more needed since each row is related to one doi
2021-12-22 16:44:44 +01:00
Miriam Baglioni
34ac56565d
refactoring
2021-12-22 16:28:11 +01:00
Miriam Baglioni
20ef1d657f
refactoring
2021-12-22 16:26:36 +01:00
Miriam Baglioni
813f856d3f
[BipFinder] removing left over parameter in wf
2021-12-22 16:11:12 +01:00
Miriam Baglioni
2c126ed014
[BipFinder] create unresolved entities with measures at the level of the instance
2021-12-22 16:03:41 +01:00
Miriam Baglioni
0807fdb65a
[BipFinder] remove not needed resources
2021-12-22 15:37:00 +01:00
Miriam Baglioni
b5e11a3a0a
[BipFinder] put in common package BipFinder model
2021-12-22 15:33:05 +01:00
Miriam Baglioni
c5739c4266
[BipFinder] create action set for the measures at the level of the result
2021-12-22 15:08:33 +01:00
Miriam Baglioni
e24a7f3496
mergin with branch beta
2021-12-21 13:57:19 +01:00
Miriam Baglioni
d1ae219cb4
Merge branch 'beta' of https://code-repo.d4science.org/D-Net/dnet-hadoop into beta
2021-12-21 13:55:53 +01:00
Sandro La Bruzzo
3920d68992
Fixed workflow generation of delta in datacite
2021-12-21 11:41:49 +01:00
Sandro La Bruzzo
b881ee5ef8
[scholexplorer]
...
- implemented generation of scholix of delta update of datacite
2021-12-15 11:25:32 +01:00
Miriam Baglioni
22d4b5619b
[BipFinder Result] last changes to test and resources files
2021-12-14 14:54:13 +01:00
Miriam Baglioni
6fb6236cd4
changed the way to produce the AS for bipFinder.
2021-12-14 14:51:14 +01:00
Miriam Baglioni
4eb8276493
-
2021-12-14 11:12:17 +01:00
Miriam Baglioni
b113586207
resolved conflicts
2021-12-07 10:16:14 +01:00
Miriam Baglioni
d9836f0cf3
[OpenCitations] fixed test when executed one after the other
2021-12-06 15:27:09 +01:00
Sandro La Bruzzo
7af0bbd0b1
[scala-refactor] Module dhp-aggregation:
...
Moved all scala source into src/main/scala and src/test/scala
2021-12-06 11:26:36 +01:00
Miriam Baglioni
f430688ff7
Merge branch 'beta' of https://code-repo.d4science.org/D-Net/dnet-hadoop into beta
2021-12-03 12:36:08 +01:00
Sandro La Bruzzo
f7011b90d8
format code
2021-12-03 11:15:09 +01:00
Miriam Baglioni
87eedad898
-
2021-12-02 13:17:19 +01:00
Sandro La Bruzzo
feea154e89
remove working dir after test
2021-11-25 11:02:38 +01:00
Sandro La Bruzzo
028a8acad8
add test resources
2021-11-25 10:54:47 +01:00
Sandro La Bruzzo
2164a2a889
Datacite: Code Refactor generated a general SparkApplication Scala where all the spark scala have to inherit
...
Commented a little the Datacite transformation code
2021-11-25 10:54:13 +01:00
Sandro La Bruzzo
a7cf277d98
Datacite: Removed HostedBy Patch as described on ticket #7219 , Now all the records will have hosted by Unknown Repository
2021-11-22 16:03:17 +01:00
Sandro La Bruzzo
fc03c99805
fixed javadocs url after deploying site
2021-11-19 10:46:33 +01:00
Claudio Atzori
bd9a43cefd
Revert to 4094f2bb9a
2021-11-19 09:20:43 +01:00
Claudio Atzori
3a4d925386
Merge branch 'beta' into hierarchical_orgs_relations
2021-11-18 18:07:08 +01:00
Sandro La Bruzzo
2506d7a679
Merge branch 'mvn_site_documentation' of code-repo.d4science.org:D-Net/dnet-hadoop into mvn_site_documentation
2021-11-17 11:07:24 +01:00
Sandro La Bruzzo
cded363b55
code refactor, created and moved scala code on the correct maven folder under src/main/scala and src/test/scala
2021-11-17 11:06:35 +01:00
Miriam Baglioni
4094f2bb9a
added integration md file
2021-11-17 10:04:52 +01:00
Miriam Baglioni
ec8b0219ff
[Documentation] Added first page for Integration via unresolved entities generation
2021-11-16 17:41:34 +01:00
Sandro La Bruzzo
2d67020c59
added dhp-enrichment maven site template
2021-11-16 16:01:08 +01:00
Claudio Atzori
bafa2990f3
code formatting
2021-11-15 17:07:16 +01:00
Sandro La Bruzzo
efa09057db
Merge branch 'beta' of code-repo.d4science.org:D-Net/dnet-hadoop into beta
2021-11-15 14:32:09 +01:00
Sandro La Bruzzo
48923e46a1
added documentation to Pubmed Class and also added mvn site for dhp-aggregations
2021-11-15 14:32:01 +01:00
Miriam Baglioni
4ec88c718c
merge with beta - resolved conflict in pom
2021-11-15 10:52:16 +01:00
Miriam Baglioni
6f1a434e90
[Bypass Action Set] Fixed test to consider the new identifier utils
2021-11-15 09:59:23 +01:00
Claudio Atzori
Sandro La Bruzzo
Miriam Baglioni
sandro.labruzzo
Sandro La Bruzzo
Giambattista Bloisi
Serafeim Chatzopoulos
Serafeim Chatzopoulos
Michele Artini
Alessia Bardi