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UrlsController
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- Replace the "numFullTextUrlsFound"-counter with "numFullTextsFound"-counter to reflect the end result of the actually available full-texts (which were downloaded by the Worker). 

- Optimize the gather-fileNames loop.
- Improve a message in "installAndRun.sh"
This commit is contained in:
Lampros Smyrnaios 2022-02-23 17:40:06 +02:00
parent ad5dbdde9b
commit 88acaae20f
2 changed files with 27 additions and 28 deletions
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2
installAndRun.sh
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@ -45,7 +45,7 @@ if [[ justInstall -eq 0 ]]; then
sudo docker --version || (echo -e "Docker was not found!"; exit 9)
dockerImage=${username}"/urls_controller:latest"
sudo docker build -t "${dockerImage}" .
echo -e "\nPushing docker image.. (the account password is required)..\n"
echo -e "\nPushing docker image.. (the account password is required, otherwise it will not be pushed, but it will continue to run)..\n"
(sudo docker login -u "${username}" && sudo docker push "${dockerImage}") || true
(sudo mkdir -p "$HOME"/tmp/config && sudo cp ./src/main/resources/application.properties "$HOME"/tmp/config) || true # This also replaces an existing "application.properties".
sudo docker run -d --mount type=bind,source="$HOME"/tmp/config,target=/mnt/config -p 1880:1880 "${dockerImage}" && echo "The docker container started running."

53
src/main/java/eu/openaire/urls_controller/util/FileUtils.java
View File

@ -105,33 +105,32 @@ public class FileUtils {
remoteAddr = request.getRemoteAddr();
// Get the file-locations.
int numFullTextUrlsFound = 0;
int numFullTextsFound = 0;
int numFilesFoundFromPreviousAssignmentsBatches = 0;
HashMultimap<String, Payload> allFileNamesWithPayloads = HashMultimap.create((urlReports.size() / 5), 3); // Holds multiple values for any key, if a fileName(key) has many IDs(values) associated with it.
String getFileLocationForHashQuery = "select `location` from " + databaseName + ".payload where `hash` = ? limit 1" ;
final int[] hashArgType = new int[] {Types.VARCHAR};
ImpalaConnector.databaseLock.lock();
for ( UrlReport urlReport : urlReports ) {
UrlReport.StatusType statusType = urlReport.getStatus();
if ( (statusType == null) || statusType.equals(UrlReport.StatusType.non_accessible) ) {
continue;
}
numFullTextUrlsFound ++;
for ( UrlReport urlReport : urlReports )
{
Payload payload = urlReport.getPayload();
if ( payload == null )
continue;
String fileLocation = null;
String fileLocation = payload.getLocation();
if ( fileLocation == null )
continue; // The full-text was not retrieved, go to the next UrlReport.
// Query the payload-table FOR EACH RECORD to get the fileLocation of A PREVIOUS RECORD WITH THE SAME FILE-HASH.
// If no result is returned, then this record is not previously found, so go ahead and add it in the list of files to request from the worker.
// If a file-location IS returned (for this hash), then this file is already uploaded to the S3. Update the record to point to that file-location and do not request that file from the Worker.
String fileHash = payload.getHash();
if ( fileHash != null ) {
String alreadyFoundFileLocation = null;
try {
fileLocation = jdbcTemplate.queryForObject(getFileLocationForHashQuery, new Object[] {fileHash}, new int[] {Types.VARCHAR}, String.class);
alreadyFoundFileLocation = jdbcTemplate.queryForObject(getFileLocationForHashQuery, new Object[] {fileHash}, hashArgType, String.class);
} catch (EmptyResultDataAccessException erdae) {
// No fileLocation is found, it's ok. It will be null by default.
} catch (Exception e) {
@ -142,33 +141,33 @@ public class FileUtils {
// Unless we do what it is said above, do not continue to the next UrlReport, this query-exception should not disrupt the normal full-text processing.
}
if ( fileLocation != null ) { // If the full-text of this record is already-found and uploaded.
payload.setLocation(fileLocation); // Set the location to the older identical file, which was uploaded to S3. The other file-data is identical.
//logger.debug("The record with ID \"" + payload.getId() + "\" has an \"alreadyRetrieved\" file, with hash \"" + fileHash + "\" and location \"" + fileLocation + "\"."); // DEBUG!
if ( alreadyFoundFileLocation != null ) { // If the full-text of this record is already-found and uploaded.
payload.setLocation(alreadyFoundFileLocation); // Set the location to the older identical file, which was uploaded to S3. The other file-data is identical.
//logger.debug("The record with ID \"" + payload.getId() + "\" has an \"alreadyRetrieved\" file, with hash \"" + fileHash + "\" and location \"" + alreadyFoundFileLocation + "\"."); // DEBUG!
numFilesFoundFromPreviousAssignmentsBatches ++;
numFullTextsFound ++;
continue; // Do not request the file from the worker, it's already uploaded. Move on.
}
}
// If the full-text of this record was not found by a previous batch...
fileLocation = payload.getLocation();
if ( fileLocation != null ) { // If the docFile was downloaded (without an error)..
Matcher matcher = FILENAME_WITH_EXTENSION.matcher(fileLocation);
if ( ! matcher.matches() ) {
continue;
}
String fileNameWithExtension = matcher.group(1);
if ( (fileNameWithExtension == null) || fileNameWithExtension.isEmpty() ) {
continue;
}
allFileNamesWithPayloads.put(fileNameWithExtension, payload); // The keys and the values are not duplicate.
// Task with ID-1 might have an "ID-1.pdf" file, while a task with ID-2 can also have an "ID-1.pdf" file, as the pdf-url-2 might be the same with pdf-url-1, thus, the ID-2 file was not downloaded again.
// Extract the "fileNameWithExtension" to be added in the HashMultimap.
Matcher matcher = FILENAME_WITH_EXTENSION.matcher(fileLocation);
if ( ! matcher.matches() ) {
continue;
}
String fileNameWithExtension = matcher.group(1);
if ( (fileNameWithExtension == null) || fileNameWithExtension.isEmpty() ) {
continue;
}
numFullTextsFound ++;
allFileNamesWithPayloads.put(fileNameWithExtension, payload); // The keys and the values are not duplicate.
// Task with ID-1 might have an "ID-1.pdf" file, while a task with ID-2 can also have an "ID-1.pdf" file, as the pdf-url-2 might be the same with pdf-url-1, thus, the ID-2 file was not downloaded again.
}// end-for
ImpalaConnector.databaseLock.unlock(); // The remaining work of this function does not use the database.
logger.info("NumFullTextUrlsFound by assignments_" + assignmentsBatchCounter + " = " + numFullTextUrlsFound + " (out of " + urlReports.size() + ").");
logger.info("NumFullTextsFound by assignments_" + assignmentsBatchCounter + " = " + numFullTextsFound + " (out of " + urlReports.size() + ").");
logger.debug("NumFilesFoundFromPreviousAssignmentsBatches = " + numFilesFoundFromPreviousAssignmentsBatches);
ArrayList<String> allFileNames = new ArrayList<>(allFileNamesWithPayloads.keySet());