Commit Graph

145 Commits

Author SHA1 Message Date
Lampros Smyrnaios 39c36f9e66 - Resolve a concurrency issue, by enforcing synchronization on the "BulkImportReport.getJsonReport()" method.
- Increase the number of stacktrace-lines to 20, for bulkImport-segment-failures.
- Improve "GenericUtils.getSelectiveStackTrace()".
2024-05-01 01:29:25 +03:00
Lampros Smyrnaios 0d117743c2 - Code-optimization.
- Upload the updated gradle-wrapper and set using the latest Gradle version in "installAndRun.sh" script.
2024-04-30 02:13:08 +03:00
Lampros Smyrnaios 64a1b7d4f0 - Comment-out the bucket-deletion process, in order to avoid any accidental deletion, even if it has to be explicitly allowed in the config.
- Update dependencies.
2024-04-26 12:54:00 +03:00
Lampros Smyrnaios e2d43a9af0 Upgrade the "processBulkImportedFilesSegment" code:
1) Pre-calculate the file-hashes for all files of the segment and perform a single "getHashLocationsQuery", instead of thousands
2) Write some important events to the bulkImportReport file, as soon as they are added in the list.
2024-04-02 14:35:19 +03:00
Lampros Smyrnaios bd323ad69a Avoid a very rare case, where we might get an "IllegalArgumentException" from "Lists.partition()", in case the "sizeOfUrlReports" is <= 3. 2024-03-29 18:12:52 +02:00
Lampros Smyrnaios 08de530f03 Various improvements:
- Handle the case when "fileUtils.constructS3FilenameAndUploadToS3()" returns "null", in "processBulkImportedFile()".
- Avoid an "IllegalArgumentException" in "Lists.partition()" when the number of files to bulkImport are fewer than the number of threads available to handle them.
- Include the last directory's "/" divider in the fileDIR group of "FILEPATH_ID_EXTENSION" regex (renamed from "FILENAME_ID_EXTENSION").
- Fix an incomplete log-message.
- Provide the "fileLocation" argument in the "DocFileData" constructor, in "processBulkImportedFile()", even though it's not used after.
2024-03-29 17:23:01 +02:00
Lampros Smyrnaios 1d821ed803 - Prepare version for next release.
- Fix typo of not using the "OpenAireID" in the S3 location of bulkImported files. Instead, the "fileNameID" was used, which in aggregation is the OpenAireID, but not in bulk-import.
- Update dependencies.
- Code polishing.
2024-03-28 06:09:28 +02:00
Lampros Smyrnaios 8bc5cc35e2 - Optimize writing to the Bulk-import-report file.
- Show the IP of the worker which posts a "workerShutdownReport".
- Code polishing.
2024-03-22 17:50:55 +02:00
Lampros Smyrnaios b9b29dd51c Move some code from "FileUtils.getAndUploadFullTexts()" to two separate methods. 2024-03-20 16:53:03 +02:00
Lampros Smyrnaios 56d233d38e - Move the "FileUtils.mergeParquetFiles()" method to "ParquetFileUtils.mergeParquetFilesOfTable()".
- Fix a typo.
2024-03-20 15:25:19 +02:00
Lampros Smyrnaios 9b0818b535 - Add handling for additional/specific exceptions, when checking the "futures".
- Move common "ExecutionException" handling-code into its own method: "GenericUtils.getSelectedStackTraceForCausedException()".
- Avoid a double log.
- Code polishing.
2024-03-14 13:59:23 +02:00
Lampros Smyrnaios f61cae41a1 - Try to get the cause of the exception of the callable-tasks which handle the bulk-import of fileSegments.
- Fix not counting the failedSegments when an exception was thrown.
- Code polishing.
2024-03-13 12:15:59 +02:00
Lampros Smyrnaios 8f9786de09 Upgrade the algorithm for finding the previously-found fulltexts, based on their md5hash:
- Use a single query with a list of the fileHashes, instead of thousands of singe-md5hash-check queries (run at most 6 in parallel) which require a lot of I/O.
- Avoid checking multiple times the same fileHash, in case it is related with multiple payloads.
- In case of a database-error, avoid completely losing the full-texts of that worker, instead, continue processing the full-texts.
2024-03-13 11:28:37 +02:00
Lampros Smyrnaios e4540e7f3c Handle the case when a urlReports-sublist does not have any payloads inside. 2024-03-12 14:25:00 +02:00
Lampros Smyrnaios e20c5d2146 - Add error-handling for the case when no payloads could be associated with a specific url which should have been in the hashMultiMap in "addUrlReportsByMatchingRecordsFromBacklog".
- Fix not cloning the payload, before changing it and adding it in the "prefilledPayloads"-list; instead, an object-reference was used.
2024-03-11 19:48:04 +02:00
Lampros Smyrnaios 1048463ca0 - Improve error-handling in "S3ObjectStore.emptyBucket()".
- Change some log-levels.
- Code polishing.
2024-03-11 16:17:32 +02:00
Lampros Smyrnaios ce3e149a95 Improve the "emptying/deleting" process of the S3-bucket. 2024-03-11 13:34:38 +02:00
Lampros Smyrnaios 43ea64758d - Improve handling of the case when no fulltexts have been found or none of the found ones were requested from the worker, as they were already retrieved in the past.
- Show the number of files with problematic locations (if any of them exist).
- Code polishing.
2024-02-23 12:39:28 +02:00
Lampros Smyrnaios 3563fd6e2a - Try to get the cause of the exception of the callable-tasks which handle parquet-files.
- Update License.
- Update dependencies.
2024-02-07 18:34:28 +02:00
Lampros Smyrnaios 34d7a143e7 Add/improve documentation. 2024-02-01 14:37:29 +02:00
Lampros Smyrnaios 5dadb8ad2f - Optimize the "DOC_URL_FILTER"-regex, by using a non-capturing group.
- Remove an extra "File.separator" from the fulltexts-fullFilePath.
2024-01-19 15:46:23 +02:00
Lampros Smyrnaios ee1ca8966b - Avoid continuing to request workerReport-batches when from the 1st batch, the base-directory of that assignments-counter is not found.
- Update dependencies.
2024-01-15 12:57:33 +02:00
Lampros Smyrnaios 2e60128084 - Allow to easily change the por used by workers.
- Show the number of active background-tasks and bulkImportDirs, which delay the Service's shutdown.
- Update dependencies.
- Code polishing.
2023-12-19 23:31:42 +02:00
Lampros Smyrnaios d20c9a7d2e - Show the original exception thrown by the background-job, not the one thrown in the main-thread, which is useless, except from its message.
- Reduce the interval for deleting the unhandled assignments to once every 3 days.
- Set the upcoming version.
- Update dependencies.
2023-11-27 18:19:53 +02:00
Lampros Smyrnaios 7f789b8ad0 - If we receive an "UnknownHostException" when uploading to the S3ObjectStore, then skip the current full-texts' batch to leave some time for the network to get unstuck.
- Code polishing.
2023-11-22 15:29:18 +02:00
Lampros Smyrnaios 856c62887d - Make sure the "UTF_8" charset is used, when we get a message from the response-body.
- Improve some log-messages.
2023-10-26 11:44:23 +03:00
Lampros Smyrnaios 0c7bf6357b - Improve performance in "FileUtils.addUrlReportsByMatchingRecordsFromBacklog()".
- Make sure we remove the assignments of all "not-successful", old, worker-reports, even for the ones which failed to be renamed to indicate success or failure, or failed to be executed by the background threads (and thus never reached the renaming stage).
2023-10-23 12:21:42 +03:00
Lampros Smyrnaios a7581335f1 - Improve the "getDataForPayloadPrefillQuery".
- Improve some error-messages.
2023-10-21 11:31:31 +03:00
Lampros Smyrnaios df0ea62a5a - Handle the case when the "webHDFSBaseUrl" does not use HTTPS.
- Improve error-reporting when uploading a file to HDFS.
2023-10-19 11:59:37 +03:00
Lampros Smyrnaios 40729c6295 Move similar code into the new "ParquetFileUtils.getPayloadParquetRecord()" method. 2023-10-17 12:50:51 +03:00
Lampros Smyrnaios f05eee7569 Improve the names of some methods. 2023-10-16 23:39:43 +03:00
Lampros Smyrnaios a354da763d - Improve some log-messages.
- Increase app's version.
- Code polishing.
2023-10-06 17:28:54 +03:00
Lampros Smyrnaios 96c11ba4b8 - Add a missing change.
- Code optimization and polishing.
- Update dependencies.
2023-10-04 16:17:12 +03:00
Lampros Smyrnaios 7019f7c3c7 Improve aggregation speed, by generating additional "attempt" and "payload" records for the publications which are in the back-log and their url matches to one of the urls of the current payloads. 2023-10-04 15:43:31 +03:00
Lampros Smyrnaios c9626de120 Handle the case when the "upload-file-to-S3" operation fails with a "ConnectException". In this case, all remaining upload operations for the files of that particular batch or segment, are canceled. 2023-10-04 13:01:13 +03:00
Lampros Smyrnaios 865926fbc3 - Handle the case when some results have been found from the "getAssignmentsQuery", but no data could be extracted from them.
- Code polishing.
2023-10-02 15:46:55 +03:00
Lampros Smyrnaios ede7ca5a89 - Add bulk-import support for non-Authoritative data-sources.
- Update Spring Boot.
- Code polishing.
2023-09-26 18:02:48 +03:00
Lampros Smyrnaios 0f5d4dac78 Check and show warning/error message for failed payloads. 2023-09-20 17:38:22 +03:00
Lampros Smyrnaios 903c3e1ffc Add thread-safety when reading the bulkImportReport-files. 2023-09-15 11:54:32 +03:00
Lampros Smyrnaios 360731ba72 - Improve handling of the "NO_CONTENT" case, in "getAssignments"-endpoint.
- Code optimization and polishing.
2023-09-14 13:53:01 +03:00
Lampros Smyrnaios 6891c467d4 - Avoid displaying a warning for the "test" HDFS directory, when the Controller is running in PROD mode.
- Add a missing change for the optimization of reading files.
- Update dependencies.
2023-09-13 15:29:30 +03:00
Lampros Smyrnaios ee2df19ce1 - Allow "pretty-printing" the json response of the "getBulkImportReport" endpoint.
- Add useful log-messages for various bulk-import stages and improve the current ones.
- Optimize reading and writing the reports.
2023-09-11 17:24:39 +03:00
Lampros Smyrnaios 1c8f3765ca - Fix not acquiring the full workerReport when retrying it, with the scheduler.
- Improve error-handling in the "inspectWorkerReportsAndTakeAction" process.
- Code polishing.
2023-09-08 14:59:48 +03:00
Lampros Smyrnaios 4014d1eabb Code polishing. 2023-09-05 15:20:03 +03:00
Lampros Smyrnaios 98516498eb - Increase app's version.
- Code polishing.
2023-09-04 12:46:55 +03:00
Lampros Smyrnaios febe2b212c Upgrade management of failed workerReports:
- Upon completing processing a workerReport, the name of the json-file will be appended with "successful" or "failed".
- Avoid deleting immediately the failed workerReports.
- Add a scheduling task to process leftover failed workerReports from previous executions of the service, only once, 12 hours after startup, in order for the workers to have participated and filled the "workersInfoMap".
- Add a scheduling task to process leftover failed workerReports from the current execution, regularly.
- Fix not iterating through the workers' subDirs when checking the last-access-time of workerReports.
- Fix not deleting the assignment records from the DB, when a failed leftover workerReport gets deleted.
- Code refactoring.
2023-09-01 15:10:58 +03:00
Lampros Smyrnaios 601776e81c - Fix not handling for the case where the info about the worker in the WorkerReport, does not exist inside the "workersInfoMap", as that worker is not participating in the Service. (this case may appear in future code)
- Code polishing.
2023-08-30 17:07:51 +03:00
Lampros Smyrnaios aa3f32f3da - Make sure the given number of threads, given by the user is above zero.
- Adjust the number and size of log files.
- Update Spring Boot.
- Code polishing.
2023-08-30 14:02:54 +03:00
Lampros Smyrnaios 44459c8681 - Rename "ImpalaConnector.java" to "DatabaseConnector.java".
- Update dependencies.
- Code polishing.
2023-08-23 16:55:23 +03:00
Lampros Smyrnaios 66a5b3c7da Update Bulk-Import API:
- Increase the "numOfThreadsPerBulkImportProcedure" to 6.
- Fix Bulk import not working from a second-level subdirectory; the report-subDirectory was not created.
- Fix not returning the bulk-import-report as "application/json".
- Add useful messages for missing parameters.
- Change the HTTP-method for the "bulkImportFullTexts" endpoint to "POST".
- Show a structured json-response for the "bulkImportFullTexts" endpoint.
- Fix uncommon date-format.
- Remove single quotes from json-report, since they are returned as bytes, not characters.
- Optimize the generation of the json-bulkImport-report.
2023-07-25 11:59:47 +03:00