530 lines
23 KiB
Java
530 lines
23 KiB
Java
package org.gcube.application.cms.usecases;
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import com.fasterxml.jackson.core.JsonProcessingException;
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import lombok.extern.slf4j.Slf4j;
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import org.bson.Document;
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import org.gcube.application.cms.custom.gna.concessioni.model.ProfiledConcessione;
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import org.gcube.application.cms.serialization.Serialization;
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import org.gcube.application.cms.tests.TokenSetter;
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import org.gcube.application.cms.usecases.legacyConcessioni.ConcessioniManagementUtils;
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import org.gcube.application.geoportal.common.model.configuration.Configuration;
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import org.gcube.application.geoportal.common.model.document.Project;
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import org.gcube.application.geoportal.common.model.document.access.Access;
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import org.gcube.application.geoportal.common.model.document.access.AccessPolicy;
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import org.gcube.application.geoportal.common.model.document.lifecycle.LifecycleInformation;
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import org.gcube.application.geoportal.common.model.legacy.*;
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import org.gcube.application.geoportal.common.model.rest.CreateRelationshipRequest;
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import org.gcube.application.geoportal.common.model.rest.QueryRequest;
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import org.gcube.application.geoportal.common.model.rest.StepExecutionRequest;
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import org.gcube.application.geoportal.common.model.rest.TempFile;
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import org.gcube.application.geoportal.common.model.useCaseDescriptor.Field;
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import org.gcube.application.geoportal.common.rest.Projects;
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import org.gcube.application.geoportal.common.utils.FileSets;
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import org.gcube.application.geoportal.common.utils.Files;
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import org.gcube.application.geoportal.common.utils.tests.GCubeTest;
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import java.io.File;
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import java.io.IOException;
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import java.rmi.RemoteException;
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import java.sql.SQLOutput;
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import java.time.Instant;
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import java.util.*;
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import java.util.concurrent.*;
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import java.util.concurrent.atomic.AtomicInteger;
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import java.util.concurrent.atomic.AtomicLong;
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import java.util.concurrent.atomic.AtomicReference;
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import java.util.function.Supplier;
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import java.util.regex.Matcher;
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import java.util.stream.Collectors;
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import static org.gcube.application.geoportal.client.plugins.GeoportalAbstractPlugin.projects;
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@Slf4j
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public class ExportConcessioniAsProjects {
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public static void main(String[] args) throws InterruptedException, IOException {
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// read from imported folder
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File dir= new File("/Users/fabioisti/git/gcube-cms-suite/import1668778302348");
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// select only cluster
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// dir = new File(dir,"cluster_1");
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File errorDir=new File(dir,"errors_"+ Instant.now().toString());
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Boolean pushProjects=true;
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// File dir= new File("test-data/test-packages/related_concessioni");
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// File dir = new File("/Users/fabioisti/Documents/Work/GNA DATA/Bug_23378");
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//String targetContext="/gcube/devsec/devVRE";
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// String targetContext="/pred4s/preprod/preVRE";
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Projects<Project> client=projects("profiledConcessioni").build();;
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Integer totalCount = 0;
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// Title - > Time ordered list
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ConcessioniManagementUtils.ImportFolder importFolder = ConcessioniManagementUtils.loadImportFolder(dir);
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Files.saveString(importFolder.sort(),new File(dir,"relationships.csv").toPath());
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TokenSetter.set(GCubeTest.getContext());
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if(!pushProjects){
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System.out.println("PUSH PROJECTS FLAG IS FALSE.. CLOSING.");
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StringBuilder reportBuilder = new StringBuilder();
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StringBuilder concReportBuilder = new StringBuilder();
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importFolder.getRelationshipMap().forEach((s,l)->{
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l.forEach(c->concReportBuilder.append(c.getReport().getStatus()+","+c.getReport().getWarningMessages()+","+c.getMongo_id()+","+c.getNome()+"\n"));
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try {
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// reportBuilder.append(getExisting(l.get(0),client).size()+","+s+"\n");
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} catch (Throwable e) {
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log.error("Unable to get count for {} ",s,e);
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throw new RuntimeException(e);
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}
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});
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Files.saveString(reportBuilder.toString(),new File(dir,"found.csv").toPath());
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Files.saveString(concReportBuilder.toString(),new File(dir,"originalStatuses.csv").toPath());
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System.exit(0);
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}
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// StorageUtils storage = new StorageUtils();
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AtomicLong count = new AtomicLong(0);
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AtomicLong warnCount = new AtomicLong(0);
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AtomicLong errCount = new AtomicLong(0);
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ExecutorService service = Executors.newFixedThreadPool(1);
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long startProcess = System.currentTimeMillis();
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importFolder.getRelationshipMap().forEach((s,l)->{
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AtomicReference<Boolean> publish = new AtomicReference<>(true);
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AtomicReference<Boolean> delete = new AtomicReference<>(false);
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// Check if exists
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Concessione c = l.get(0);
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try {
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List<Project> existing= getExisting(c,client);
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if(existing.isEmpty()) log.info("Not Found {}",c.getNome());
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else {
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// found projects, check status
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existing.forEach(project -> {
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if (!project.getLifecycleInformation().getLastOperationStatus().equals(LifecycleInformation.Status.OK))
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delete.set(true);
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});
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if(delete.get()){
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log.debug("Deleting error set for {}",c.getNome());
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for (Project project : existing) {
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client.deleteById(project.getId(),true);
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}
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}else publish.set(false);
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}
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}catch(NullPointerException e){}
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catch (Throwable t){throw new RuntimeException("Unexpected Exception while checking for "+c.getNome());}
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log.info("Project name {} publish : {}",s,publish);
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if(publish.get()) {
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String relationshipTarget = null;
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for (Concessione concessione : l) {
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String finalRelationshipTarget = relationshipTarget;
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CompletableFuture<String> lastPublished = CompletableFuture.supplyAsync(new Supplier<String>() {
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@Override
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public String get() {
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return publish(concessione, client, errCount, count, finalRelationshipTarget, errorDir);
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}
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}, service);
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try {
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relationshipTarget = lastPublished.get();
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} catch (InterruptedException e) {
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throw new RuntimeException(e);
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} catch (ExecutionException e) {
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throw new RuntimeException(e);
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}
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}
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}
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});
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while (!service.awaitTermination(1, TimeUnit.MINUTES)) {
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log.info("Waiting .. completed {}, out of {} ",count.get(),importFolder.getLoadedCount());
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if(importFolder.getLoadedCount().get()==count.get()) service.shutdown();
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}
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System.out.println("Completed "+count.get()+" [elapsedTime = "+(System.currentTimeMillis()-startProcess)/1000+" sec] [warn : "+warnCount.get()+", err : "+errCount.get()+"]");
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Configuration conf = client.getConfiguration();
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conf.getArchives().stream().forEach(archive -> {
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if (archive.getType().equals("DOCUMENT-STORE-COLLECTION")){
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archive.forEach((s, o) ->{
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System.out.println(s+"\t:\t"+o);
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});
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}
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});
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}
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private static String publish(Concessione c, Projects<Project> client, AtomicLong errCount, AtomicLong count, String relationshipTarget, File errorDir){
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Project project = null;
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try {
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long startTime = System.currentTimeMillis();
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FileSets.RequestBuilder req=null;
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log.info("Using {} {}",c.getNome(),c.getMongo_id());
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//Copy core fields
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Document doc=new Document();
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doc.put(ProfiledConcessione.NOME,c.getNome());
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doc.put(ProfiledConcessione.INTRODUZIONE,c.getIntroduzione());
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doc.put(ProfiledConcessione.DESCRIZIONE_CONTENUTO,c.getDescrizioneContenuto());
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doc.put(ProfiledConcessione.AUTHORS,c.getAuthors());
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doc.put(ProfiledConcessione.CONTRIBUTORE,c.getContributore());
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doc.put(ProfiledConcessione.TITOLARI,c.getTitolari());
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doc.put(ProfiledConcessione.RESPONSABILE,c.getResponsabile());
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doc.put(ProfiledConcessione.EDITORS,c.getEditore());
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doc.put(ProfiledConcessione.FONTI_FINANZIAMENTO,c.getFontiFinanziamento());
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doc.put(ProfiledConcessione.SOGGETTO,c.getSoggetto());
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doc.put(ProfiledConcessione.RISORSE_CORRELATE,c.getRisorseCorrelate());
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doc.put(ProfiledConcessione.DATA_INZIO_PROGETTO,c.getDataInizioProgetto());
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doc.put(ProfiledConcessione.DATA_FINE_PROGETTO,c.getDataFineProgetto());
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doc.put(ProfiledConcessione.TITOLARE_LICENZA,c.getTitolareLicenza());
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doc.put(ProfiledConcessione.TITOLARE_COPYRIGHT,c.getTitolareCopyright());
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doc.put(ProfiledConcessione.PAROLE_CHIAVE_LIBERE,c.getParoleChiaveLibere());
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doc.put(ProfiledConcessione.PAREOLE_CHIAVE_ICCD,c.getParoleChiaveICCD());
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// CREATE Project
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project = client.createNew(doc);
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// set Access
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Access toSetAccess = new Access();
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toSetAccess.setPolicy(AccessPolicy.valueOf(c.getPolicy().toString()));
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toSetAccess.setLicense(c.getLicenzaID());
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project = client.setAccessPolicy(project.getId(),toSetAccess);
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// Relazione
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if(c.getRelazioneScavo()!=null) {
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RelazioneScavo rel=c.getRelazioneScavo();
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Document relDoc= new Document();
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relDoc.put(ProfiledConcessione.Sections.TITOLO,rel.getTitolo());
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relDoc.put(ProfiledConcessione.Relazione.RESPONSABILI,rel.getResponsabili());
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relDoc.put(ProfiledConcessione.SOGGETTO,rel.getSoggetto());
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Document updated =project.getTheDocument();
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updated.put(ProfiledConcessione.RELAZIONE_SCAVO,relDoc);
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project = client.updateDocument(project.getId(),updated);
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List<PersistedContent> content=rel.getActualContent();
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if(content!=null && !content.isEmpty()) {
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req = FileSets.build("$." + ProfiledConcessione.RELAZIONE_SCAVO, "fileset",
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"$." + ProfiledConcessione.RELAZIONE_SCAVO + "." + Field.CHILDREN
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+ "[?(@.fileset)]");
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req.addAll(convertFiles(content));
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req.setAccess(getAccess(rel));
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project = client.registerFileSet(project.getId(),req.getTheRequest());
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}
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// upload fileset
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}
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if(c.getAbstractRelazione()!=null) {
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AbstractRelazione abs=c.getAbstractRelazione();
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Document absDoc= new Document();
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absDoc.put(ProfiledConcessione.Sections.TITOLO,abs.getTitolo());
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absDoc.put(ProfiledConcessione.AbstractRelazione.ABSTRACT_ENG,abs.getAbstractEng());
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absDoc.put(ProfiledConcessione.AbstractRelazione.ABSTRACT_ITA,abs.getAbstractIta());
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Document updated =project.getTheDocument();
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updated.put(ProfiledConcessione.ABSTRACT_RELAZIONE,absDoc);
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project = client.updateDocument(project.getId(),updated);
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//TODO ask Fra about mapping
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// list persited content -> absIta, absEng
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// List<PersistedContent> content=abs.getActualContent();
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// if(content!=null && !content.isEmpty()) {
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// req = FileSets.build("$." + ProfiledConcessione.RELAZIONE_SCAVO, "fileset",
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// "$." + ProfiledConcessione.RELAZIONE_SCAVO + "." + Field.CHILDREN
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// + "[?(@.fileset)]");
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// content.forEach(uploader);
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// project = client.registerFileSet(project.getId(),req.getTheRequest());
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// }
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}
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//Immagini rappresentative
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if(c.getImmaginiRappresentative()!=null){
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List<Document> imgs=new ArrayList<>();
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for (int i = 0; i < c.getImmaginiRappresentative().size(); i++) {
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UploadedImage img=c.getImmaginiRappresentative().get(i);
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Document imgDoc=new Document();
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imgDoc.put(ProfiledConcessione.Sections.TITOLO,img.getTitolo());
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imgDoc.put(ProfiledConcessione.Immagini.DIDASCALIA,img.getDidascalia());
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imgDoc.put(ProfiledConcessione.Relazione.RESPONSABILI,img.getResponsabili());
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imgDoc.put(ProfiledConcessione.SOGGETTO,img.getSoggetto());
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imgs.add(imgDoc);
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}
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Document updated =project.getTheDocument();
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updated.put(ProfiledConcessione.IMMAGINI_RAPPRESENTATIVE,imgs);
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project = client.updateDocument(project.getId(),updated);
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// FileSets
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for (int i = 0; i < c.getImmaginiRappresentative().size(); i++) {
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UploadedImage img=c.getImmaginiRappresentative().get(i);
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List<PersistedContent> content=img.getActualContent();
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if(content!=null && !content.isEmpty()) {
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req = FileSets.build("$." + ProfiledConcessione.IMMAGINI_RAPPRESENTATIVE+"["+i+"]", "fileset",
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"$." + ProfiledConcessione.IMMAGINI_RAPPRESENTATIVE + "." + Field.CHILDREN
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+ "[?(@.fileset)]");
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req.addAll(convertFiles(content));
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req.setAccess(getAccess(img));
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project = client.registerFileSet(project.getId(),req.getTheRequest());
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}
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}
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}
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// POS
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if(c.getPosizionamentoScavo()!=null) {
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LayerConcessione l=c.getPosizionamentoScavo();
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Document lDoc= new Document();
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lDoc.put(ProfiledConcessione.Sections.TITOLO,l.getTitolo());
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lDoc.put(ProfiledConcessione.RESPONSABILE,l.getResponsabile());
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lDoc.put(ProfiledConcessione.AUTHORS,l.getAuthors());
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lDoc.put(ProfiledConcessione.PAREOLE_CHIAVE_ICCD,l.getParoleChiaveICCD());
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lDoc.put(ProfiledConcessione.PAROLE_CHIAVE_LIBERE,l.getParoleChiaveLibere());
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lDoc.put(ProfiledConcessione.Layers.TOPIC,l.getTopicCategory());
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lDoc.put(ProfiledConcessione.Layers.SUB_TOPIC,l.getSubTopic());
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lDoc.put(ProfiledConcessione.Layers.METODO_RACCOLTA,l.getMetodoRaccoltaDati());
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lDoc.put(ProfiledConcessione.Layers.SCALA_ACQUISIZIONE,l.getScalaAcquisizione());
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lDoc.put(ProfiledConcessione.Layers.VALUTAZIONE_QUALITA,l.getValutazioneQualita());
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lDoc.put(ProfiledConcessione.Sections.ABSTRACT,l.getAbstractSection());
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Document updated =project.getTheDocument();
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updated.put(ProfiledConcessione.POSIZIONAMENTO_SCAVO,lDoc);
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project = client.updateDocument(project.getId(),updated);
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List<PersistedContent> content=l.getActualContent();
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if(content!=null && !content.isEmpty()) {
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req = FileSets.build("$." + ProfiledConcessione.POSIZIONAMENTO_SCAVO, "fileset",
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"$." + ProfiledConcessione.POSIZIONAMENTO_SCAVO + "." + Field.CHILDREN
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+ "[?(@.fileset)]");
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req.addAll(convertFiles(content));
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req.setAccess(getAccess(l));
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project = client.registerFileSet(project.getId(),req.getTheRequest());
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}
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// upload fileset
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}
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// Piante
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if(c.getPianteFineScavo()!=null){
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List<Document> piante=new ArrayList<>();
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for (int i = 0; i < c.getPianteFineScavo().size(); i++) {
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LayerConcessione l=c.getPianteFineScavo().get(i);
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Document lDoc= new Document();
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lDoc.put(ProfiledConcessione.Sections.TITOLO,l.getTitolo());
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lDoc.put(ProfiledConcessione.RESPONSABILE,l.getResponsabile());
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lDoc.put(ProfiledConcessione.AUTHORS,l.getAuthors());
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lDoc.put(ProfiledConcessione.PAREOLE_CHIAVE_ICCD,l.getParoleChiaveICCD());
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lDoc.put(ProfiledConcessione.PAROLE_CHIAVE_LIBERE,l.getParoleChiaveLibere());
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lDoc.put(ProfiledConcessione.Layers.TOPIC,l.getTopicCategory());
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lDoc.put(ProfiledConcessione.Layers.SUB_TOPIC,l.getSubTopic());
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lDoc.put(ProfiledConcessione.Layers.METODO_RACCOLTA,l.getMetodoRaccoltaDati());
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lDoc.put(ProfiledConcessione.Layers.SCALA_ACQUISIZIONE,l.getScalaAcquisizione());
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lDoc.put(ProfiledConcessione.Layers.VALUTAZIONE_QUALITA,l.getValutazioneQualita());
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lDoc.put(ProfiledConcessione.Sections.ABSTRACT,l.getAbstractSection());
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piante.add(lDoc);
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}
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Document updated =project.getTheDocument();
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updated.put(ProfiledConcessione.PIANTE_FINE_SCAVO,piante);
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project = client.updateDocument(project.getId(),updated);
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// FileSets
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for (int i = 0; i < c.getPianteFineScavo().size(); i++) {
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LayerConcessione layerConcessione=c.getPianteFineScavo().get(i);
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List<PersistedContent> content=layerConcessione.getActualContent();
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if(content!=null && !content.isEmpty()) {
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req = FileSets.build("$." + ProfiledConcessione.PIANTE_FINE_SCAVO+"["+i+"]", "fileset",
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"$." + ProfiledConcessione.PIANTE_FINE_SCAVO + "." + Field.CHILDREN
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+ "[?(@.fileset)]");
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req.addAll(convertFiles(content));
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req.setAccess(getAccess(layerConcessione));
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project = client.registerFileSet(project.getId(),req.getTheRequest());
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}
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}
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}
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// Relationship
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if(relationshipTarget!=null){
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CreateRelationshipRequest relReq = new CreateRelationshipRequest();
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relReq.setProjectId(project.getId());
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relReq.setRelationshipId("follows");
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relReq.setTargetId(relationshipTarget);
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client.setRelation(relReq);
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}
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// Submit for review
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project = client.performStep(project.getId(),step());
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System.out.println("Done "+c.getId()+" in "+(System.currentTimeMillis()-startTime)/1000+" sec");
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} catch (Throwable throwable) {
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System.err.println(throwable);
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errCount.incrementAndGet();
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String ser = null;
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File destFile=null;
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//if(relationshipTarget!=null) Files.saveString();
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if(project!=null) {
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ser = org.gcube.application.cms.serialization.Serialization.write(project);
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destFile = new File(errorDir,"project_"+ project.getId());
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}else{
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ser = org.gcube.application.cms.serialization.Serialization.write(c);
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destFile = new File(errorDir,"conc_"+ c.getMongo_id());
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}
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Files.saveString(ser, destFile.toPath());
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} finally {
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count.incrementAndGet();
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return project!=null? project.getId() : null;
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}
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}
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private static final List<TempFile> convertFiles(List<PersistedContent> content){
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return content.stream().
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filter(p -> p instanceof WorkspaceContent)
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.map(p -> new TempFile(null, ((WorkspaceContent) p).getLink(), ((WorkspaceContent) p).getName()))
|
|
.collect(Collectors.toList());
|
|
}
|
|
|
|
private static final Access getAccess(AssociatedContent content){
|
|
Access toReturn = new Access();
|
|
toReturn.setLicense(content.getLicenseID());
|
|
toReturn.setPolicy(AccessPolicy.valueOf(content.getPolicy().toString()));
|
|
return toReturn;
|
|
}
|
|
|
|
private static final StepExecutionRequest step(){
|
|
StepExecutionRequest toReturn = new StepExecutionRequest();
|
|
toReturn.setStepID("SUBMIT-FOR-REVIEW");
|
|
return toReturn;
|
|
}
|
|
|
|
|
|
private static List<Project> getExisting(Concessione c,Projects client) throws RemoteException, JsonProcessingException, NullPointerException {
|
|
try {
|
|
QueryRequest req = new QueryRequest();
|
|
String queryString = String.format("{\"_theDocument.nome\" :{\"$eq\" : %1$s}}", quote(c.getNome()));
|
|
log.debug("Query String is {}", queryString);
|
|
req.setFilter(Document.parse(queryString));
|
|
AtomicInteger count = new AtomicInteger(0);
|
|
StringBuilder msg = new StringBuilder();
|
|
ArrayList<Project> toReturn = new ArrayList<>();
|
|
|
|
client.query(req).forEachRemaining(p -> {
|
|
Project proj = (Project) p;
|
|
count.incrementAndGet();
|
|
toReturn.add(proj);
|
|
msg.append(proj.getId() + ",");
|
|
});
|
|
log.debug("Found {} for {}", count.get(), c.getNome());
|
|
return toReturn;
|
|
}catch(Throwable t){
|
|
log.warn("ERROR while querying ",t);
|
|
throw t;
|
|
}
|
|
}
|
|
|
|
|
|
public static String quote(String string) {
|
|
if(string!=null)
|
|
// return "\""+string.replaceAll("\"","\"")+"\"";
|
|
return "\""+string.replaceAll("\"",Matcher.quoteReplacement("\\\""))+"\"";
|
|
else return "\"\"";
|
|
// if (string == null || string.length() == 0) {
|
|
// return "\"\"";
|
|
// }
|
|
//
|
|
// char c = 0;
|
|
// int i;
|
|
// int len = string.length();
|
|
// StringBuilder sb = new StringBuilder(len + 4);
|
|
// String t;
|
|
//
|
|
// sb.append('"');
|
|
// for (i = 0; i < len; i += 1) {
|
|
// c = string.charAt(i);
|
|
// switch (c) {
|
|
// case '\\':
|
|
// case '"':
|
|
// sb.append('\\');
|
|
// sb.append(c);
|
|
// break;
|
|
// case '/':
|
|
// // if (b == '<') {
|
|
// sb.append('\\');
|
|
// // }
|
|
// sb.append(c);
|
|
// break;
|
|
// case '\b':
|
|
// sb.append("\\b");
|
|
// break;
|
|
// case '\t':
|
|
// sb.append("\\t");
|
|
// break;
|
|
// case '\n':
|
|
// sb.append("\\n");
|
|
// break;
|
|
// case '\f':
|
|
// sb.append("\\f");
|
|
// break;
|
|
// case '\r':
|
|
// sb.append("\\r");
|
|
// break;
|
|
// default:
|
|
// if (c < ' ') {
|
|
// t = "000" + Integer.toHexString(c);
|
|
// sb.append("\\u" + t.substring(t.length() - 4));
|
|
// } else {
|
|
// sb.append(c);
|
|
// }
|
|
// }
|
|
// }
|
|
// sb.append('"');
|
|
// return sb.toString();
|
|
}
|
|
}
|