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Refactoring service to be aligned with IS model refactorign

This commit is contained in:
Luca Frosini 2019-11-04 18:01:20 +01:00
parent 914f267c29
commit 383887e7d2
41 changed files with 902 additions and 368 deletions
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11
src/main/java/org/gcube/informationsystem/resourceregistry/dbinitialization/DatabaseEnvironment.java
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@ -16,11 +16,11 @@ import org.gcube.common.encryption.SymmetricKey;
import org.gcube.informationsystem.base.reference.AccessType;
import org.gcube.informationsystem.base.reference.ISConstants;
import org.gcube.informationsystem.base.reference.ISManageable;
import org.gcube.informationsystem.resourceregistry.context.ContextUtility;
import org.gcube.informationsystem.resourceregistry.context.security.AdminSecurityContext;
import org.gcube.informationsystem.resourceregistry.context.security.ContextSecurityContext;
import org.gcube.informationsystem.resourceregistry.context.security.SchemaSecurityContext;
import org.gcube.informationsystem.resourceregistry.context.security.SecurityContext.PermissionMode;
import org.gcube.informationsystem.resourceregistry.instances.context.ContextUtility;
import org.gcube.informationsystem.resourceregistry.security.AdminSecurityContext;
import org.gcube.informationsystem.resourceregistry.security.ContextSecurityContext;
import org.gcube.informationsystem.resourceregistry.security.SchemaSecurityContext;
import org.gcube.informationsystem.resourceregistry.security.SecurityContext.PermissionMode;
import org.gcube.informationsystem.types.reference.TypeDefinition;
import org.gcube.informationsystem.utils.discovery.ISMDiscovery;
import org.gcube.informationsystem.utils.discovery.RegistrationProvider;
@ -212,7 +212,6 @@ public class DatabaseEnvironment {
List<Package> packages = new ArrayList<Package>();
@SuppressWarnings("rawtypes")
Class<TypeDefinition> tdClz = TypeDefinition.class;
packages.add(tdClz.getPackage());

4
src/main/java/org/gcube/informationsystem/resourceregistry/dbinitialization/SchemaActionImpl.java
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@ -12,8 +12,8 @@ import org.gcube.informationsystem.model.reference.relations.ConsistsOf;
import org.gcube.informationsystem.model.reference.relations.IsRelatedTo;
import org.gcube.informationsystem.model.reference.relations.Relation;
import org.gcube.informationsystem.resourceregistry.api.exceptions.schema.SchemaAlreadyPresentException;
import org.gcube.informationsystem.resourceregistry.schema.SchemaManagement;
import org.gcube.informationsystem.resourceregistry.schema.SchemaManagementImpl;
import org.gcube.informationsystem.resourceregistry.instances.type.SchemaManagement;
import org.gcube.informationsystem.resourceregistry.instances.type.SchemaManagementImpl;
import org.gcube.informationsystem.types.TypeBinder;
import org.gcube.informationsystem.utils.discovery.SchemaAction;
import org.slf4j.Logger;

30
src/main/java/org/gcube/informationsystem/resourceregistry/er/ERManagement.java → src/main/java/org/gcube/informationsystem/resourceregistry/instances/base/ERManagement.java
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@ -1,12 +1,14 @@
package org.gcube.informationsystem.resourceregistry.er;
package org.gcube.informationsystem.resourceregistry.instances.base;
import java.io.IOException;
import java.text.DateFormat;
import java.util.ArrayList;
import java.util.Collection;
import java.util.Date;
import java.util.HashMap;
import java.util.HashSet;
import java.util.Iterator;
import java.util.List;
import java.util.Map;
import java.util.Map.Entry;
import java.util.Set;
@ -25,11 +27,12 @@ import org.gcube.informationsystem.resourceregistry.api.exceptions.NotFoundExcep
import org.gcube.informationsystem.resourceregistry.api.exceptions.ResourceRegistryException;
import org.gcube.informationsystem.resourceregistry.api.exceptions.context.ContextException;
import org.gcube.informationsystem.resourceregistry.api.exceptions.schema.SchemaException;
import org.gcube.informationsystem.resourceregistry.context.ContextUtility;
import org.gcube.informationsystem.resourceregistry.context.security.SecurityContext;
import org.gcube.informationsystem.resourceregistry.context.security.SecurityContext.PermissionMode;
import org.gcube.informationsystem.resourceregistry.dbinitialization.DatabaseEnvironment;
import org.gcube.informationsystem.resourceregistry.schema.SchemaManagementImpl;
import org.gcube.informationsystem.resourceregistry.instances.base.properties.BasePropertyManagement;
import org.gcube.informationsystem.resourceregistry.instances.context.ContextUtility;
import org.gcube.informationsystem.resourceregistry.instances.type.SchemaManagementImpl;
import org.gcube.informationsystem.resourceregistry.security.SecurityContext;
import org.gcube.informationsystem.resourceregistry.security.SecurityContext.PermissionMode;
import org.gcube.informationsystem.resourceregistry.utils.HeaderOrient;
import org.gcube.informationsystem.resourceregistry.utils.HeaderUtility;
import org.gcube.informationsystem.resourceregistry.utils.Utility;
@ -721,13 +724,9 @@ public abstract class ERManagement<ERType extends ER, El extends Element> {
switch(jsonNodeType) {
case OBJECT:
return PropertyManagement.getPropertyDocument(value);
return BasePropertyManagement.getPropertyDocument(value);
case ARRAY:
/*
* List/Set support is currently disabled due to OrientDB bug see https://github.com/orientechnologies/orientdb/issues/7354
*/
/*
List<Object> list = new ArrayList<Object>();
Iterator<JsonNode> arrayElement = value.elements();
while(arrayElement.hasNext()) {
@ -738,10 +737,13 @@ public abstract class ERManagement<ERType extends ER, El extends Element> {
}
}
return list;
*/
/*
* List/Set support is currently disabled due to OrientDB bug see https://github.com/orientechnologies/orientdb/issues/7354
*
throw new UnsupportedDataTypeException(
"List/Set support is currently disabled due to OrientDB bug see https://github.com/orientechnologies/orientdb/issues/7354");
*/
case BINARY:
break;
@ -870,7 +872,6 @@ public abstract class ERManagement<ERType extends ER, El extends Element> {
/*
* List/Set support is currently disabled due to OrientDB bug see https://github.com/orientechnologies/orientdb/issues/7354
*/
/*
if(object instanceof Set) {
((OrientElement) element).setProperty(key, object, OType.EMBEDDEDSET);
set = true;
@ -879,7 +880,6 @@ public abstract class ERManagement<ERType extends ER, El extends Element> {
((OrientElement) element).setProperty(key, object, OType.EMBEDDEDLIST);
set = true;
}
*/
if(!set) {
element.setProperty(key, object);
@ -938,7 +938,7 @@ public abstract class ERManagement<ERType extends ER, El extends Element> {
if(object instanceof ODocument) {
ODocument oDocument = (ODocument) object;
return PropertyManagement.getJsonNode(oDocument);
return BasePropertyManagement.getJsonNode(oDocument);
}
if(object instanceof Date) {

19
src/main/java/org/gcube/informationsystem/resourceregistry/er/ERManagementUtility.java → src/main/java/org/gcube/informationsystem/resourceregistry/instances/base/ERManagementUtility.java
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@ -1,4 +1,4 @@
package org.gcube.informationsystem.resourceregistry.er;
package org.gcube.informationsystem.resourceregistry.instances.base;
import java.util.UUID;
@ -12,14 +12,14 @@ import org.gcube.informationsystem.model.reference.relations.IsRelatedTo;
import org.gcube.informationsystem.model.reference.relations.Relation;
import org.gcube.informationsystem.resourceregistry.api.exceptions.NotFoundException;
import org.gcube.informationsystem.resourceregistry.api.exceptions.ResourceRegistryException;
import org.gcube.informationsystem.resourceregistry.context.security.SecurityContext;
import org.gcube.informationsystem.resourceregistry.er.entity.EntityManagement;
import org.gcube.informationsystem.resourceregistry.er.entity.FacetManagement;
import org.gcube.informationsystem.resourceregistry.er.entity.ResourceManagement;
import org.gcube.informationsystem.resourceregistry.er.relation.ConsistsOfManagement;
import org.gcube.informationsystem.resourceregistry.er.relation.IsRelatedToManagement;
import org.gcube.informationsystem.resourceregistry.er.relation.RelationManagement;
import org.gcube.informationsystem.resourceregistry.schema.SchemaManagementImpl;
import org.gcube.informationsystem.resourceregistry.instances.model.entity.EntityManagement;
import org.gcube.informationsystem.resourceregistry.instances.model.entity.FacetManagement;
import org.gcube.informationsystem.resourceregistry.instances.model.entity.ResourceManagement;
import org.gcube.informationsystem.resourceregistry.instances.model.relation.ConsistsOfManagement;
import org.gcube.informationsystem.resourceregistry.instances.model.relation.IsRelatedToManagement;
import org.gcube.informationsystem.resourceregistry.instances.model.relation.RelationManagement;
import org.gcube.informationsystem.resourceregistry.instances.type.SchemaManagementImpl;
import org.gcube.informationsystem.resourceregistry.security.SecurityContext;
import org.gcube.informationsystem.resourceregistry.utils.Utility;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;
@ -42,6 +42,7 @@ public class ERManagementUtility {
private static Logger logger = LoggerFactory.getLogger(EntityManagement.class);
public static AccessType getBaseAccessType(String type) throws ResourceRegistryException {
OClass oClass = SchemaManagementImpl.getTypeSchema(type, null);
if(oClass.isSubClassOf(Resource.NAME)) {

173
src/main/java/org/gcube/informationsystem/resourceregistry/instances/base/entities/BaseEntityManagement.java Normal file
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@ -0,0 +1,173 @@
package org.gcube.informationsystem.resourceregistry.instances.base.entities;
import java.util.HashMap;
import java.util.Map;
import org.gcube.informationsystem.base.reference.AccessType;
import org.gcube.informationsystem.base.reference.entities.BaseEntity;
import org.gcube.informationsystem.resourceregistry.api.exceptions.AvailableInAnotherContextException;
import org.gcube.informationsystem.resourceregistry.api.exceptions.NotFoundException;
import org.gcube.informationsystem.resourceregistry.api.exceptions.ResourceRegistryException;
import org.gcube.informationsystem.resourceregistry.api.exceptions.entity.EntityAlreadyPresentException;
import org.gcube.informationsystem.resourceregistry.instances.base.ERManagement;
import org.gcube.informationsystem.resourceregistry.instances.base.ERManagementUtility;
import org.gcube.informationsystem.resourceregistry.instances.base.relations.BaseRelationManagement;
import org.gcube.informationsystem.resourceregistry.security.SecurityContext;
import org.gcube.informationsystem.resourceregistry.utils.Utility;
import com.fasterxml.jackson.databind.JsonNode;
import com.fasterxml.jackson.databind.ObjectMapper;
import com.fasterxml.jackson.databind.node.ArrayNode;
import com.fasterxml.jackson.databind.node.ObjectNode;
import com.tinkerpop.blueprints.Edge;
import com.tinkerpop.blueprints.Element;
import com.tinkerpop.blueprints.Vertex;
import com.tinkerpop.blueprints.impls.orient.OrientGraph;
import com.tinkerpop.blueprints.impls.orient.OrientVertex;
/**
* @author Luca Frosini (ISTI - CNR)
*/
public abstract class BaseEntityManagement<E extends BaseEntity> extends ERManagement<E,Vertex> {
/**
* Provide a cache edge-internal-id -> RelationManagement
* this avoid to recreate the relationManagement of already visited edges
*/
@SuppressWarnings("rawtypes")
protected Map<String,BaseRelationManagement> relationManagements;
protected BaseEntityManagement(AccessType accessType) {
super(accessType);
this.ignoreKeys.add(BaseEntity.HEADER_PROPERTY);
this.ignoreStartWithKeys.add(OrientVertex.CONNECTION_IN_PREFIX.toLowerCase());
this.ignoreStartWithKeys.add(OrientVertex.CONNECTION_OUT_PREFIX.toLowerCase());
this.ignoreStartWithKeys.add(OrientVertex.CONNECTION_IN_PREFIX.toUpperCase());
this.ignoreStartWithKeys.add(OrientVertex.CONNECTION_OUT_PREFIX.toUpperCase());
this.relationManagements = new HashMap<>();
}
protected BaseEntityManagement(AccessType accessType, SecurityContext workingContext, OrientGraph orientGraph) {
this(accessType);
this.orientGraph = orientGraph;
setWorkingContext(workingContext);
}
@SuppressWarnings("rawtypes")
/*
* It works perfectly in case of any kind of update. In case of use from create
* the cache does not work by using the ID because until commit the edge has a
* fake id starting with - (minus) sign. This not imply any collateral effect
* but a better solution is a desiderata.
*/
protected BaseRelationManagement getBaseRelationManagement(Edge edge) throws ResourceRegistryException {
String id = edge.getId().toString();
BaseRelationManagement relationManagement = relationManagements.get(id);
if(relationManagement == null) {
relationManagement = ERManagementUtility.getRelationManagement(getWorkingContext(), orientGraph, edge);
relationManagements.put(id, relationManagement);
}
return relationManagement;
}
protected void addToRelationManagement(@SuppressWarnings("rawtypes") BaseRelationManagement baseRelationManagement)
throws ResourceRegistryException {
Element elem = baseRelationManagement.getElement();
String id = elem.getId().toString();
if(relationManagements.get(id) != null && relationManagements.get(id) != baseRelationManagement) {
StringBuilder errorMessage = new StringBuilder();
errorMessage.append("Two different instance of ");
errorMessage.append(baseRelationManagement.getClass().getSimpleName());
errorMessage.append(" point to the same ");
errorMessage.append(elem.getClass().getSimpleName());
errorMessage.append(". ");
errorMessage.append(Utility.SHOULD_NOT_OCCUR_ERROR_MESSAGE);
throw new ResourceRegistryException(errorMessage.toString());
}
relationManagements.put(id, baseRelationManagement);
}
protected static JsonNode addRelation(JsonNode sourceResource, JsonNode relation, String arrayKey)
throws ResourceRegistryException {
ObjectMapper objectMapper = new ObjectMapper();
ArrayNode relationArray = objectMapper.createArrayNode();
try {
if(sourceResource.has(arrayKey)) {
relationArray = (ArrayNode) sourceResource.get(arrayKey);
}
relationArray.add(relation);
((ObjectNode) sourceResource).replace(arrayKey, relationArray);
} catch(Exception e) {
throw new ResourceRegistryException(e);
}
return sourceResource;
}
protected Vertex createVertex() throws EntityAlreadyPresentException, ResourceRegistryException {
logger.trace("Going to create {} for {} ({}) using {}", Vertex.class.getSimpleName(), accessType.getName(),
elementType, jsonNode);
try {
if(oClass.isAbstract()) {
String error = String.format(
"Trying to create an instance of %s of type %s which is abstract. The operation will be aborted.",
accessType.getName(), elementType);
throw new ResourceRegistryException(error);
}
Vertex vertexEntity = orientGraph.addVertex("class:" + elementType);
try {
if(uuid != null) {
Vertex v = getElement();
if(v != null) {
String error = String.format("A %s with UUID %s already exist", elementType, uuid.toString());
throw getSpecificERAlreadyPresentException(error);
}
}
} catch(NotFoundException e) {
try {
Element el = ERManagementUtility.getAnyElementByUUID(uuid);
String error = String.format("UUID %s is already used by another %s. This is not allowed.",
uuid.toString(),
(el instanceof Vertex) ? org.gcube.informationsystem.model.reference.entities.Entity.NAME :
org.gcube.informationsystem.model.reference.relations.Relation.NAME);
throw getSpecificERAvailableInAnotherContextException(error);
} catch(NotFoundException e1) {
// OK the UUID is not already used.
}
} catch(AvailableInAnotherContextException e) {
throw e;
}
this.element = vertexEntity;
if(accessType == AccessType.RESOURCE) {
// Facet and relation are created in calling method
} else {
ERManagement.updateProperties(oClass, element, jsonNode, ignoreKeys, ignoreStartWithKeys);
}
logger.info("Created {} is {}", Vertex.class.getSimpleName(),
Utility.toJsonString((OrientVertex) element, true));
return element;
} catch(ResourceRegistryException e) {
throw e;
} catch(Exception e) {
logger.trace("Error while creating {} for {} ({}) using {}", Vertex.class.getSimpleName(),
accessType.getName(), elementType, jsonNode, e);
throw new ResourceRegistryException("Error Creating " + elementType + " with " + jsonNode, e.getCause());
}
}
}

13
src/main/java/org/gcube/informationsystem/resourceregistry/er/PropertyManagement.java → src/main/java/org/gcube/informationsystem/resourceregistry/instances/base/properties/BasePropertyManagement.java
View File

@ -1,4 +1,4 @@
package org.gcube.informationsystem.resourceregistry.er;
package org.gcube.informationsystem.resourceregistry.instances.base.properties;
import java.security.Key;
import java.util.HashSet;
@ -13,7 +13,8 @@ import org.gcube.informationsystem.model.reference.properties.Property;
import org.gcube.informationsystem.resourceregistry.api.exceptions.ResourceRegistryException;
import org.gcube.informationsystem.resourceregistry.api.exceptions.schema.SchemaNotFoundException;
import org.gcube.informationsystem.resourceregistry.dbinitialization.DatabaseEnvironment;
import org.gcube.informationsystem.resourceregistry.schema.SchemaManagementImpl;
import org.gcube.informationsystem.resourceregistry.instances.base.ERManagement;
import org.gcube.informationsystem.resourceregistry.instances.type.SchemaManagementImpl;
import org.gcube.informationsystem.resourceregistry.utils.EncryptedOrient;
import org.gcube.informationsystem.resourceregistry.utils.HeaderUtility;
import org.slf4j.Logger;
@ -28,9 +29,9 @@ import com.orientechnologies.orient.core.record.impl.ODocument;
/**
* @author Luca Frosini (ISTI - CNR)
*/
public class PropertyManagement {
public class BasePropertyManagement {
private static Logger logger = LoggerFactory.getLogger(PropertyManagement.class);
private static Logger logger = LoggerFactory.getLogger(BasePropertyManagement.class);
public static final Set<String> PROPERTY_IGNORE_KEYS;
public static final Set<String> PROPERTY_IGNORE_START_WITH_KEYS;
@ -55,7 +56,7 @@ public class PropertyManagement {
OClass oClass = null;
try {
oClass = SchemaManagementImpl.getTypeSchema(type, AccessType.PROPERTY);
oClass = SchemaManagementImpl.getTypeSchema(type, AccessType.BASE_PROPERTY);
} catch(SchemaNotFoundException e) {
throw e;
}
@ -86,8 +87,6 @@ public class PropertyManagement {
// Decrypting with Context Key (default key)
String decryptedValue = EncryptedImpl.decrypt(contextEncryptedValue);
encrypted.setDecryptedValue(decryptedValue, false);
/*

219
src/main/java/org/gcube/informationsystem/resourceregistry/instances/base/relations/BaseRelationManagement.java Normal file
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@ -0,0 +1,219 @@
package org.gcube.informationsystem.resourceregistry.instances.base.relations;
import java.util.UUID;
import org.gcube.informationsystem.base.reference.AccessType;
import org.gcube.informationsystem.base.reference.entities.BaseEntity;
import org.gcube.informationsystem.base.reference.relations.BaseRelation;
import org.gcube.informationsystem.model.reference.relations.Relation;
import org.gcube.informationsystem.resourceregistry.api.exceptions.ResourceRegistryException;
import org.gcube.informationsystem.resourceregistry.api.exceptions.relation.RelationNotFoundException;
import org.gcube.informationsystem.resourceregistry.api.exceptions.schema.SchemaException;
import org.gcube.informationsystem.resourceregistry.instances.base.ERManagement;
import org.gcube.informationsystem.resourceregistry.instances.base.entities.BaseEntityManagement;
import org.gcube.informationsystem.resourceregistry.instances.model.entity.FacetManagement;
import org.gcube.informationsystem.resourceregistry.security.SecurityContext;
import org.gcube.informationsystem.resourceregistry.utils.Utility;
import com.fasterxml.jackson.databind.JsonNode;
import com.fasterxml.jackson.databind.node.ObjectNode;
import com.tinkerpop.blueprints.Direction;
import com.tinkerpop.blueprints.Edge;
import com.tinkerpop.blueprints.Vertex;
import com.tinkerpop.blueprints.impls.orient.OrientBaseGraph;
import com.tinkerpop.blueprints.impls.orient.OrientGraph;
/**
* @author Luca Frosini (ISTI - CNR)
*/
public abstract class BaseRelationManagement<R extends BaseRelation<S, T>, SEM extends BaseEntityManagement<S>, TEM extends BaseEntityManagement<T>, S extends BaseEntity, T extends BaseEntity>
extends ERManagement<R,Edge> {
protected final Class<S> sourceEntityClass;
protected final Class<T> targetEntityClass;
protected SEM sourceEntityManagement;
protected TEM targetEntityManagement;
protected BaseRelationManagement(AccessType accessType, Class<S> sourceEntityClass, Class<T> targetEntityClass) {
super(accessType);
this.ignoreKeys.add(Relation.HEADER_PROPERTY);
this.ignoreKeys.add(Relation.SOURCE_PROPERTY);
this.ignoreKeys.add(Relation.TARGET_PROPERTY);
this.ignoreKeys.add(OrientBaseGraph.CONNECTION_OUT.toLowerCase());
this.ignoreKeys.add(OrientBaseGraph.CONNECTION_IN.toLowerCase());
this.ignoreKeys.add(OrientBaseGraph.CONNECTION_OUT.toUpperCase());
this.ignoreKeys.add(OrientBaseGraph.CONNECTION_IN.toUpperCase());
this.sourceEntityClass = sourceEntityClass;
this.targetEntityClass = targetEntityClass;
this.sourceEntityManagement = null;
this.targetEntityManagement = null;
}
protected BaseRelationManagement(AccessType accessType, Class<S> sourceEntityClass, Class<T> targetEntityClass, SecurityContext workingContext, OrientGraph orientGraph) {
this(accessType, sourceEntityClass, targetEntityClass);
this.orientGraph = orientGraph;
setWorkingContext(workingContext);
}
public SEM getSourceEntityManagement() throws ResourceRegistryException {
if(sourceEntityManagement == null) {
Vertex source = getElement().getVertex(Direction.OUT);
sourceEntityManagement = newSourceEntityManagement();
sourceEntityManagement.setElement(source);
}
sourceEntityManagement.setReload(reload);
return sourceEntityManagement;
}
public TEM getTargetEntityManagement() throws ResourceRegistryException {
if(targetEntityManagement == null) {
Vertex target = getElement().getVertex(Direction.IN);
targetEntityManagement = newTargetEntityManagement();
targetEntityManagement.setElement(target);
}
targetEntityManagement.setReload(reload);
return targetEntityManagement;
}
public void setSourceEntityManagement(SEM sourceEntityManagement) {
this.sourceEntityManagement = sourceEntityManagement;
}
public void setTargetEntityManagement(TEM targetEntityManagement) {
this.targetEntityManagement = targetEntityManagement;
}
@Override
public String serialize() throws ResourceRegistryException {
return serializeAsJson().toString();
}
@Override
public JsonNode serializeAsJson() throws ResourceRegistryException {
return serializeAsJson(true, true);
}
public JsonNode serializeAsJson(boolean includeSource, boolean includeTarget) throws ResourceRegistryException {
JsonNode relation = serializeSelfOnly();
try {
if(includeSource) {
BaseEntityManagement<S> sourceEntityManagement = getSourceEntityManagement();
((ObjectNode) relation).replace(Relation.SOURCE_PROPERTY, sourceEntityManagement.serializeSelfOnly());
}
if(includeTarget) {
BaseEntityManagement<T> targetEntityManagement = getTargetEntityManagement();
((ObjectNode) relation).replace(Relation.TARGET_PROPERTY, targetEntityManagement.serializeAsJson());
}
} catch(ResourceRegistryException e) {
logger.error("Unable to correctly serialize {}. {}", element, Utility.SHOULD_NOT_OCCUR_ERROR_MESSAGE, e);
throw e;
} catch(Exception e) {
logger.error("Unable to correctly serialize {}. {}", element, Utility.SHOULD_NOT_OCCUR_ERROR_MESSAGE, e);
throw new ResourceRegistryException(e);
}
return relation;
}
@Override
protected Edge reallyCreate() throws ResourceRegistryException {
if(sourceEntityManagement == null) {
if(!jsonNode.has(Relation.SOURCE_PROPERTY)) {
throw new ResourceRegistryException("Error while creating relation. No source definition found");
}
UUID sourceUUID = org.gcube.informationsystem.utils.Utility
.getUUIDFromJsonNode(jsonNode.get(Relation.SOURCE_PROPERTY));
sourceEntityManagement = newSourceEntityManagement();
sourceEntityManagement.setUUID(sourceUUID);
}
if(targetEntityManagement == null) {
targetEntityManagement = newTargetEntityManagement();
if(!jsonNode.has(Relation.TARGET_PROPERTY)) {
throw new ResourceRegistryException(
"Error while creating " + elementType + ". No target definition found");
}
try {
targetEntityManagement.setJsonNode(jsonNode.get(Relation.TARGET_PROPERTY));
} catch(SchemaException e) {
StringBuilder errorMessage = new StringBuilder();
errorMessage.append("A ");
errorMessage.append(elementType);
errorMessage.append(" can be only created beetween ");
errorMessage.append(sourceEntityManagement.getAccessType().getName());
errorMessage.append(" and ");
errorMessage.append(targetEntityManagement.getAccessType().getName());
throw new ResourceRegistryException(errorMessage.toString(), e);
}
try {
targetEntityManagement.getElement();
} catch(Exception e) {
targetEntityManagement.internalCreate();
}
}
logger.trace("Creating {} beetween {} -> {}", elementType, getSourceEntityManagement().serialize(),
getTargetEntityManagement().serialize());
Vertex source = (Vertex) getSourceEntityManagement().getElement();
Vertex target = (Vertex) getTargetEntityManagement().getElement();
element = orientGraph.addEdge(null, source, target, elementType);
ERManagement.updateProperties(oClass, element, jsonNode, ignoreKeys, ignoreStartWithKeys);
return element;
}
protected abstract SEM newSourceEntityManagement() throws ResourceRegistryException;
protected abstract TEM newTargetEntityManagement() throws ResourceRegistryException;
@Override
protected Edge reallyUpdate() throws ResourceRegistryException {
logger.debug("Trying to update {} : {}", elementType, jsonNode);
Edge edge = getElement();
ERManagement.updateProperties(oClass, edge, jsonNode, ignoreKeys, ignoreStartWithKeys);
if(accessType.compareTo(AccessType.CONSISTS_OF) == 0) {
JsonNode target = jsonNode.get(Relation.TARGET_PROPERTY);
if(target != null) {
FacetManagement fm = new FacetManagement(getWorkingContext(), orientGraph);
fm.setJsonNode(target);
fm.internalUpdate();
}
}
logger.info("{} {} successfully updated", elementType, jsonNode);
return edge;
}
@Override
protected boolean reallyDelete() throws RelationNotFoundException, ResourceRegistryException {
logger.debug("Going to remove {} with UUID {}. Related {}s will be detached.", accessType.getName(), uuid,
targetEntityClass.getSimpleName());
getElement().remove();
return true;
}
}

8
src/main/java/org/gcube/informationsystem/resourceregistry/context/ContextUtility.java → src/main/java/org/gcube/informationsystem/resourceregistry/instances/context/ContextUtility.java
View File

@ -1,4 +1,4 @@
package org.gcube.informationsystem.resourceregistry.context;
package org.gcube.informationsystem.resourceregistry.instances.context;
import java.util.HashMap;
import java.util.Iterator;
@ -16,10 +16,10 @@ import org.gcube.informationsystem.context.reference.relations.IsParentOf;
import org.gcube.informationsystem.resourceregistry.api.exceptions.ResourceRegistryException;
import org.gcube.informationsystem.resourceregistry.api.exceptions.context.ContextException;
import org.gcube.informationsystem.resourceregistry.api.exceptions.context.ContextNotFoundException;
import org.gcube.informationsystem.resourceregistry.context.security.AdminSecurityContext;
import org.gcube.informationsystem.resourceregistry.context.security.SecurityContext;
import org.gcube.informationsystem.resourceregistry.context.security.SecurityContext.PermissionMode;
import org.gcube.informationsystem.resourceregistry.dbinitialization.DatabaseEnvironment;
import org.gcube.informationsystem.resourceregistry.security.AdminSecurityContext;
import org.gcube.informationsystem.resourceregistry.security.SecurityContext;
import org.gcube.informationsystem.resourceregistry.security.SecurityContext.PermissionMode;
import org.gcube.informationsystem.resourceregistry.utils.Utility;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;

24
src/main/java/org/gcube/informationsystem/resourceregistry/context/ContextManagement.java → src/main/java/org/gcube/informationsystem/resourceregistry/instances/context/entities/ContextManagement.java
View File

@ -1,4 +1,4 @@
package org.gcube.informationsystem.resourceregistry.context;
package org.gcube.informationsystem.resourceregistry.instances.context.entities;
import java.util.Iterator;
import java.util.UUID;
@ -15,10 +15,12 @@ import org.gcube.informationsystem.resourceregistry.api.exceptions.context.Conte
import org.gcube.informationsystem.resourceregistry.api.exceptions.context.ContextException;
import org.gcube.informationsystem.resourceregistry.api.exceptions.context.ContextNotFoundException;
import org.gcube.informationsystem.resourceregistry.api.exceptions.entity.EntityAvailableInAnotherContextException;
import org.gcube.informationsystem.resourceregistry.context.security.SecurityContext;
import org.gcube.informationsystem.resourceregistry.dbinitialization.DatabaseEnvironment;
import org.gcube.informationsystem.resourceregistry.er.ERManagement;
import org.gcube.informationsystem.resourceregistry.er.entity.EntityManagement;
import org.gcube.informationsystem.resourceregistry.instances.base.ERManagement;
import org.gcube.informationsystem.resourceregistry.instances.base.entities.BaseEntityManagement;
import org.gcube.informationsystem.resourceregistry.instances.context.ContextUtility;
import org.gcube.informationsystem.resourceregistry.instances.context.relations.IsParentOfManagement;
import org.gcube.informationsystem.resourceregistry.security.SecurityContext;
import org.gcube.informationsystem.resourceregistry.utils.Utility;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;
@ -38,7 +40,7 @@ import com.tinkerpop.blueprints.impls.orient.OrientGraph;
/**
* @author Luca Frosini (ISTI - CNR)
*/
public class ContextManagement extends EntityManagement<Context> {
public class ContextManagement extends BaseEntityManagement<Context> {
private static Logger logger = LoggerFactory.getLogger(ContextManagement.class);
@ -408,4 +410,16 @@ public class ContextManagement extends EntityManagement<Context> {
}
}
@Override
protected boolean reallyAddToContext(SecurityContext targetSecurityContext)
throws ContextException, ResourceRegistryException {
throw new UnsupportedOperationException();
}
@Override
protected boolean reallyRemoveFromContext(SecurityContext targetSecurityContext)
throws ContextException, ResourceRegistryException {
throw new UnsupportedOperationException();
}
}

100
src/main/java/org/gcube/informationsystem/resourceregistry/context/IsParentOfManagement.java → src/main/java/org/gcube/informationsystem/resourceregistry/instances/context/relations/IsParentOfManagement.java
View File

@ -1,22 +1,20 @@
package org.gcube.informationsystem.resourceregistry.context;
import java.util.UUID;
package org.gcube.informationsystem.resourceregistry.instances.context.relations;
import org.gcube.informationsystem.base.reference.AccessType;
import org.gcube.informationsystem.context.reference.entities.Context;
import org.gcube.informationsystem.context.reference.relations.IsParentOf;
import org.gcube.informationsystem.model.reference.properties.PropagationConstraint;
import org.gcube.informationsystem.model.reference.properties.PropagationConstraint.AddConstraint;
import org.gcube.informationsystem.model.reference.properties.PropagationConstraint.RemoveConstraint;
import org.gcube.informationsystem.model.reference.relations.Relation;
import org.gcube.informationsystem.resourceregistry.api.exceptions.AvailableInAnotherContextException;
import org.gcube.informationsystem.resourceregistry.api.exceptions.NotFoundException;
import org.gcube.informationsystem.resourceregistry.api.exceptions.ResourceRegistryException;
import org.gcube.informationsystem.resourceregistry.api.exceptions.context.ContextException;
import org.gcube.informationsystem.resourceregistry.api.exceptions.relation.RelationAvailableInAnotherContextException;
import org.gcube.informationsystem.resourceregistry.api.exceptions.relation.isparentof.IsParentOfAlreadyPresentException;
import org.gcube.informationsystem.resourceregistry.api.exceptions.relation.isparentof.IsParentOfNotFoundException;
import org.gcube.informationsystem.resourceregistry.context.security.SecurityContext;
import org.gcube.informationsystem.resourceregistry.dbinitialization.DatabaseEnvironment;
import org.gcube.informationsystem.resourceregistry.er.relation.RelationManagement;
import org.gcube.informationsystem.resourceregistry.instances.base.relations.BaseRelationManagement;
import org.gcube.informationsystem.resourceregistry.instances.context.ContextUtility;
import org.gcube.informationsystem.resourceregistry.instances.context.entities.ContextManagement;
import org.gcube.informationsystem.resourceregistry.security.SecurityContext;
import org.gcube.informationsystem.resourceregistry.utils.Utility;
import com.fasterxml.jackson.databind.JsonNode;
@ -28,11 +26,10 @@ import com.tinkerpop.blueprints.impls.orient.OrientGraph;
/**
* @author Luca Frosini (ISTI - CNR)
*/
@SuppressWarnings("rawtypes")
public class IsParentOfManagement extends RelationManagement<IsParentOf,ContextManagement,ContextManagement> {
public class IsParentOfManagement extends BaseRelationManagement<IsParentOf,ContextManagement,ContextManagement, Context, Context> {
public IsParentOfManagement() {
super(AccessType.IS_PARENT_OF, null);
super(AccessType.IS_PARENT_OF, Context.class, Context.class);
}
public IsParentOfManagement(OrientGraph orientGraph) throws ResourceRegistryException {
@ -50,58 +47,11 @@ public class IsParentOfManagement extends RelationManagement<IsParentOf,ContextM
return workingContext;
}
@Override
protected void checkJsonNode() throws ResourceRegistryException {
super.checkJsonNode();
// Check propagation constraint.
if(jsonNode.has(Relation.PROPAGATION_CONSTRAINT)) {
StringBuilder message = null;
JsonNode propagationConstraint = jsonNode.get(Relation.PROPAGATION_CONSTRAINT);
if(propagationConstraint.has(PropagationConstraint.REMOVE_PROPERTY)) {
String removeProperty = propagationConstraint.get(PropagationConstraint.REMOVE_PROPERTY).asText();
RemoveConstraint removeConstraint = RemoveConstraint.valueOf(removeProperty);
if(removeConstraint != RemoveConstraint.keep) {
message = new StringBuilder();
message.append(RemoveConstraint.class.getSimpleName());
message.append(" can only be ");
message.append(RemoveConstraint.keep.name());
}
}
if(propagationConstraint.has(PropagationConstraint.ADD_PROPERTY)) {
String addProperty = propagationConstraint.get(PropagationConstraint.ADD_PROPERTY).asText();
AddConstraint addConstraint = AddConstraint.valueOf(addProperty);
if(addConstraint != AddConstraint.unpropagate) {
if(message == null) {
message = new StringBuilder();
} else {
message.append(" and ");
}
message.append(AddConstraint.class.getSimpleName());
message.append(" can only be ");
message.append(AddConstraint.unpropagate.name());
}
}
if(message != null) {
throw new ResourceRegistryException(message.toString());
}
}
}
@Override
protected IsParentOfNotFoundException getSpecificElementNotFoundException(NotFoundException e) {
return new IsParentOfNotFoundException(e.getMessage(), e.getCause());
}
@Override
protected RelationAvailableInAnotherContextException getSpecificERAvailableInAnotherContextException(
String message) {
return new RelationAvailableInAnotherContextException(message);
}
@Override
protected IsParentOfAlreadyPresentException getSpecificERAlreadyPresentException(String message) {
return new IsParentOfAlreadyPresentException(message);
@ -141,16 +91,6 @@ public class IsParentOfManagement extends RelationManagement<IsParentOf,ContextM
return relation;
}
@Override
public boolean addToContext(UUID contexUUID) throws NotFoundException, ContextException {
throw new UnsupportedOperationException();
}
@Override
public boolean removeFromContext(UUID contexUUID) throws NotFoundException, ContextException {
throw new UnsupportedOperationException();
}
@Override
protected ContextManagement newSourceEntityManagement() throws ResourceRegistryException {
return new ContextManagement(orientGraph);
@ -161,4 +101,26 @@ public class IsParentOfManagement extends RelationManagement<IsParentOf,ContextM
return new ContextManagement(orientGraph);
}
@Override
protected boolean reallyAddToContext(SecurityContext targetSecurityContext)
throws ContextException, ResourceRegistryException {
throw new UnsupportedOperationException();
}
@Override
protected boolean reallyRemoveFromContext(SecurityContext targetSecurityContext)
throws ContextException, ResourceRegistryException {
throw new UnsupportedOperationException();
}
@Override
protected AvailableInAnotherContextException getSpecificERAvailableInAnotherContextException(String message) {
throw new UnsupportedOperationException();
}
@Override
public String reallyGetAll(boolean polymorphic) throws ResourceRegistryException {
throw new UnsupportedOperationException();
}
}

15
src/main/java/org/gcube/informationsystem/resourceregistry/er/entity/EntityManagement.java → src/main/java/org/gcube/informationsystem/resourceregistry/instances/model/entity/EntityManagement.java
View File

@ -1,4 +1,4 @@
package org.gcube.informationsystem.resourceregistry.er.entity;
package org.gcube.informationsystem.resourceregistry.instances.model.entity;
import java.util.ArrayList;
import java.util.HashMap;
@ -20,11 +20,12 @@ import org.gcube.informationsystem.resourceregistry.api.exceptions.ResourceRegis
import org.gcube.informationsystem.resourceregistry.api.exceptions.context.ContextException;
import org.gcube.informationsystem.resourceregistry.api.exceptions.entity.EntityAlreadyPresentException;
import org.gcube.informationsystem.resourceregistry.api.exceptions.query.InvalidQueryException;
import org.gcube.informationsystem.resourceregistry.context.security.SecurityContext;
import org.gcube.informationsystem.resourceregistry.context.security.SecurityContext.PermissionMode;
import org.gcube.informationsystem.resourceregistry.er.ERManagement;
import org.gcube.informationsystem.resourceregistry.er.ERManagementUtility;
import org.gcube.informationsystem.resourceregistry.er.relation.RelationManagement;
import org.gcube.informationsystem.resourceregistry.instances.base.ERManagement;
import org.gcube.informationsystem.resourceregistry.instances.base.ERManagementUtility;
import org.gcube.informationsystem.resourceregistry.instances.base.entities.BaseEntityManagement;
import org.gcube.informationsystem.resourceregistry.instances.model.relation.RelationManagement;
import org.gcube.informationsystem.resourceregistry.security.SecurityContext;
import org.gcube.informationsystem.resourceregistry.security.SecurityContext.PermissionMode;
import org.gcube.informationsystem.resourceregistry.utils.Utility;
import com.fasterxml.jackson.core.JsonProcessingException;
@ -46,7 +47,7 @@ import com.tinkerpop.blueprints.impls.orient.OrientVertexType;
/**
* @author Luca Frosini (ISTI - CNR)
*/
public abstract class EntityManagement<E extends BaseEntity> extends ERManagement<E,Vertex> {
public abstract class EntityManagement<E extends BaseEntity> extends BaseEntityManagement<E> {
/**
* Provide a cache edge-internal-id -> RelationManagement

6
src/main/java/org/gcube/informationsystem/resourceregistry/er/entity/FacetManagement.java → src/main/java/org/gcube/informationsystem/resourceregistry/instances/model/entity/FacetManagement.java
View File

@ -1,4 +1,4 @@
package org.gcube.informationsystem.resourceregistry.er.entity;
package org.gcube.informationsystem.resourceregistry.instances.model.entity;
import org.gcube.informationsystem.base.reference.AccessType;
import org.gcube.informationsystem.model.reference.entities.Facet;
@ -7,8 +7,8 @@ import org.gcube.informationsystem.resourceregistry.api.exceptions.ResourceRegis
import org.gcube.informationsystem.resourceregistry.api.exceptions.entity.facet.FacetAlreadyPresentException;
import org.gcube.informationsystem.resourceregistry.api.exceptions.entity.facet.FacetAvailableInAnotherContextException;
import org.gcube.informationsystem.resourceregistry.api.exceptions.entity.facet.FacetNotFoundException;
import org.gcube.informationsystem.resourceregistry.context.security.SecurityContext;
import org.gcube.informationsystem.resourceregistry.er.ERManagement;
import org.gcube.informationsystem.resourceregistry.instances.base.ERManagement;
import org.gcube.informationsystem.resourceregistry.security.SecurityContext;
import com.fasterxml.jackson.databind.JsonNode;
import com.tinkerpop.blueprints.Vertex;

13
src/main/java/org/gcube/informationsystem/resourceregistry/er/entity/ResourceManagement.java → src/main/java/org/gcube/informationsystem/resourceregistry/instances/model/entity/ResourceManagement.java
View File

@ -1,4 +1,4 @@
package org.gcube.informationsystem.resourceregistry.er.entity;
package org.gcube.informationsystem.resourceregistry.instances.model.entity;
import java.util.Iterator;
@ -11,11 +11,11 @@ import org.gcube.informationsystem.resourceregistry.api.exceptions.ResourceRegis
import org.gcube.informationsystem.resourceregistry.api.exceptions.entity.resource.ResourceAlreadyPresentException;
import org.gcube.informationsystem.resourceregistry.api.exceptions.entity.resource.ResourceAvailableInAnotherContextException;
import org.gcube.informationsystem.resourceregistry.api.exceptions.entity.resource.ResourceNotFoundException;
import org.gcube.informationsystem.resourceregistry.context.security.SecurityContext;
import org.gcube.informationsystem.resourceregistry.context.security.SecurityContext.PermissionMode;
import org.gcube.informationsystem.resourceregistry.er.relation.ConsistsOfManagement;
import org.gcube.informationsystem.resourceregistry.er.relation.IsRelatedToManagement;
import org.gcube.informationsystem.resourceregistry.er.relation.RelationManagement;
import org.gcube.informationsystem.resourceregistry.instances.model.relation.ConsistsOfManagement;
import org.gcube.informationsystem.resourceregistry.instances.model.relation.IsRelatedToManagement;
import org.gcube.informationsystem.resourceregistry.instances.model.relation.RelationManagement;
import org.gcube.informationsystem.resourceregistry.security.SecurityContext;
import org.gcube.informationsystem.resourceregistry.security.SecurityContext.PermissionMode;
import org.gcube.informationsystem.resourceregistry.utils.Utility;
import com.fasterxml.jackson.databind.JsonNode;
@ -60,7 +60,6 @@ public class ResourceManagement extends EntityManagement<Resource> {
return serializeAsJson().toString();
}
@SuppressWarnings("unchecked")
@Override
public JsonNode serializeAsJson() throws ResourceRegistryException {

21
src/main/java/org/gcube/informationsystem/resourceregistry/er/relation/ConsistsOfManagement.java → src/main/java/org/gcube/informationsystem/resourceregistry/instances/model/relation/ConsistsOfManagement.java
View File

@ -1,7 +1,9 @@
package org.gcube.informationsystem.resourceregistry.er.relation;
package org.gcube.informationsystem.resourceregistry.instances.model.relation;
import org.gcube.informationsystem.base.reference.AccessType;
import org.gcube.informationsystem.model.impl.properties.PropagationConstraintImpl;
import org.gcube.informationsystem.model.reference.entities.Facet;
import org.gcube.informationsystem.model.reference.entities.Resource;
import org.gcube.informationsystem.model.reference.properties.PropagationConstraint;
import org.gcube.informationsystem.model.reference.properties.PropagationConstraint.AddConstraint;
import org.gcube.informationsystem.model.reference.properties.PropagationConstraint.RemoveConstraint;
@ -11,17 +13,15 @@ import org.gcube.informationsystem.resourceregistry.api.exceptions.ResourceRegis
import org.gcube.informationsystem.resourceregistry.api.exceptions.relation.consistsOf.ConsistsOfAlreadyPresentException;
import org.gcube.informationsystem.resourceregistry.api.exceptions.relation.consistsOf.ConsistsOfAvailableInAnotherContextException;
import org.gcube.informationsystem.resourceregistry.api.exceptions.relation.consistsOf.ConsistsOfNotFoundException;
import org.gcube.informationsystem.resourceregistry.context.security.SecurityContext;
import org.gcube.informationsystem.resourceregistry.er.entity.FacetManagement;
import org.gcube.informationsystem.resourceregistry.er.entity.ResourceManagement;
import org.gcube.informationsystem.resourceregistry.instances.model.entity.FacetManagement;
import org.gcube.informationsystem.resourceregistry.security.SecurityContext;
import com.tinkerpop.blueprints.impls.orient.OrientGraph;
/**
* @author Luca Frosini (ISTI - CNR)
*/
@SuppressWarnings("rawtypes")
public class ConsistsOfManagement extends RelationManagement<ConsistsOf,ResourceManagement,FacetManagement> {
public class ConsistsOfManagement extends RelationManagement<ConsistsOf<Resource, Facet>, FacetManagement, Facet> {
public static final PropagationConstraint DEFAULT_CONSISTS_OF_PC;
@ -32,11 +32,11 @@ public class ConsistsOfManagement extends RelationManagement<ConsistsOf,Resource
}
public ConsistsOfManagement() {
super(AccessType.CONSISTS_OF, DEFAULT_CONSISTS_OF_PC);
super(AccessType.CONSISTS_OF, Facet.class, DEFAULT_CONSISTS_OF_PC);
}
public ConsistsOfManagement(SecurityContext workingContext, OrientGraph orientGraph) {
super(AccessType.CONSISTS_OF, workingContext, orientGraph, DEFAULT_CONSISTS_OF_PC);
super(AccessType.CONSISTS_OF, Facet.class, workingContext, orientGraph, DEFAULT_CONSISTS_OF_PC);
}
@Override
@ -55,11 +55,6 @@ public class ConsistsOfManagement extends RelationManagement<ConsistsOf,Resource
return new ConsistsOfAlreadyPresentException(message);
}
@Override
protected ResourceManagement newSourceEntityManagement() throws ResourceRegistryException {
return new ResourceManagement(getWorkingContext(), orientGraph);
}
@Override
protected FacetManagement newTargetEntityManagement() throws ResourceRegistryException {
return new FacetManagement(getWorkingContext(), orientGraph);

19
src/main/java/org/gcube/informationsystem/resourceregistry/er/relation/IsRelatedToManagement.java → src/main/java/org/gcube/informationsystem/resourceregistry/instances/model/relation/IsRelatedToManagement.java
View File

@ -1,7 +1,8 @@
package org.gcube.informationsystem.resourceregistry.er.relation;
package org.gcube.informationsystem.resourceregistry.instances.model.relation;
import org.gcube.informationsystem.base.reference.AccessType;
import org.gcube.informationsystem.model.impl.properties.PropagationConstraintImpl;
import org.gcube.informationsystem.model.reference.entities.Resource;
import org.gcube.informationsystem.model.reference.properties.PropagationConstraint;
import org.gcube.informationsystem.model.reference.properties.PropagationConstraint.AddConstraint;
import org.gcube.informationsystem.model.reference.properties.PropagationConstraint.RemoveConstraint;
@ -11,16 +12,15 @@ import org.gcube.informationsystem.resourceregistry.api.exceptions.ResourceRegis
import org.gcube.informationsystem.resourceregistry.api.exceptions.relation.isrelatedto.IsRelatedToAlreadyPresentException;
import org.gcube.informationsystem.resourceregistry.api.exceptions.relation.isrelatedto.IsRelatedToAvailableInAnotherContextException;
import org.gcube.informationsystem.resourceregistry.api.exceptions.relation.isrelatedto.IsRelatedToNotFoundException;
import org.gcube.informationsystem.resourceregistry.context.security.SecurityContext;
import org.gcube.informationsystem.resourceregistry.er.entity.ResourceManagement;
import org.gcube.informationsystem.resourceregistry.instances.model.entity.ResourceManagement;
import org.gcube.informationsystem.resourceregistry.security.SecurityContext;
import com.tinkerpop.blueprints.impls.orient.OrientGraph;
/**
* @author Luca Frosini (ISTI - CNR)
*/
@SuppressWarnings("rawtypes")
public class IsRelatedToManagement extends RelationManagement<IsRelatedTo,ResourceManagement,ResourceManagement> {
public class IsRelatedToManagement extends RelationManagement<IsRelatedTo<Resource, Resource>, ResourceManagement, Resource> {
public static final PropagationConstraint DEFAULT_IS_RELATED_TO_PC;
@ -31,11 +31,11 @@ public class IsRelatedToManagement extends RelationManagement<IsRelatedTo,Resour
}
public IsRelatedToManagement() {
super(AccessType.IS_RELATED_TO,DEFAULT_IS_RELATED_TO_PC);
super(AccessType.IS_RELATED_TO, Resource.class, DEFAULT_IS_RELATED_TO_PC);
}
public IsRelatedToManagement(SecurityContext workingContext, OrientGraph orientGraph) {
super(AccessType.IS_RELATED_TO, workingContext, orientGraph, DEFAULT_IS_RELATED_TO_PC);
super(AccessType.IS_RELATED_TO, Resource.class, workingContext, orientGraph, DEFAULT_IS_RELATED_TO_PC);
}
@Override
@ -54,11 +54,6 @@ public class IsRelatedToManagement extends RelationManagement<IsRelatedTo,Resour
return new IsRelatedToAlreadyPresentException(message);
}
@Override
protected ResourceManagement newSourceEntityManagement() throws ResourceRegistryException {
return new ResourceManagement(getWorkingContext(), orientGraph);
}
@Override
protected ResourceManagement newTargetEntityManagement() throws ResourceRegistryException {
return new ResourceManagement(getWorkingContext(), orientGraph);

148
src/main/java/org/gcube/informationsystem/resourceregistry/er/relation/RelationManagement.java → src/main/java/org/gcube/informationsystem/resourceregistry/instances/model/relation/RelationManagement.java
View File

@ -1,4 +1,4 @@
package org.gcube.informationsystem.resourceregistry.er.relation;
package org.gcube.informationsystem.resourceregistry.instances.model.relation;
import java.util.Collection;
import java.util.HashMap;
@ -7,9 +7,7 @@ import java.util.Map;
import java.util.UUID;
import org.gcube.informationsystem.base.reference.AccessType;
import org.gcube.informationsystem.base.reference.relations.BaseRelation;
import org.gcube.informationsystem.model.reference.entities.Entity;
import org.gcube.informationsystem.model.reference.entities.Facet;
import org.gcube.informationsystem.model.reference.entities.Resource;
import org.gcube.informationsystem.model.reference.properties.PropagationConstraint;
import org.gcube.informationsystem.model.reference.properties.PropagationConstraint.AddConstraint;
@ -19,16 +17,15 @@ import org.gcube.informationsystem.resourceregistry.api.exceptions.NotFoundExcep
import org.gcube.informationsystem.resourceregistry.api.exceptions.ResourceRegistryException;
import org.gcube.informationsystem.resourceregistry.api.exceptions.context.ContextException;
import org.gcube.informationsystem.resourceregistry.api.exceptions.relation.RelationNotFoundException;
import org.gcube.informationsystem.resourceregistry.api.exceptions.schema.SchemaException;
import org.gcube.informationsystem.resourceregistry.context.ContextUtility;
import org.gcube.informationsystem.resourceregistry.context.IsParentOfManagement;
import org.gcube.informationsystem.resourceregistry.context.security.SecurityContext;
import org.gcube.informationsystem.resourceregistry.context.security.SecurityContext.PermissionMode;
import org.gcube.informationsystem.resourceregistry.er.ERManagement;
import org.gcube.informationsystem.resourceregistry.er.ERManagementUtility;
import org.gcube.informationsystem.resourceregistry.er.entity.EntityManagement;
import org.gcube.informationsystem.resourceregistry.er.entity.FacetManagement;
import org.gcube.informationsystem.resourceregistry.er.entity.ResourceManagement;
import org.gcube.informationsystem.resourceregistry.instances.base.ERManagement;
import org.gcube.informationsystem.resourceregistry.instances.base.ERManagementUtility;
import org.gcube.informationsystem.resourceregistry.instances.base.relations.BaseRelationManagement;
import org.gcube.informationsystem.resourceregistry.instances.context.ContextUtility;
import org.gcube.informationsystem.resourceregistry.instances.model.entity.EntityManagement;
import org.gcube.informationsystem.resourceregistry.instances.model.entity.FacetManagement;
import org.gcube.informationsystem.resourceregistry.instances.model.entity.ResourceManagement;
import org.gcube.informationsystem.resourceregistry.security.SecurityContext;
import org.gcube.informationsystem.resourceregistry.security.SecurityContext.PermissionMode;
import org.gcube.informationsystem.resourceregistry.utils.PropagationConstraintOrient;
import org.gcube.informationsystem.resourceregistry.utils.Utility;
import org.gcube.informationsystem.utils.ISMapper;
@ -42,7 +39,6 @@ import com.orientechnologies.orient.core.record.impl.ODocument;
import com.tinkerpop.blueprints.Direction;
import com.tinkerpop.blueprints.Edge;
import com.tinkerpop.blueprints.Vertex;
import com.tinkerpop.blueprints.impls.orient.OrientBaseGraph;
import com.tinkerpop.blueprints.impls.orient.OrientEdge;
import com.tinkerpop.blueprints.impls.orient.OrientElement;
import com.tinkerpop.blueprints.impls.orient.OrientGraph;
@ -50,50 +46,19 @@ import com.tinkerpop.blueprints.impls.orient.OrientGraph;
/**
* @author Luca Frosini (ISTI - CNR)
*/
@SuppressWarnings("rawtypes")
public abstract class RelationManagement<R extends BaseRelation, S extends EntityManagement, T extends EntityManagement>
extends ERManagement<R,Edge> {
protected final Class<? extends Entity> targetEntityClass;
protected S sourceEntityManagement;
protected T targetEntityManagement;
public abstract class RelationManagement<R extends Relation<Resource, TE>, T extends EntityManagement<TE>, TE extends Entity>
extends BaseRelationManagement<R, ResourceManagement, T, Resource, TE>{
public final PropagationConstraint defaultPropagationConstraint;
protected RelationManagement(AccessType accessType, PropagationConstraint defaultPropagationConstraint) {
super(accessType);
this.ignoreKeys.add(Relation.HEADER_PROPERTY);
this.ignoreKeys.add(Relation.TARGET_PROPERTY);
this.ignoreKeys.add(Relation.SOURCE_PROPERTY);
this.ignoreKeys.add(OrientBaseGraph.CONNECTION_IN.toLowerCase());
this.ignoreKeys.add(OrientBaseGraph.CONNECTION_OUT.toLowerCase());
this.ignoreKeys.add(OrientBaseGraph.CONNECTION_IN.toUpperCase());
this.ignoreKeys.add(OrientBaseGraph.CONNECTION_OUT.toUpperCase());
switch(accessType) {
case CONSISTS_OF:
this.targetEntityClass = Facet.class;
break;
case IS_RELATED_TO:
this.targetEntityClass = Resource.class;
break;
default:
this.targetEntityClass = Resource.class;
break;
}
this.sourceEntityManagement = null;
this.targetEntityManagement = null;
protected RelationManagement(AccessType accessType, Class<TE> targetEntityClass, PropagationConstraint defaultPropagationConstraint) {
super(accessType, Resource.class, targetEntityClass);
this.defaultPropagationConstraint = defaultPropagationConstraint;
}
protected RelationManagement(AccessType accessType, SecurityContext workingContext, OrientGraph orientGraph,
protected RelationManagement(AccessType accessType, Class<TE> targetEntityClass, SecurityContext workingContext, OrientGraph orientGraph,
PropagationConstraint defaultPropagationConstraint) {
this(accessType, defaultPropagationConstraint);
this(accessType, targetEntityClass, defaultPropagationConstraint);
this.orientGraph = orientGraph;
setWorkingContext(workingContext);
}
@ -103,12 +68,11 @@ public abstract class RelationManagement<R extends BaseRelation, S extends Entit
* sourceEntityManagement is the same of the instance is creating this
* RelationManagement. TODO Look for a workaround
*/
public S giveMeSourceEntityManagementAsIs() throws ResourceRegistryException {
public ResourceManagement giveMeSourceEntityManagementAsIs() throws ResourceRegistryException {
return sourceEntityManagement;
}
@SuppressWarnings("unchecked")
public S getSourceEntityManagement() throws ResourceRegistryException {
public ResourceManagement getSourceEntityManagement() throws ResourceRegistryException {
if(sourceEntityManagement == null) {
Vertex source = getElement().getVertex(Direction.OUT);
sourceEntityManagement = newSourceEntityManagement();
@ -118,7 +82,6 @@ public abstract class RelationManagement<R extends BaseRelation, S extends Entit
return sourceEntityManagement;
}
@SuppressWarnings("unchecked")
public T getTargetEntityManagement() throws ResourceRegistryException {
if(targetEntityManagement == null) {
Vertex target = getElement().getVertex(Direction.IN);
@ -129,8 +92,8 @@ public abstract class RelationManagement<R extends BaseRelation, S extends Entit
return targetEntityManagement;
}
public void setSourceEntityManagement(S sourceEntityManagement) {
this.sourceEntityManagement = sourceEntityManagement;
public void setSourceEntityManagement(ResourceManagement resourceManagement) {
this.sourceEntityManagement = resourceManagement;
}
public void setTargetEntityManagement(T targetEntityManagement) {
@ -152,12 +115,12 @@ public abstract class RelationManagement<R extends BaseRelation, S extends Entit
try {
if(includeSource) {
EntityManagement sourceEntityManagement = getSourceEntityManagement();
EntityManagement<? extends Resource> sourceEntityManagement = getSourceEntityManagement();
((ObjectNode) relation).replace(Relation.SOURCE_PROPERTY, sourceEntityManagement.serializeSelfOnly());
}
if(includeTarget) {
EntityManagement targetEntityManagement = getTargetEntityManagement();
EntityManagement<TE> targetEntityManagement = getTargetEntityManagement();
((ObjectNode) relation).replace(Relation.TARGET_PROPERTY, targetEntityManagement.serializeAsJson());
}
@ -261,68 +224,18 @@ public abstract class RelationManagement<R extends BaseRelation, S extends Entit
@Override
protected Edge reallyCreate() throws ResourceRegistryException {
element = super.reallyCreate();
if(sourceEntityManagement == null) {
if(!jsonNode.has(Relation.SOURCE_PROPERTY)) {
throw new ResourceRegistryException("Error while creating relation. No source definition found");
}
UUID sourceUUID = org.gcube.informationsystem.utils.Utility
.getUUIDFromJsonNode(jsonNode.get(Relation.SOURCE_PROPERTY));
sourceEntityManagement = newSourceEntityManagement();
sourceEntityManagement.setUUID(sourceUUID);
}
if(targetEntityManagement == null) {
targetEntityManagement = newTargetEntityManagement();
if(!jsonNode.has(Relation.TARGET_PROPERTY)) {
throw new ResourceRegistryException(
"Error while creating " + elementType + ". No target definition found");
}
try {
targetEntityManagement.setJsonNode(jsonNode.get(Relation.TARGET_PROPERTY));
} catch(SchemaException e) {
StringBuilder errorMessage = new StringBuilder();
errorMessage.append("A ");
errorMessage.append(elementType);
errorMessage.append(" can be only created beetween ");
errorMessage.append(sourceEntityManagement.getAccessType().getName());
errorMessage.append(" and ");
errorMessage.append(targetEntityManagement.getAccessType().getName());
throw new ResourceRegistryException(errorMessage.toString(), e);
}
try {
targetEntityManagement.getElement();
} catch(Exception e) {
targetEntityManagement.internalCreate();
}
}
logger.trace("Creating {} beetween {} -> {}", elementType, getSourceEntityManagement().serialize(),
getTargetEntityManagement().serialize());
Vertex source = (Vertex) getSourceEntityManagement().getElement();
Vertex target = (Vertex) getTargetEntityManagement().getElement();
element = orientGraph.addEdge(null, source, target, elementType);
ERManagement.updateProperties(oClass, element, jsonNode, ignoreKeys, ignoreStartWithKeys);
if(!(this instanceof IsParentOfManagement)) {
checkPropagationConstraint();
}
logger.info("{} successfully created", elementType);
return element;
}
protected abstract S newSourceEntityManagement() throws ResourceRegistryException;
protected ResourceManagement newSourceEntityManagement() throws ResourceRegistryException {
return new ResourceManagement(getWorkingContext(), orientGraph);
}
protected abstract T newTargetEntityManagement() throws ResourceRegistryException;
@ -502,10 +415,9 @@ public abstract class RelationManagement<R extends BaseRelation, S extends Entit
RemoveConstraint removeConstraint = RemoveConstraint.keep;
if(! (this instanceof IsParentOfManagement)) {
try {
PropagationConstraint propagationConstraint = Utility.getPropertyDocument(PropagationConstraint.class, element,
Relation.PROPAGATION_CONSTRAINT);
PropagationConstraint propagationConstraint = Utility.getPropertyDocument(PropagationConstraint.class,
element, Relation.PROPAGATION_CONSTRAINT);
if(propagationConstraint.getRemoveConstraint() != null) {
removeConstraint = propagationConstraint.getRemoveConstraint();
} else {
@ -519,7 +431,7 @@ public abstract class RelationManagement<R extends BaseRelation, S extends Entit
logger.warn("Error while getting {} from {}. Assuming {}. {}", Relation.PROPAGATION_CONSTRAINT,
Utility.toJsonString(element, true), removeConstraint, Utility.SHOULD_NOT_OCCUR_ERROR_MESSAGE);
}
}
Vertex target = (Vertex) getTargetEntityManagement().getElement();
element.remove();
@ -558,7 +470,7 @@ public abstract class RelationManagement<R extends BaseRelation, S extends Entit
continue;
}
RelationManagement relationManagement = ERManagementUtility.getRelationManagement(getWorkingContext(),
RelationManagement<R, T, TE> relationManagement = ERManagementUtility.getRelationManagement(getWorkingContext(),
orientGraph, edge);
visitedSourceResources = relationManagement.fullSerialize(visitedSourceResources);
}

13
src/main/java/org/gcube/informationsystem/resourceregistry/schema/SchemaContextManagement.java → src/main/java/org/gcube/informationsystem/resourceregistry/instances/type/SchemaContextManagementOld.java
View File

@ -1,4 +1,4 @@
package org.gcube.informationsystem.resourceregistry.schema;
package org.gcube.informationsystem.resourceregistry.instances.type;
import java.util.Iterator;
@ -8,9 +8,9 @@ import org.gcube.informationsystem.base.reference.properties.BaseProperty;
import org.gcube.informationsystem.base.reference.relations.BaseRelation;
import org.gcube.informationsystem.resourceregistry.api.exceptions.schema.SchemaException;
import org.gcube.informationsystem.resourceregistry.api.exceptions.schema.SchemaNotFoundException;
import org.gcube.informationsystem.resourceregistry.context.ContextUtility;
import org.gcube.informationsystem.resourceregistry.context.security.AdminSecurityContext;
import org.gcube.informationsystem.resourceregistry.context.security.SecurityContext.PermissionMode;
import org.gcube.informationsystem.resourceregistry.instances.context.ContextUtility;
import org.gcube.informationsystem.resourceregistry.security.AdminSecurityContext;
import org.gcube.informationsystem.resourceregistry.security.SecurityContext.PermissionMode;
import org.gcube.informationsystem.types.TypeBinder;
import org.gcube.informationsystem.types.reference.TypeDefinition;
import org.gcube.informationsystem.types.reference.relations.RelationTypeDefinition;
@ -23,9 +23,9 @@ import com.tinkerpop.blueprints.impls.orient.OrientEdge;
import com.tinkerpop.blueprints.impls.orient.OrientGraph;
import com.tinkerpop.blueprints.impls.orient.OrientVertex;
public class SchemaContextManagement implements SchemaManagement {
public class SchemaContextManagementOld implements SchemaManagement {
private static Logger logger = LoggerFactory.getLogger(SchemaContextManagement.class);
private static Logger logger = LoggerFactory.getLogger(SchemaContextManagementOld.class);
public static final String SCHEMA = "__SCHEMA";
@ -62,7 +62,6 @@ public class SchemaContextManagement implements SchemaManagement {
AdminSecurityContext adminSecurityContext = ContextUtility.getAdminSecurityContext();
orientGraph = adminSecurityContext.getGraph(PermissionMode.WRITER);
@SuppressWarnings("rawtypes")
TypeDefinition typeDefinition = TypeBinder.deserializeTypeDefinition(json);
if(BaseEntity.class.isAssignableFrom(baseType.getTypeClass())) {

2
src/main/java/org/gcube/informationsystem/resourceregistry/schema/SchemaManagement.java → src/main/java/org/gcube/informationsystem/resourceregistry/instances/type/SchemaManagement.java
View File

@ -1,4 +1,4 @@
package org.gcube.informationsystem.resourceregistry.schema;
package org.gcube.informationsystem.resourceregistry.instances.type;
import org.gcube.informationsystem.base.reference.AccessType;
import org.gcube.informationsystem.resourceregistry.api.exceptions.schema.SchemaException;

24
src/main/java/org/gcube/informationsystem/resourceregistry/schema/SchemaManagementImpl.java → src/main/java/org/gcube/informationsystem/resourceregistry/instances/type/SchemaManagementImpl.java
View File

@ -1,7 +1,7 @@
/**
*
*/
package org.gcube.informationsystem.resourceregistry.schema;
package org.gcube.informationsystem.resourceregistry.instances.type;
import java.util.ArrayList;
import java.util.Collection;
@ -29,9 +29,9 @@ import org.gcube.informationsystem.resourceregistry.api.exceptions.schema.Schema
import org.gcube.informationsystem.resourceregistry.api.exceptions.schema.SchemaCreationException;
import org.gcube.informationsystem.resourceregistry.api.exceptions.schema.SchemaException;
import org.gcube.informationsystem.resourceregistry.api.exceptions.schema.SchemaNotFoundException;
import org.gcube.informationsystem.resourceregistry.context.ContextUtility;
import org.gcube.informationsystem.resourceregistry.context.security.AdminSecurityContext;
import org.gcube.informationsystem.resourceregistry.context.security.SecurityContext.PermissionMode;
import org.gcube.informationsystem.resourceregistry.instances.context.ContextUtility;
import org.gcube.informationsystem.resourceregistry.security.AdminSecurityContext;
import org.gcube.informationsystem.resourceregistry.security.SecurityContext.PermissionMode;
import org.gcube.informationsystem.types.Type;
import org.gcube.informationsystem.types.TypeBinder;
import org.gcube.informationsystem.types.reference.TypeDefinition;
@ -79,13 +79,13 @@ public class SchemaManagementImpl implements SchemaManagement {
}
public static OClass getTypeSchema(ODatabaseSession oDatabaseSession, String type, AccessType accessType)
throws SchemaException {
throws SchemaException, SchemaNotFoundException {
OMetadata oMetadata = oDatabaseSession.getMetadata();
OSchema oSchema = oMetadata.getSchema();
return getTypeSchema(oSchema, type, accessType);
}
public static OClass getTypeSchema(OSchema oSchema, String type, AccessType accessType) throws SchemaException {
public static OClass getTypeSchema(OSchema oSchema, String type, AccessType accessType) throws SchemaException, SchemaNotFoundException {
try {
OClass oClass = oSchema.getClass(type);
if(oClass == null) {
@ -139,7 +139,6 @@ public class SchemaManagementImpl implements SchemaManagement {
}
}
@SuppressWarnings("rawtypes")
protected static TypeDefinition getTypeDefinition(OClass oClass) throws SchemaException {
// TODO OrientSerilizatoin is not acceptable anymore since TypeDefiniton introduction
@ -174,7 +173,6 @@ public class SchemaManagementImpl implements SchemaManagement {
}
}
@SuppressWarnings({"rawtypes"})
protected static String getTypeDefinitionAsString(OClass oClass) throws SchemaException {
try {
TypeDefinition typeDefinition = getTypeDefinition(oClass);
@ -184,9 +182,8 @@ public class SchemaManagementImpl implements SchemaManagement {
}
}
@SuppressWarnings({"unchecked", "rawtypes"})
protected List<OClass> getSuperclassesAndCheckCompliancy(ODatabaseSession oDatabaseSession,
TypeDefinition typeDefinition, String baseType) throws SchemaException {
TypeDefinition typeDefinition, String baseType) throws SchemaException, SchemaNotFoundException {
Set<String> superClasses = typeDefinition.getSuperClasses();
if(baseType != null) {
@ -239,7 +236,6 @@ public class SchemaManagementImpl implements SchemaManagement {
ODatabaseSession oDatabaseSession = null;
try {
@SuppressWarnings("rawtypes")
TypeDefinition typeDefinition = null;
try {
typeDefinition = TypeBinder.deserializeTypeDefinition(jsonSchema);
@ -311,7 +307,6 @@ public class SchemaManagementImpl implements SchemaManagement {
oClass.setSuperClasses(oSuperclasses);
}
@SuppressWarnings("unchecked")
Set<PropertyDefinition> propertyDefinitions = typeDefinition.getProperties();
if(Resource.class.isAssignableFrom(baseType.getTypeClass())) {
if(propertyDefinitions != null && propertyDefinitions.size() > 0) {
@ -410,8 +405,7 @@ public class SchemaManagementImpl implements SchemaManagement {
}
}
@SuppressWarnings("unchecked")
protected <ISM extends ISManageable> String getSchema(String type, boolean includeSubtypes) throws SchemaNotFoundException, SchemaException {
protected String getSchema(String type, boolean includeSubtypes) throws SchemaNotFoundException, SchemaException {
ODatabaseSession oDatabaseSession = null;
try {
AdminSecurityContext adminSecurityContext = ContextUtility.getAdminSecurityContext();
@ -421,7 +415,7 @@ public class SchemaManagementImpl implements SchemaManagement {
OSchema oSchema = oMetadata.getSchema();
OClass baseOClass = getTypeSchema(oSchema, type, null);
List<TypeDefinition<ISM>> typeDefinitions = new ArrayList<>();
List<TypeDefinition> typeDefinitions = new ArrayList<>();
typeDefinitions.add(getTypeDefinition(baseOClass));
if(includeSubtypes) {

134
src/main/java/org/gcube/informationsystem/resourceregistry/instances/type/entities/EntityTypeDefinitionManagement.java Normal file
View File

@ -0,0 +1,134 @@
package org.gcube.informationsystem.resourceregistry.instances.type.entities;
import javax.ws.rs.NotAcceptableException;
import org.gcube.informationsystem.base.reference.AccessType;
import org.gcube.informationsystem.base.reference.entities.BaseEntity;
import org.gcube.informationsystem.resourceregistry.api.exceptions.AlreadyPresentException;
import org.gcube.informationsystem.resourceregistry.api.exceptions.AvailableInAnotherContextException;
import org.gcube.informationsystem.resourceregistry.api.exceptions.NotFoundException;
import org.gcube.informationsystem.resourceregistry.api.exceptions.ResourceRegistryException;
import org.gcube.informationsystem.resourceregistry.api.exceptions.context.ContextException;
import org.gcube.informationsystem.resourceregistry.api.exceptions.schema.SchemaNotFoundException;
import org.gcube.informationsystem.resourceregistry.dbinitialization.DatabaseEnvironment;
import org.gcube.informationsystem.resourceregistry.instances.base.ERManagement;
import org.gcube.informationsystem.resourceregistry.instances.base.entities.BaseEntityManagement;
import org.gcube.informationsystem.resourceregistry.instances.context.ContextUtility;
import org.gcube.informationsystem.resourceregistry.instances.context.entities.ContextManagement;
import org.gcube.informationsystem.resourceregistry.security.SecurityContext;
import org.gcube.informationsystem.types.reference.entities.EntityTypeDefinition;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;
import com.fasterxml.jackson.databind.JsonNode;
import com.tinkerpop.blueprints.Vertex;
import com.tinkerpop.blueprints.impls.orient.OrientGraph;
public class EntityTypeDefinitionManagement<ETD extends EntityTypeDefinition<? extends BaseEntity>> extends BaseEntityManagement<ETD> {
private static Logger logger = LoggerFactory.getLogger(ContextManagement.class);
protected String name;
private void init() {
this.elementType = EntityTypeDefinition.NAME;
}
public EntityTypeDefinitionManagement() {
super(AccessType.ENTITY_TYPE_DEFINITION);
init();
}
public EntityTypeDefinitionManagement(OrientGraph orientGraph) throws ResourceRegistryException {
this();
this.orientGraph = orientGraph;
getWorkingContext();
}
public String getName() {
if(name == null) {
if(element == null) {
if(jsonNode != null) {
name = jsonNode.get(EntityTypeDefinition.NAME_PROPERTY).asText();
}
} else {
name = element.getProperty(EntityTypeDefinition.NAME_PROPERTY);
}
}
return name;
}
@Override
protected SecurityContext getWorkingContext() throws ResourceRegistryException {
if(workingContext == null) {
workingContext = ContextUtility.getInstance()
.getSecurityContextByUUID(DatabaseEnvironment.SCHEMA_SECURITY_CONTEXT_UUID);
}
return workingContext;
}
@Override
protected SchemaNotFoundException getSpecificElementNotFoundException(NotFoundException e) {
return new SchemaNotFoundException(e.getMessage(), e.getCause());
}
@Override
protected AvailableInAnotherContextException getSpecificERAvailableInAnotherContextException(String message) {
throw new NotAcceptableException();
}
@Override
protected AlreadyPresentException getSpecificERAlreadyPresentException(String message) {
throw new NotAcceptableException();
}
@Override
public String serialize() throws ResourceRegistryException {
return serializeAsJson().toString();
}
@Override
public JsonNode serializeAsJson() throws ResourceRegistryException {
return serializeSelfOnly();
// For Resources Definition include mandatory and suggested IsRelatedTo and ConsistsOf
}
@Override
protected Vertex reallyCreate() throws AlreadyPresentException, ResourceRegistryException {
logger.debug("Going to create {} for {}", EntityTypeDefinition.NAME, getName());
return createVertex();
}
@Override
protected Vertex reallyUpdate() throws NotFoundException, ResourceRegistryException {
logger.debug("Going to update {} for {}", EntityTypeDefinition.NAME, getName());
Vertex entityTypeDefinition = getElement();
entityTypeDefinition = (Vertex) ERManagement.updateProperties(oClass, entityTypeDefinition, jsonNode, ignoreKeys, ignoreStartWithKeys);
return entityTypeDefinition;
}
@Override
protected boolean reallyDelete() throws NotFoundException, ResourceRegistryException {
logger.debug("Going to remove {} for {}", EntityTypeDefinition.NAME, getName());
getElement().remove();
return true;
}
@Override
public String reallyGetAll(boolean polymorphic) throws ResourceRegistryException {
throw new UnsupportedOperationException();
}
@Override
protected boolean reallyAddToContext(SecurityContext targetSecurityContext)
throws ContextException, ResourceRegistryException {
throw new UnsupportedOperationException();
}
@Override
protected boolean reallyRemoveFromContext(SecurityContext targetSecurityContext)
throws ContextException, ResourceRegistryException {
throw new UnsupportedOperationException();
}
}

134
src/main/java/org/gcube/informationsystem/resourceregistry/instances/type/relations/RelationTypeDefinitionManagement.java Normal file
View File

@ -0,0 +1,134 @@
package org.gcube.informationsystem.resourceregistry.instances.type.relations;
import org.gcube.informationsystem.base.reference.AccessType;
import org.gcube.informationsystem.base.reference.entities.BaseEntity;
import org.gcube.informationsystem.model.reference.relations.Relation;
import org.gcube.informationsystem.resourceregistry.api.exceptions.AvailableInAnotherContextException;
import org.gcube.informationsystem.resourceregistry.api.exceptions.NotFoundException;
import org.gcube.informationsystem.resourceregistry.api.exceptions.ResourceRegistryException;
import org.gcube.informationsystem.resourceregistry.api.exceptions.context.ContextException;
import org.gcube.informationsystem.resourceregistry.api.exceptions.relation.isparentof.IsParentOfAlreadyPresentException;
import org.gcube.informationsystem.resourceregistry.api.exceptions.relation.isparentof.IsParentOfNotFoundException;
import org.gcube.informationsystem.resourceregistry.dbinitialization.DatabaseEnvironment;
import org.gcube.informationsystem.resourceregistry.instances.base.relations.BaseRelationManagement;
import org.gcube.informationsystem.resourceregistry.instances.context.ContextUtility;
import org.gcube.informationsystem.resourceregistry.instances.context.entities.ContextManagement;
import org.gcube.informationsystem.resourceregistry.instances.type.entities.EntityTypeDefinitionManagement;
import org.gcube.informationsystem.resourceregistry.security.SecurityContext;
import org.gcube.informationsystem.resourceregistry.utils.Utility;
import org.gcube.informationsystem.types.reference.entities.EntityTypeDefinition;
import org.gcube.informationsystem.types.reference.relations.RelationTypeDefinition;
import com.fasterxml.jackson.databind.JsonNode;
import com.fasterxml.jackson.databind.node.ObjectNode;
import com.tinkerpop.blueprints.Direction;
import com.tinkerpop.blueprints.Vertex;
import com.tinkerpop.blueprints.impls.orient.OrientGraph;
public class RelationTypeDefinitionManagement<R extends RelationTypeDefinition<SETD, TETD, S, T>,
SEM extends EntityTypeDefinitionManagement<SETD>, TEM extends EntityTypeDefinitionManagement<TETD>,
SETD extends EntityTypeDefinition<S>, TETD extends EntityTypeDefinition<T>,
S extends BaseEntity, T extends BaseEntity>
extends BaseRelationManagement<R, SEM, TEM, SETD, TETD> {
@SuppressWarnings("unchecked")
public RelationTypeDefinitionManagement() {
super(AccessType.RELATION_TYPE_DEFINITION, (Class<SETD>) EntityTypeDefinition.class, (Class<TETD>) EntityTypeDefinition.class);
}
public RelationTypeDefinitionManagement(OrientGraph orientGraph) throws ResourceRegistryException {
this();
this.orientGraph = orientGraph;
getWorkingContext();
}
@Override
protected SecurityContext getWorkingContext() throws ResourceRegistryException {
if(workingContext == null) {
this.workingContext = ContextUtility.getInstance()
.getSecurityContextByUUID(DatabaseEnvironment.SCHEMA_SECURITY_CONTEXT_UUID);
}
return workingContext;
}
@Override
protected IsParentOfNotFoundException getSpecificElementNotFoundException(NotFoundException e) {
return new IsParentOfNotFoundException(e.getMessage(), e.getCause());
}
@Override
protected IsParentOfAlreadyPresentException getSpecificERAlreadyPresentException(String message) {
return new IsParentOfAlreadyPresentException(message);
}
@Override
public JsonNode serializeAsJson() throws ResourceRegistryException {
return serializeAsJson(false, true);
}
public JsonNode serializeAsJson(boolean includeSource, boolean includeTarget) throws ResourceRegistryException {
JsonNode relation = serializeSelfOnly();
try {
Vertex source = element.getVertex(Direction.OUT);
ContextManagement sourceContextManagement = new ContextManagement(orientGraph);
sourceContextManagement.setElement(source);
if(includeSource) {
((ObjectNode)relation).replace(Relation.SOURCE_PROPERTY, sourceContextManagement.serializeSelfOnly());
}
Vertex target = element.getVertex(Direction.IN);
ContextManagement targetContextManagement = new ContextManagement(orientGraph);
targetContextManagement.setElement(target);
if(includeTarget) {
((ObjectNode)relation).replace(Relation.TARGET_PROPERTY, targetContextManagement.serializeSelfOnly());
}
} catch(ResourceRegistryException e) {
logger.error("Unable to correctly serialize {}. {}", element, Utility.SHOULD_NOT_OCCUR_ERROR_MESSAGE, e);
throw e;
} catch(Exception e) {
logger.error("Unable to correctly serialize {}. {}", element, Utility.SHOULD_NOT_OCCUR_ERROR_MESSAGE, e);
throw new ResourceRegistryException(e);
}
return relation;
}
@Override
protected SEM newSourceEntityManagement() throws ResourceRegistryException {
@SuppressWarnings("unchecked")
SEM sem = (SEM) new EntityTypeDefinitionManagement<SETD>(orientGraph);
return sem;
}
@Override
protected TEM newTargetEntityManagement() throws ResourceRegistryException {
@SuppressWarnings("unchecked")
TEM tem = (TEM) new EntityTypeDefinitionManagement<TETD>(orientGraph);
return tem;
}
@Override
protected boolean reallyAddToContext(SecurityContext targetSecurityContext)
throws ContextException, ResourceRegistryException {
throw new UnsupportedOperationException();
}
@Override
protected boolean reallyRemoveFromContext(SecurityContext targetSecurityContext)
throws ContextException, ResourceRegistryException {
throw new UnsupportedOperationException();
}
@Override
protected AvailableInAnotherContextException getSpecificERAvailableInAnotherContextException(String message) {
throw new UnsupportedOperationException();
}
@Override
public String reallyGetAll(boolean polymorphic) throws ResourceRegistryException {
throw new UnsupportedOperationException();
}
}

10
src/main/java/org/gcube/informationsystem/resourceregistry/query/QueryImpl.java
View File

@ -3,11 +3,11 @@ package org.gcube.informationsystem.resourceregistry.query;
import org.gcube.informationsystem.resourceregistry.api.exceptions.ResourceRegistryException;
import org.gcube.informationsystem.resourceregistry.api.exceptions.query.InvalidQueryException;
import org.gcube.informationsystem.resourceregistry.api.rest.AccessPath;
import org.gcube.informationsystem.resourceregistry.context.ContextUtility;
import org.gcube.informationsystem.resourceregistry.context.security.SecurityContext;
import org.gcube.informationsystem.resourceregistry.context.security.SecurityContext.PermissionMode;
import org.gcube.informationsystem.resourceregistry.er.ERManagement;
import org.gcube.informationsystem.resourceregistry.er.ERManagementUtility;
import org.gcube.informationsystem.resourceregistry.instances.base.ERManagement;
import org.gcube.informationsystem.resourceregistry.instances.base.ERManagementUtility;
import org.gcube.informationsystem.resourceregistry.instances.context.ContextUtility;
import org.gcube.informationsystem.resourceregistry.security.SecurityContext;
import org.gcube.informationsystem.resourceregistry.security.SecurityContext.PermissionMode;
import org.gcube.informationsystem.resourceregistry.utils.Utility;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;

14
src/main/java/org/gcube/informationsystem/resourceregistry/rest/Access.java
View File

@ -33,15 +33,15 @@ import org.gcube.informationsystem.resourceregistry.api.exceptions.context.Conte
import org.gcube.informationsystem.resourceregistry.api.exceptions.query.InvalidQueryException;
import org.gcube.informationsystem.resourceregistry.api.exceptions.schema.SchemaNotFoundException;
import org.gcube.informationsystem.resourceregistry.api.rest.AccessPath;
import org.gcube.informationsystem.resourceregistry.context.ContextManagement;
import org.gcube.informationsystem.resourceregistry.context.ContextUtility;
import org.gcube.informationsystem.resourceregistry.er.ERManagement;
import org.gcube.informationsystem.resourceregistry.er.ERManagementUtility;
import org.gcube.informationsystem.resourceregistry.er.entity.ResourceManagement;
import org.gcube.informationsystem.resourceregistry.instances.base.ERManagement;
import org.gcube.informationsystem.resourceregistry.instances.base.ERManagementUtility;
import org.gcube.informationsystem.resourceregistry.instances.context.ContextUtility;
import org.gcube.informationsystem.resourceregistry.instances.context.entities.ContextManagement;
import org.gcube.informationsystem.resourceregistry.instances.model.entity.ResourceManagement;
import org.gcube.informationsystem.resourceregistry.instances.type.SchemaManagement;
import org.gcube.informationsystem.resourceregistry.instances.type.SchemaManagementImpl;
import org.gcube.informationsystem.resourceregistry.query.Query;
import org.gcube.informationsystem.resourceregistry.query.QueryImpl;
import org.gcube.informationsystem.resourceregistry.schema.SchemaManagement;
import org.gcube.informationsystem.resourceregistry.schema.SchemaManagementImpl;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;

4
src/main/java/org/gcube/informationsystem/resourceregistry/rest/ContextManager.java
View File

@ -22,8 +22,8 @@ import org.gcube.informationsystem.resourceregistry.api.exceptions.ResourceRegis
import org.gcube.informationsystem.resourceregistry.api.exceptions.context.ContextNotFoundException;
import org.gcube.informationsystem.resourceregistry.api.rest.AccessPath;
import org.gcube.informationsystem.resourceregistry.api.rest.ContextPath;
import org.gcube.informationsystem.resourceregistry.context.ContextManagement;
import org.gcube.informationsystem.resourceregistry.context.ContextUtility;
import org.gcube.informationsystem.resourceregistry.instances.context.ContextUtility;
import org.gcube.informationsystem.resourceregistry.instances.context.entities.ContextManagement;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;

4
src/main/java/org/gcube/informationsystem/resourceregistry/rest/InstancesManager.java
View File

@ -27,8 +27,8 @@ import org.gcube.informationsystem.resourceregistry.api.exceptions.NotFoundExcep
import org.gcube.informationsystem.resourceregistry.api.exceptions.ResourceRegistryException;
import org.gcube.informationsystem.resourceregistry.api.rest.AccessPath;
import org.gcube.informationsystem.resourceregistry.api.rest.InstancePath;
import org.gcube.informationsystem.resourceregistry.er.ERManagement;
import org.gcube.informationsystem.resourceregistry.er.ERManagementUtility;
import org.gcube.informationsystem.resourceregistry.instances.base.ERManagement;
import org.gcube.informationsystem.resourceregistry.instances.base.ERManagementUtility;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;

7
src/main/java/org/gcube/informationsystem/resourceregistry/rest/SchemaManager.java
View File

@ -27,9 +27,9 @@ import org.gcube.informationsystem.resourceregistry.api.exceptions.schema.Schema
import org.gcube.informationsystem.resourceregistry.api.rest.AccessPath;
import org.gcube.informationsystem.resourceregistry.api.rest.InstancePath;
import org.gcube.informationsystem.resourceregistry.api.rest.TypePath;
import org.gcube.informationsystem.resourceregistry.er.ERManagementUtility;
import org.gcube.informationsystem.resourceregistry.schema.SchemaManagement;
import org.gcube.informationsystem.resourceregistry.schema.SchemaManagementImpl;
import org.gcube.informationsystem.resourceregistry.instances.base.ERManagementUtility;
import org.gcube.informationsystem.resourceregistry.instances.type.SchemaManagement;
import org.gcube.informationsystem.resourceregistry.instances.type.SchemaManagementImpl;
import org.gcube.informationsystem.types.TypeBinder;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;
@ -80,7 +80,6 @@ public class SchemaManager {
AccessType accessType = null;
String firstGotType = null;
try {
@SuppressWarnings("unchecked")
Set<String> superClasses = TypeBinder.deserializeTypeDefinition(json).getSuperClasses();
if(superClasses.size()==0) {
throw new ResourceRegistryException("No superclasses defined");

4
src/main/java/org/gcube/informationsystem/resourceregistry/rest/SharingManagement.java
View File

@ -18,8 +18,8 @@ import org.gcube.informationsystem.resourceregistry.api.exceptions.context.Conte
import org.gcube.informationsystem.resourceregistry.api.exceptions.entity.resource.ResourceNotFoundException;
import org.gcube.informationsystem.resourceregistry.api.rest.AccessPath;
import org.gcube.informationsystem.resourceregistry.api.rest.SharingPath;
import org.gcube.informationsystem.resourceregistry.er.ERManagement;
import org.gcube.informationsystem.resourceregistry.er.ERManagementUtility;
import org.gcube.informationsystem.resourceregistry.instances.base.ERManagement;
import org.gcube.informationsystem.resourceregistry.instances.base.ERManagementUtility;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;

2
src/main/java/org/gcube/informationsystem/resourceregistry/context/security/AdminSecurityContext.java → src/main/java/org/gcube/informationsystem/resourceregistry/security/AdminSecurityContext.java
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@ -1,4 +1,4 @@
package org.gcube.informationsystem.resourceregistry.context.security;
package org.gcube.informationsystem.resourceregistry.security;
import org.gcube.informationsystem.resourceregistry.api.exceptions.ResourceRegistryException;
import org.gcube.informationsystem.resourceregistry.dbinitialization.DatabaseEnvironment;

2
src/main/java/org/gcube/informationsystem/resourceregistry/context/security/ContextSecurityContext.java → src/main/java/org/gcube/informationsystem/resourceregistry/security/ContextSecurityContext.java
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@ -1,4 +1,4 @@
package org.gcube.informationsystem.resourceregistry.context.security;
package org.gcube.informationsystem.resourceregistry.security;
import org.gcube.informationsystem.resourceregistry.api.exceptions.ResourceRegistryException;
import org.gcube.informationsystem.resourceregistry.dbinitialization.DatabaseEnvironment;

2
src/main/java/org/gcube/informationsystem/resourceregistry/context/security/SchemaSecurityContext.java → src/main/java/org/gcube/informationsystem/resourceregistry/security/SchemaSecurityContext.java
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@ -1,4 +1,4 @@
package org.gcube.informationsystem.resourceregistry.context.security;
package org.gcube.informationsystem.resourceregistry.security;
import org.gcube.informationsystem.resourceregistry.api.exceptions.ResourceRegistryException;
import org.gcube.informationsystem.resourceregistry.dbinitialization.DatabaseEnvironment;

4
src/main/java/org/gcube/informationsystem/resourceregistry/context/security/SecurityContext.java → src/main/java/org/gcube/informationsystem/resourceregistry/security/SecurityContext.java
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@ -1,7 +1,7 @@
/**
*
*/
package org.gcube.informationsystem.resourceregistry.context.security;
package org.gcube.informationsystem.resourceregistry.security;
import java.util.ArrayList;
import java.util.HashMap;
@ -17,8 +17,8 @@ import java.util.concurrent.Future;
import org.gcube.informationsystem.context.reference.entities.Context;
import org.gcube.informationsystem.resourceregistry.api.exceptions.ResourceRegistryException;
import org.gcube.informationsystem.resourceregistry.context.ContextUtility;
import org.gcube.informationsystem.resourceregistry.dbinitialization.DatabaseEnvironment;
import org.gcube.informationsystem.resourceregistry.instances.context.ContextUtility;
import org.gcube.informationsystem.resourceregistry.utils.Utility;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;

6
src/main/java/org/gcube/informationsystem/resourceregistry/utils/Utility.java
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@ -9,9 +9,9 @@ import org.gcube.informationsystem.model.reference.entities.Entity;
import org.gcube.informationsystem.model.reference.relations.Relation;
import org.gcube.informationsystem.resourceregistry.api.exceptions.NotFoundException;
import org.gcube.informationsystem.resourceregistry.api.exceptions.ResourceRegistryException;
import org.gcube.informationsystem.resourceregistry.context.ContextUtility;
import org.gcube.informationsystem.resourceregistry.context.security.AdminSecurityContext;
import org.gcube.informationsystem.resourceregistry.context.security.SecurityContext.PermissionMode;
import org.gcube.informationsystem.resourceregistry.instances.context.ContextUtility;
import org.gcube.informationsystem.resourceregistry.security.AdminSecurityContext;
import org.gcube.informationsystem.resourceregistry.security.SecurityContext.PermissionMode;
import org.gcube.informationsystem.utils.ISMapper;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;

14
src/test/java/org/gcube/informationsystem/resourceregistry/context/ContextManagementTest.java
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@ -13,11 +13,13 @@ import org.gcube.informationsystem.resourceregistry.api.exceptions.ResourceRegis
import org.gcube.informationsystem.resourceregistry.api.exceptions.context.ContextAlreadyPresentException;
import org.gcube.informationsystem.resourceregistry.api.exceptions.context.ContextException;
import org.gcube.informationsystem.resourceregistry.api.exceptions.context.ContextNotFoundException;
import org.gcube.informationsystem.resourceregistry.context.security.ContextSecurityContext;
import org.gcube.informationsystem.resourceregistry.context.security.SecurityContext;
import org.gcube.informationsystem.resourceregistry.context.security.SecurityContext.PermissionMode;
import org.gcube.informationsystem.resourceregistry.context.security.SecurityContext.SecurityType;
import org.gcube.informationsystem.resourceregistry.er.entity.FacetManagementTest;
import org.gcube.informationsystem.resourceregistry.instances.context.ContextUtility;
import org.gcube.informationsystem.resourceregistry.instances.context.entities.ContextManagement;
import org.gcube.informationsystem.resourceregistry.security.ContextSecurityContext;
import org.gcube.informationsystem.resourceregistry.security.SecurityContext;
import org.gcube.informationsystem.resourceregistry.security.SecurityContext.PermissionMode;
import org.gcube.informationsystem.resourceregistry.security.SecurityContext.SecurityType;
import org.gcube.informationsystem.utils.ISMapper;
import org.junit.Assert;
import org.junit.Test;
@ -439,8 +441,8 @@ public class ContextManagementTest extends ContextTest {
List<Context> contexts = getAll();
for(Context context : contexts) {
logger.trace(ISMapper.marshal(context));
List<IsParentOf<Context,Context>> children = context.getChildren();
for(IsParentOf<Context,Context> child : children) {
List<IsParentOf> children = context.getChildren();
for(IsParentOf child : children) {
Assert.assertTrue(child.getSource() == context);
Context childContext = child.getTarget();
Assert.assertTrue(childContext.getParent().getSource() == context);

4
src/test/java/org/gcube/informationsystem/resourceregistry/dbinitialization/DatabaseEnvironmentTest.java
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@ -2,8 +2,8 @@ package org.gcube.informationsystem.resourceregistry.dbinitialization;
import org.gcube.informationsystem.base.reference.ISConstants;
import org.gcube.informationsystem.resourceregistry.api.exceptions.ResourceRegistryException;
import org.gcube.informationsystem.resourceregistry.context.ContextUtility;
import org.gcube.informationsystem.resourceregistry.context.security.SecurityContext.PermissionMode;
import org.gcube.informationsystem.resourceregistry.instances.context.ContextUtility;
import org.gcube.informationsystem.resourceregistry.security.SecurityContext.PermissionMode;
import org.junit.Assert;
import org.junit.Test;
import org.slf4j.Logger;

9
src/test/java/org/gcube/informationsystem/resourceregistry/er/ERManagementTest.java
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@ -34,10 +34,11 @@ import org.gcube.informationsystem.resourceregistry.ContextTest;
import org.gcube.informationsystem.resourceregistry.api.exceptions.ResourceRegistryException;
import org.gcube.informationsystem.resourceregistry.api.exceptions.entity.facet.FacetNotFoundException;
import org.gcube.informationsystem.resourceregistry.api.exceptions.query.InvalidQueryException;
import org.gcube.informationsystem.resourceregistry.er.entity.FacetManagement;
import org.gcube.informationsystem.resourceregistry.er.entity.ResourceManagement;
import org.gcube.informationsystem.resourceregistry.er.relation.ConsistsOfManagement;
import org.gcube.informationsystem.resourceregistry.er.relation.IsRelatedToManagement;
import org.gcube.informationsystem.resourceregistry.instances.base.ERManagementUtility;
import org.gcube.informationsystem.resourceregistry.instances.model.entity.FacetManagement;
import org.gcube.informationsystem.resourceregistry.instances.model.entity.ResourceManagement;
import org.gcube.informationsystem.resourceregistry.instances.model.relation.ConsistsOfManagement;
import org.gcube.informationsystem.resourceregistry.instances.model.relation.IsRelatedToManagement;
import org.gcube.informationsystem.utils.ISMapper;
import org.gcube.informationsystem.utils.Utility;
import org.gcube.resourcemanagement.model.impl.entities.facets.AccessPointFacetImpl;

2
src/test/java/org/gcube/informationsystem/resourceregistry/er/SmartgearResourcesTest.java
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@ -35,7 +35,7 @@ import org.gcube.informationsystem.model.reference.relations.ConsistsOf;
import org.gcube.informationsystem.model.reference.relations.IsIdentifiedBy;
import org.gcube.informationsystem.resourceregistry.ContextTest;
import org.gcube.informationsystem.resourceregistry.api.exceptions.ResourceRegistryException;
import org.gcube.informationsystem.resourceregistry.er.entity.ResourceManagement;
import org.gcube.informationsystem.resourceregistry.instances.model.entity.ResourceManagement;
import org.gcube.informationsystem.utils.ISMapper;
import org.gcube.resourcemanagement.model.impl.entities.facets.CPUFacetImpl;
import org.gcube.resourcemanagement.model.impl.entities.facets.ContainerStateFacetImpl;

3
src/test/java/org/gcube/informationsystem/resourceregistry/er/entity/FacetManagementTest.java
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@ -9,8 +9,9 @@ import org.gcube.informationsystem.resourceregistry.api.exceptions.entity.facet.
import org.gcube.informationsystem.resourceregistry.api.exceptions.entity.facet.FacetAvailableInAnotherContextException;
import org.gcube.informationsystem.resourceregistry.api.exceptions.entity.facet.FacetNotFoundException;
import org.gcube.informationsystem.resourceregistry.api.utils.Utility;
import org.gcube.informationsystem.resourceregistry.context.ContextUtility;
import org.gcube.informationsystem.resourceregistry.er.ERManagementTest;
import org.gcube.informationsystem.resourceregistry.instances.context.ContextUtility;
import org.gcube.informationsystem.resourceregistry.instances.model.entity.FacetManagement;
import org.gcube.informationsystem.resourceregistry.utils.HeaderUtility;
import org.gcube.informationsystem.utils.ISMapper;
import org.gcube.resourcemanagement.model.impl.entities.facets.SoftwareFacetImpl;

5
src/test/java/org/gcube/informationsystem/resourceregistry/er/entity/ResourceManagementTest.java
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@ -10,8 +10,9 @@ import org.gcube.informationsystem.model.reference.relations.ConsistsOf;
import org.gcube.informationsystem.model.reference.relations.IsIdentifiedBy;
import org.gcube.informationsystem.resourceregistry.ContextTest;
import org.gcube.informationsystem.resourceregistry.api.exceptions.ResourceRegistryException;
import org.gcube.informationsystem.resourceregistry.er.ERManagement;
import org.gcube.informationsystem.resourceregistry.er.ERManagementUtility;
import org.gcube.informationsystem.resourceregistry.instances.base.ERManagement;
import org.gcube.informationsystem.resourceregistry.instances.base.ERManagementUtility;
import org.gcube.informationsystem.resourceregistry.instances.model.entity.ResourceManagement;
import org.gcube.informationsystem.utils.ISMapper;
import org.gcube.resourcemanagement.model.impl.entities.resources.EServiceImpl;
import org.gcube.resourcemanagement.model.reference.entities.facets.SoftwareFacet;

8
src/test/java/org/gcube/informationsystem/resourceregistry/er/multicontext/BasicTest.java
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@ -22,11 +22,11 @@ import org.gcube.informationsystem.resourceregistry.api.exceptions.entity.facet.
import org.gcube.informationsystem.resourceregistry.api.exceptions.entity.resource.ResourceAvailableInAnotherContextException;
import org.gcube.informationsystem.resourceregistry.api.exceptions.entity.resource.ResourceNotFoundException;
import org.gcube.informationsystem.resourceregistry.api.exceptions.relation.RelationAvailableInAnotherContextException;
import org.gcube.informationsystem.resourceregistry.context.ContextUtility;
import org.gcube.informationsystem.resourceregistry.er.SmartgearResourcesTest;
import org.gcube.informationsystem.resourceregistry.er.entity.FacetManagement;
import org.gcube.informationsystem.resourceregistry.er.entity.ResourceManagement;
import org.gcube.informationsystem.resourceregistry.er.relation.IsRelatedToManagement;
import org.gcube.informationsystem.resourceregistry.instances.context.ContextUtility;
import org.gcube.informationsystem.resourceregistry.instances.model.entity.FacetManagement;
import org.gcube.informationsystem.resourceregistry.instances.model.entity.ResourceManagement;
import org.gcube.informationsystem.resourceregistry.instances.model.relation.IsRelatedToManagement;
import org.gcube.informationsystem.utils.ISMapper;
import org.gcube.resourcemanagement.model.impl.entities.facets.AccessPointFacetImpl;
import org.gcube.resourcemanagement.model.impl.entities.facets.CPUFacetImpl;

4
src/test/java/org/gcube/informationsystem/resourceregistry/er/multicontext/RuleTest.java
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@ -8,8 +8,8 @@ import org.gcube.informationsystem.model.reference.relations.IsIdentifiedBy;
import org.gcube.informationsystem.resourceregistry.ContextTest;
import org.gcube.informationsystem.resourceregistry.api.exceptions.entity.facet.FacetAlreadyPresentException;
import org.gcube.informationsystem.resourceregistry.api.exceptions.entity.resource.ResourceAlreadyPresentException;
import org.gcube.informationsystem.resourceregistry.er.entity.FacetManagement;
import org.gcube.informationsystem.resourceregistry.er.entity.ResourceManagement;
import org.gcube.informationsystem.resourceregistry.instances.model.entity.FacetManagement;
import org.gcube.informationsystem.resourceregistry.instances.model.entity.ResourceManagement;
import org.gcube.informationsystem.utils.ISMapper;
import org.gcube.resourcemanagement.model.impl.entities.facets.SoftwareFacetImpl;
import org.gcube.resourcemanagement.model.impl.entities.resources.EServiceImpl;

4
src/test/java/org/gcube/informationsystem/resourceregistry/schema/SchemaManagementImplTest.java
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@ -15,6 +15,8 @@ import org.gcube.informationsystem.model.reference.properties.Property;
import org.gcube.informationsystem.model.reference.relations.ConsistsOf;
import org.gcube.informationsystem.model.reference.relations.IsRelatedTo;
import org.gcube.informationsystem.model.reference.relations.Relation;
import org.gcube.informationsystem.resourceregistry.instances.type.SchemaManagement;
import org.gcube.informationsystem.resourceregistry.instances.type.SchemaManagementImpl;
import org.gcube.informationsystem.types.TypeBinder;
import org.gcube.informationsystem.types.reference.TypeDefinition;
import org.gcube.informationsystem.utils.ISMapper;
@ -58,7 +60,6 @@ public class SchemaManagementImplTest {
public void getFacetSchema() throws Exception {
String json = new SchemaManagementImpl().read(ContactFacet.NAME, false);
logger.info(json);
@SuppressWarnings("rawtypes")
List<TypeDefinition> typeDefinitions = TypeBinder.deserializeTypeDefinitions(json);
logger.info("{}", typeDefinitions);
@ -104,7 +105,6 @@ public class SchemaManagementImplTest {
String list = schemaManagement.read(BaseProperty.NAME, includeSubTypes);
logger.debug("{} list : {}", BaseProperty.NAME, list);
@SuppressWarnings("rawtypes")
List<TypeDefinition> typeDefinitions = ISMapper.unmarshalList(TypeDefinition.class, list);
logger.debug("{}", typeDefinitions);