Commit Graph

347 Commits

Author SHA1 Message Date
Claudio Atzori 44a937f4ed factored out entity grouping implementation, extended to consider results from delegated authorities rather than identical records from other sources 2022-01-19 12:24:52 +01:00
Miriam Baglioni 42e8f76778 [GraphCleaning] change the return value in the filtering function to avoid to lose the APC entities 2022-01-13 16:06:43 +01:00
Claudio Atzori 4f212652ca scalafmt: code formatting 2022-01-11 16:57:48 +01:00
Miriam Baglioni be0acccf42 Merge branch 'beta' into dump 2021-12-22 12:39:57 +01:00
Sandro La Bruzzo 3920d68992 Fixed workflow generation of delta in datacite 2021-12-21 11:41:49 +01:00
Sandro La Bruzzo b881ee5ef8 [scholexplorer]
- implemented generation of scholix of delta update of datacite
2021-12-15 11:25:32 +01:00
Miriam Baglioni 56409d1281 [Dump] resolved conflicts with beta and merging 2021-12-14 15:03:45 +01:00
Miriam Baglioni a3592b463a Merge branch 'beta' of https://code-repo.d4science.org/D-Net/dnet-hadoop into beta 2021-12-14 14:58:26 +01:00
Claudio Atzori aff3ddc8d2 added cleaning for the format field, removing carrige return and tab characters 2021-12-14 11:41:46 +01:00
Miriam Baglioni 936578aaf1 Merge branch 'beta' of https://code-repo.d4science.org/D-Net/dnet-hadoop into beta 2021-12-13 15:01:47 +01:00
Claudio Atzori 41c70c607d cleaning workflow assigns the proper default instance type when a value could not be cleaned using the vocabularies 2021-12-09 16:44:28 +01:00
Claudio Atzori e6e177dda0 vocabulary based cleaning considers also the term label when looking up for a synonym 2021-12-09 13:57:53 +01:00
Miriam Baglioni b113586207 resolved conflicts 2021-12-07 10:16:14 +01:00
Sandro La Bruzzo 5d51b3dd4a Merge pull request 'scala_refactor' (#169) from scala_refactor into beta
Reviewed-on: #169
2021-12-06 15:33:44 +01:00
Miriam Baglioni 96a7d46278 [Graph Dump] fixed tests 2021-12-06 15:06:32 +01:00
Sandro La Bruzzo 81bf604059 [scala-refactor] Module dhp-common:
Moved all scala source into src/main/scala and src/test/scala
2021-12-06 11:29:24 +01:00
Claudio Atzori 9132727793 fixed date cleaning test 2021-12-06 10:54:05 +01:00
Claudio Atzori 863a2f9db3 avoid to filter OAF records defined as invisible = true 2021-12-03 09:08:12 +01:00
Miriam Baglioni 8905a39bf3 mergin with branch beta 2021-12-02 13:17:29 +01:00
Sandro La Bruzzo 1e1f5e4fe0 minor fix 2021-11-25 13:03:17 +01:00
Sandro La Bruzzo 2164a2a889 Datacite: Code Refactor generated a general SparkApplication Scala where all the spark scala have to inherit
Commented a little the Datacite transformation code
2021-11-25 10:54:13 +01:00
Sandro La Bruzzo 4542a2338b updated site configuration to deploy on website 2021-11-19 13:44:08 +01:00
Miriam Baglioni 9fae872181 [Graph Dump] changed to mirror the changes in the model 2021-11-19 11:25:50 +01:00
Claudio Atzori 62fa61f3cf merge from beta 2021-11-19 09:23:42 +01:00
Claudio Atzori bd9a43cefd Revert to 4094f2bb9a 2021-11-19 09:20:43 +01:00
Claudio Atzori 82a4e4efae [cleaning wf] fixed methodology to rule out invalid result titles, based on https://support.openaire.eu/issues/7206 2021-11-17 14:17:22 +01:00
Sandro La Bruzzo 60ae874dcb Merge branch 'beta' of code-repo.d4science.org:D-Net/dnet-hadoop into mvn_site_documentation 2021-11-17 11:08:34 +01:00
Claudio Atzori 49f897ef29 [cleaning wf] fixed regex used to spot garbage in result titles; adjusted threshold for filtering titles 2021-11-16 15:24:23 +01:00
Sandro La Bruzzo a1cafaf2e3 added mvn site for dnet-hadoop project 2021-11-16 15:16:28 +01:00
Sandro La Bruzzo aafdffa6b3 resolved conflict 2021-10-26 09:45:46 +02:00
Sandro La Bruzzo 034304b33a conflict resolved on merge 2021-10-26 09:40:47 +02:00
Claudio Atzori 6b34ba737e minor 2021-10-21 14:16:18 +02:00
Sandro La Bruzzo ae4e99a471 Adapted workflow of resolution of PID to work into OpenAIRE data workflow
- Added relations in both verse on all Scholexplorer datasources
2021-10-20 17:12:16 +02:00
Miriam Baglioni c8321ad31a merge with branch beta 2021-10-01 12:59:08 +02:00
Claudio Atzori 663b1556d7 manually integrating PR#140 #140 2021-09-15 16:40:25 +02:00
Claudio Atzori baed5e3337 test classes moved in specific components 2021-08-13 12:14:47 +02:00
Claudio Atzori 3359f73fcf cleanup & best practices 2021-08-13 12:00:42 +02:00
Miriam Baglioni 58f241f4a2 GetCSV refactoring - changed due to change of input resource 2021-08-13 10:04:44 +02:00
Miriam Baglioni f3d575f749 GetCSV refactoring - changed due to changes in input resource 2021-08-13 10:03:57 +02:00
Miriam Baglioni a5f6edfa6c GetCSV refactoring - changed to mirror the original model class 2021-08-13 09:30:03 +02:00
Miriam Baglioni 7402daf51a GetCSV refactoring - added dependency to open-csv lib 2021-08-12 17:59:19 +02:00
Miriam Baglioni 733bcaecf6 GetCSV refactoring - added test class (all the tests are disabled since they refer to remote resource) 2021-08-12 17:58:52 +02:00
Miriam Baglioni bfe8f5335c GetCSV refactoring - copied model classes in test path 2021-08-12 17:58:14 +02:00
Miriam Baglioni 6e84b3951f GetCSV refactoring - moving classes to dhp-common that have dependency with GetCSV class (that was located in graph-mapper) 2021-08-12 17:57:41 +02:00
Miriam Baglioni 9650eea497 reverting 2021-08-11 17:45:48 +02:00
Miriam Baglioni cc3d72df0e removing not needed dependency 2021-08-11 17:42:01 +02:00
Miriam Baglioni f9b6b45d85 reverting 2021-08-11 17:04:48 +02:00
Miriam Baglioni 8da3a25cf6 merging with branch beta 2021-08-11 15:55:34 +02:00
Claudio Atzori 2ee21da43b suggestions from SonarLint 2021-08-11 12:13:22 +02:00
Miriam Baglioni 6bd1eca7e0 merge branch with beta 2021-08-05 15:23:32 +02:00
Miriam Baglioni ee13da9258 merge branch with master 2021-08-05 11:34:20 +02:00
Miriam Baglioni 1d6ac3715b merge branch with beta 2021-07-30 11:58:29 +02:00
Claudio Atzori a9961a1835 [cleaning] title cleaning based on the me.xuender:unidecode library 2021-07-28 16:36:33 +02:00
Claudio Atzori 6dddad86ee [cleaning] title cleaning based on the me.xuender:unidecode library 2021-07-28 16:21:29 +02:00
Miriam Baglioni 74f801b689 mergin with branch beta 2021-07-27 13:18:31 +02:00
Miriam Baglioni 35e395eae8 merge with master 2021-07-27 12:34:59 +02:00
Miriam Baglioni eb07f7f40f Hosted By Map 2021-07-27 12:27:26 +02:00
Claudio Atzori bc835d2024 [cleaning] fixed filtering function for missing titles 2021-07-23 11:56:13 +02:00
Claudio Atzori ffdb2a3ea3 [cleaning] fixed filtering function for missing titles 2021-07-23 11:55:55 +02:00
Sandro La Bruzzo 62ae36a3d2 fixed NPE 2021-07-22 15:41:38 +02:00
Miriam Baglioni 63553a76b3 added code to download gold issn list from unibi 2021-07-22 12:01:48 +02:00
Sandro La Bruzzo d94565862a fixed NPE 2021-07-21 21:23:11 +02:00
Sandro La Bruzzo 31d2d6d41e Scholexplorer: introduction of dedup openaire 2021-07-21 18:09:32 +02:00
Miriam Baglioni d418c309f5 removed the part after part-x- in the file name generated by spark. It was too long and created problems while creating the tar entries 2021-07-13 17:11:49 +02:00
Sandro La Bruzzo ad50415167 Merge remote-tracking branch 'origin/stable_ids' into stable_id_scholexplorer 2021-06-24 17:20:50 +02:00
Claudio Atzori 67afd06cd1 [cleaning] cleaning instance.pid and instance.alternateidentifier using the same procedure used to clean result.pid 2021-06-24 12:10:17 +02:00
Sandro La Bruzzo cc0f2b11fb Implemented mapping from pubmed baseline to OAF 2021-06-16 14:56:24 +02:00
Claudio Atzori 2039bb9f5f orcid / orcid_pending cleaning backported from master branch 2021-06-14 09:40:50 +02:00
Claudio Atzori a900bfb874 delegating the date parsing to https://github.com/sisyphsu/dateparser 2021-06-11 16:53:01 +02:00
Claudio Atzori eb6acfbabc [cleaning] removing non parsable relation.validationDate(s) 2021-05-28 10:50:44 +02:00
Claudio Atzori 9d725efdc1 reverted implementation of the mdstore client 2021-05-20 18:26:09 +02:00
Claudio Atzori 23b8883ab1 applied intellij code cleanup 2021-05-14 10:58:12 +02:00
Claudio Atzori d4c3476152 mapping datasource.journal only when an issn is available, null otherwhise 2021-05-11 11:08:54 +02:00
Claudio Atzori d1cbee8413 imported methods from CleaningFunctions, defined in GraphCleaningFunctions 2021-05-10 16:43:39 +02:00
Claudio Atzori 3797543600 MDStoreManager model classes moved in dhp-schemas 2021-05-10 14:32:05 +02:00
Claudio Atzori b1785ba77c alternative way to set timeouts for the ISLookup client 2021-05-05 11:23:46 +02:00
Claudio Atzori 923d19ea8e mdstore read lock/unlock when bulk copying records from mongodb to hdfs 2021-05-04 18:06:21 +02:00
Claudio Atzori 91e7220f20 cleaned up workflow for actionset migration, adjusted dnet|cnr* dependency versions 2021-04-29 10:09:52 +02:00
Claudio Atzori 5afa7d3e0c core utilities in dhp-common moved in external module dhp-schemas 2021-04-27 15:44:01 +02:00
Claudio Atzori f783e60ff7 cleanup 2021-04-27 14:04:50 +02:00
Claudio Atzori 27ab8a704d adjusted poms to align with the external dhp-schema module 2021-04-27 10:12:27 +02:00
Claudio Atzori c2bb03c8b5 depending on external dhp-schemas module 2021-04-23 17:57:35 +02:00
Claudio Atzori 8704d32780 code formatting 2021-04-15 16:52:58 +02:00
Claudio Atzori ba4b4c74d8 do not make the identifier prefix depend on the Handle 2021-04-15 16:48:26 +02:00
Claudio Atzori 710cd1e8f2 Merge pull request 'add xslt, personname cleaner' (#104) from andreas.czerniak/BrStableId_dnet-hadoop:stable_ids into stable_ids
Reviewed-on: #104

LGTM
2021-04-13 14:43:05 +02:00
Claudio Atzori d1ca025b0b [cleaning] remiving authors without fullname or providing 'deactivated' keyword. Removing test test titles 2021-04-13 14:32:41 +02:00
Andreas Czerniak d7614c1f85 introduce new const 2021-04-13 07:04:27 +02:00
Claudio Atzori 902d05f548 [cleaning] avoiding NPEs handling null author PIDs 2021-04-12 17:31:40 +02:00
Claudio Atzori 72ce741ea6 WIP: using common definitions from ModelConstants 2021-03-31 17:07:13 +02:00
Claudio Atzori 27681b876c code formatting 2021-03-29 17:47:11 +02:00
miconis 2709d08fc2 Merge branch 'stable_ids' into openorgswf 2021-03-29 16:39:07 +02:00
Claudio Atzori 3becaa5539 [Cleaning] drop alternate identifiers with empty values 2021-03-29 16:01:35 +02:00
Claudio Atzori 48f2b6127e [Cleaning] drop alternate identifiers with empty values 2021-03-29 14:23:18 +02:00
miconis 2355cc4e9b minor changes and bug fix 2021-03-29 10:07:12 +02:00
Claudio Atzori b5b7dc2104 [Cleaning] drop alternate identifiers with empty values 2021-03-26 12:30:00 +01:00
Claudio Atzori 827e7e37db [Cleaning] drop instance.alternateIdentifier elements when they are available among instance.pid 2021-03-25 11:07:59 +01:00
Claudio Atzori 431cbe9955 handle missing instance.pid during bulk cleaning 2021-03-23 09:28:58 +01:00
Sandro La Bruzzo c73072079d fix conflicts 2021-03-22 16:36:31 +01:00
Claudio Atzori 3256b9c836 code formatting 2021-03-19 09:36:12 +01:00
Claudio Atzori 75144dacb3 Merge branch 'stable_ids' of https://code-repo.d4science.org/D-Net/dnet-hadoop into stable_ids 2021-03-19 09:07:40 +01:00