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3069 Commits

Author SHA1 Message Date
Alessia Bardi 8d3b60f446 test for patching records for EOSC Future 2021-10-07 17:30:45 +02:00
Alessia Bardi b924276e18 tests to generate records for the EOSC-Future demo with the EOSC Jupyter Notebbok subject 2021-09-24 17:11:56 +02:00
Claudio Atzori df15a4dc9f Merge pull request 'UnknowHostException handling for orcid collector api' (#141) from enrico.ottonello/dnet-hadoop:beta into beta 
Reviewed-on: D-Net/dnet-hadoop#141
 2021-09-22 11:51:13 +02:00
Enrico Ottonello 92a63f78fe multiple download attempts handling if a connection to orcid server fails 2021-09-20 18:25:00 +02:00
Enrico Ottonello 0c74f5667e Merge branch 'beta' of https://code-repo.d4science.org/D-Net/dnet-hadoop into beta 2021-09-20 18:12:31 +02:00
Claudio Atzori 71cfa386bc Merge pull request 'cleaning for relation fields' (#142) from clean_relations into beta 
Reviewed-on: D-Net/dnet-hadoop#142
 2021-09-17 16:01:03 +02:00
Claudio Atzori 09c2eb7f62 Merge branch 'beta' into clean_relations 2021-09-16 11:09:47 +02:00
Claudio Atzori 954a16c213 Merge pull request 'Propagation relations not Cleaned' (#143) from enrichment into beta 
Reviewed-on: D-Net/dnet-hadoop#143
 2021-09-15 19:14:38 +02:00
Miriam Baglioni e9ccdf853f related to D-Net/dnet-hadoop#132 2021-09-15 18:44:54 +02:00
Claudio Atzori 12766bf5f2 Merge branch 'beta' into clean_relations 2021-09-15 17:18:15 +02:00
Claudio Atzori 663b1556d7 manually integrating PR#140 D-Net/dnet-hadoop#140 2021-09-15 16:40:25 +02:00
Claudio Atzori ebf53a1616 added cleaning for relation fields: subRelType & relClass according to dedicated vocabs 2021-09-15 16:10:37 +02:00
Enrico Ottonello 8b804e7fe1 removed unused imports 2021-09-14 17:30:52 +02:00
Enrico Ottonello aefa36c54b other task executions go ahead if UnknownHostException happens on a single task 2021-09-14 17:26:15 +02:00
Sandro La Bruzzo aed29156c7 changed behavior in transformation job, that doesn't fail at first error 2021-09-07 19:05:46 +02:00
Sandro La Bruzzo 3c6fc2096c fix bug on oai iterator that skip record cleaned 2021-09-07 10:46:26 +02:00
Sandro La Bruzzo d4dadf6d77 reduced max number of PID in Relatedentity 2021-09-02 14:21:24 +02:00
Sandro La Bruzzo 9f8a80deb7 fixed wrong import of unresolved relation in openaire 2021-09-01 14:16:27 +02:00
Alessia Bardi 3762b17f7b added VERSIOn and PART relationship and re-ordered according to my personal and obviously possibly biased 
ordering
 2021-08-31 20:20:05 +02:00
Sandro La Bruzzo e8b3cb9147 Implemented method to download delta updates in EBI Links 2021-08-30 09:32:45 +02:00
Alessia Bardi ccf4103a25 keep the original url if the decoder fails for any reason 2021-08-25 10:07:58 +02:00
Sandro La Bruzzo 45898c71ac fixed wrong doi in pubmed 2021-08-24 15:20:04 +02:00
Alessia Bardi 00a28c0080 originalId was renamed to acronym 2021-08-23 15:02:21 +02:00
Alessia Bardi f19b04d41b code formatting after mvn compile 2021-08-23 14:33:39 +02:00
Alessia Bardi 412d2cb16a added dependencies to classgraph and opencsv. Bumped version of dhp-schemas 2021-08-23 14:32:00 +02:00
Alessia Bardi 3bcac7e88c Merge pull request 'towards EOSC datasource profiles' (#130) from datasource_model_eosc_beta into beta 
Reviewed-on: D-Net/dnet-hadoop#130
 2021-08-23 11:58:34 +02:00
Alessia Bardi 931f430129 Merge branch 'beta' into datasource_model_eosc_beta 2021-08-23 11:57:21 +02:00
Alessia Bardi 4c1474e693 Dealing with #6859#note-2: we have to decode URLs to avoid & and other chars encoded becasue of the original XML representation of data 2021-08-20 17:03:30 +02:00
Miriam Baglioni 5f8ccbc365 Merge branch 'beta' of https://code-repo.d4science.org/D-Net/dnet-hadoop into beta 2021-08-20 11:13:47 +02:00
Miriam Baglioni 882abb40e4 CrossrefDump - 2021-08-20 11:12:53 +02:00
Miriam Baglioni 45c62609af CrossrefDump - modified because parameter file was moved 2021-08-20 11:12:31 +02:00
Miriam Baglioni 35880c0e7b CrossrefDump - changed the wf to be able to resume from one of the steps 2021-08-20 11:11:35 +02:00
Miriam Baglioni f3b6c392c1 CrossrefDump - moving parameter file under folder crossref_dump_reader 2021-08-20 11:10:58 +02:00
Miriam Baglioni 65822400ce CrossrefDump - added new parameter file that was missing 2021-08-20 11:10:35 +02:00
Alessia Bardi a053e1513c different funders in blacklist from BETA and PROD aggregator 2021-08-19 11:32:27 +02:00
Alessia Bardi 812bd54c57 different funders in blacklist from BETA and PROD aggregator 2021-08-19 11:30:14 +02:00
Miriam Baglioni a65d3caaea Merge branch 'beta' of https://code-repo.d4science.org/D-Net/dnet-hadoop into beta 2021-08-19 10:29:10 +02:00
Miriam Baglioni e5cf11d088 change open access route to result matching hbm to gold 2021-08-19 10:29:04 +02:00
Claudio Atzori 7c0c67bdd6 added mock pom 2021-08-13 17:45:53 +02:00
Claudio Atzori 82086f3422 fixed directory name 2021-08-13 17:42:14 +02:00
Claudio Atzori bc7068106c added crossref download oozie workflow 2021-08-13 17:19:44 +02:00
Claudio Atzori 2c0a05f11a manually merged PR#139 2021-08-13 17:15:53 +02:00
Claudio Atzori d43667d857 Merge pull request 'Automatic download of Crossref' (#138) from crossref_dw_wf into beta 
Reviewed-on: D-Net/dnet-hadoop#138
 2021-08-13 17:10:10 +02:00
Miriam Baglioni 5856ca8a7b merging with branch beta - resolved conflicts 2021-08-13 16:45:45 +02:00
Miriam Baglioni 6fec71e8d2 removed the specific of the infra we are running the wf from the wf name 2021-08-13 16:39:02 +02:00
Miriam Baglioni ed7e28490a change in sh 2021-08-13 16:19:01 +02:00
Claudio Atzori 7743d0f919 consolidated dnet wf profiles into the same submodule 2021-08-13 16:14:54 +02:00
Miriam Baglioni 6eb7508995 mergin with branch beta 2021-08-13 16:07:04 +02:00
Claudio Atzori f74adc4752 added DownloadCSV2 as alternative implementation of the same download procedure 2021-08-13 15:52:15 +02:00
Claudio Atzori 5f0903d50d fixed CSV downloader & tests 2021-08-13 14:17:54 +02:00