gCubeSystem
/
performfish-analytics-portlet
16
0
Fork 0
Code Issues Pull Requests Releases Wiki Activity

ref 17249: Save produced charts as report 

https://support.d4science.org/issues/17249

Added PDF support for Correlation Analysis
This commit is contained in:
Giancarlo Panichi 2020-05-27 19:02:07 +02:00
parent 441c06203f
commit 7fa846fa24
9 changed files with 1040 additions and 761 deletions
Show Stats Download Patch File Download Diff File Expand all files Collapse all files

42
src/main/java/org/gcube/portlets/user/performfishanalytics/client/annualcontrollers/PerformFishAnnualAnalyticsController.java
View File

@ -30,13 +30,12 @@ import org.gcube.portlets.user.performfishanalytics.client.event.SelectedPopulat
import org.gcube.portlets.user.performfishanalytics.client.event.SubmitRequestEvent;
import org.gcube.portlets.user.performfishanalytics.client.event.SubmitRequestEventHandler;
import org.gcube.portlets.user.performfishanalytics.client.resources.PerformFishResources;
import org.gcube.portlets.user.performfishanalytics.client.viewannualbinder.AnalyticsAnnualPanelResult;
import org.gcube.portlets.user.performfishanalytics.client.viewannualbinder.CorrelationAnnualPanelResult;
import org.gcube.portlets.user.performfishanalytics.client.viewannualbinder.BoxPlotAnnualPanelResult;
import org.gcube.portlets.user.performfishanalytics.client.viewannualbinder.DeaAnnualPanelResult;
import org.gcube.portlets.user.performfishanalytics.client.viewannualbinder.ScatterAnnualPanelResult;
import org.gcube.portlets.user.performfishanalytics.client.viewannualbinder.SpeedometerAnnualPanelResult;
import org.gcube.portlets.user.performfishanalytics.client.viewannualbinder.SynopticTableAnnualPanelResult;
import org.gcube.portlets.user.performfishanalytics.client.viewbinder.AnalyticsPanelResult;
import org.gcube.portlets.user.performfishanalytics.client.viewbinder.SubmitRequestPanel;
import org.gcube.portlets.user.performfishanalytics.shared.KPI;
import org.gcube.portlets.user.performfishanalytics.shared.csv.CSVFile;
@ -152,7 +151,6 @@ public class PerformFishAnnualAnalyticsController {
@Override
public void onFieldFormChanged(PerformFishFieldFormChangedEvent performFishFieldFormChangedEvent) {
// viewAnnualController.setReloadPerformFishServiceData(true);
boolean isValidForm = viewAnnualController.validatePerformFishInputFields();
if (isValidForm) {
@ -325,7 +323,7 @@ public class PerformFishAnnualAnalyticsController {
* Call algorithm synoptic table farm.
*/
protected void callAlgorithmSynopticTableFarm() {
requestId++;
@SuppressWarnings("unused")
SynopticTableAnnualPanelResult synopticTablePanelResult = new SynopticTableAnnualPanelResult(requestId,
@ -568,12 +566,13 @@ public class PerformFishAnnualAnalyticsController {
final SubmitRequestPanel submitRequestPanel = new SubmitRequestPanel("", 1);
submitRequestPanel.showLoader(true,
"Submitting " + DataMinerAlgorithms.CORRELATION.getTitle() + " request to DM Service...");
String tabTitle = DataMinerAlgorithms.CORRELATION.getTitle();
final String tabTitle = DataMinerAlgorithms.CORRELATION.getTitle();
final String tabDescription = PerformFishResources.INSTANCE.farm_CORRELATION().getText();
final Tab tab = viewAnnualController.createTab(
tabTitle + " #" + (viewAnnualController.currentNumberOfTab() + 1),
PerformFishResources.INSTANCE.farm_CORRELATION().getText(), submitRequestPanel);
tabTitle + " #" + (viewAnnualController.currentNumberOfTab() + 1), tabDescription, submitRequestPanel);
requestId++;
PerformFishAnalyticsServiceAsync.Util.getInstance().callingDataMinerPerformFishAnnualCorrelationAnalysis(
dmInputParameters.getPerformFishResponse(), mapParameters, new AsyncCallback<DataMinerResponse>() {
@ -581,21 +580,15 @@ public class PerformFishAnnualAnalyticsController {
public void onSuccess(DataMinerResponse dmResponse) {
submitRequestPanel.showLoader(false, null);
checkTabSpinner(submitRequestPanel, tab);
AnalyticsAnnualPanelResult analyticsPanelResult = new AnalyticsAnnualPanelResult(eventBus);
// analyticsPanelResult.addSelectedAreas(performFishRequestParameters.get(PerformFishAnalyticsConstant.PERFORM_FISH_AREA_PARAM));
CorrelationAnnualPanelResult analyticsPanelResult = new CorrelationAnnualPanelResult(requestId,
eventBus, tabTitle, tabDescription);
analyticsPanelResult.addSelectedKPIs(inputKPI);
// TODO COMMENTED NOW
analyticsPanelResult.addListBatchIds(Arrays.asList(theFocusValue));
analyticsPanelResult.addParameters(PerformFishAnalyticsConstant.DATA_INPUTS, mapParameters,
viewAnnualController.getForm().getBatchType());
analyticsPanelResult.addResults(dmResponse);
submitRequestPanel.addWidget(analyticsPanelResult);
// viewController.geTabPanelView().addResult(resultPanel,
// "Analysis
// #"+(viewController.geTabPanelView().countTab()+1));
// modal.hide();
}
@Override
@ -604,18 +597,15 @@ public class PerformFishAnnualAnalyticsController {
submitRequestPanel.showLoader(false, null);
checkTabSpinner(submitRequestPanel, tab);
try {
AnalyticsPanelResult analyticsPanelResult = new AnalyticsPanelResult();
// analyticsPanelResult.addSelectedAreas(performFishRequestParameters.get(PerformFishAnalyticsConstant.PERFORM_FISH_AREA_PARAM));
analyticsPanelResult.addSelectedKPIs(viewAnnualController.getSelectedKPIs());
// TODO COMMENTED NOW
analyticsPanelResult.addListFocusIds(Arrays.asList(theFocusValue));
CorrelationAnnualPanelResult analyticsPanelResult = new CorrelationAnnualPanelResult(requestId,
eventBus, tabTitle, tabDescription);
analyticsPanelResult.addSelectedKPIs(inputKPI);
analyticsPanelResult.addListBatchIds(Arrays.asList(theFocusValue));
analyticsPanelResult.addParameters(PerformFishAnalyticsConstant.DATA_INPUTS, mapParameters,
viewAnnualController.getForm().getBatchType());
submitRequestPanel.addWidget(analyticsPanelResult);
} catch (Exception e) {
// TODO: handle exception
GWT.log(e.getLocalizedMessage(), e);
}
Alert error = new Alert(caught.getMessage());
@ -706,6 +696,4 @@ public class PerformFishAnnualAnalyticsController {
}
}
}

13
src/main/java/org/gcube/portlets/user/performfishanalytics/client/controllers/PerformFishAnalyticsController.java
View File

@ -33,7 +33,7 @@ import org.gcube.portlets.user.performfishanalytics.client.event.SubmitRequestEv
import org.gcube.portlets.user.performfishanalytics.client.event.SubmitRequestEventHandler;
import org.gcube.portlets.user.performfishanalytics.client.resources.PerformFishResources;
import org.gcube.portlets.user.performfishanalytics.client.view.LoaderIcon;
import org.gcube.portlets.user.performfishanalytics.client.viewbinder.AnalyticsPanelResult;
import org.gcube.portlets.user.performfishanalytics.client.viewbinder.CorrelationPanelResult;
import org.gcube.portlets.user.performfishanalytics.client.viewbinder.BoxPlotPanelResult;
import org.gcube.portlets.user.performfishanalytics.client.viewbinder.DeaPanelResult;
import org.gcube.portlets.user.performfishanalytics.client.viewbinder.ScatterPanelResult;
@ -491,12 +491,15 @@ public class PerformFishAnalyticsController {
submitRequestPanel.showLoader(true,
"Submitting " + DataMinerAlgorithms.CORRELATION.getTitle() + " request to DM Service...");
String tabTitle = DataMinerAlgorithms.CORRELATION.getTitle();
final String tabTitle = DataMinerAlgorithms.CORRELATION.getTitle();
final String tabDescr = PerformFishResources.INSTANCE.batch_CORRELATION().getText();
final Tab tab = viewController.createTab(tabTitle + " #" + (viewController.currentNumberOfTab() + 1),
PerformFishResources.INSTANCE.batch_CORRELATION().getText(), submitRequestPanel);
tabDescr, submitRequestPanel);
final List<KPI> selectedKPI = new ArrayList<KPI>(viewController.getSelectedKPIs());
final List<String> batchIDs = new ArrayList<String>(viewController.getListBatchesID());
requestId++;
PerformFishAnalyticsServiceAsync.Util.getInstance().callingDataMinerPerformFishCorrelationAnalysis(
performFishResponse, mapParameters, new AsyncCallback<DataMinerResponse>() {
@ -504,7 +507,7 @@ public class PerformFishAnalyticsController {
public void onSuccess(DataMinerResponse dmResponse) {
submitRequestPanel.showLoader(false, null);
checkTabSpinner(submitRequestPanel, tab);
AnalyticsPanelResult analyticsPanelResult = new AnalyticsPanelResult();
CorrelationPanelResult analyticsPanelResult = new CorrelationPanelResult(requestId,tabTitle, tabDescr);
analyticsPanelResult.addSelectedAreas(
performFishRequestParameters.get(PerformFishAnalyticsConstant.PERFORM_FISH_AREA_PARAM));
analyticsPanelResult.addSelectedKPIs(selectedKPI);
@ -525,7 +528,7 @@ public class PerformFishAnalyticsController {
submitRequestPanel.showLoader(false, null);
checkTabSpinner(submitRequestPanel, tab);
try {
AnalyticsPanelResult analyticsPanelResult = new AnalyticsPanelResult();
CorrelationPanelResult analyticsPanelResult = new CorrelationPanelResult(requestId, tabTitle, tabDescr);
analyticsPanelResult.addSelectedAreas(performFishRequestParameters
.get(PerformFishAnalyticsConstant.PERFORM_FISH_AREA_PARAM));
analyticsPanelResult.addSelectedKPIs(selectedKPI);

2
src/main/java/org/gcube/portlets/user/performfishanalytics/client/resources/Batch_CORRELATION
View File

@ -1,4 +1,4 @@
The correlation matrix is a table displaying the correlation between pairs of KPIs.
Correlation coefficients are calculated using the Person parametric correlation test and coloured according to the value in red (significant positive correlation), yellow (significant negative correlation), and in light blue (non-significant correlation).
Correlation coefficients are calculated using the Pearson parametric correlation test and coloured according to the value in red (significant positive correlation), yellow (significant negative correlation), and in light blue (non-significant correlation).
The Student t-test is used to determine the ranges of correlation for Pearson coefficients.
The analysis is performed on all batches data.

2
src/main/java/org/gcube/portlets/user/performfishanalytics/client/resources/Farm_CORRELATION
View File

@ -1,4 +1,4 @@
The correlation matrix is a table displaying the correlation between pairs of KPIs.
Correlation coefficients are calculated using the Person parametric correlation test and coloured according to the value in red (significant positive correlation), yellow (significant negative correlation), and in light blue (non-significant correlation).
Correlation coefficients are calculated using the Pearson parametric correlation test and coloured according to the value in red (significant positive correlation), yellow (significant negative correlation), and in light blue (non-significant correlation).
The Student t-test is used to determine the ranges of correlation for Pearson coefficients.
The analysis is performed on all farm data.

342
src/main/java/org/gcube/portlets/user/performfishanalytics/client/viewannualbinder/AnalyticsAnnualPanelResult.java → src/main/java/org/gcube/portlets/user/performfishanalytics/client/viewannualbinder/CorrelationAnnualPanelResult.java
View File

@ -51,13 +51,13 @@ import com.google.gwt.user.client.ui.Widget;
*
* @author Francesco Mangiacrapa francesco.mangiacrapa@isti.cnr.it Jan 29, 2019
*/
public class AnalyticsAnnualPanelResult extends Composite {
public class CorrelationAnnualPanelResult extends Composite {
/**
*
*/
private static AnalyticsPanelResultUiBinder uiBinder = GWT.create(AnalyticsPanelResultUiBinder.class);
private static CorrelationPanelResultUiBinder uiBinder = GWT.create(CorrelationPanelResultUiBinder.class);
/**
* The Interface AnalyticsPanelResultUiBinder.
@ -65,7 +65,7 @@ public class AnalyticsAnnualPanelResult extends Composite {
* @author Francesco Mangiacrapa at ISTI-CNR
* (francesco.mangiacrapa@isti.cnr.it) Jan 30, 2019
*/
interface AnalyticsPanelResultUiBinder extends UiBinder<Widget, AnalyticsAnnualPanelResult> {
interface CorrelationPanelResultUiBinder extends UiBinder<Widget, CorrelationAnnualPanelResult> {
}
@UiField
@ -118,15 +118,15 @@ public class AnalyticsAnnualPanelResult extends Composite {
private Map<String, CSVFile> csvGenerated = new HashMap<String, CSVFile>();
private AnalyticsAnnualPanelResult analyticsPanelResult;
private CorrelationAnnualPanelResult analyticsPanelResult;
private static int callNumber;
private int outputNumber;
private int requestId = 0;
private static Map<String, Integer> outputNumbers = new HashMap<String, Integer>();
private String analysisDescription;
public AnalyticsAnnualPanelResult(HandlerManager eventBus) {
public CorrelationAnnualPanelResult(int reqId, HandlerManager eventBus, final String tabTitle,
final String tabDescription) {
GWT.log("RequestID: " + reqId);
requestId = reqId;
initWidget(uiBinder.createAndBindUi(this));
// this.theEventBus = eventBus;
@ -138,26 +138,10 @@ public class AnalyticsAnnualPanelResult extends Composite {
@Override
public void onClick(ClickEvent event) {
saveFilePDF(analyticsPanelResult, "AnalysisResult.pdf");
saveFilePDF(analyticsPanelResult, tabTitle, tabTitle, tabDescription, requestId, outputNumber);
}
});
/*
* uib_save_pdf_2.setIcon(IconType.PRINT);
* uib_save_pdf_2.addClickHandler(new ClickHandler() {
*
* @Override public void onClick(ClickEvent event) {
* saveFilePDF(analyticsPanelResult, "AnalysisResult.pdf"); } });
*/
}
public String getAnalysisDescription() {
return analysisDescription;
}
public void setAnalysisDescription(String analysisDescription) {
this.analysisDescription = analysisDescription;
}
/**
@ -256,6 +240,7 @@ public class AnalyticsAnnualPanelResult extends Composite {
public void addParameters(String keyToGet, Map<String, List<String>> parameters, String toShowBatchTypeValue) {
final FlexTable flexTable = new FlexTable();
flexTable.getElement().setId("CorrelationParameterInputKPIs");
flexTable.setStyleName("colgrouptable");
try {
@ -289,8 +274,8 @@ public class AnalyticsAnnualPanelResult extends Composite {
KPINames += kpi.getName() + ", ";
}
KPINames = KPINames.substring(0, KPINames.length() - 2);
flexTable.setWidget(2, 0, new HTML("KPIs:"));
flexTable.setWidget(2, 1, new HTML(KPINames));
flexTable.setWidget(1, 0, new HTML("KPIs:"));
flexTable.setWidget(1, 1, new HTML(KPINames));
} catch (Exception e) {
// silent
@ -311,6 +296,13 @@ public class AnalyticsAnnualPanelResult extends Composite {
}
}
private String getOutputId() {
outputNumber++;
String outputId = "OutputId_" + requestId + "_" + outputNumber;
GWT.log("Generated OutputId: " + outputId);
return outputId;
}
/**
* Adds the results.
*
@ -321,7 +313,8 @@ public class AnalyticsAnnualPanelResult extends Composite {
this.dmResponse = dmResponse;
for (final OutputFile outputFile : dmResponse.getListOutput()) {
outputNumber = 0;
for (OutputFile outputFile : dmResponse.getListOutput()) {
if (outputFile.getDataType().equals(FileContentType.CSV)) {
PerformFishAnalyticsServiceAsync.Util.getInstance().getCSVFile(outputFile, true,
@ -373,7 +366,9 @@ public class AnalyticsAnnualPanelResult extends Composite {
HorizontalPanel hp = new HorizontalPanel();
final FlexTable flexTable = new FlexTable();
flexTable.setStyleName("fixedtable");
flexTable.getElement().setId(getOutputId());
flexTable.getElement().getStyle().setMarginBottom(10, Unit.PX);
flexTable.setWidget(0, 0, new Label(""));
@ -453,7 +448,7 @@ public class AnalyticsAnnualPanelResult extends Composite {
}
}
});
buttonHTML.getElement().getStyle().setBackgroundColor(theColor);
flexTable.setWidget(rowIndex, j, buttonHTML);
}
@ -462,6 +457,7 @@ public class AnalyticsAnnualPanelResult extends Composite {
hp.add(flexTable);
final FlexTable flexLegend = new FlexTable();
flexLegend.getElement().setId(getOutputId());
flexLegend.setStyleName("simpletable");
Map<String, String> map = CorrelationValueToColourUtil.getMap();
flexLegend.setWidget(0, 0, new Label("Legend"));
@ -470,6 +466,7 @@ public class AnalyticsAnnualPanelResult extends Composite {
for (String key : map.keySet()) {
final String rgbColor = map.get(key);
final HTML theLegendColor = new HTML("");
theLegendColor.getElement().getStyle().setBackgroundColor(rgbColor);
flexLegend.setWidget(i, 0, theLegendColor);
flexLegend.setWidget(i, 1, new HTML(key));
theLegendColor.addAttachHandler(new AttachEvent.Handler() {
@ -571,13 +568,17 @@ public class AnalyticsAnnualPanelResult extends Composite {
.fireEvent(new CallAlgorithmEvent(DataMinerAlgorithms.SCATTER, focusID, selectedKPI, null));
}
private static native void saveFilePDF(AnalyticsAnnualPanelResult chart, String filename)/*-{
private static native void saveFilePDF(CorrelationAnnualPanelResult chart, String filename, String tabTitle,
String tabDescr, int requestId, int outputNumber)/*-{
var that = this;
console.log('saveFilePDF()');
var tTitle = tabTitle;
var tDescr = tabDescr;
var pdoc = new jsPDF("p", "mm", "a4");
pdoc.setProperties({
title : 'PerformFish Analysis',
title : 'PerformFish ' + tTitle,
subject : ' Results',
author : 'PerformFish',
keywords : 'PerformFish',
@ -593,131 +594,196 @@ public class AnalyticsAnnualPanelResult extends Composite {
var pageCenter = pdfWidthInMM / 2;
pdoc.setFontSize(24);
var title = "PerformFish Analysis";
var title = "PerformFish " + tTitle;
var titleHeight = pdoc.getLineHeight(title) / pdoc.internal.scaleFactor
var xPos = lMargin;
var yPos = tMargin;
pdoc.text(title, pageCenter, yPos, 'center');
yPos += titleHeight;
var analysisDescription = chart.@org.gcube.portlets.user.performfishanalytics.client.viewannualbinder.AnalyticsAnnualPanelResult::analysisDescription;
pdoc.setFontSize(10);
var lineHeight = pdoc.getLineHeight(deaDescription)
/ pdoc.internal.scaleFactor
var splittedAnalysisDescription = pdoc.splitTextToSize(
analysisDescription, (pdfWidthInMM - lMargin - rMargin));
var lineHeight = pdoc.getLineHeight(tDescr) / pdoc.internal.scaleFactor
var splittedAnalysisDescription = pdoc.splitTextToSize(tDescr,
(pdfWidthInMM - lMargin - rMargin));
var lines = splittedAnalysisDescription.length // splitted text is a string array
var analysisDescriptionHeight = lines * lineHeight
pdoc.text(splittedAnalysisDescription, xPos, yPos, 'left');
yPos += analysisDescriptionHeight;
yPos += 2;
pdoc.text("Analysis:", xPos, yPos, 'left');
yPos += 6;
yPos += 4;
pdoc.setFontSize(10);
pdoc.setFontType("bold");
pdoc.text("Parameters:", xPos, yPos, 'left');
pdoc.setFontSize(10);
pdoc.setFontType("normal");
yPos += 4;
var callNumber = @org.gcube.portlets.user.performfishanalytics.client.viewannualbinder.AnalyticsAnnualPanelResult::callNumber;
console.log('CallNumber: ' + callNumber);
var correlationParametersInputKPIs = $doc
.getElementById('CorrelationParameterInputKPIs');
for (var n = 1; n <= callNumber; n++) {
var deaAnalysisResultParametersInputKPIs = $doc
.getElementById('DeaAnalysisResultParameterInputKPIs_' + n).innerHTML;
console.log('InputKPIs: ' + correlationParametersInputKPIs);
console.log('InputKPIs: ' + deaAnalysisResultParametersInputKPIs);
var deaAnalysisResultParametersOutputKPIs = $doc
.getElementById('DeaAnalysisResultParameterOutputKPIs_' + n).innerHTML;
console.log('OuputKPIs: ' + deaAnalysisResultParametersOutputKPIs);
pdoc.autoTable({
theme : 'plain',
startY : yPos,
pageBreak : 'auto',
columnStyles : {
0 : {
halign : 'left',
fillColor : [ 211, 225, 241 ]
}
},
head : null,
body : [
[ 'Selected Input KPIs',
deaAnalysisResultParametersInputKPIs ],
[ 'Selected Output KPIs',
deaAnalysisResultParametersOutputKPIs ] ]
});
yPos = pdoc.previousAutoTable.finalY + 6;
var deaAnalysisResults = $doc.getElementById('DeaAnalysisResults');
var deaAnalysisResult = $doc.getElementById('DeaAnalysisResult_'
+ n);
console.log("DeaAnalysisResult: " + n);
var outputNumber = @org.gcube.portlets.user.performfishanalytics.client.viewbinder.DeaPanelResult::getOutputNumber(Ljava/lang/String;)('DeaAnalysisResult_'+ n);
console.log('OutputNumber: ' + outputNumber);
for (var i = 1; i <= outputNumber; i++) {
var deaOutputId = 'DeaAnalysisResult_' + n + '_' + i;
console.log('DeaOutputId: ' + deaOutputId);
var deaOutputNumber = $doc.getElementById(deaOutputId);
console.log('DeaOutputNumber: ' + deaOutputNumber.innerHTML);
var resultType = deaOutputNumber.className;
console.log('DeaOutputNumber className: ' + resultType);
if (typeof resultType !== 'undefined' && resultType !== null
&& resultType !== '') {
if (resultType == 'csv') {
console.log('Result Type csv: ' + i);
// foo could get resolved and it's defined
var childrenTable = deaOutputNumber.children;
var secondDiv = childrenTable[0].rows[1].cells[0];
var secondTable = secondDiv.children[0].children[0];
console.log('CSV SecondTable: ' + secondTable);
pdoc.autoTable({
theme : 'grid',
startY : yPos,
pageBreak : 'auto',
bodyStyles : {
fontSize : 9
},
html : secondTable
});
yPos = pdoc.previousAutoTable.finalY + 6;
} else {
if (resultType == 'image') {
console.log('Result Type image: ' + i);
var childrenTable = deaOutputNumber.children;
var secondDiv = childrenTable[0].rows[1].cells[0];
var imageElement = secondDiv.getElementsByTagName(
'img').item(0);
console.log('Image element: ' + imageElement);
pdoc.addImage(imageElement, lMargin, yPos);
console.log('Image Height: ' + imageElement.height);
yPos += (imageElement.height * 0.26458333);
} else {
console.log('Result Type unknow: ' + i);
}
}
} else {
console.log('Result Type is undefined:' + i);
pdoc.autoTable({
theme : 'plain',
startY : yPos,
pageBreak : 'auto',
columnStyles : {
0 : {
halign : 'left',
fillColor : [ 211, 225, 241 ]
}
},
html : correlationParametersInputKPIs
});
//head : null,
// body : [
// [ 'Parameters',
// correlationParametersInputKPIs ]
// ]
yPos = pdoc.previousAutoTable.finalY + 6;
yPos += 2;
pdoc.setFontSize(10);
pdoc.setFontType("bold");
pdoc.text("CORRELATION Matrix:", xPos, yPos, 'left');
pdoc.setFontSize(10);
pdoc.setFontType("normal");
yPos += 4;
console.log('OutputNumber: ' + outputNumber);
for (var i = 1; i <= outputNumber; i++) {
var outputId = 'OutputId_' + requestId + '_' + i;
console.log('OutputId: ' + outputId);
var resultElement = $doc.getElementById(outputId);
console.log('Result Element: ' + resultElement);
var resultType = resultElement.className;
console.log('Result Element className: ' + resultType);
if (typeof resultType !== 'undefined' && resultType !== null
&& resultType !== '') {
if (resultType == 'fixedtable' || resultType == 'simpletable') {
console.log('Result Type csv: ' + i);
console.log('Result Content: ' + resultElement.innerHTML);
var checkColor = function(data) {
if (data.section === 'body') {
console.log(data);
if (typeof data.cell !== 'undefined'
&& data.cell !== null) {
if (typeof data.cell.raw !== 'undefined'
&& data.cell.raw !== null) {
console.log(data.cell.raw.innerHTML);
var positive = 'rgb(255, 68, 45)';
var negative = 'rgb(173, 216, 230)';
var nonsignificant = 'rgb(230, 223, 0)';
if (data.cell.raw.innerHTML
.indexOf(positive) >= 0) {
data.cell.styles.fillColor = [ 255, 68,
45 ];
} else {
if (data.cell.raw.innerHTML
.indexOf(negative) >= 0) {
data.cell.styles.fillColor = [ 173,
216, 230 ];
} else {
if (data.cell.raw.innerHTML
.indexOf(nonsignificant) >= 0) {
data.cell.styles.fillColor = [
230, 223, 0 ];
} else {
}
}
}
}
}
}
};
pdoc.autoTable({
theme : 'grid',
startY : yPos,
pageBreak : 'auto',
bodyStyles : {
fontSize : 9
},
didParseCell : checkColor,
html : resultElement
});
yPos = pdoc.previousAutoTable.finalY + 6;
} else {
if (resultType == 'image') {
console.log('Result Type image: ' + i);
var childrenTable = outputNumber.children;
var secondDiv = childrenTable[0].rows[1].cells[0];
var imageElement = secondDiv
.getElementsByTagName('img').item(0);
console.log('Image element: ' + imageElement);
pdoc.addImage(imageElement, lMargin, yPos);
console.log('Image Height: ' + imageElement.height);
yPos += (imageElement.height * 0.26458333);
} else {
console.log('Result Type unknow: ' + i);
}
}
} else {
console.log('Result Type is undefined:' + i);
}
if (i == outputNumber) {
} else {
if (pdfHeightInMM - yPos < pdfHeightInMM / 7) {
pdoc.addPage();
yPos = tMargin; // Restart position
}
}
}
var focusIDElement = $doc
.getElementById('field_list_focus_id_correlation');
console.log('FocusID Element: ' + focusIDElement);
var selectedIndex = focusIDElement.selectedIndex;
if (selectedIndex > -1) {
var value = focusIDElement[selectedIndex].innerText;
yPos += 2;
pdoc.setFontSize(10);
pdoc.setFontType("normal");
pdoc.text("Focus ID: "+value, xPos, yPos, 'left');
pdoc.setFontSize(10);
pdoc.setFontType("normal");
yPos += 4;
}
var numberOfPages = pdoc.internal.getNumberOfPages()
console.log('NumberOfPages: ' + numberOfPages);
for (var k = 1; k <= numberOfPages; k++) {
pdoc.setPage(k);
console.log('CurrentPage: ' + k);
var footner = 'Page ' + k + "/" + numberOfPages;
pdoc.text(footner, pageCenter, pdfHeightInMM - 7, 'center');
}
console.log('Done');
pdoc.save(filename);

0
src/main/java/org/gcube/portlets/user/performfishanalytics/client/viewannualbinder/AnalyticsAnnualPanelResult.ui.xml → src/main/java/org/gcube/portlets/user/performfishanalytics/client/viewannualbinder/CorrelationAnnualPanelResult.ui.xml
View File

588
src/main/java/org/gcube/portlets/user/performfishanalytics/client/viewbinder/AnalyticsPanelResult.java
View File

@ -1,588 +0,0 @@
/**
*
*/
package org.gcube.portlets.user.performfishanalytics.client.viewbinder;
import java.util.Arrays;
import java.util.HashMap;
import java.util.List;
import java.util.Map;
import org.gcube.portlets.user.performfishanalytics.client.DataMinerAlgorithms;
import org.gcube.portlets.user.performfishanalytics.client.PerformFishAnalyticsConstant;
import org.gcube.portlets.user.performfishanalytics.client.PerformFishAnalyticsServiceAsync;
import org.gcube.portlets.user.performfishanalytics.client.controllers.PerformFishAnalyticsController;
import org.gcube.portlets.user.performfishanalytics.client.event.CallAlgorithmEvent;
import org.gcube.portlets.user.performfishanalytics.client.view.util.CorrelationValueToColourUtil;
import org.gcube.portlets.user.performfishanalytics.shared.FileContentType;
import org.gcube.portlets.user.performfishanalytics.shared.KPI;
import org.gcube.portlets.user.performfishanalytics.shared.OutputFile;
import org.gcube.portlets.user.performfishanalytics.shared.csv.CSVFile;
import org.gcube.portlets.user.performfishanalytics.shared.csv.CSVRow;
import org.gcube.portlets.user.performfishanalytics.shared.dataminer.DataMinerResponse;
import com.github.gwtbootstrap.client.ui.Alert;
import com.github.gwtbootstrap.client.ui.ControlGroup;
import com.github.gwtbootstrap.client.ui.ListBox;
import com.github.gwtbootstrap.client.ui.constants.AlertType;
import com.github.gwtbootstrap.client.ui.constants.ControlGroupType;
import com.google.gwt.core.client.GWT;
import com.google.gwt.dom.client.Style.Unit;
import com.google.gwt.event.dom.client.ClickEvent;
import com.google.gwt.event.dom.client.ClickHandler;
import com.google.gwt.event.logical.shared.AttachEvent;
import com.google.gwt.uibinder.client.UiBinder;
import com.google.gwt.uibinder.client.UiField;
import com.google.gwt.user.client.rpc.AsyncCallback;
import com.google.gwt.user.client.ui.ComplexPanel;
import com.google.gwt.user.client.ui.Composite;
import com.google.gwt.user.client.ui.FlexTable;
import com.google.gwt.user.client.ui.HTML;
import com.google.gwt.user.client.ui.HTMLPanel;
import com.google.gwt.user.client.ui.HorizontalPanel;
import com.google.gwt.user.client.ui.Label;
import com.google.gwt.user.client.ui.VerticalPanel;
import com.google.gwt.user.client.ui.Widget;
/**
* The Class AnalyticsPanelResult.
*
* @author Francesco Mangiacrapa francesco.mangiacrapa@isti.cnr.it
* Jan 29, 2019
*/
public class AnalyticsPanelResult extends Composite {
/**
*
*/
private static AnalyticsPanelResultUiBinder uiBinder =
GWT.create(AnalyticsPanelResultUiBinder.class);
/**
* The Interface AnalyticsPanelResultUiBinder.
*
* @author Francesco Mangiacrapa at ISTI-CNR (francesco.mangiacrapa@isti.cnr.it)
* Jan 30, 2019
*/
interface AnalyticsPanelResultUiBinder
extends UiBinder<Widget, AnalyticsPanelResult> {
}
@UiField
HTMLPanel field_html_panel;
@UiField
VerticalPanel field_parameters_container;
@UiField
VerticalPanel uib_vp_correlation_results_container;
@UiField
VerticalPanel field_unary_algorithm_container;
@UiField
VerticalPanel field_binary_algorithm;
@UiField
VerticalPanel field_binary_algorithm_container;
@UiField
VerticalPanel field_unary_algorithm;
@UiField
Label uib_label_focus_id;
@UiField
ControlGroup cg_focus_id_correlation;
@UiField
ListBox field_list_focus_id_correlation;
private Map<String,String> dataInputParameters;
private DataMinerResponse dmResponse;
private Map<String,List<KPI>> kpiMapPointers = new HashMap<String, List<KPI>>();
private List<KPI> selectedKPIs;
private List<String> selectedAreas;
private Map<String, CSVFile> csvGenerated = new HashMap<String, CSVFile>();
/**
* Because this class has a default constructor, it can
* be used as a binder template. In other words, it can be used in other
* *.ui.xml files as follows:
* <ui:UiBinder xmlns:ui="urn:ui:com.google.gwt.uibinder"
* xmlns:g="urn:import:**user's package**">
* <g:**UserClassName**>Hello!</g:**UserClassName>
* </ui:UiBinder>
* Note that depending on the widget that is used, it may be necessary to
* implement HasHTML instead of HasText.
*/
public AnalyticsPanelResult() {
initWidget(uiBinder.createAndBindUi(this));
}
/**
* Adds the selected areas.
*
* @param listAreas the list areas
*/
public void addSelectedAreas(List<String> listAreas) {
this.selectedAreas = listAreas;
}
/**
* Gets the data miner response.
*
* @return the data miner response
*/
public DataMinerResponse getDataMinerResponse(){
return dmResponse;
}
/**
* Gets the data input parameters.
*
* @return the data input parameters
*/
public Map<String, String> getDataInputParameters() {
return dataInputParameters;
}
/**
* Show alert.
*
* @param error the error
* @param type the type
* @param closable the closable
* @param panel the panel
*/
private void showAlert(String error, AlertType type, boolean closable, ComplexPanel panel){
Alert alert = new Alert(error);
alert.setType(type);
alert.setClose(closable);
alert.getElement().getStyle().setMargin(10, Unit.PX);
panel.add(alert);
}
/**
* Adds the selected kp is.
*
* @param selectedKPIs the selected kp is
*/
public void addSelectedKPIs(List<KPI> selectedKPIs) {
this.selectedKPIs = selectedKPIs;
}
/**
* Gets the KPI for name.
*
* @param name the name
* @return the KPI for name
*/
public KPI getKPIForName(String name){
GWT.log("Searching KPI name: "+name);
KPI foundKPI = null;
String purgedName = name.trim();
for (KPI kpi : selectedKPIs) {
String purgedKPIName = kpi.getName().trim();
if(purgedKPIName.compareToIgnoreCase(purgedName)==0) {
foundKPI = kpi;
break;
}
}
GWT.log("FOUND KPI: "+foundKPI);
return foundKPI;
}
/**
* Adds the parameters.
*
* @param keyToGet the key to get
* @param parameters the parameters
* @param toShowBatchTypeValue label to show batch type value
*/
public void addParameters(String keyToGet, Map<String, List<String>> parameters, String toShowBatchTypeValue) {
final FlexTable flexTable = new FlexTable();
flexTable.setStyleName("colgrouptable");
try{
List<String> dataInputs = parameters.get(keyToGet);
if(dataInputs==null || dataInputs.isEmpty())
return;
dataInputParameters = new HashMap<String, String>();
String theDataInputs = dataInputs.get(0);
String[] splittedParams = theDataInputs.split(";");
for (String splitParam : splittedParams) {
try{
String[] keyvalue = splitParam.split("=");
dataInputParameters.put(keyvalue[0], keyvalue[1]);
}catch(Exception e){
}
}
flexTable.setWidget(0, 0, new HTML("Batch Type:"));
flexTable.setWidget(0, 1, new HTML(toShowBatchTypeValue));
flexTable.setWidget(1, 0, new HTML("Level:"));
flexTable.setWidget(1, 1, new HTML(dataInputParameters.get(PerformFishAnalyticsConstant.DM_SCALEP_PARAM)));
String KPINames = "";
for (KPI kpi: selectedKPIs) {
KPINames+=kpi.getName() +", ";
}
KPINames = KPINames.substring(0, KPINames.length()-2);
flexTable.setWidget(2, 0, new HTML("KPIs:"));
flexTable.setWidget(2, 1, new HTML(KPINames));
}catch(Exception e){
//silent
}
field_parameters_container.add(flexTable);
}
/**
* Adds the list focus ids.
*
* @param listFocusIDs the list focus I ds
*/
public void addListFocusIds(List<String> listFocusIDs){
for (String batchID : listFocusIDs) {
field_list_focus_id_correlation.addItem(batchID, batchID);
}
}
/**
* Adds the results.
*
* @param dmResponse the dm response
*/
public void addResults(DataMinerResponse dmResponse) {
this.dmResponse = dmResponse;
for (final OutputFile outputFile : dmResponse.getListOutput()) {
if(outputFile.getDataType().equals(FileContentType.CSV)){
PerformFishAnalyticsServiceAsync.Util.getInstance().getCSVFile(outputFile, true, new AsyncCallback<CSVFile>() {
@Override
public void onFailure(Throwable caught) {
showAlert(caught.getMessage(), AlertType.ERROR, true, uib_vp_correlation_results_container);
}
@Override
public void onSuccess(CSVFile result) {
csvGenerated.put(result.getFileName(), result);
fillCorrelationMatrix();
}
});
}
}
}
private void fillCorrelationMatrix() {
if(csvGenerated.size()<2)
return;
String corrIndexFilename = null;
String corrFilename = null;
for (String fileName : csvGenerated.keySet()) {
if(fileName.contains("index")) {
corrIndexFilename = fileName;
}else {
corrFilename = fileName;
}
}
GWT.log("Correlation Matrix Index File: "+corrIndexFilename);
GWT.log("Correlation Matrix File: "+corrFilename);
CSVFile corrIndexCsvFile = csvGenerated.get(corrIndexFilename);
CSVFile corrCsvFile = csvGenerated.get(corrFilename);
GWT.log("Correlation Matrix Index CSV: "+corrIndexCsvFile);
GWT.log("Correlation Matrix CSV: "+corrCsvFile);
HorizontalPanel hp = new HorizontalPanel();
final FlexTable flexTable = new FlexTable();
flexTable.setStyleName("fixedtable");
flexTable.getElement().getStyle().setMarginBottom(10, Unit.PX);
flexTable.setWidget(0, 0,new Label(""));
CSVRow headerRow = corrIndexCsvFile.getHeaderRow();
//HEADER
for (int i=1; i<headerRow.getListValues().size(); i++) {
final String headerValue = headerRow.getListValues().get(i);
// final Button button = new Button(headerValue);
// button.setType(ButtonType.LINK);
HTML label = new HTML(headerValue);
label.getElement().getStyle().setFontSize(16, Unit.PX);
final int columnIndex = i;
KPI kpi = getKPIForName(headerValue);
fillKPIReferenceForIndex(0, columnIndex, Arrays.asList(kpi));
// button.addClickHandler(new ClickHandler() {
//
// @Override
// public void onClick(ClickEvent event) {
// //calling unary operator
// callBoxPlotAndSpeedoMeter(0,columnIndex,button);
//
// }
// });
flexTable.setWidget(0, i,label);
}
//DATA
for (int i=0; i<corrIndexCsvFile.getValueRows().size(); i++) {
CSVRow row = corrIndexCsvFile.getValueRows().get(i);
CSVRow rowMatrixColor = corrCsvFile.getValueRows().get(i);
final int rowIndex = i+1; //adding +1 for header row
for (int j=0; j<row.getListValues().size(); j++) {
final String rowValue = row.getListValues().get(j);
final String rowMatrixColorValue = rowMatrixColor.getListValues().get(j);
final String theColor = CorrelationValueToColourUtil.getRGBColor(rowMatrixColorValue);
final int columnIndex = j;
//final Button button = new Button(rowValue);
final HTML buttonHTML = new HTML(rowValue);
buttonHTML.addStyleName("my-active-html");
// button.setType(ButtonType.LINK);
// button.setSize(ButtonSize.LARGE);
//only the first column
if(j==0){
HTML label = new HTML(rowValue);
label.getElement().getStyle().setFontSize(16, Unit.PX);
flexTable.setWidget(rowIndex, j,label);
//rowValue is a KPI name
KPI kpi = getKPIForName(rowValue);
fillKPIReferenceForIndex(rowIndex, columnIndex, Arrays.asList(kpi));
continue;
//rowValue is a KPI name
// KPI kpi = getKPIForName(rowValue);
// fillKPIReferenceForIndex(rowIndex, columnIndex, Arrays.asList(kpi));
// button.addClickHandler(new ClickHandler() {
//
// @Override
// public void onClick(ClickEvent event) {
// //calling unary operator
// callBoxPlotAndSpeedoMeter(rowIndex, columnIndex, button);
//
// }
// });
}
//diagonal
else if(rowIndex==j){
//rowValue should be 1
//HTML dg = new HTML("1");
HTML dg = new HTML(rowValue);
dg.getElement().getStyle().setFontSize(18, Unit.PX);
flexTable.setWidget(rowIndex, j,dg);
continue;
//j > 0
}else{
KPI columnKPI = getKPIForName(headerRow.getListValues().get(columnIndex));
//Here the first index is the KPI name
KPI rowKPI = getKPIForName(row.getListValues().get(0));
fillKPIReferenceForIndex(rowIndex, columnIndex, Arrays.asList(columnKPI, rowKPI));
//button.setText(" ");
//button.setIcon(IconType.COMPASS);
//button.setSize(ButtonSize.LARGE);
buttonHTML.addClickHandler(new ClickHandler() {
@Override
public void onClick(ClickEvent event) {
//callScatterAndDeaChart(rowIndex, columnIndex, button);
callScatter(rowIndex, columnIndex, buttonHTML);
}
});
}
//button.setType(ButtonType.LINK);
//APPLYING STYLE ONLY ON INTERNAL VALUES OF CSV
if(j>0)
buttonHTML.getElement().getStyle().setColor("#000");
buttonHTML.addAttachHandler(new AttachEvent.Handler() {
@Override
public void onAttachOrDetach(AttachEvent event) {
if(theColor.startsWith("#")){
GWT.log("Setting backgrounf color: "+theColor);
buttonHTML.getElement().getParentElement().getStyle().setBackgroundColor(theColor);
}
}
});
flexTable.setWidget(rowIndex, j,buttonHTML);
}
}
hp.add(flexTable);
final FlexTable flexLegend = new FlexTable();
flexLegend.setStyleName("simpletable");
//flexLegend.getElement().getStyle().setBorderWidth(0, Unit.PX);
Map<String, String> map = CorrelationValueToColourUtil.getMap();
flexLegend.setWidget(0, 0, new Label("Legend"));
flexLegend.setWidget(0, 1, new HTML(""));
int i = 1;
for (String key : map.keySet()) {
final String rgbColor = map.get(key);
final HTML theLegendColor = new HTML("");
flexLegend.setWidget(i, 0, theLegendColor);
flexLegend.setWidget(i, 1, new HTML(key));
theLegendColor.addAttachHandler(new AttachEvent.Handler() {
@Override
public void onAttachOrDetach(AttachEvent event) {
theLegendColor.getElement().getParentElement().getStyle().setBackgroundColor(rgbColor);
}
});
i++;
}
flexLegend.getElement().getStyle().setMarginLeft(15, Unit.PX);
hp.add(flexLegend);
uib_vp_correlation_results_container.insert(hp,0);
}
/**
* Fill kpi reference for index.
*
* @param rowIndex the row index
* @param columnIndex the column index
* @param listKPI the list kpi
*/
private void fillKPIReferenceForIndex(int rowIndex, int columnIndex, List<KPI> listKPI){
String key = generateKey(rowIndex, columnIndex);
kpiMapPointers.put(key, listKPI);
}
/**
* Gets the KPI for indexes.
*
* @param rowIndex the row index
* @param columnIndex the column index
* @return the KPI for indexes
*/
public List<KPI> getKPIForIndexes(int rowIndex, int columnIndex){
String key = generateKey(rowIndex, columnIndex);
return kpiMapPointers.get(key);
}
/**
* Generate key.
*
* @param rowIndex the row index
* @param columnIndex the column index
* @return the string
*/
private String generateKey(int rowIndex, int columnIndex) {
return rowIndex+"-"+columnIndex;
}
/**
* Check valid focus id.
*
* @return the FocusID if it is valid, null otherwise.
*/
public String checkValidFocusID(){
cg_focus_id_correlation.setType(ControlGroupType.NONE);
//CHECK THE FOCUS ID VALUE
String focusID = field_list_focus_id_correlation.getSelectedItemText();
if(focusID==null || focusID.isEmpty()){
String msgError = "Could not execute a valid Analysis.";
if(selectedAreas==null || selectedAreas.isEmpty()){
msgError+=" Please select another parameters computation";
}else{
msgError+=" Select at least the Area of your FARM";
}
showAlert(msgError, AlertType.ERROR, true, uib_vp_correlation_results_container);
cg_focus_id_correlation.setType(ControlGroupType.ERROR);
return null;
}
return focusID;
}
/**
* Call scatter.
*
* @param rowIndex the row index
* @param columnIndex the column index
* @param button the button
*/
private void callScatter(int rowIndex, int columnIndex, HTML button){
String focusID = checkValidFocusID();
if(focusID==null)
return;
GWT.log("Called ScatterChart at rowIndex: "+rowIndex +", columnIndex: "+columnIndex);
List<KPI> selectedKPI = getKPIForIndexes(rowIndex, columnIndex);
GWT.log("Selected KPI: "+selectedKPI);
PerformFishAnalyticsController.eventBus.fireEvent(new CallAlgorithmEvent(DataMinerAlgorithms.SCATTER, focusID, selectedKPI, null));
}
}

807
src/main/java/org/gcube/portlets/user/performfishanalytics/client/viewbinder/CorrelationPanelResult.java Normal file
View File

@ -0,0 +1,807 @@
/**
*
*/
package org.gcube.portlets.user.performfishanalytics.client.viewbinder;
import java.util.Arrays;
import java.util.HashMap;
import java.util.List;
import java.util.Map;
import org.gcube.portlets.user.performfishanalytics.client.DataMinerAlgorithms;
import org.gcube.portlets.user.performfishanalytics.client.PerformFishAnalyticsConstant;
import org.gcube.portlets.user.performfishanalytics.client.PerformFishAnalyticsServiceAsync;
import org.gcube.portlets.user.performfishanalytics.client.controllers.PerformFishAnalyticsController;
import org.gcube.portlets.user.performfishanalytics.client.event.CallAlgorithmEvent;
import org.gcube.portlets.user.performfishanalytics.client.view.util.CorrelationValueToColourUtil;
import org.gcube.portlets.user.performfishanalytics.shared.FileContentType;
import org.gcube.portlets.user.performfishanalytics.shared.KPI;
import org.gcube.portlets.user.performfishanalytics.shared.OutputFile;
import org.gcube.portlets.user.performfishanalytics.shared.csv.CSVFile;
import org.gcube.portlets.user.performfishanalytics.shared.csv.CSVRow;
import org.gcube.portlets.user.performfishanalytics.shared.dataminer.DataMinerResponse;
import com.github.gwtbootstrap.client.ui.Alert;
import com.github.gwtbootstrap.client.ui.Button;
import com.github.gwtbootstrap.client.ui.ControlGroup;
import com.github.gwtbootstrap.client.ui.ListBox;
import com.github.gwtbootstrap.client.ui.constants.AlertType;
import com.github.gwtbootstrap.client.ui.constants.ControlGroupType;
import com.github.gwtbootstrap.client.ui.constants.IconType;
import com.google.gwt.core.client.GWT;
import com.google.gwt.dom.client.Style.Unit;
import com.google.gwt.event.dom.client.ClickEvent;
import com.google.gwt.event.dom.client.ClickHandler;
import com.google.gwt.event.logical.shared.AttachEvent;
import com.google.gwt.uibinder.client.UiBinder;
import com.google.gwt.uibinder.client.UiField;
import com.google.gwt.user.client.rpc.AsyncCallback;
import com.google.gwt.user.client.ui.ComplexPanel;
import com.google.gwt.user.client.ui.Composite;
import com.google.gwt.user.client.ui.FlexTable;
import com.google.gwt.user.client.ui.HTML;
import com.google.gwt.user.client.ui.HTMLPanel;
import com.google.gwt.user.client.ui.HorizontalPanel;
import com.google.gwt.user.client.ui.Label;
import com.google.gwt.user.client.ui.VerticalPanel;
import com.google.gwt.user.client.ui.Widget;
/**
* The Class AnalyticsPanelResult.
*
* @author Francesco Mangiacrapa francesco.mangiacrapa@isti.cnr.it Jan 29, 2019
*/
public class CorrelationPanelResult extends Composite {
/**
*
*/
private static CorrelationPanelResultUiBinder uiBinder = GWT.create(CorrelationPanelResultUiBinder.class);
/**
* The Interface AnalyticsPanelResultUiBinder.
*
* @author Francesco Mangiacrapa at ISTI-CNR
* (francesco.mangiacrapa@isti.cnr.it) Jan 30, 2019
*/
interface CorrelationPanelResultUiBinder extends UiBinder<Widget, CorrelationPanelResult> {
}
@UiField
HTMLPanel field_html_panel;
@UiField
VerticalPanel field_parameters_container;
@UiField
VerticalPanel uib_vp_correlation_results_container;
@UiField
VerticalPanel field_unary_algorithm_container;
@UiField
VerticalPanel field_binary_algorithm;
@UiField
VerticalPanel field_binary_algorithm_container;
@UiField
VerticalPanel field_unary_algorithm;
@UiField
Label uib_label_focus_id;
@UiField
ControlGroup cg_focus_id_correlation;
@UiField
ListBox field_list_focus_id_correlation;
@UiField
Button uib_save_pdf_1;
private Map<String, String> dataInputParameters;
private DataMinerResponse dmResponse;
private Map<String, List<KPI>> kpiMapPointers = new HashMap<String, List<KPI>>();
private List<KPI> selectedKPIs;
private List<String> selectedAreas;
private Map<String, CSVFile> csvGenerated = new HashMap<String, CSVFile>();
private CorrelationPanelResult analyticsPanelResult;
private int outputNumber;
private int requestId = 0;
/**
*
* @param reqId
* Request Identifier
* @param tabTitle
* Title
* @param tabDescription
* Description
*/
public CorrelationPanelResult(int reqId, final String tabTitle, final String tabDescription) {
GWT.log("RequestID: " + reqId);
requestId = reqId;
initWidget(uiBinder.createAndBindUi(this));
analyticsPanelResult = this;
uib_save_pdf_1.setIcon(IconType.PRINT);
uib_save_pdf_1.addClickHandler(new ClickHandler() {
@Override
public void onClick(ClickEvent event) {
saveFilePDF(analyticsPanelResult, tabTitle, tabTitle, tabDescription, requestId, outputNumber);
}
});
}
/**
* Adds the selected areas.
*
* @param listAreas
* the list areas
*/
public void addSelectedAreas(List<String> listAreas) {
this.selectedAreas = listAreas;
}
/**
* Gets the data miner response.
*
* @return the data miner response
*/
public DataMinerResponse getDataMinerResponse() {
return dmResponse;
}
/**
* Gets the data input parameters.
*
* @return the data input parameters
*/
public Map<String, String> getDataInputParameters() {
return dataInputParameters;
}
/**
* Show alert.
*
* @param error
* the error
* @param type
* the type
* @param closable
* the closable
* @param panel
* the panel
*/
private void showAlert(String error, AlertType type, boolean closable, ComplexPanel panel) {
Alert alert = new Alert(error);
alert.setType(type);
alert.setClose(closable);
alert.getElement().getStyle().setMargin(10, Unit.PX);
panel.add(alert);
}
/**
* Adds the selected kp is.
*
* @param selectedKPIs
* the selected kp is
*/
public void addSelectedKPIs(List<KPI> selectedKPIs) {
this.selectedKPIs = selectedKPIs;
}
/**
* Gets the KPI for name.
*
* @param name
* the name
* @return the KPI for name
*/
public KPI getKPIForName(String name) {
GWT.log("Searching KPI name: " + name);
KPI foundKPI = null;
String purgedName = name.trim();
for (KPI kpi : selectedKPIs) {
String purgedKPIName = kpi.getName().trim();
if (purgedKPIName.compareToIgnoreCase(purgedName) == 0) {
foundKPI = kpi;
break;
}
}
GWT.log("FOUND KPI: " + foundKPI);
return foundKPI;
}
/**
* Adds the parameters.
*
* @param keyToGet
* the key to get
* @param parameters
* the parameters
* @param toShowBatchTypeValue
* label to show batch type value
*/
public void addParameters(String keyToGet, Map<String, List<String>> parameters, String toShowBatchTypeValue) {
final FlexTable flexTable = new FlexTable();
flexTable.getElement().setId("CorrelationParameterInputKPIs");
flexTable.setStyleName("colgrouptable");
try {
List<String> dataInputs = parameters.get(keyToGet);
if (dataInputs == null || dataInputs.isEmpty())
return;
dataInputParameters = new HashMap<String, String>();
String theDataInputs = dataInputs.get(0);
String[] splittedParams = theDataInputs.split(";");
for (String splitParam : splittedParams) {
try {
String[] keyvalue = splitParam.split("=");
dataInputParameters.put(keyvalue[0], keyvalue[1]);
} catch (Exception e) {
}
}
flexTable.setWidget(0, 0, new HTML("Batch Type:"));
flexTable.setWidget(0, 1, new HTML(toShowBatchTypeValue));
flexTable.setWidget(1, 0, new HTML("Level:"));
flexTable.setWidget(1, 1, new HTML(dataInputParameters.get(PerformFishAnalyticsConstant.DM_SCALEP_PARAM)));
String KPINames = "";
for (KPI kpi : selectedKPIs) {
KPINames += kpi.getName() + ", ";
}
KPINames = KPINames.substring(0, KPINames.length() - 2);
flexTable.setWidget(2, 0, new HTML("KPIs:"));
flexTable.setWidget(2, 1, new HTML(KPINames));
} catch (Exception e) {
// silent
}
field_parameters_container.add(flexTable);
}
/**
* Adds the list focus ids.
*
* @param listFocusIDs
* the list focus I ds
*/
public void addListFocusIds(List<String> listFocusIDs) {
for (String batchID : listFocusIDs) {
field_list_focus_id_correlation.addItem(batchID, batchID);
}
}
private String getOutputId() {
outputNumber++;
String outputId = "OutputId_" + outputNumber;
GWT.log("Generated OutputId: " + outputId);
return outputId;
}
/**
* Adds the results.
*
* @param dmResponse
* the dm response
*/
public void addResults(DataMinerResponse dmResponse) {
this.dmResponse = dmResponse;
outputNumber = 0;
for (OutputFile outputFile : dmResponse.getListOutput()) {
if (outputFile.getDataType().equals(FileContentType.CSV)) {
PerformFishAnalyticsServiceAsync.Util.getInstance().getCSVFile(outputFile, true,
new AsyncCallback<CSVFile>() {
@Override
public void onFailure(Throwable caught) {
showAlert(caught.getMessage(), AlertType.ERROR, true,
uib_vp_correlation_results_container);
}
@Override
public void onSuccess(CSVFile result) {
csvGenerated.put(result.getFileName(), result);
fillCorrelationMatrix();
}
});
}
}
}
private void fillCorrelationMatrix() {
if (csvGenerated.size() < 2)
return;
String corrIndexFilename = null;
String corrFilename = null;
for (String fileName : csvGenerated.keySet()) {
if (fileName.contains("index")) {
corrIndexFilename = fileName;
} else {
corrFilename = fileName;
}
}
GWT.log("Correlation Matrix Index File: " + corrIndexFilename);
GWT.log("Correlation Matrix File: " + corrFilename);
CSVFile corrIndexCsvFile = csvGenerated.get(corrIndexFilename);
CSVFile corrCsvFile = csvGenerated.get(corrFilename);
GWT.log("Correlation Matrix Index CSV: " + corrIndexCsvFile);
GWT.log("Correlation Matrix CSV: " + corrCsvFile);
HorizontalPanel hp = new HorizontalPanel();
final FlexTable flexTable = new FlexTable();
flexTable.getElement().setId(getOutputId());
flexTable.setStyleName("fixedtable");
flexTable.getElement().getStyle().setMarginBottom(10, Unit.PX);
flexTable.setWidget(0, 0, new Label(""));
CSVRow headerRow = corrIndexCsvFile.getHeaderRow();
// HEADER
for (int i = 1; i < headerRow.getListValues().size(); i++) {
final String headerValue = headerRow.getListValues().get(i);
HTML label = new HTML(headerValue);
label.getElement().getStyle().setFontSize(16, Unit.PX);
final int columnIndex = i;
KPI kpi = getKPIForName(headerValue);
fillKPIReferenceForIndex(0, columnIndex, Arrays.asList(kpi));
flexTable.setWidget(0, i, label);
}
// DATA
for (int i = 0; i < corrIndexCsvFile.getValueRows().size(); i++) {
CSVRow row = corrIndexCsvFile.getValueRows().get(i);
CSVRow rowMatrixColor = corrCsvFile.getValueRows().get(i);
final int rowIndex = i + 1; // adding +1 for header row
for (int j = 0; j < row.getListValues().size(); j++) {
final String rowValue = row.getListValues().get(j);
final String rowMatrixColorValue = rowMatrixColor.getListValues().get(j);
final String theColor = CorrelationValueToColourUtil.getRGBColor(rowMatrixColorValue);
final int columnIndex = j;
final HTML buttonHTML = new HTML(rowValue);
buttonHTML.addStyleName("my-active-html");
if (j == 0) {
HTML label = new HTML(rowValue);
label.getElement().getStyle().setFontSize(16, Unit.PX);
flexTable.setWidget(rowIndex, j, label);
// rowValue is a KPI name
KPI kpi = getKPIForName(rowValue);
fillKPIReferenceForIndex(rowIndex, columnIndex, Arrays.asList(kpi));
continue;
}
// diagonal
else if (rowIndex == j) {
HTML dg = new HTML(rowValue);
dg.getElement().getStyle().setFontSize(18, Unit.PX);
flexTable.setWidget(rowIndex, j, dg);
continue;
// j > 0
} else {
KPI columnKPI = getKPIForName(headerRow.getListValues().get(columnIndex));
// Here the first index is the KPI name
KPI rowKPI = getKPIForName(row.getListValues().get(0));
fillKPIReferenceForIndex(rowIndex, columnIndex, Arrays.asList(columnKPI, rowKPI));
buttonHTML.addClickHandler(new ClickHandler() {
@Override
public void onClick(ClickEvent event) {
// callScatterAndDeaChart(rowIndex, columnIndex,
// button);
callScatter(rowIndex, columnIndex, buttonHTML);
}
});
}
// button.setType(ButtonType.LINK);
// APPLYING STYLE ONLY ON INTERNAL VALUES OF CSV
if (j > 0)
buttonHTML.getElement().getStyle().setColor("#000");
buttonHTML.addAttachHandler(new AttachEvent.Handler() {
@Override
public void onAttachOrDetach(AttachEvent event) {
if (theColor.startsWith("#")) {
GWT.log("Setting backgrounf color: " + theColor);
buttonHTML.getElement().getParentElement().getStyle().setBackgroundColor(theColor);
}
}
});
buttonHTML.getElement().getStyle().setBackgroundColor(theColor);
flexTable.setWidget(rowIndex, j, buttonHTML);
}
}
hp.add(flexTable);
final FlexTable flexLegend = new FlexTable();
flexLegend.getElement().setId(getOutputId());
flexLegend.setStyleName("simpletable");
Map<String, String> map = CorrelationValueToColourUtil.getMap();
flexLegend.setWidget(0, 0, new Label("Legend"));
flexLegend.setWidget(0, 1, new HTML(""));
int i = 1;
for (String key : map.keySet()) {
final String rgbColor = map.get(key);
final HTML theLegendColor = new HTML("");
theLegendColor.getElement().getStyle().setBackgroundColor(rgbColor);
flexLegend.setWidget(i, 0, theLegendColor);
flexLegend.setWidget(i, 1, new HTML(key));
theLegendColor.addAttachHandler(new AttachEvent.Handler() {
@Override
public void onAttachOrDetach(AttachEvent event) {
theLegendColor.getElement().getParentElement().getStyle().setBackgroundColor(rgbColor);
}
});
i++;
}
flexLegend.getElement().getStyle().setMarginLeft(15, Unit.PX);
hp.add(flexLegend);
uib_vp_correlation_results_container.insert(hp, 0);
}
/**
* Fill kpi reference for index.
*
* @param rowIndex
* the row index
* @param columnIndex
* the column index
* @param listKPI
* the list kpi
*/
private void fillKPIReferenceForIndex(int rowIndex, int columnIndex, List<KPI> listKPI) {
String key = generateKey(rowIndex, columnIndex);
kpiMapPointers.put(key, listKPI);
}
/**
* Gets the KPI for indexes.
*
* @param rowIndex
* the row index
* @param columnIndex
* the column index
* @return the KPI for indexes
*/
public List<KPI> getKPIForIndexes(int rowIndex, int columnIndex) {
String key = generateKey(rowIndex, columnIndex);
return kpiMapPointers.get(key);
}
/**
* Generate key.
*
* @param rowIndex
* the row index
* @param columnIndex
* the column index
* @return the string
*/
private String generateKey(int rowIndex, int columnIndex) {
return rowIndex + "-" + columnIndex;
}
/**
* Check valid focus id.
*
* @return the FocusID if it is valid, null otherwise.
*/
public String checkValidFocusID() {
cg_focus_id_correlation.setType(ControlGroupType.NONE);
// CHECK THE FOCUS ID VALUE
String focusID = field_list_focus_id_correlation.getSelectedItemText();
if (focusID == null || focusID.isEmpty()) {
String msgError = "Could not execute a valid Analysis.";
if (selectedAreas == null || selectedAreas.isEmpty()) {
msgError += " Please select another parameters computation";
} else {
msgError += " Select at least the Area of your FARM";
}
showAlert(msgError, AlertType.ERROR, true, uib_vp_correlation_results_container);
cg_focus_id_correlation.setType(ControlGroupType.ERROR);
return null;
}
return focusID;
}
/**
* Call scatter.
*
* @param rowIndex
* the row index
* @param columnIndex
* the column index
* @param button
* the button
*/
private void callScatter(int rowIndex, int columnIndex, HTML button) {
String focusID = checkValidFocusID();
if (focusID == null)
return;
GWT.log("Called ScatterChart at rowIndex: " + rowIndex + ", columnIndex: " + columnIndex);
List<KPI> selectedKPI = getKPIForIndexes(rowIndex, columnIndex);
GWT.log("Selected KPI: " + selectedKPI);
PerformFishAnalyticsController.eventBus
.fireEvent(new CallAlgorithmEvent(DataMinerAlgorithms.SCATTER, focusID, selectedKPI, null));
}
private static native void saveFilePDF(CorrelationPanelResult chart, String filename, String tabTitle,
String tabDescr, int requestId, int outputNumber)/*-{
var that = this;
console.log('saveFilePDF()');
var tTitle = tabTitle;
var tDescr = tabDescr;
var pdoc = new jsPDF("p", "mm", "a4");
pdoc.setProperties({
title : 'PerformFish ' + tTitle,
subject : ' Results',
author : 'PerformFish',
keywords : 'PerformFish',
creator : 'D4Science'
});
var lMargin = 15; //left margin in mm
var rMargin = 15; //right margin in mm
var tMargin = 15; //top margin in mm
var bMargin = 15; //bottom margin in mm
var pdfWidthInMM = 210; // width of A4 in mm
var pdfHeightInMM = 297; // height of A4 in mm
var pageCenter = pdfWidthInMM / 2;
pdoc.setFontSize(24);
var title = "PerformFish " + tTitle;
var titleHeight = pdoc.getLineHeight(title) / pdoc.internal.scaleFactor
var xPos = lMargin;
var yPos = tMargin;
pdoc.text(title, pageCenter, yPos, 'center');
yPos += titleHeight;
pdoc.setFontSize(10);
var lineHeight = pdoc.getLineHeight(tDescr) / pdoc.internal.scaleFactor
var splittedAnalysisDescription = pdoc.splitTextToSize(tDescr,
(pdfWidthInMM - lMargin - rMargin));
var lines = splittedAnalysisDescription.length // splitted text is a string array
var analysisDescriptionHeight = lines * lineHeight
pdoc.text(splittedAnalysisDescription, xPos, yPos, 'left');
yPos += analysisDescriptionHeight;
yPos += 4;
pdoc.setFontSize(10);
pdoc.setFontType("bold");
pdoc.text("Parameters:", xPos, yPos, 'left');
pdoc.setFontSize(10);
pdoc.setFontType("normal");
yPos += 4;
var correlationParametersInputKPIs = $doc
.getElementById('CorrelationParameterInputKPIs');
console.log('InputKPIs: ' + correlationParametersInputKPIs);
pdoc.autoTable({
theme : 'plain',
startY : yPos,
pageBreak : 'auto',
columnStyles : {
0 : {
halign : 'left',
fillColor : [ 211, 225, 241 ]
}
},
html : correlationParametersInputKPIs
});
//head : null,
// body : [
// [ 'Parameters',
// correlationParametersInputKPIs ]
// ]
yPos = pdoc.previousAutoTable.finalY + 6;
yPos += 2;
pdoc.setFontSize(10);
pdoc.setFontType("bold");
pdoc.text("CORRELATION Matrix:", xPos, yPos, 'left');
pdoc.setFontSize(10);
pdoc.setFontType("normal");
yPos += 4;
console.log('OutputNumber: ' + outputNumber);
for (var i = 1; i <= outputNumber; i++) {
var outputId = 'OutputId_' + requestId + '_' + i;
console.log('OutputId: ' + outputId);
var resultElement = $doc.getElementById(outputId);
console.log('Result Element: ' + resultElement);
var resultType = resultElement.className;
console.log('Result Element className: ' + resultType);
if (typeof resultType !== 'undefined' && resultType !== null
&& resultType !== '') {
if (resultType == 'fixedtable' || resultType == 'simpletable') {
console.log('Result Type csv: ' + i);
console.log('Result Content: ' + resultElement.innerHTML);
var checkColor = function(data) {
if (data.section === 'body') {
console.log(data);
if (typeof data.cell !== 'undefined'
&& data.cell !== null) {
if (typeof data.cell.raw !== 'undefined'
&& data.cell.raw !== null) {
console.log(data.cell.raw.innerHTML);
var positive = 'rgb(255, 68, 45)';
var negative = 'rgb(173, 216, 230)';
var nonsignificant = 'rgb(230, 223, 0)';
if (data.cell.raw.innerHTML
.indexOf(positive) >= 0) {
data.cell.styles.fillColor = [ 255, 68,
45 ];
} else {
if (data.cell.raw.innerHTML
.indexOf(negative) >= 0) {
data.cell.styles.fillColor = [ 173,
216, 230 ];
} else {
if (data.cell.raw.innerHTML
.indexOf(nonsignificant) >= 0) {
data.cell.styles.fillColor = [
230, 223, 0 ];
} else {
}
}
}
}
}
}
};
pdoc.autoTable({
theme : 'grid',
startY : yPos,
pageBreak : 'auto',
bodyStyles : {
fontSize : 9
},
didParseCell : checkColor,
html : resultElement
});
yPos = pdoc.previousAutoTable.finalY + 6;
} else {
if (resultType == 'image') {
console.log('Result Type image: ' + i);
var childrenTable = outputNumber.children;
var secondDiv = childrenTable[0].rows[1].cells[0];
var imageElement = secondDiv
.getElementsByTagName('img').item(0);
console.log('Image element: ' + imageElement);
pdoc.addImage(imageElement, lMargin, yPos);
console.log('Image Height: ' + imageElement.height);
yPos += (imageElement.height * 0.26458333);
} else {
console.log('Result Type unknow: ' + i);
}
}
} else {
console.log('Result Type is undefined:' + i);
}
if (i == outputNumber) {
} else {
if (pdfHeightInMM - yPos < pdfHeightInMM / 7) {
pdoc.addPage();
yPos = tMargin; // Restart position
}
}
}
var focusIDElement = $doc
.getElementById('field_list_focus_id_correlation');
console.log('FocusID Element: ' + focusIDElement);
var selectedIndex = focusIDElement.selectedIndex;
if (selectedIndex > -1) {
var value = focusIDElement[selectedIndex].innerText;
yPos += 2;
pdoc.setFontSize(10);
pdoc.setFontType("normal");
pdoc.text("Focus ID: "+value, xPos, yPos, 'left');
pdoc.setFontSize(10);
pdoc.setFontType("normal");
yPos += 4;
}
var numberOfPages = pdoc.internal.getNumberOfPages()
console.log('NumberOfPages: ' + numberOfPages);
for (var k = 1; k <= numberOfPages; k++) {
pdoc.setPage(k);
console.log('CurrentPage: ' + k);
var footner = 'Page ' + k + "/" + numberOfPages;
pdoc.text(footner, pageCenter, pdfHeightInMM - 7, 'center');
}
console.log('Done');
pdoc.save(filename);
}-*/;
}

5
src/main/java/org/gcube/portlets/user/performfishanalytics/client/viewbinder/AnalyticsPanelResult.ui.xml → src/main/java/org/gcube/portlets/user/performfishanalytics/client/viewbinder/CorrelationPanelResult.ui.xml
View File

@ -8,7 +8,10 @@
</ui:style>
<g:HTMLPanel ui:field="field_html_panel" addStyleNames="the_margin">
<b:Button size="SMALL" ui:field="uib_save_pdf_1"
title="Save PDF" />
<g:VerticalPanel ui:field="field_parameters">
<g:VerticalPanel ui:field="field_parameters_container"
addStyleNames="the_margin_top_bottom">