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447 Commits

Author SHA1 Message Date
Claudio Atzori 3bd3653be9 OAF-store-graph mdstores: save them in text format 2022-01-04 16:39:39 +01:00
Claudio Atzori 3dc48c7ab5 OAF-store-graph mdstores: save them in text format 2022-01-04 16:39:27 +01:00
Claudio Atzori f82db765db OAF-store-graph mdstores: save them in text format 2022-01-04 16:39:15 +01:00
Claudio Atzori 9458ee7938 serialise records in the OAF-store-graph mdstores in json format. Read them again in the graph construction phase using a tolerant parser to support backward compatible changes in the evolution of the schema 2022-01-04 16:38:09 +01:00
Sandro La Bruzzo feea154e89 remove working dir after test 2021-11-25 11:02:38 +01:00
Sandro La Bruzzo 028a8acad8 add test resources 2021-11-25 10:54:47 +01:00
Sandro La Bruzzo 2164a2a889 Datacite: Code Refactor generated a general SparkApplication Scala where all the spark scala have to inherit 
Commented a little the Datacite transformation code
 2021-11-25 10:54:13 +01:00
Sandro La Bruzzo a7cf277d98 Datacite: Removed HostedBy Patch as described on ticket #7219, Now all the records will have hosted by Unknown Repository 2021-11-22 16:03:17 +01:00
Sandro La Bruzzo fc03c99805 fixed javadocs url after deploying site 2021-11-19 10:46:33 +01:00
Claudio Atzori bd9a43cefd Revert to 4094f2bb9a 2021-11-19 09:20:43 +01:00
Sandro La Bruzzo 2506d7a679 Merge branch 'mvn_site_documentation' of code-repo.d4science.org:D-Net/dnet-hadoop into mvn_site_documentation 2021-11-17 11:07:24 +01:00
Sandro La Bruzzo cded363b55 code refactor, created and moved scala code on the correct maven folder under src/main/scala and src/test/scala 2021-11-17 11:06:35 +01:00
Miriam Baglioni 4094f2bb9a added integration md file 2021-11-17 10:04:52 +01:00
Miriam Baglioni ec8b0219ff [Documentation] Added first page for Integration via unresolved entities generation 2021-11-16 17:41:34 +01:00
Sandro La Bruzzo 2d67020c59 added dhp-enrichment maven site template 2021-11-16 16:01:08 +01:00
Claudio Atzori bafa2990f3 code formatting 2021-11-15 17:07:16 +01:00
Sandro La Bruzzo efa09057db Merge branch 'beta' of code-repo.d4science.org:D-Net/dnet-hadoop into beta 2021-11-15 14:32:09 +01:00
Sandro La Bruzzo 48923e46a1 added documentation to Pubmed Class and also added mvn site for dhp-aggregations 2021-11-15 14:32:01 +01:00
Miriam Baglioni 4ec88c718c merge with beta - resolved conflict in pom 2021-11-15 10:52:16 +01:00
Miriam Baglioni 6f1a434e90 [Bypass Action Set] Fixed test to consider the new identifier utils 2021-11-15 09:59:23 +01:00
Miriam Baglioni 157d33ebf9 [Bypass Action Set] Refactoring 2021-11-15 09:58:48 +01:00
Miriam Baglioni 92d0e18b55 [Bypass Action Set] used constant DOI instead of "doi" 2021-11-12 10:56:58 +01:00
Miriam Baglioni 881113743f [Bypass Action Set] refactoring 2021-11-12 10:55:50 +01:00
Miriam Baglioni 47ccb53c4f [Bypass Action Set] modification for comment D-Net/dnet-hadoop#157 (comment) 2021-11-12 10:54:09 +01:00
Miriam Baglioni 716021546e [Bypass Action Set] minor fix 2021-11-12 10:18:01 +01:00
Miriam Baglioni 935062edec [Bypass Action Set] creation of unresolved entities 2021-11-11 16:11:25 +01:00
Sandro La Bruzzo 4acfa8fa2e Scholexplorer Datasource Aggregation: 
- Added collectedfrom in the inverse relation generated
Relation resolution:
- increased number of partitions in workflow.xml
- using classid instead of classname to build the pid-dnetId mapping
 2021-10-26 17:51:20 +02:00
Sandro La Bruzzo 034304b33a conflict resolved on merge 2021-10-26 09:40:47 +02:00
Sandro La Bruzzo aeeebd573b code refactor renamed datacite package 2021-10-20 17:37:42 +02:00
Sandro La Bruzzo ab3a99d3e9 removed old datacite oozie workflow 2021-10-20 17:19:47 +02:00
Sandro La Bruzzo ae4e99a471 Adapted workflow of resolution of PID to work into OpenAIRE data workflow 
- Added relations in both verse on all Scholexplorer datasources
 2021-10-20 17:12:16 +02:00
Miriam Baglioni 1cc09adfaa Opencitations: chenaged the test class to mirror the creation or not of duplicate dois for .refs oc original plus added optional parameter to duplicate the relation 2021-10-18 14:11:27 +02:00
Sandro La Bruzzo 7b15b88d4c renamed wrong package, implemented last aggregation workflow for scholexplorer 2021-10-15 15:00:15 +02:00
Sandro La Bruzzo 51a03c0a50 refactor code for EBI from dhp-graph-mapper into dhp-aggregation 2021-10-14 14:23:13 +02:00
Sandro La Bruzzo 7387416e90 added params skip update to direct transform in OAF, this should be set to true in production 2021-10-12 12:36:30 +02:00
Sandro La Bruzzo 511da98d0c - fixed bug on download pmc Article 
- removed unused line of code in SparkCreateActionset
 2021-10-12 11:47:49 +02:00
Sandro La Bruzzo 5606014b17 code refactor see ticket #7065 2021-10-12 08:11:53 +02:00
Sandro La Bruzzo 66702b1973 Added node to update datacite 2021-09-28 08:59:06 +02:00
Miriam Baglioni 5ec69889db OpenCitations: creation of AS from OC 2021-09-27 16:02:06 +02:00
Miriam Baglioni f2118d771a first steps in the implementation of the integration of opencitations 2021-09-22 15:18:05 +02:00
Claudio Atzori 663b1556d7 manually integrating PR#140 D-Net/dnet-hadoop#140 2021-09-15 16:40:25 +02:00
Sandro La Bruzzo aed29156c7 changed behavior in transformation job, that doesn't fail at first error 2021-09-07 19:05:46 +02:00
Sandro La Bruzzo 3c6fc2096c fix bug on oai iterator that skip record cleaned 2021-09-07 10:46:26 +02:00
Sandro La Bruzzo 9f8a80deb7 fixed wrong import of unresolved relation in openaire 2021-09-01 14:16:27 +02:00
Sandro La Bruzzo e8b3cb9147 Implemented method to download delta updates in EBI Links 2021-08-30 09:32:45 +02:00
Alessia Bardi 931f430129 Merge branch 'beta' into datasource_model_eosc_beta 2021-08-23 11:57:21 +02:00
Claudio Atzori baed5e3337 test classes moved in specific components 2021-08-13 12:14:47 +02:00
Claudio Atzori 3359f73fcf cleanup & best practices 2021-08-13 12:00:42 +02:00
Miriam Baglioni 32fd75691f refactoring 2021-08-13 10:15:42 +02:00
Miriam Baglioni 5cd5714530 GetCSV refactoring - added ignore annotation for fields not in input csv 2021-08-13 10:06:49 +02:00