Bernaldo Mihasi
969df0357a
migrate rda properties in dataset profiles definitions in db to schematics
2023-03-27 14:58:45 +03:00
Bernaldo Mihasi
e2505039df
cleanup unused code
2023-02-21 14:09:33 +02:00
Bernaldo Mihasi
0c57bba0b4
rda json dmp import/export
2023-02-21 11:57:34 +02:00
Bernaldo Mihasi
9a8fc5e92e
schematics implementation, xml import export of dataset profiles
2023-02-21 11:46:44 +02:00
Bernaldo Mihasi
e22e348330
cleanup unused code
2023-02-21 11:41:07 +02:00
Bernaldo Mihasi
030f1ccf8e
add repository logo
2023-01-17 14:41:04 +02:00
Bernaldo Mihasi
66b2596036
delete files used for deposit in tmp storage
2022-12-27 09:44:43 +02:00
Bernaldo Mihasi
749dbefc38
1. return bad request when deposition failed and returned null
...
2. close modal with repositories after a successful deposition
2022-12-19 16:07:03 +02:00
Bernaldo Mihasi
39d709f41d
no message
2022-12-13 09:46:00 +02:00
Bernaldo Mihasi
c6d37806c8
drop column doi from dmp and refactor code(replace single doi with list of dois)
2022-12-08 13:12:54 +02:00
Bernaldo Mihasi
ad00695d4e
fix bug allowing invalid characters in pdf name
2022-12-08 13:04:55 +02:00
Bernaldo Mihasi
572be373e5
don't deposit empty supportingFiles.zip when no files are uploaded in datasets
2022-12-08 13:02:08 +02:00
Bernaldo Mihasi
679354f699
deposit datasets' attached files in zip format
2022-11-30 09:43:03 +02:00
Bernaldo Mihasi
7a0e1c89f2
when finalizing a dmp and its access rights are open, make it publicly available in Argos
2022-11-24 16:29:11 +02:00
Bernaldo Mihasi
573aab059b
remove redundant parameter in deposit interface
2022-11-22 09:58:47 +02:00
Bernaldo Mihasi
5e2639848b
dmps are deposited in dataverse as datasets under a parent predefined dataverse collenction
...
when a new dmp version is created and deposited, the corresponding dataset in dataverse/collection in zenodo create a new version too
deposit dmps as published not drafts
2022-11-22 09:40:05 +02:00
Bernaldo Mihasi
b4490cb0f3
[WIP] implement dataverse repository deposit
2022-11-10 10:12:11 +02:00
Bernaldo Mihasi
6b2bc3c1e0
cleanup code, add authorizationUrl and recordUrl in repositories config
2022-11-02 13:31:42 +02:00
Bernaldo Mihasi
59e26dbb8d
[WIP] EntityDoi table
2022-11-02 09:41:40 +02:00
Bernaldo Mihasi
7d624a2daa
[WIP] system deposit authentication, using default repo token
2022-10-27 09:32:26 +03:00
Bernaldo Mihasi
ab66a5f1da
[WIP] implement zenodo repository deposit, add authentication for depositions
2022-10-26 13:50:01 +03:00
Bernaldo Mihasi
7dd2030eb3
[WIP] create deposit interface and implement multiple deposit repositories
2022-10-24 09:35:49 +03:00
Konstantina Galouni
49e42e9cba
h2020_dataset.docx & WordBuilder.java & DataManagementPlanManager.java & DatasetManager.java: Updated footer of Dataset template to set title of DMP and Dataset.
2022-07-28 17:30:44 +03:00
George Kalampokis
fa723c07ae
Fix critical issue with open file handle leak on user guide folder
2022-07-28 11:23:39 +03:00
Konstantina Galouni
a2228a5fb6
#7597 , #7893 , #7895 , #7898 : Updated DMP template file (h2020.docx) for export | Added Dataset template file (h2020_dataset.docx) for export | Updated indentation on exported docs.
...
1. h2020.docx, h2020_dataset.docx: Updated DMP template & Added Dataset template.
2. application.properties, application-devel.properties, application-production.properties, application-staging.properties: Added property for dataset template file path configuration.h2020datasettemplate=documents/h2020_dataset.docx
3. ConfigLoader.java: Added method XWPFDocument getDatasetDocument();
4. DefaultConfigLoader.java: Added fiedls and methods for loading Dataset template (h2020_dataset.docx).
5. DataManagementPlanManager.java, DatasetManager.java, , HtmlToWorldBuilder.java, WordBuilder.java: Updated header/footer/first page in exports for DMPs and Datasets | Updated indentation in exports.
2022-07-26 17:00:54 +03:00
Konstantina Galouni
9b4c7aeb6f
DataManagementPlanManager.java: #7893 - Added description of Datasets on DMP exported word file.
2022-07-12 12:52:04 +03:00
Bernaldo Mihasi
0ac5902bfd
1. export redesign based on new word template
...
2. orcid researchers in export are clickable
2022-06-13 15:16:48 +03:00
George Kalampokis
5cd79a6368
When Exporting DMP to word/pdf sort it's Datasets based on creation date
2022-06-07 10:56:44 +03:00
Konstantina Galouni
79bc95b099
[Bug fix] DatasetProfileManager.java: In method "createNewVersionDatasetProfile()", do not set label and language from oldDatasetProfile.
2022-05-31 16:51:59 +03:00
George Kalampokis
e8a87765ee
Fix authorization issue with Dataset Templates not showing to their original creators (that are not Admins)
2022-05-31 16:14:25 +03:00
George Kalampokis
912a3cc095
Order datasets on DMP listing (ref #7746 )
2022-05-11 18:13:35 +03:00
Bernaldo Mihasi
cfd0707f2a
bug fix: license api-fields didnt get prefilled
2022-05-04 11:11:25 +03:00
George Kalampokis
7c933d9f32
Refactor Zenodo deposit creation. Add model for mapping instead of relying on stringBuilder
2022-04-07 17:31:45 +03:00
George Kalampokis
e373baee7e
Fix critical issue when importing from xml with researchers
2022-04-07 17:31:44 +03:00
George Kalampokis
2a12f1b5be
Change Dataset sorting on DMP overview and editor from last modified to last created
2022-04-05 15:29:36 +03:00
George Kalampokis
ef6e3b8d7c
Sort Datasets by Modified date on DMP Overview and DMP Editor
2022-04-01 13:54:13 +03:00
George Kalampokis
afb0be5b18
Make DMP export to be more consistent with the DMP shown on the front end UI
2022-03-29 15:13:58 +03:00
George Kalampokis
c41c89774b
Make Dataset Validation checker to no longer be exception depedant
2022-03-29 15:13:58 +03:00
George Kalampokis
3eb27c04f6
Fix critical issue with xml import
2022-03-29 11:32:52 +03:00
George Kalampokis
72507dd1b8
Fix issue with DMP json export if it have been imported from json
2022-03-29 10:57:06 +03:00
Bernaldo Mihasi
65b4e58aad
attach images in word export
2022-03-17 10:47:50 +02:00
Konstantina Galouni
2a9d8b8296
#7528 : [NEW] Upload files field type.
...
1. Datasets.java: In "delete()" method, call also fileManager.markAllFilesOfEntityIdAsDeleted.
2. DatasetManager.java: Added method "deleteOldFilesAndAddNew()" which is called by "createOrUpdate()", to mark as deleted files that are not used any more and save the new ones.
3. DatabaseRepository.java & DatabaseRepositoryImpl.java: Include in DAOs FileUploadDAO.
4. ModelBuilder.java & ViewStyle.java: Incluse "upload" field type.
5. field-data.ts:
a. In "getOrdinal()" method return Integer instead of int.
b. In "getValidations()" method added null check.
c. In methods "fromJsonObject()" and "toMap()" added special if clauses for "upload" field type.
6. application.properties:
a. Added property "file.storage", to set the folder where the files will be permanently saved.
b. Changed default spring.servlet.multipart.max-file-size and pring.servlet.multipart.max-request-size to 10 MB.
7. UserInvitationController.java: Deleted a print in System.out.
8. New files for upload field type: FileUploadDao.java, FileUploadDaoImpl.java, FileUpload.java, PostgreSQLEnumType.java (necessary for the enum EntityType), FileController.java, FileManager.java, UploadData.java.
2022-03-16 12:14:08 +02:00
George Kalampokis
dc06ba9201
Allow to return DMP with no Datasets for the Dataset Editor
2022-03-15 17:58:01 +02:00
George Kalampokis
563711eae4
Fix issue saving tags from template when the field is a textField
2022-03-15 17:52:58 +02:00
George Kalampokis
ea72f64ed4
Replace DB DOIFunder with a json config file
2022-03-01 14:37:49 +02:00
George Kalampokis
c3aff92cd4
Don't include Funder if it's not in the Doi Funder Table
2022-02-28 16:28:31 +02:00
George Kalampokis
5a3f871c58
Remove various unnecessary info messages
2022-02-28 15:24:10 +02:00
George Kalampokis
94a225cf9f
Add Description on Dataset Export
2022-02-22 16:39:35 +02:00
Bernaldo Mihasi
494ee47620
zenodo prefilling customizations
2022-02-22 15:53:25 +02:00
George Kalampokis
d1eab0d019
Fix issue with not showing datasets on all version listing
2022-02-22 11:30:22 +02:00
George Kalampokis
b6c28be3b3
Optimize Dashboard's recent activity logic, removed various unused fields from Listing Models and implement toDataModel conversion logic in some models
2022-02-21 17:16:32 +02:00
George Kalampokis
71b1010ea1
Merge remote-tracking branch 'origin/Development' into Development
2022-02-18 17:52:04 +02:00
George Kalampokis
d16e130dc6
Optimize general metric counter
2022-02-18 17:51:57 +02:00
George Kalampokis
11ff99fd77
Improve and generalize prefilling logic
2022-02-18 17:51:32 +02:00
argirok
3aa1c1ae59
fix issue with pub api #7326#note-5 the value was a number instaed of search
2022-02-18 17:41:33 +02:00
argirok
cc926970ca
Merge branch 'Development' of code-repo.d4science.org:MaDgiK-CITE/argos into Development
...
Conflicts:
dmp-frontend/src/app/ui/admin/dataset-profile/editor/components/field/dataset-profile-editor-field.component.ts
2022-02-18 17:09:34 +02:00
Bernaldo Mihasi
da5ba952e1
rda export import tag bug, format preffiling fixed
2022-02-17 10:11:34 +02:00
George Kalampokis
fac6a93c0a
Fix minor worldBuilder issue and a minor refactor
2022-02-10 13:21:21 +02:00
George Kalampokis
4740fbe8e0
Refactor visibilityRuleService
2022-02-09 15:23:16 +02:00
argirok
938f98100f
Merge branch 'Development' of code-repo.d4science.org:MaDgiK-CITE/argos into Development
2022-02-04 10:05:32 +02:00
Bernaldo Mihasi
125a97baed
keyword-tags exported-imported fixes, prefilling more mapping
2022-01-28 14:55:52 +02:00
George Kalampokis
70d37cead1
Fix wrong metrics count for Dataset Template
2022-01-27 11:05:40 +02:00
argirok
a3c4b3c143
Merge branch 'Development' of code-repo.d4science.org:MaDgiK-CITE/argos into Development
...
Conflicts:
dmp-backend/web/src/main/java/eu/eudat/logic/proxy/fetching/RemoteFetcherUtils.java
2022-01-24 11:12:56 +02:00
argirok
858fa3ee71
#7326 - static APIs
...
1. Rename of "Registries" to "Metadata"
2. add apis for taxonomy, licenses, publications
3. change data repositories: from querying all registered to all of type data repository
4. add separate APIs for journals and pub repositories
2022-01-21 15:44:51 +02:00
George Kalampokis
5a70ce7602
Fix issue of not keeping dataset template users after version update
2022-01-13 13:26:30 +02:00
George Kalampokis
db01f2d119
Add fixedMappings for prefilling
2022-01-12 11:43:32 +02:00
George Kalampokis
728ea9a24f
Add prefilling backend endpoints
2021-12-10 15:37:39 +02:00
George Kalampokis
0a39e64f9a
Merge remote-tracking branch 'origin/Development' into Development
2021-12-07 17:16:41 +02:00
George Kalampokis
33784f3ee2
Add missing null check up
2021-12-07 17:16:22 +02:00
Diamantis Tziotzios
2cb985c23c
bug fix
2021-12-07 16:52:49 +02:00
Diamantis Tziotzios
197de17aa5
no message
2021-12-06 15:32:38 +02:00
George Kalampokis
de4c430d91
Fix issue with related datasets on dashboard
2021-12-03 16:49:23 +02:00
George Kalampokis
b2825c8369
Fix issue with parsing some custom auto complete sources
2021-12-02 18:03:31 +02:00
George Kalampokis
19aa2bd411
Fix critical issue with public datasets
2021-11-25 16:45:29 +02:00
George Kalampokis
aed23a655b
When exporting DMP to xml or json get only the active/finalized datasets and not the deleted ones
2021-11-24 18:14:24 +02:00
George Kalampokis
fc71e95cf3
Make dataset queries to return distinct results (avoid duplicate Id issues)
2021-11-24 16:23:02 +02:00
George Kalampokis
e546362f58
Fix issue with elasticsearch inconsistencies
2021-11-23 14:05:57 +02:00
Konstantina Galouni
bb0c398120
#7183 : In DMP invitation, return authors whose name/ email contains the query string given by user (case insensitive).
...
1. InvitationsManager.java: Added method "getUsersWithCriteria()" to filter results according to "userInfoRequestItem.getCriteria().getLike()".
2. UserInvitationController.java: In method "getUsers()" added parameter "@RequestBody UserInfoRequestItem userInfoRequestItem" and call new method "invitationsManager.getUsersWithCriteria()" (instead of getUsers()).
2021-11-22 13:44:41 +02:00
George Kalampokis
38cd336bc9
Add transactional to makeFinalize on DMP and remove jackson parsing when depositing to zenodo
2021-11-18 18:27:20 +02:00
George Kalampokis
54b142000c
Merge remote-tracking branch 'origin/Development' into Development
2021-11-09 14:23:30 +02:00
George Kalampokis
1a373bc6f8
Add email notification when a user is added to a Dataset Template (ref #7148 )
2021-11-09 14:23:22 +02:00
Konstantina Galouni
71b8742b0f
LicenseManager.java & LocalFetchManager.java & TagController.java: #7135 : No case sensitivilty for licenses, managers and tags.
2021-11-09 14:17:46 +02:00
George Kalampokis
a7badfd9d5
Add nexus prometheus metrics
2021-11-09 13:05:38 +02:00
George Kalampokis
58ecadd79b
Fix issue with project creation
2021-11-09 10:19:20 +02:00
George Kalampokis
39795f177f
Fix critical issue with file exports on chromium based web browsers
2021-11-02 14:50:20 +02:00
George Kalampokis
fd26e2a742
Fix issue with DMP index not updating after a new user is invited
2021-10-27 18:16:44 +03:00
George Kalampokis
e66362ec38
Add prometheus metric for the number of grants used based on DMP status (ref #6462 )
2021-10-20 12:42:08 +03:00
George Kalampokis
942782fe3c
Use metrics predifined names instead of plain Strings
2021-10-13 17:49:32 +03:00
George Kalampokis
65644c3a35
Add extra sanity checks
2021-10-13 17:47:50 +03:00
George Kalampokis
a4fef8e462
Refactor PDF conversion
2021-10-12 18:17:16 +03:00
George Kalampokis
1a821179db
Even more Fixes over dashboard's sorting
2021-10-12 18:06:14 +03:00
George Kalampokis
29919f981a
Fix issue with recent activity sorting
2021-10-12 15:41:20 +03:00
George Kalampokis
7fe84d7de5
Eliminate Duplicate user when making a new version
2021-10-08 16:52:01 +03:00
George Kalampokis
a3af8ce3a5
Merge branch 'spring-update' into Development
...
# Conflicts:
# dmp-backend/web/src/main/java/eu/eudat/controllers/Admin.java
# dmp-backend/web/src/main/java/eu/eudat/controllers/Login.java
# dmp-backend/web/src/main/java/eu/eudat/controllers/UserGuideController.java
# dmp-backend/web/src/main/java/eu/eudat/logic/managers/DataManagementPlanManager.java
# dmp-backend/web/src/main/java/eu/eudat/logic/managers/DatasetManager.java
# dmp-backend/web/src/main/java/eu/eudat/logic/managers/DatasetProfileManager.java
# dmp-backend/web/src/main/java/eu/eudat/logic/managers/MetricsManager.java
2021-10-08 16:04:52 +03:00
George Kalampokis
9919886c26
Fix issues with dataset sorting on Dashboard with Elasticsearch
2021-10-08 11:02:56 +03:00
George Kalampokis
77d50773b8
Merge branch 'improved_queries' into Development
...
# Conflicts:
# dmp-backend/web/src/main/java/eu/eudat/logic/managers/DataManagementPlanManager.java
2021-10-07 11:05:19 +03:00
George Kalampokis
524cededb6
Fix issue when exporting to docx/pdf
2021-10-06 18:16:39 +03:00
George Kalampokis
407961e137
Fix critical issue with DMP queries without elastic
2021-10-06 14:21:54 +03:00
George Kalampokis
3ec942cfa7
Add support for Html text when exporting to docx (alpha)
2021-10-05 17:58:46 +03:00
George Kalampokis
54c862ecbb
Minor metrics refactor
2021-10-05 13:09:02 +03:00
George Kalampokis
b66bde871a
Fix issue of new DMPs not showing on the user's listing with elasticsearch active ( #7010 )
2021-10-05 12:56:20 +03:00
George Kalampokis
91729bab6d
Optimize queries
2021-09-30 18:02:53 +03:00
George Kalampokis
defac6afcc
Fix issue with date formats on RDA import
2021-09-28 14:17:03 +03:00
George Kalampokis
06364873ca
Fix issue with unordered multiplicity fields
2021-09-27 18:11:55 +03:00
George Kalampokis
1ae2788453
Fix various issues with spring update
2021-09-14 17:43:02 +03:00
George Kalampokis
6f92409f1e
Update Spring boot framework to version 2.5.2
2021-09-07 09:42:31 +03:00
George Kalampokis
c964af25b5
Fix critical issue with public dataset query
2021-08-23 11:48:29 +03:00
George Kalampokis
5de811a76d
Vastly improve and optimize DMP and Dataset Queries (and with elastic)
2021-08-04 18:38:49 +03:00
George Kalampokis
4e87bd270e
Improve error handling when user has no zenodo access token
2021-08-02 18:31:10 +03:00
George Kalampokis
6a2099c2b9
Add user role check up when it's getting dataset profiles for the manager listing
2021-07-26 10:28:58 +03:00
George Kalampokis
9da0f4e776
Allow to re insert users on Dataset profile
2021-07-23 18:27:49 +03:00
George Kalampokis
c91059c854
Get latest available dataset profile instead of the version that is selected on the DMP
2021-07-20 12:55:52 +03:00
George Kalampokis
016acaaa0f
When counting organizations for the user count only the active ones
2021-07-19 18:34:29 +03:00
George Kalampokis
4b3468d513
Fix issue when validating dataset for finalization (needs rework)
2021-07-19 18:31:16 +03:00
George Kalampokis
d603fed61f
When new version is made keep all it's contributors
2021-07-06 16:56:37 +03:00
George Kalampokis
1c22ed2321
Add extraProperties for xml export/import and restore pdf export for zenodo deposit
2021-07-06 16:33:46 +03:00
George Kalampokis
d5cd90814a
Improve error handling
2021-07-06 13:33:58 +03:00
George Kalampokis
efe177f0b1
Fix issues with xml import and issues with zenodo deposit
2021-07-06 12:58:38 +03:00
George Kalampokis
c57e10a033
Fix issue with zenodo depositions
2021-07-06 10:29:14 +03:00
George Kalampokis
244bfa5c54
Fix various critical issues
2021-07-02 14:02:32 +03:00
George Kalampokis
4e3b98f1ff
Improvements over MS Word Document export
2021-06-30 17:17:17 +03:00
George Kalampokis
d1e3aae36d
Fix critical issue with dataset's copy dropdown
2021-06-30 12:51:12 +03:00
George Kalampokis
dcd7f24cac
Fix listing issues and improve elastic query
2021-06-29 11:45:20 +03:00
George Kalampokis
03b7699973
Reduce severity
2021-06-25 19:29:51 +03:00
George Kalampokis
d1df83f689
Add query db fallback for DMPs
2021-06-25 19:27:02 +03:00
George Kalampokis
42a22b4a65
Improve external researcher support
2021-06-17 18:48:18 +03:00
George Kalampokis
e94944abb1
Merge remote-tracking branch 'origin/Development' into Development
2021-06-17 13:58:36 +03:00
George Kalampokis
78186fb96d
If the invitation is accepted then send the user to the accepted DMP if the user click again the link from the email
2021-06-17 13:58:28 +03:00
Diamantis Tziotzios
d3d6c4a6aa
prometheus fix
2021-06-15 15:43:45 +03:00
George Kalampokis
be311f238b
Add visibility rules checkup on dataset finalize checkup
2021-06-01 12:30:01 +03:00
George Kalampokis
b76a787972
Hide grants without any active dmp
2021-05-10 17:17:08 +03:00
George Kalampokis
1d5befaf6a
Add new endpoint in order to validate datasets
2021-05-10 13:40:08 +03:00
Diamantis Tziotzios
ae2168b2d7
bug fix regarding template import
2021-05-05 11:20:43 +03:00
George Kalampokis
8a7cfab3b8
Fix various issues
2021-04-30 13:10:11 +03:00
George Kalampokis
df5281eeaa
Allow to manually add reference
2021-04-29 11:28:46 +03:00
George Kalampokis
77bcb95ad7
Fix issues when cloning dataset templates
2021-04-27 10:38:20 +03:00
George Kalampokis
e5264780c3
When finalize DMP properly finalize it's datasets first
2021-04-21 18:21:52 +03:00
Diamantis Tziotzios
ede8bbf48e
metrics update
2021-04-15 18:30:16 +03:00
George Kalampokis
961a4df270
Add total Users metric
2021-04-13 12:19:55 +03:00
George Kalampokis
48730e7937
Fix issue when accessing dataset profile users when there are no users.
2021-04-12 12:12:21 +03:00
George Kalampokis
c27ff1d446
Add missing metrics counters and made the metrics init task scheduled (per Hour) (ref #294 )
2021-04-12 12:00:07 +03:00
George Kalampokis
27bf69268e
Fix issue when creating new dataset profile
2021-04-12 10:49:22 +03:00
George Kalampokis
aca31dc9da
Add prometheus integration (ref #294 )
2021-04-09 19:05:04 +03:00
George Kalampokis
c57820d6b1
Remove "External References" from docx generation
2021-04-08 16:48:14 +03:00
George Kalampokis
4156875bae
Refactor and add logic for removing users from Dataset Templates
2021-04-07 19:08:57 +03:00
George Kalampokis
bc3c8b44d2
Add option to add or remove users from Dataset Templates
2021-04-07 19:03:22 +03:00
George Kalampokis
af04e34b6f
Add new User Role Dataset Template Editor.
2021-04-06 19:03:00 +03:00
George Kalampokis
c929eb3a2b
When uploading to zenodo upload both pdf and the RDA json files
2021-04-05 14:03:14 +03:00
George Kalampokis
fcd24fd907
Add community when depositing to zenodo (ARGOS).
2020-11-23 18:16:32 +02:00
George Kalampokis
66358acfcf
Replace the openDMP Affiliation on Zenodo with either a configurable
...
affiliation or the related organizations of the DMP
2020-11-19 18:39:25 +02:00