git-svn-id: http://svn.research-infrastructures.eu/public/d4science/gcube/trunk/data-transfer/sis-geotk-plugin@157651 82a268e6-3cf1-43bd-a215-b396298e98cf
parent
976494a484
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<assembly>
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<id>uberjar</id>
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<formats>
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<format>jar</format>
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</formats>
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<includeBaseDirectory>false</includeBaseDirectory>
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<dependencySets>
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<dependencySet>
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<unpack>false</unpack>
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<scope>runtime</scope>
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<useProjectArtifact>false</useProjectArtifact>
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</dependencySet>
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</dependencySets>
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<fileSets>
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<fileSet>
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<directory>${project.build.outputDirectory}</directory>
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<outputDirectory>.</outputDirectory>
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</fileSet>
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</fileSets>
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</assembly>
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package org.gcube.data.transfer.plugins.sis;
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public class TestGetCatalog {
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public static void main(String[] args) {
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String path="/home/gcube/tomcat/content/thredds/public/netcdf/myCatalog/CERSAT-GLO-CLIM_WIND_L4-OBS_FULL_TIME_SERIE_CLIMATOLOGY_METEOROLOGY_ATMOSPHERE_1366217956317.nc";
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String publicLocation="/home/gcube/tomcat/content/thredds/public/netcdf/";
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System.out.println(SisPlugin.getCatalogFromPath(path, publicLocation));
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}
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}
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package org.gcube.data.transfer.plugins.sis;
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import java.io.File;
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import java.io.FileInputStream;
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import java.io.FileNotFoundException;
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import java.io.FileOutputStream;
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import java.io.IOException;
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import java.io.InputStream;
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import java.io.OutputStream;
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import java.net.MalformedURLException;
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import java.net.URL;
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import java.nio.file.Files;
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import java.nio.file.StandardCopyOption;
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import java.security.MessageDigest;
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import java.security.NoSuchAlgorithmException;
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import org.apache.sis.storage.DataStoreException;
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import org.apache.sis.storage.UnsupportedStorageException;
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import org.gcube.data.transfer.model.TransferTicket.Status;
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public class TestGetMetadata {
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public static void main(String[] args) throws UnsupportedStorageException, MalformedURLException, DataStoreException {
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System.out.println(SisPlugin.getMetaFromFile(new URL("https://github.com/opengeospatial/geoapi/raw/master/geoapi-netcdf/src/test/resources/org/opengis/wrapper/netcdf/NCEP-SST.nc")));
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public static void main(String[] args) throws UnsupportedStorageException, DataStoreException, IOException, NoSuchAlgorithmException {
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File temp=File.createTempFile("temp", ".temp");
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File original=new File("/home/fabio/Downloads/oscar_vel2011_180.nc");
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File copied=File.createTempFile("copied", ".nc");
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transferStream(new FileInputStream(original),new FileOutputStream(temp));
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System.out.println("copied. Moving..");
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System.out.println("Checksum original : "+getChecksum(original));
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System.out.println("Checksum temp : "+getChecksum(temp));
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Files.move(temp.toPath(), copied.toPath(),StandardCopyOption.ATOMIC_MOVE,StandardCopyOption.REPLACE_EXISTING);
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if(copied.length()<original.length()) throw new RuntimeException("Different size after moving");
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System.out.println(SisPlugin.getMetaFromFile(copied));
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}
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private static String getChecksum(File datafile) throws NoSuchAlgorithmException, IOException {
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MessageDigest md = MessageDigest.getInstance("SHA1");
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FileInputStream fis = new FileInputStream(datafile);
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byte[] dataBytes = new byte[1024];
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int nread = 0;
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while ((nread = fis.read(dataBytes)) != -1) {
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md.update(dataBytes, 0, nread);
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};
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byte[] mdbytes = md.digest();
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//convert the byte to hex format
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StringBuffer sb = new StringBuffer("");
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for (int i = 0; i < mdbytes.length; i++) {
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sb.append(Integer.toString((mdbytes[i] & 0xff) + 0x100, 16).substring(1));
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}
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return sb.toString();
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}
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private static void transferStream(InputStream in, OutputStream out){
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long receivedTotal=0l;
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try{
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byte[] internalBuf=new byte[1024];
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int received=0;
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while ((received=in.read(internalBuf))!=-1){
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out.write(internalBuf,0,received);
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receivedTotal+=received;
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}
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out.flush();
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}catch(IOException e){
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throw new RuntimeException("Unable to read from source.");
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}
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}
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}
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