126 lines
9.8 KiB
XML
126 lines
9.8 KiB
XML
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<?xml version="1.0" encoding="utf-8"?>
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<!--re3data.org Schema for the Description of Research Data Repositories. Version 2.2, December 2014. doi:10.2312/re3.006-->
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<r3d:re3data xmlns:r3d="http://www.re3data.org/schema/2-2" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://www.re3data.org/schema/2-2 http://schema.re3data.org/2-2/re3dataV2-2.xsd">
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<r3d:repository>
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<r3d:re3data.orgIdentifier>r3d100014100</r3d:re3data.orgIdentifier>
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<r3d:repositoryName language="eng">Bacterial and Viral Bioinformatics Resource Center</r3d:repositoryName>
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<r3d:additionalName language="eng">BV-BRC</r3d:additionalName>
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<r3d:repositoryURL>https://www.bv-brc.org/</r3d:repositoryURL>
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<r3d:description language="eng">The Bacterial and Viral Bioinformatics Resource Center (BV-BRC) is an information system designed to support research on bacterial and viral infectious diseases. BV-BRC combines two long-running BRCs: PATRIC, the bacterial system, and IRD/ViPR, the viral systems.</r3d:description>
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<r3d:repositoryContact>help@bv-brc.org</r3d:repositoryContact>
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<r3d:type>disciplinary</r3d:type>
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<r3d:size updated=""></r3d:size>
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<r3d:startDate></r3d:startDate>
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<r3d:endDate></r3d:endDate>
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<r3d:repositoryLanguage>eng</r3d:repositoryLanguage>
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<r3d:subject subjectScheme="DFG">2 Life Sciences</r3d:subject>
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<r3d:subject subjectScheme="DFG">201 Basic Biological and Medical Research</r3d:subject>
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<r3d:subject subjectScheme="DFG">20107 Bioinformatics and Theoretical Biology</r3d:subject>
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<r3d:subject subjectScheme="DFG">204 Microbiology, Virology and Immunology</r3d:subject>
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<r3d:subject subjectScheme="DFG">20404 Virology</r3d:subject>
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<r3d:subject subjectScheme="DFG">205 Medicine</r3d:subject>
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<r3d:subject subjectScheme="DFG">20503 Human Genetics</r3d:subject>
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<r3d:subject subjectScheme="DFG">21 Biology</r3d:subject>
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<r3d:subject subjectScheme="DFG">22 Medicine</r3d:subject>
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<r3d:missionStatementURL>https://www.bv-brc.org/docs/quick_start/index.html</r3d:missionStatementURL>
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<r3d:contentType contentTypeScheme="parse">Images</r3d:contentType>
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<r3d:contentType contentTypeScheme="parse">Scientific and statistical data formats</r3d:contentType>
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<r3d:contentType contentTypeScheme="parse">Standard office documents</r3d:contentType>
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<r3d:contentType contentTypeScheme="parse">Structured graphics</r3d:contentType>
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<r3d:providerType>dataProvider</r3d:providerType>
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<r3d:providerType>serviceProvider</r3d:providerType>
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<r3d:keyword>BLAST</r3d:keyword>
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<r3d:keyword>bacterial species</r3d:keyword>
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<r3d:keyword>bioinformatics</r3d:keyword>
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<r3d:keyword>genes</r3d:keyword>
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<r3d:keyword>genomes</r3d:keyword>
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<r3d:keyword>genomics</r3d:keyword>
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<r3d:keyword>immune epitopes</r3d:keyword>
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<r3d:keyword>infectious disease</r3d:keyword>
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<r3d:keyword>proteins</r3d:keyword>
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<r3d:institution>
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<r3d:institutionName language="eng">National Institute of Allergy and Infectious Diseases</r3d:institutionName>
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<r3d:institutionAdditionalName language="eng">NIAID</r3d:institutionAdditionalName>
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<r3d:institutionCountry>USA</r3d:institutionCountry>
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<r3d:responsibilityType>funding</r3d:responsibilityType>
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<r3d:institutionType>non-profit</r3d:institutionType>
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<r3d:institutionURL>https://www.niaid.nih.gov/</r3d:institutionURL>
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<r3d:institutionIdentifier>ROR:043z4tv69</r3d:institutionIdentifier>
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<r3d:responsibilityStartDate></r3d:responsibilityStartDate>
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<r3d:responsibilityEndDate></r3d:responsibilityEndDate>
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</r3d:institution>
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<r3d:institution>
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<r3d:institutionName language="eng">National Institutes of Health</r3d:institutionName>
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<r3d:institutionAdditionalName language="eng">NIH</r3d:institutionAdditionalName>
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<r3d:institutionCountry>USA</r3d:institutionCountry>
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<r3d:responsibilityType>funding</r3d:responsibilityType>
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<r3d:institutionType>non-profit</r3d:institutionType>
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<r3d:institutionURL>https://www.nih.gov/</r3d:institutionURL>
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<r3d:institutionIdentifier>ROR:01cwqze88</r3d:institutionIdentifier>
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<r3d:responsibilityStartDate></r3d:responsibilityStartDate>
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<r3d:responsibilityEndDate></r3d:responsibilityEndDate>
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</r3d:institution>
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<r3d:institution>
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<r3d:institutionName language="eng">U.S. Department of Health and Human Services</r3d:institutionName>
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<r3d:institutionAdditionalName language="eng">HHS.gov</r3d:institutionAdditionalName>
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<r3d:institutionCountry>USA</r3d:institutionCountry>
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<r3d:responsibilityType>funding</r3d:responsibilityType>
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<r3d:institutionType>non-profit</r3d:institutionType>
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<r3d:institutionURL>https://www.hhs.gov/</r3d:institutionURL>
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<r3d:institutionIdentifier>ROR:00b9jhh55</r3d:institutionIdentifier>
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<r3d:responsibilityStartDate></r3d:responsibilityStartDate>
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<r3d:responsibilityEndDate></r3d:responsibilityEndDate>
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</r3d:institution>
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<r3d:institution>
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<r3d:institutionName language="eng">University of Chicago, Bioinformatics Resource Centers</r3d:institutionName>
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<r3d:institutionAdditionalName language="eng">BRC</r3d:institutionAdditionalName>
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<r3d:institutionCountry>USA</r3d:institutionCountry>
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<r3d:responsibilityType>general</r3d:responsibilityType>
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<r3d:responsibilityType>technical</r3d:responsibilityType>
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<r3d:institutionType>non-profit</r3d:institutionType>
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<r3d:institutionURL>https://www.niaid.nih.gov/research/bioinformatics-resource-centers</r3d:institutionURL>
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<r3d:responsibilityStartDate></r3d:responsibilityStartDate>
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<r3d:responsibilityEndDate></r3d:responsibilityEndDate>
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</r3d:institution>
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<r3d:policy>
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<r3d:policyName>Data Management and Sharing Guidelines</r3d:policyName>
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<r3d:policyURL>https://www.niaid.nih.gov/research/data-sharing-guidelines</r3d:policyURL>
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</r3d:policy>
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<r3d:policy>
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<r3d:policyName>Share and Publish</r3d:policyName>
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<r3d:policyURL>https://www.bv-brc.org/docs/quick_references/workspaces/workspace.html#creating-and-sharing-workspaces</r3d:policyURL>
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</r3d:policy>
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<r3d:databaseAccess>
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<r3d:databaseAccessType>open</r3d:databaseAccessType>
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</r3d:databaseAccess>
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<r3d:dataAccess>
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<r3d:dataAccessType>open</r3d:dataAccessType>
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</r3d:dataAccess>
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<r3d:dataAccess>
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<r3d:dataAccessType>restricted</r3d:dataAccessType>
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<r3d:dataAccessRestriction>registration</r3d:dataAccessRestriction>
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</r3d:dataAccess>
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<r3d:dataLicense>
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<r3d:dataLicenseName>other</r3d:dataLicenseName>
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<r3d:dataLicenseURL>https://www.niaid.nih.gov/research/data-sharing-guidelines</r3d:dataLicenseURL>
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</r3d:dataLicense>
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<r3d:dataUpload>
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<r3d:dataUploadType>restricted</r3d:dataUploadType>
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<r3d:dataUploadRestriction>registration</r3d:dataUploadRestriction>
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</r3d:dataUpload>
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<r3d:dataUploadLicense>
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<r3d:dataUploadLicenseName>Uploading Data</r3d:dataUploadLicenseName>
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<r3d:dataUploadLicenseURL>https://www.bv-brc.org/docs/quick_references/workspaces/data_upload.html</r3d:dataUploadLicenseURL>
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</r3d:dataUploadLicense>
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<r3d:versioning>yes</r3d:versioning>
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<r3d:api apiType="FTP">https://www.bv-brc.org/api/doc/</r3d:api>
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<r3d:api apiType="other">https://www.bv-brc.org/docs/quick_references/ftp.html</r3d:api>
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<r3d:pidSystem>none</r3d:pidSystem>
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<r3d:citationGuidelineURL>https://www.bv-brc.org/citation</r3d:citationGuidelineURL>
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<r3d:enhancedPublication>yes</r3d:enhancedPublication>
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<r3d:qualityManagement>yes</r3d:qualityManagement>
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<r3d:remarks>BV-BRC uses standardized protocols for collecting, processing, annotating, and integrating bacterial and viral data from multiple sources.</r3d:remarks>
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<r3d:entryDate>2022-12-19</r3d:entryDate>
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<r3d:lastUpdate>2022-12-21</r3d:lastUpdate>
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</r3d:repository>
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</r3d:re3data>
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