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8172_impact_indicators_workflow #284

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miriam.baglioni merged 49 commits from 8172_impact_indicators_workflow into beta 2023-08-14 15:50:48 +02:00
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schatz commented 2023-03-23 12:08:56 +01:00
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This PR adds an Oozie workflow for the calculation of impact indicators using https://github.com/athenarc/Bip-Ranker in graph provision.

This PR adds an Oozie workflow for the calculation of impact indicators using https://github.com/athenarc/Bip-Ranker in graph provision.
claudio.atzori was assigned by schatz 2023-03-23 12:08:56 +01:00
schatz added 8 commits 2023-03-23 12:08:56 +01:00
schatz added 1 commit 2023-04-07 15:30:20 +02:00
schatz added 3 commits 2023-04-26 19:40:15 +02:00
schatz added 1 commit 2023-04-27 11:37:20 +02:00
ilias.kanellos added 2 commits 2023-04-28 12:32:21 +02:00
ilias.kanellos added 1 commit 2023-04-28 12:45:39 +02:00
ilias.kanellos added 1 commit 2023-05-11 13:43:42 +02:00
ilias.kanellos added 1 commit 2023-05-11 14:37:41 +02:00
ilias.kanellos added 1 commit 2023-05-12 11:56:09 +02:00
schatz added 1 commit 2023-05-15 12:04:47 +02:00
ilias.kanellos added 1 commit 2023-05-15 14:25:21 +02:00
schatz added 2 commits 2023-05-15 14:53:16 +02:00
schatz added 1 commit 2023-05-15 15:20:30 +02:00
schatz added 1 commit 2023-05-15 16:52:23 +02:00
schatz added 1 commit 2023-05-15 18:55:38 +02:00
schatz added 1 commit 2023-05-15 21:28:52 +02:00
schatz added 1 commit 2023-05-16 13:40:10 +02:00
schatz added 1 commit 2023-05-16 15:28:52 +02:00
ilias.kanellos added 3 commits 2023-05-16 16:35:30 +02:00
ilias.kanellos added 1 commit 2023-05-23 15:44:18 +02:00
ilias.kanellos added 1 commit 2023-05-23 15:49:16 +02:00
ilias.kanellos added 1 commit 2023-05-23 16:17:25 +02:00
schatz added 1 commit 2023-06-23 11:51:55 +02:00
ilias.kanellos added 3 commits 2023-07-06 14:07:08 +02:00
schatz added 1 commit 2023-07-18 17:38:31 +02:00
ilias.kanellos added 2 commits 2023-07-21 12:43:34 +02:00
schatz added 2 commits 2023-07-21 14:27:21 +02:00
schatz added 1 commit 2023-07-21 15:07:13 +02:00
ilias.kanellos added 2 commits 2023-07-21 16:43:19 +02:00
schatz added 1 commit 2023-07-21 16:55:45 +02:00
schatz changed title from WIP: 8172_impact_indicators_workflow to 8172_impact_indicators_workflow 2023-07-25 11:50:43 +02:00
schatz commented 2023-07-25 11:55:05 +02:00
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The workflow has been successfully tested and is ready to be merged.
It first calculates the impact indicators for results producing the relevant action sets, and then aggregates those indicators for projects, also producing appropriate action sets.

Since,the performance of this WF was discussed in the past, I attach the execution times using the last prod graph (v6.0.0).

The workflow has been successfully tested and is ready to be merged. It first calculates the impact indicators for results producing the relevant action sets, and then aggregates those indicators for projects, also producing appropriate action sets. Since,the performance of this WF was discussed in the past, I attach the execution times using the last prod graph (v6.0.0).
Screenshot 2023-07-25 at 12.45.19 PM.png
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Screenshot 2023-07-25 at 12.56.25 PM.png
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Screenshot 2023-07-25 at 12.45.19 PM.png Screenshot 2023-07-25 at 12.56.25 PM.png
schatz requested review from claudio.atzori 2023-07-25 11:55:16 +02:00
schatz requested review from miriam.baglioni 2023-07-25 11:55:23 +02:00
claudio.atzori requested review from giambattista.bloisi 2023-07-28 10:59:01 +02:00
miriam.baglioni commented 2023-08-07 16:03:59 +02:00
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I see you are creating two different action sets: one for projects and one fro results.
We already have an action set to store the update related to the computation of the impact indicators, you should use the same for both projects and results.

It seems they are not two distinct action sets, but that you are changing the destination directory for the same AS adding in one case /result and in the other case /project to the path you should use to store the files.

You should avoid doing it. The action sets are associated to profiles on the aggregator. This profiles are updated each time the action set is generated. The profile specifies the association between the last update for the action set and the directory that stores the update.
When the AS in included in the graph, the directory where to search for the files is the one specified in the profile.

~~I see you are creating two different action sets: one for projects and one fro results. We already have an action set to store the update related to the computation of the impact indicators, you should use the same for both projects and results.~~ It seems they are not two distinct action sets, but that you are changing the destination directory for the same AS adding in one case /result and in the other case /project to the path you should use to store the files. You should avoid doing it. The action sets are associated to profiles on the aggregator. This profiles are updated each time the action set is generated. The profile specifies the association between the last update for the action set and the directory that stores the update. When the AS in included in the graph, the directory where to search for the files is the one specified in the profile.
miriam.baglioni changed title from 8172_impact_indicators_workflow to WIP: 8172_impact_indicators_workflow 2023-08-07 16:23:52 +02:00
schatz added 1 commit 2023-08-11 14:56:59 +02:00
schatz changed title from WIP: 8172_impact_indicators_workflow to 8172_impact_indicators_workflow 2023-08-11 14:57:34 +02:00
schatz commented 2023-08-11 14:58:46 +02:00
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Just updated the code to store the action sets for projects and results in the same file.

Just updated the code to store the action sets for projects and results in the same file.
giambattista.bloisi commented 2023-08-11 16:33:11 +02:00
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The changes in SparkAtomicActionScoreJob seem to break the other existing workflow using it (dhp-workflows/dhp-aggregation/src/main/resources/eu/dnetlib/dhp/actionmanager/bipfinder/oozie_app/workflow.xml)

The changes in SparkAtomicActionScoreJob seem to break the other existing workflow using it (dhp-workflows/dhp-aggregation/src/main/resources/eu/dnetlib/dhp/actionmanager/bipfinder/oozie_app/workflow.xml)
miriam.baglioni commented 2023-08-11 17:03:54 +02:00
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I think we can remove that workflow, since this implementation should replace the old asynchronous one

I think we can remove that workflow, since this implementation should replace the old asynchronous one
schatz commented 2023-08-11 17:46:00 +02:00
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I think we can remove that workflow, since this implementation should replace the old asynchronous one

yes, I was thinking the same, but to be on the safe side, I will adapt this workflow in case it is needed.

> I think we can remove that workflow, since this implementation should replace the old asynchronous one > yes, I was thinking the same, but to be on the safe side, I will adapt this workflow in case it is needed.
miriam.baglioni commented 2023-08-14 15:50:37 +02:00
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As agreed with Serafeim, I will merge this PR and the changes to the other related WF (if not removed) will be done in afterwards.

As agreed with Serafeim, I will merge this PR and the changes to the other related WF (if not removed) will be done in afterwards.
miriam.baglioni merged commit 9c8b41475a into beta 2023-08-14 15:50:48 +02:00
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