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4567 Commits

Author SHA1 Message Date
Antonis Lempesis f3c179658a datasource table creation split in steps 2024-09-30 17:12:21 +03:00
Miriam Baglioni b18ad035c1 Merge branch 'beta' of https://code-repo.d4science.org/D-Net/dnet-hadoop into beta 2024-09-30 15:10:44 +02:00
Miriam Baglioni e430826e00 [ImportOC] fix to move original folder instead of extracted ones 2024-09-30 15:10:10 +02:00
Claudio Atzori 3fcafc7ed6 Merge pull request 'Latest institutions in monitor dbs' (#472) from antonis.lempesis/dnet-hadoop:beta into beta 
Reviewed-on: D-Net/dnet-hadoop#472
 2024-09-26 09:49:01 +02:00
Miriam Baglioni 599e56dbc6 Merge branch 'beta' of https://code-repo.d4science.org/D-Net/dnet-hadoop into beta 2024-09-25 17:28:23 +02:00
Claudio Atzori 6397141e56 code formatting 2024-09-25 15:27:32 +02:00
Claudio Atzori e354f9853a [OpenCitations] move the extracted contents under a backup path to avoid needing to re-download it in case of errors 2024-09-25 15:27:02 +02:00
Sandro La Bruzzo 6a097abc89 as described on ticket #9525 
1. Changed the mapping applied to Crossref records: anything that has a relationship "is-review-of" must be mapped as publication of type "Review".
2. Force the hostedby of Crossref records with DOI prefix 10.3410 and 10.12703 to the H1 Connect data source.
 2024-09-25 11:32:54 +02:00
Michele Artini 9754521847 Merge pull request 'fixed a bug with id' (#486) from osfPreprints_plugin into beta 
Reviewed-on: D-Net/dnet-hadoop#486
 2024-09-25 10:02:24 +02:00
Michele Artini fa2532db30 fixed a bug with id 2024-09-25 09:38:50 +02:00
Michele Artini 54f8b4da39 Merge pull request 'fixed a bug with 'null' string' (#484) from osfPreprints_plugin into beta 
Reviewed-on: D-Net/dnet-hadoop#484
 2024-09-24 15:19:54 +02:00
Michele Artini b35d046fd2 fixed a bug with 'null' string 2024-09-24 15:18:54 +02:00
Claudio Atzori 4f0463d779 [graph provision] person serialisation, limit the number of authorships and coauthorships before expanding the payloads 2024-09-24 14:54:34 +02:00
Miriam Baglioni 4d3e079590 Merge remote-tracking branch 'origin/beta' into beta 2024-09-24 14:26:29 +02:00
Claudio Atzori d1cadc77c9 [graph provision] person serialisation, limit the number of authorships and coauthorships before expanding the payloads 2024-09-24 10:57:20 +02:00
Michele Artini 0e89d4a1cf fixed a bug with topic ENRICH/MORE/SUBJECT/ARXIV 2024-09-24 08:57:49 +02:00
Michele Artini e941adbe2b fixed a bug with topic ENRICH/MORE/SUBJECT/ARXIV 2024-09-24 08:57:37 +02:00
Michele Artini 7f81673f3c removed the deletedByInference=true filter 2024-09-23 15:27:43 +02:00
Michele Artini fdbe629f49 removed the deletedByInference=true filter 2024-09-23 15:27:28 +02:00
Antonis Lempesis 619aa34a15 Merge branch 'beta' of https://code-repo.d4science.org/antonis.lempesis/dnet-hadoop into beta 2024-09-23 15:25:59 +03:00
Antonis Lempesis dbea7a4072 removed duplicate line 2024-09-23 14:57:11 +03:00
Antonis Lempesis c9241dba0d Merge pull request 'convert_hive_to_spark_actions' (#1) from convert_hive_to_spark_actions into beta 
Reviewed-on: antonis.lempesis/dnet-hadoop#1
 2024-09-23 13:53:28 +02:00
Claudio Atzori e0ff84baf0 [graph provision] person serialisation, limit the number of authorships and coauthorships before expanding the payloads 2024-09-23 10:29:46 +02:00
Michele Artini 2d7a7a962d unit test @Disabled 2024-09-23 10:19:36 +02:00
Michele Artini 6b0f7cc8b0 skip urls with authentication 2024-09-23 10:16:53 +02:00
Claudio Atzori 5f86c93be6 [graph provision] person serialisation 2024-09-20 12:20:00 +02:00
Michele Artini 339d8124f2 osf plugin: links to contributors and primaty_file 2024-09-20 08:44:05 +02:00
Michele Artini 52bb7af03b use of dom4j 2024-09-19 14:59:05 +02:00
Michele Artini 9073b1159d partial implementation of osfPreprints plugin + tests 2024-09-19 13:58:53 +02:00
Michele Artini dcf09811a2 partial implementation of osfPreprints plugin 2024-09-19 12:42:45 +02:00
Claudio Atzori 23e0ab3a7c run mergeResultsOfDifferentTypes only when checkDelegatedAuthority is true 2024-09-17 15:36:10 +02:00
Claudio Atzori bfd05cdab2 run mergeResultsOfDifferentTypes only when checkDelegatedAuthority is true 2024-09-17 10:49:32 +02:00
Michele Artini a2fac78dcc fixed a problem in incremental harvesting 2024-09-17 10:16:28 +02:00
Michele Artini 99b7adda0c gtr2 unit test 2024-09-16 15:13:44 +02:00
Michele Artini bb9cee4f40 implementation of gtr2Publications plugin 2024-09-16 14:16:56 +02:00
Michele De Bonis 6df6b4583e blacklist filtering moved before the cleanup phase in order to have case sensitive regex 2024-09-16 14:04:59 +02:00
Alessia 07e6e7b4d6 #9839: include claimed affiliation relationships 2024-09-16 13:41:56 +02:00
Antonis Lempesis 37ad259296 cleanup 2024-09-05 16:02:44 +03:00
Antonis Lempesis b64c144abf added new institutions 2024-09-05 16:00:09 +03:00
Serafeim Chatzopoulos b043f8a963 Remove redundant error messages from impact indicators workflow 2024-09-04 14:28:43 +03:00
Serafeim Chatzopoulos db03f85366 Remove steps for updating BIP! from the impact indicators workflow 2024-09-04 14:25:44 +03:00
Miriam Baglioni 468f2aa5a5 [AffiliationAffRo]align beta with new affiliation from publisher webpage introduced in production. AffRo collectedfrom OpenAIRE to discriminate against WebCrawl 2024-08-12 18:10:46 +02:00
Miriam Baglioni 89fcf4086c [Person]fix issue in affiliation relation id construction for person (missing ::) 2024-08-12 18:04:43 +02:00
Miriam Baglioni 45605f93ae merging with branch beta 2024-08-12 18:03:10 +02:00
Miriam Baglioni 5a7ba77271 [Person]fix issue in affiliation relation id construction for person (missing ::) 2024-08-12 18:01:15 +02:00
Miriam Baglioni 8c185a7b1a resolving conflicts 2024-08-05 17:14:11 +02:00
Claudio Atzori e16616b964 added dataInfo to person records 2024-08-05 15:57:37 +02:00
Claudio Atzori 8e7ef79ce0 [bip affiliations] considers only DOI based records 2024-08-05 12:13:48 +02:00
Miriam Baglioni 985ca15264 [openaire-affiliation]removes matchings without DOI 2024-08-05 12:10:40 +02:00
Claudio Atzori 0bf76f2a34 [graph provision] added person to the graph2hive workflow 2024-08-05 09:35:07 +02:00
Claudio Atzori 975d44cac7 [graph provision] added person to the provision workflow 2024-08-02 16:14:10 +02:00
Claudio Atzori fecbf93e0e Merge pull request 'FoS L1 & L2' (#465) from fos_l1l2 into beta 
Reviewed-on: D-Net/dnet-hadoop#465
 2024-08-01 13:58:04 +02:00
Claudio Atzori 6bdb8643e6 ActionManager promote: allow to ingest person records in a graph that did not contain them, bumped dhp-schemas version 2024-07-31 11:02:22 +02:00
Claudio Atzori 9486e21a44 copy or process the person records throughout the graph pipeline 2024-07-30 14:25:31 +02:00
Claudio Atzori 64740475d0 depending on dhp-schemas:7.0.1 2024-07-29 11:51:42 +02:00
Miriam Baglioni 1af6571474 merging with branch beta 2024-07-25 15:48:05 +02:00
Claudio Atzori a81c555fe6 [graph provision] include only FoS L1..L2 in the record serialization 2024-07-25 15:26:47 +02:00
Claudio Atzori 359b8ebda8 [graph provision] include only FoS L1..L2 in the record serialization 2024-07-25 15:22:29 +02:00
Miriam Baglioni c7f6669f1a [webcrawl] the blacklist is now in json and no more in csv after the normalization process 2024-07-25 15:20:18 +02:00
Miriam Baglioni 7cff281d3e [webcrawl] the blacklist is now in json and no more in csv after the normalization process 2024-07-25 15:16:42 +02:00
Claudio Atzori d4bf449e8c minor 2024-07-25 14:53:06 +02:00
Miriam Baglioni fc60661ac5 [webcrawl] added code and test (code/resource) to verify the deletion of the relations related to results put in blacklist 2024-07-25 12:25:14 +02:00
Claudio Atzori d771a883f9 [dedup] updated sql query used to read organizations from the OpenOrgs DB to include their typology 2024-07-25 09:53:48 +02:00
Claudio Atzori 01958a3e07 [graph provision] addded filter to exclude records marked with datainfo.deletedbyinference = true 2024-07-24 10:00:10 +02:00
Miriam Baglioni 6f1801d7d1 [webcrawl]- 2024-07-23 17:34:48 +02:00
Miriam Baglioni 19806c2ae3 [SDG]fixed switch of methods 2024-07-23 17:12:55 +02:00
Antonis Lempesis d0590e0e49 added latest institutions 2024-07-23 15:17:15 +03:00
Antonis Lempesis 7d2c0a3723 added new institutions 2024-07-23 15:10:17 +03:00
Miriam Baglioni 62649dc5c4 merging with branch beta 2024-07-23 12:50:12 +02:00
Miriam Baglioni 9573bf576d [SDG]added code to ingest also the SDG without DOI 2024-07-23 12:47:57 +02:00
Michele Artini d27e9ea50f added ODF invisible stores in raw_all workflow 2024-07-23 09:56:27 +02:00
Michele De Bonis 4f4c73d65b minor change: addition of missing parameter in sql query 2024-07-22 15:19:02 +02:00
Miriam Baglioni 79985ad197 [Crossref]added mapping for DFG versus the unidentified project [https://support.openaire.eu/issues/9926?next_issue_id=9924&prev_issue_id=9927#note-4] 2024-07-17 18:30:24 +02:00
Claudio Atzori 06e3985b77 merged from beta 2024-07-17 12:01:40 +02:00
Claudio Atzori 83327239de fixed pom definitions, bumped dependency version for the dhp-schema module, removed unnecessary dependencies 2024-07-17 11:58:48 +02:00
Claudio Atzori db9c54c944 Revert "removed legacy actionmanager dependencies" 
This reverts commit bb12d0b4df.
 2024-07-17 11:27:43 +02:00
Claudio Atzori e39e8bbd47 Merge pull request '[WebCrawlAffiliation]remove from the creation of the action set the relations for pmc and pmid. Only doi are allowed' (#462) from affiliationFromWebCrawlOnlyDOI into beta 
Reviewed-on: D-Net/dnet-hadoop#462
 2024-07-17 11:12:32 +02:00
Claudio Atzori e94ae771ff Merge pull request '[BulkTag]added tagging for the organization relevant for the community.' (#461) from tagOrganization into beta 
Reviewed-on: D-Net/dnet-hadoop#461
 2024-07-17 11:11:52 +02:00
Claudio Atzori 78b5e4bb6f reverted changed contens under dhp-graph-provision 2024-07-17 10:48:20 +02:00
Claudio Atzori 40c5d87645 Merge pull request '[graph provision] entity level contexts' (#460) from entity_contexts into beta 
Reviewed-on: D-Net/dnet-hadoop#460
 2024-07-17 10:43:21 +02:00
Claudio Atzori a65241fcaf Merge pull request 'implementation of the new collector plugin: research_fi' (#456) from research_fi_collector_plugin into beta 
Reviewed-on: D-Net/dnet-hadoop#456
 2024-07-17 10:25:38 +02:00
Claudio Atzori 6665976604 Merge pull request 'Optimizations for the Openorgs Dedup: normalization and inference of strings and implementation of new general-purpose comparators' (#455) from openorgs_optimization into beta 
Reviewed-on: D-Net/dnet-hadoop#455
 2024-07-17 10:25:20 +02:00
Claudio Atzori c99f92efaa Merge pull request '[beta] OpenAIRE Affiliation Inference' (#452) from affRoFromRawString into beta 
Reviewed-on: D-Net/dnet-hadoop#452
 2024-07-17 10:24:39 +02:00
Claudio Atzori f17e1243ba reverted changed contens under dhp-graph-provision 2024-07-17 10:23:50 +02:00
Claudio Atzori 6a19337dab Merge pull request 'removed legacy actionmanager dependencies' (#454) from cleanup_actionmanager_deps into beta 
Reviewed-on: D-Net/dnet-hadoop#454
 2024-07-17 10:20:44 +02:00
Miriam Baglioni d96215cb9b [UnpayWall]added othe : in the identifier construction 2024-07-16 18:17:32 +02:00
Miriam Baglioni 9246bdec1c [WebCrawlAffiliation]remove from the creation of the action set the relations for pmc and pmid. Only doi are allowed 2024-07-16 14:07:37 +02:00
Miriam Baglioni 9d27910144 [BulkTag]added tagging for the organization relevant for the community. Added test. Changed the tagging variables. 2024-07-16 13:48:48 +02:00
Claudio Atzori beb93cdfe9 [graph provision] expand the context info for each entity type 2024-07-16 11:43:48 +02:00
Claudio Atzori 38f8ed27fd [graph provision] log the Solr admin application operations for alias deletion and creation 2024-07-15 16:30:43 +02:00
Claudio Atzori 1fb44198fb renamed workflow to better reflect its purpose 2024-07-15 15:24:38 +02:00
Claudio Atzori 6f6e85ddf4 code formatting 2024-07-15 09:32:04 +02:00
Claudio Atzori 7fa3d51200 renamed class, updated criteria to consider the ORCIDs used in the matchers 2024-07-15 09:18:58 +02:00
Michele Artini f99fb21040 tests 2024-07-15 09:18:46 +02:00
Claudio Atzori e17edb2581 [broker] fine tuned the workflow memory settings 2024-07-12 10:27:50 +02:00
Claudio Atzori 61d1fa9b9f [metadata collection] added -Dcom.sun.security.enableAIAcaIssuers=true as a default for metadata collection 2024-07-12 10:26:45 +02:00
Claudio Atzori f9ed2ae33c [metadata collection] added the possibility to specify the JAVA_HOME and the JAVA_OPTS parameters 2024-07-11 15:32:36 +02:00
Michele Artini bbe52584f7 log message 2024-07-11 15:14:34 +02:00
Michele Artini 5cdba9172b implementeation of the new collector plugin: research_fi 2024-07-10 14:53:13 +02:00
Michele De Bonis 2a36ccb997 optimization of normalization stage in openorgs workflow, implementation of new comparators replacing older versions, openorgs configuration update, addition of inference flag in model definition, new test classes 2024-07-09 16:58:10 +02:00