See #25460. Google Earth extensions.
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Dockerfile
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@ -8,46 +8,11 @@ LABEL org.d4science.image.licenses="EUPL-1.2" \
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# R required by vlab5 VRE https://support.d4science.org/issues/23536
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# R required by vlab5 VRE https://support.d4science.org/issues/23536
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ENV DEBIAN_FRONTEND noninteractive
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ENV DEBIAN_FRONTEND noninteractive
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# Upgrade, install some R dependencies and base python3
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# Add libcurl4-gnutls-dev and remove libcurl4-openssl-dev because
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#
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# libraptor2-dev : Depends: libcurl4-gnutls-dev but it is not installable
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RUN apt-get update --yes && \
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RUN apt-get update --yes && \
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apt-get install --yes --no-install-recommends \
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apt-get install --yes --no-install-recommends \
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libgdal-dev \
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apt-transport-https ca-certificates gnupg curl vim nano
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pandoc \
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pandoc-citeproc \
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RUN echo "deb [signed-by=/usr/share/keyrings/cloud.google.gpg] https://packages.cloud.google.com/apt cloud-sdk main" | tee -a /etc/apt/sources.list.d/google-cloud-sdk.list && curl https://packages.cloud.google.com/apt/doc/apt-key.gpg | gpg --dearmor -o /usr/share/keyrings/cloud.google.gpg && apt-get update -y && apt-get install google-cloud-sdk google-cloud-cli google-cloud-cli-app-engine-java google-cloud-cli-app-engine-python kubectl -y
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texlive-xetex \
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texlive-latex-base \
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texlive-latex-recommended \
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texlive-fonts-recommended \
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texlive-fonts-extra \
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texlive-formats-extra \
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libssl-dev \
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libxml2-dev \
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libv8-dev \
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libsecret-1-dev \
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librdf0-dev \
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libgit2-dev \
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libxslt-dev \
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librdf0 \
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redland-utils \
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rasqal-utils \
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raptor2-utils \
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libcairo2-dev \
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libpoppler-cpp-dev \
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libmagick++-dev \
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cmake \
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cargo \
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libavfilter-dev \
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libjq-dev \
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libprotobuf-dev \
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protobuf-compiler \
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libproj-dev \
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libcurl4-gnutls-dev \
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libsodium-dev \
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libudunits2-dev \
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libglpk40
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RUN mkdir -p /opt/workspace-lib
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RUN mkdir -p /opt/workspace-lib
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RUN mkdir /var/log/workspace-lib
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RUN mkdir /var/log/workspace-lib
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@ -57,8 +22,7 @@ RUN chmod 0644 /opt/workspace-lib/fuse-workspace.jar
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COPY install2r-packages.txt /rocker_scripts
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COPY install2r-packages.txt /rocker_scripts
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RUN for f in `cat /rocker_scripts/install2r-packages.txt` ; do install2.r --error --skipinstalled --ncpus -1 $f || exit 1 ; done
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RUN for f in `cat /rocker_scripts/install2r-packages.txt` ; do install2.r --error --skipinstalled --ncpus -1 $f || exit 1 ; done
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RUN installGithub.r -d TRUE -u FALSE -r https://packagemanager.rstudio.com/all/__linux__/jammy/latest r-geoflow/geoflow
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RUN installGithub.r -d TRUE -u FALSE -r https://packagemanager.rstudio.com/all/__linux__/jammy/latest r-earthengine/rgeeExtra
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RUN installGithub.r -d TRUE -u FALSE -r https://packagemanager.rstudio.com/all/__linux__/jammy/latest hrbrmstr/streamgraph
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# Rstudio settings
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# Rstudio settings
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COPY rsession.conf /etc/rstudio/rsession.conf
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COPY rsession.conf /etc/rstudio/rsession.conf
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@ -9,7 +9,7 @@ pipeline {
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label 'docker'
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label 'docker'
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}
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}
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environment {
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environment {
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imagename = "rstudio/rstudio-fisheriesatlas-vlab5"
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imagename = "rstudio/rstudio-itineris-gearth"
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hubname = "hub.dev.d4science.org"
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hubname = "hub.dev.d4science.org"
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registryUrl = "https://hub.dev.d4science.org"
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registryUrl = "https://hub.dev.d4science.org"
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registryCredential = 'cccd3cf5-9d6c-4044-85d6-59bede0c43f4'
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registryCredential = 'cccd3cf5-9d6c-4044-85d6-59bede0c43f4'
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@ -19,7 +19,7 @@ pipeline {
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stages {
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stages {
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// stage('Cloning Git') {
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// stage('Cloning Git') {
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// steps {
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// steps {
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// git([url: git_url, branch: 'fisheriesatlas-vlab5', credentialsId: '88b54962-1c0e-49cb-8155-22276860f346'])
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// git([url: git_url, branch: 'itineris_gearth', credentialsId: '88b54962-1c0e-49cb-8155-22276860f346'])
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// }
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// }
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// }
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// }
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stage('Building image') {
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stage('Building image') {
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@ -1,20 +1,4 @@
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remotes
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reticulate
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dotenv
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rgee
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here
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magick
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pbdZMQ
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nloptr
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tinytex
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rpostgis
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gargle
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googledrive
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googledrive
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gsheet
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googleCloudStorageR
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renv
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shinyWidgets
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leaflet
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leaflet.extras
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leaflet.minicharts
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leafpm
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mapedit
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xml2
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pals
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