lsmyrnaios
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UrlsController
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82 Commits

Author SHA1 Message Date
Lampros Smyrnaios 6a03103b79 Update dependencies. 2022-11-10 16:50:21 +02:00
Lampros Smyrnaios aad37cd81e Add the "StatsController", which brings the "getNumberOfPayloads" and "getNumberOfRecordsInspected" endpoints. 2022-10-18 15:00:26 +03:00
Lampros Smyrnaios e2d53105d1 Fix not creating the "assignment" table in a new production database, which contains only the "publication" and "datasource" data. 2022-10-07 15:51:31 +03:00
Lampros Smyrnaios b6340066a7 - Improve handling of the case, where the full-texts were found, but the Controller could not acquire them from the Worker. 
- Add/improve logs and comments.
- Code cleanup.
 2022-09-28 22:34:33 +03:00
Lampros Smyrnaios a22144bd51 - Refactor "FileUtils.getErrorMessageFromResponseBody(conn)" into "FileUtils.getMessageFromResponseBody(conn, isError)", in order to be able to either retrieve the "normal" or the "error" response. 
- Add comments.
 2022-09-15 23:12:05 +03:00
Lampros Smyrnaios 3e8f9c6074 Update the "UriBuilder.java" to be able to acquire the running port of the server, in case the port-number was initially set to "random" (0). Also make sure we get the "localHostAddress" and not the "localHostName", in case the public IP is not retrievable. 2022-09-12 17:04:05 +03:00
Lampros Smyrnaios a2cd02115f - Update the Spring-Security-code to use the "SecurityFilterChain", as the previous code was deprecated. 
- Update dependencies.
 2022-06-27 21:41:32 +03:00
Lampros Smyrnaios e3b374a32f - Optimize file-related tasks. 
- Update dependencies.
- Code cleanup.
 2022-05-26 15:43:59 +03:00
Lampros Smyrnaios 9096137008 Update documentation. 2022-04-14 14:42:36 +03:00
Lampros Smyrnaios 9b95eebb6c - Remove the obsolete "parenthesis" and "increasing duplicate-num" from the full-texts' names, before sending them to the S3-Object-Store. They now end with the "file-hash", so it is guaranteed that they will be unique. The Worker continues to produce the previous kind of names, without any disturbance. 
- Improve logging.
- Update MinIO dependency.
 2022-04-11 21:15:22 +03:00
Lampros Smyrnaios a81ed3c60f - Add an "isTestEnvironment"-switch, which makes it easier to work with production and test databases. 
- In case the Worker cannot be reached during a full-texts' batch request, abort the rest of the batches.
- Fix memory leaks when unzipping the batch-zip-file.
- Add explanatory comments for picking the database related to a full-text file.
 2022-04-08 17:39:45 +03:00
Lampros Smyrnaios 33fc61a8d9 - Fix the fileName-ID not being directly related with the datasourceID, in the S3-ObjectStore name. Add explanatory comments. 
- Add missing error-logs.
 2022-04-05 16:22:02 +03:00
Lampros Smyrnaios a23c918a42 - Fix a "@JsonProperty" annotation inside "Payload.java". 
- Fix a "@Value" annotation inside "FileUtils.java".
- Add a new database and show its name along with the initial's name in the logs.
- Code cleanup and improvement.
 2022-04-05 00:01:44 +03:00
Lampros Smyrnaios 5e4fad2479 - Change the fileNames' structure in the S3-ObjectStore. 
- Update dependencies.
 2022-04-01 19:24:04 +03:00
Lampros Smyrnaios 48670f3399 - Show the percentage of the "NumFullTextsFound", in the logs. 
- Update dependencies.
 2022-03-28 14:29:31 +03:00
Lampros Smyrnaios e587b2ca6c Update Spring dependencies. 2022-02-25 17:41:24 +02:00
Lampros Smyrnaios 88acaae20f - Replace the "numFullTextUrlsFound"-counter with "numFullTextsFound"-counter to reflect the end result of the actually available full-texts (which were downloaded by the Worker). 
- Optimize the gather-fileNames loop.
- Improve a message in "installAndRun.sh"
 2022-02-23 17:40:06 +02:00
Lampros Smyrnaios ad5dbdde9b - Improve performance when inserting records into the "attempt" table, by splitting the records equally, across more threads. 
- Bring back the "UriBuilder", which informs us in the logs, about the Controller's url (IP, PORT, API).
- Code cleanup.
 2022-02-22 13:54:16 +02:00
Lampros Smyrnaios dfd40cb105 Insert only the records with uploaded-to-S3 full-texts, in the "payload" table. 2022-02-17 16:27:40 +02:00
Lampros Smyrnaios 71f6b46130 - In case of an error when creating the "current_assignment" table (e.g out of memory in the backend database server), check for partial-creation and drop it. Also, in any case, before we drop this table, now check if it exists firsts (in general it should always exist, unless the creation results in an error and the table was not created at all). 
- Fix an error-message.
- Update dependencies.
- Code cleanup.
 2022-02-14 12:36:00 +02:00
Lampros Smyrnaios d2ed9cd9ed Improve efficiency and performance when processing the full-texts. 2022-02-08 15:02:13 +02:00
Lampros Smyrnaios 5819bf584b Update the README.md 2022-02-07 21:11:03 +02:00
Lampros Smyrnaios 1111c850b9 - Add support for more than one full-text per id. Allow recognizing fileName additions: "id(1).pdf", "id(2).pdf", etc. 
- Fix not giving the databaseName in the "ImpalaController.get10PublicationIdsTest()".
- Improve consistency in the "maxAttemptsPerRecord" value, among different threads. Also, reduce the value-increase by one.
- Check if the tableName string is empty, in the "mergeParquetFiles".
- Improve error-logging.
- Set some local variables to "final", optimizing code-execution by the JVM.
 2022-02-07 13:57:09 +02:00
Lampros Smyrnaios 5d70e82504 Merge pull request 'Springify and dockerize project (fixed and improved)' (#2) from springify_project into master 
Reviewed-on: #2
 2022-02-04 14:56:16 +01:00
Lampros Smyrnaios b206114144 - Allow the user to build, push and run the App in Docker, straight though the "installAndRun.sh" script. 
- Re-add the logback-spring configuration.
- Change the docker-app name.
 2022-02-04 15:49:56 +02:00
Lampros Smyrnaios 6aab1d242b - Improve performance when handling WorkerReports' database insertions, by using parallelism to insert to two different tables in the same time. Also, pre-cache the query-argument-types. 
- Update the error-message and counting system, on partial insertion event.
 2022-02-04 14:48:22 +02:00
Lampros Smyrnaios be4898e43e Bug fixes and improvements: 
- Fix an NPE, when the "getTestUrls"-endpoint is called. It was thrown because of an absent per-thread initialization of some thread-local variables.
- Fix JdbcTemplate error when querying the "getFileLocationForHashQuery".
- Fix the "S3ObjectStore.isLocationInStore" check.
- Fix not catching/handling some exceptions.
- Fix/improve log-messages.
- Optimize the "getFileLocationForHashQuery" to return only the first row. In the latest change, without this optimization, the query-result would cause non-handling the same-hash cases, because of an exception.
- Optimize the "ImpalaConnector.databaseLock.lock()" positioning.
- Update the "getTestUrls" api-path.
- Optimize list-allocation.
- Re-add the info-message about the successful emptying of the S3-bucket.
- Code cleanup.
 2022-02-02 20:19:46 +02:00
Lampros Smyrnaios d1c86ff273 Merge pull request 'Springify project' (#1) from antonis.lempesis/UrlsController:master into springify_project 
Reviewed-on: #1
 2022-02-01 19:51:50 +01:00
Antonis Lempesis 35966b6f6e finishing toucehs 2022-02-01 16:57:28 +02:00
Antonis Lempesis c093e52d15 Merge branch 'master' of https://code-repo.d4science.org/antonis.lempesis/UrlsController 2022-02-01 02:08:21 +02:00
Antonis Lempesis e9bede5c45 more fixes 2022-02-01 02:08:02 +02:00
Antonis Lempesis f5748434c7 Merge branch 'master' of https://code-repo.d4science.org/antonis.lempesis/UrlsController 2022-01-31 14:01:39 +02:00
Antonis Lempesis 9ac10fc4b3 fixed Value annotations 2022-01-31 14:01:26 +02:00
Antonis Lempesis 0772e9cdfb Merge branch 'master' of https://code-repo.d4science.org/antonis.lempesis/UrlsController 2022-01-31 13:49:34 +02:00
Antonis Lempesis 1c82088a7c fixed Value annotations 2022-01-31 13:49:14 +02:00
Antonis Lempesis 3da6fd98e9 added Dockerfile 2022-01-31 04:21:31 +02:00
Antonis Lempesis 6dde8c0faa finished merge 2022-01-31 04:17:16 +02:00
Antonis Lempesis e47fd8d97b merged refactor branch 2022-01-30 23:10:06 +02:00
Antonis Lempesis 3741cce886 springified project 2022-01-30 22:15:13 +02:00
Antonis Lempesis bf26bf955f springified project 2022-01-30 22:14:52 +02:00
Lampros Smyrnaios d0ab42e4fa - Change the scheme of the file-location URI. 
- Move the old and the current database names in the "application.properties" file.
- Improve logging.
 2022-01-28 07:24:42 +02:00
Lampros Smyrnaios 92b11baf93 - Update the repository for the Impala JDBC Driver. 
- Code cleanup.
 2022-01-28 00:59:19 +02:00
Antonis Lempesis 91f460ce51 moved impala jar to omtd repository and updated build file 2022-01-28 00:41:29 +02:00
Lampros Smyrnaios a01e11eef0 When all the data is processed, increase the number of "max-attempts" to retry some very old records, in the next requests. 2022-01-27 01:18:26 +02:00
Lampros Smyrnaios 3c9f8870d1 - Change the repository for the Impala JDBC Driver, as the previous one had networking issues. 
- Optimize the "findAssignmentsQuery".
 2022-01-26 19:52:46 +02:00
Lampros Smyrnaios ff46839158 Fix not prioritizing the gradle version defined inside the "installAndRun.sh" script. 2022-01-21 15:45:12 +02:00
Lampros Smyrnaios 8d9336fa52 Update dependencies. 2022-01-21 15:04:29 +02:00
Lampros Smyrnaios ab99bc6168 - Make sure the temp table "current_assignment" from a cancelled previous execution, is dropped and purged on startup. 
- Improve logging.
- Code cleanup.
 2022-01-19 01:37:47 +02:00
Lampros Smyrnaios 83f40a23d9 Bring back the prepared-statements for the insert-queries. After the fix of the "broken pipe"-error, they now work. Bringing them back, increases security and solves the "SQL syntax errors" caused by the values of some URLs. 2022-01-13 00:54:21 +02:00
Lampros Smyrnaios 2cf25b0d26 - Fix Impala "broken pipe" error, by closing the connection when not in need. The connection is reopened later with minimal overhead, as a connection pool is used. 
- Fix not closing the database-connection in case of a specific error (also in a commented error-case).
 2022-01-13 00:47:15 +02:00