D-Net
/
dnet-hadoop
14
5
Fork 11
Code Issues 14 Pull Requests 10 Projects 2 Releases 2 Wiki Activity

added vocabulary in instanceTypeMapping for 

- DOIBoost
- Datacite
- PubMed
- Scholexplorer Datasource
This commit is contained in:
Sandro La Bruzzo 2023-11-29 13:15:43 +01:00
parent c96ff54b45
commit 86b5775e08
4 changed files with 10 additions and 0 deletions
Show Stats Download Patch File Download Diff File Expand all files Collapse all files

2
dhp-workflows/dhp-aggregation/src/main/scala/eu/dnetlib/dhp/datacite/DataciteToOAFTransformation.scala
View File

@ -225,8 +225,10 @@ object DataciteToOAFTransformation {
// ADD ORIGINAL TYPE
val itm = new InstanceTypeMapping
itm.setOriginalType(typeQualifiers._3)
itm.setVocabularyName(ModelConstants.OPENAIRE_COAR_RESOURCE_TYPES_3_1)
i.setInstanceTypeMapping(List(itm).asJava)
typeQualifiers._2.getClassname match {
case "dataset" =>
val r = new OafDataset

5
dhp-workflows/dhp-aggregation/src/main/scala/eu/dnetlib/dhp/sx/bio/BioDBToOAF.scala
View File

@ -187,6 +187,7 @@ object BioDBToOAF {
)
val itm = new InstanceTypeMapping
itm.setOriginalType(input.pidType)
itm.setVocabularyName(ModelConstants.OPENAIRE_COAR_RESOURCE_TYPES_3_1)
i.setInstanceTypeMapping(List(itm).asJava)
} else {
i.setInstancetype(
@ -199,6 +200,7 @@ object BioDBToOAF {
)
val itm = new InstanceTypeMapping
itm.setOriginalType("Bioentity")
itm.setVocabularyName(ModelConstants.OPENAIRE_COAR_RESOURCE_TYPES_3_1)
i.setInstanceTypeMapping(List(itm).asJava)
}
@ -274,6 +276,7 @@ object BioDBToOAF {
)
val itm = new InstanceTypeMapping
itm.setOriginalType("Bioentity")
itm.setVocabularyName(ModelConstants.OPENAIRE_COAR_RESOURCE_TYPES_3_1)
i.setInstanceTypeMapping(List(itm).asJava)
i.setCollectedfrom(collectedFromMap("uniprot"))
@ -483,6 +486,7 @@ object BioDBToOAF {
)
val itm = new InstanceTypeMapping
itm.setOriginalType("Bioentity")
itm.setVocabularyName(ModelConstants.OPENAIRE_COAR_RESOURCE_TYPES_3_1)
i.setInstanceTypeMapping(List(itm).asJava)
i.setCollectedfrom(collectedFromMap("pdb"))
@ -586,6 +590,7 @@ object BioDBToOAF {
)
val itm = new InstanceTypeMapping
itm.setOriginalType("Bioentity")
itm.setVocabularyName(ModelConstants.OPENAIRE_COAR_RESOURCE_TYPES_3_1)
i.setInstanceTypeMapping(List(itm).asJava)

2
dhp-workflows/dhp-aggregation/src/main/scala/eu/dnetlib/dhp/sx/bio/pubmed/PubMedToOaf.scala
View File

@ -191,6 +191,7 @@ object PubMedToOaf {
// ADD ORIGINAL TYPE to the publication
val itm = new InstanceTypeMapping
itm.setOriginalType(ja.get.getValue)
itm.setVocabularyName(ModelConstants.OPENAIRE_COAR_RESOURCE_TYPES_3_1)
pubmedInstance.setInstanceTypeMapping(List(itm).asJava)
} else {
val i_type = article.getPublicationTypes.asScala
@ -202,6 +203,7 @@ object PubMedToOaf {
// ADD ORIGINAL TYPE to the publication
val itm = new InstanceTypeMapping
itm.setOriginalType(i_type.get._1)
itm.setVocabularyName(ModelConstants.OPENAIRE_COAR_RESOURCE_TYPES_3_1)
pubmedInstance.setInstanceTypeMapping(List(itm).asJava)
}
else

1
dhp-workflows/dhp-doiboost/src/main/scala/eu/dnetlib/doiboost/crossref/Crossref2Oaf.scala
View File

@ -286,6 +286,7 @@ case object Crossref2Oaf {
//ADD ORIGINAL TYPE to the mapping
val itm = new InstanceTypeMapping
itm.setOriginalType(originalType)
itm.setVocabularyName(ModelConstants.OPENAIRE_COAR_RESOURCE_TYPES_3_1)
instance.setInstanceTypeMapping(List(itm).asJava)
result.setResourcetype(
OafMapperUtils.qualifier(