579 lines
29 KiB
Java
579 lines
29 KiB
Java
package org.gcube.application.geoportal.service.engine.mongo;
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import com.fasterxml.jackson.core.JsonProcessingException;
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import com.mongodb.client.MongoCollection;
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import com.mongodb.client.MongoDatabase;
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import com.vdurmont.semver4j.Semver;
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import lombok.Getter;
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import lombok.extern.slf4j.Slf4j;
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import org.apache.commons.collections.ArrayStack;
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import org.apache.commons.io.IOUtils;
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import org.bson.Document;
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import org.bson.types.ObjectId;
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import org.gcube.application.cms.plugins.LifecycleManager;
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import org.gcube.application.cms.plugins.faults.EventException;
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import org.gcube.application.cms.plugins.faults.StepException;
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import org.gcube.application.cms.plugins.model.PluginDescriptor;
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import org.gcube.application.cms.plugins.reports.DocumentHandlingReport;
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import org.gcube.application.cms.plugins.reports.StepExecutionReport;
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import org.gcube.application.cms.plugins.requests.BaseRequest;
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import org.gcube.application.cms.plugins.requests.EventExecutionRequest;
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import org.gcube.application.cms.plugins.requests.StepExecutionRequest;
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import org.gcube.application.geoportal.common.faults.StorageException;
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import org.gcube.application.geoportal.common.model.configuration.Archive;
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import org.gcube.application.geoportal.common.model.configuration.Index;
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import org.gcube.application.geoportal.common.model.document.*;
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import org.gcube.application.geoportal.common.model.document.access.Access;
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import org.gcube.application.geoportal.common.model.document.access.AccessPolicy;
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import org.gcube.application.geoportal.common.model.document.accounting.AccountingInfo;
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import org.gcube.application.geoportal.common.model.document.accounting.PublicationInfo;
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import org.gcube.application.geoportal.common.model.document.filesets.RegisteredFile;
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import org.gcube.application.geoportal.common.model.document.filesets.RegisteredFileSet;
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import org.gcube.application.geoportal.common.model.document.lifecycle.LifecycleInformation;
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import org.gcube.application.geoportal.common.model.useCaseDescriptor.Field;
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import org.gcube.application.geoportal.common.model.useCaseDescriptor.HandlerDeclaration;
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import org.gcube.application.geoportal.common.model.useCaseDescriptor.UseCaseDescriptor;
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import org.gcube.application.geoportal.common.model.configuration.Configuration;
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import org.gcube.application.geoportal.common.model.rest.QueryRequest;
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import org.gcube.application.geoportal.common.model.rest.RegisterFileSetRequest;
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import org.gcube.application.geoportal.common.model.rest.TempFile;
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import org.gcube.application.geoportal.common.model.JSONPathWrapper;
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import org.gcube.application.geoportal.common.utils.ContextUtils;
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import org.gcube.application.geoportal.common.utils.StorageUtils;
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import org.gcube.application.cms.implementations.ImplementationProvider;
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import org.gcube.application.geoportal.service.engine.WorkspaceManager;
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import org.gcube.application.geoportal.common.model.rest.ConfigurationException;
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import org.gcube.application.geoportal.service.engine.providers.PluginManager;
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import org.gcube.application.geoportal.service.engine.providers.ProfileMapCache;
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import org.gcube.application.geoportal.service.model.internal.faults.DeletionException;
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import org.gcube.application.cms.serialization.Serialization;
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import org.gcube.application.geoportal.service.model.internal.faults.RegistrationException;
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import org.gcube.application.geoportal.service.utils.UserUtils;
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import org.gcube.common.storagehub.client.dsl.FolderContainer;
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import org.gcube.common.storagehub.model.exceptions.StorageHubException;
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import javax.ws.rs.WebApplicationException;
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import javax.ws.rs.core.Response;
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import java.io.IOException;
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import java.io.InputStream;
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import java.net.URL;
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import java.security.InvalidParameterException;
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import java.time.LocalDateTime;
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import java.util.*;
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import java.util.concurrent.LinkedBlockingQueue;
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import java.util.function.Consumer;
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import static org.gcube.application.cms.serialization.Serialization.*;
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@Slf4j
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public class ProfiledMongoManager extends MongoManager implements MongoManagerI<Project>{
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@Getter
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UseCaseDescriptor useCaseDescriptor;
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@Override
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protected String mongoIDFieldName() {
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return ID;
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}
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public ProfiledMongoManager(String profileId) throws ConfigurationException, RegistrationException {
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// Check UseCaseDescriptor ID
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log.info("Loading useCaseDescriptor ID {} ",profileId);
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if(profileId==null) throw new InvalidParameterException("UseCaseDescriptor ID cannot be null");
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Map<String, UseCaseDescriptor> profiles=ImplementationProvider.get().getEngineByManagedClass(ProfileMapCache.ProfileMap.class);
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useCaseDescriptor = ImplementationProvider.get().getEngineByManagedClass(UCDManagerI.class).getById(profileId);
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if(useCaseDescriptor == null )
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throw new WebApplicationException("UseCaseDescriptor " + profileId + " not registered", Response.Status.NOT_FOUND);
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// Connect to DB
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init(getToUseCollectionName());
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}
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private String getToUseCollectionName(){
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//TODO collection name in UCD
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return useCaseDescriptor.getId();
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}
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@Getter(lazy = true)
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private final LifecycleManager manager=getLCManager();
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private LifecycleManager getLCManager() {
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try{
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LifecycleManager toReturn=null;
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//Getting Lifecycle Manager declaration from UseCaseDescriptor
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List<HandlerDeclaration> handlerDeclarations= useCaseDescriptor.getHandlersMapByType().get(PluginDescriptor.BaseTypes.LIFECYCLE_MANAGER);
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if(handlerDeclarations==null || handlerDeclarations.isEmpty()) throw new ConfigurationException("No Lifecycle Handler defined for useCaseDescriptor ID "+ useCaseDescriptor.getId());
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if(handlerDeclarations.size()>1) throw new ConfigurationException("Too many Lifecycle Handlers defined ("+handlerDeclarations+") in useCaseDescriptor ID "+ useCaseDescriptor.getId());
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HandlerDeclaration lcHandlerDeclaration=handlerDeclarations.get(0);
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// Loading Lifecycle Manager
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log.debug("Looking for handler {} ",lcHandlerDeclaration);
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toReturn=(LifecycleManager) ImplementationProvider.get().
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getEngineByManagedClass(PluginManager.PluginMap.class).get(lcHandlerDeclaration.getId());
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if(toReturn==null) throw new ConfigurationException("Unable to find Lifecycle Manager Plugin. ID "+lcHandlerDeclaration.getId());
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return toReturn;
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} catch(Throwable t){
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log.warn("Unable to load LC Manager ",t);
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return null;
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}
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}
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@Override
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public Project registerNew(Document toRegisterDoc) throws IOException, StepException, EventException {
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log.info("Registering new document in {} ", useCaseDescriptor.getId());
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log.debug("Going to register {}",toRegisterDoc.toJson());
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Project toRegister = new Project();
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toRegister.setTheDocument(toRegisterDoc);
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PublicationInfo pubInfo=new PublicationInfo();
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pubInfo.setCreationInfo(UserUtils.getCurrent().asInfo());
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// TODO Set Access From UseCaseDescriptor
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Access access=new Access();
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access.setLicense("");
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access.setPolicy(AccessPolicy.OPEN);
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pubInfo.setAccess(access);
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toRegister.setInfo(pubInfo);
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toRegister.setProfileID(useCaseDescriptor.getId());
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toRegister.setProfileVersion(useCaseDescriptor.getVersion());
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toRegister.setVersion(new Semver("1.0.0"));
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LifecycleInformation draftInfo=new LifecycleInformation().cleanState();
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draftInfo.setPhase(LifecycleInformation.DRAFT_PHASE);
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draftInfo.setLastOperationStatus(LifecycleInformation.Status.OK);
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toRegister.setLifecycleInformation(draftInfo);
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// Apply Lifecycle
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toRegister = triggerEvent(toRegister,EventExecutionRequest.Events.ON_INIT_DOCUMENT,null);
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log.debug("Going to register {} ",toRegister);
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// Insert object
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ObjectId id =insertDoc(asDocumentWithId(toRegister));
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log.info("Obtained id {} ",id);
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return getByID(id.toHexString());
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}
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@Override
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public Project update(String id, Document toSet) throws IOException, EventException {
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log.trace("Replacing {} ",toSet);
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Project toUpdate=getByID(id);
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toUpdate.setTheDocument(toSet);
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toUpdate.getLifecycleInformation().cleanState();
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toUpdate=onUpdate(toUpdate);
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Project toReturn =convert(replaceDoc(asDocumentWithId(toUpdate),new ObjectId(id)), Project.class);
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log.debug("Updated Project is {}",toReturn);
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return toReturn;
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}
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private Project onUpdate(Project toUpdate) throws EventException {
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UserUtils.AuthenticatedUser u = UserUtils.getCurrent();
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toUpdate.getInfo().setLastEditInfo(u.asInfo());
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toUpdate.setVersion(toUpdate.getVersion().withIncPatch());
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return triggerEvent(toUpdate,EventExecutionRequest.Events.ON_INIT_DOCUMENT,null);
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}
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@Override
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public void delete(String id,boolean force) throws DeletionException {
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log.debug("Deleting by ID {}, force {}",id,force);
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try{
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Project doc =getByID(id);
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// TODO INVOKE LIFECYCLE
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//if(!force&&isPublished(id)) throw new Exception("Cannot delete published documents. Unpublish it or use force = true");
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try{
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// TODO CHECK PHASE AND STATUS
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// DEINDEX
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// DEMATERIALIZE
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// DELETE CONTENT
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// DELETE ENTRY
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throw new DeletionException("IMPLEMENT THIS");
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// delete(asId(id), getCollectionName());
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}catch(DeletionException e) {
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//storing updated - partially deleted
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// concessione=onUpdate(concessione);
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// replace(asDocumentWithId(concessione), collectionName);
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throw e;
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}
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}catch(Throwable t){
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throw new DeletionException("Unable to delete "+id,t);
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}
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}
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@Override
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public Project getByID(String id) throws WebApplicationException{
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Document doc=getDocById(asId(id));
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if(doc==null) throw new WebApplicationException("No document with ID "+id);
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return convert(doc, Project.class);
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}
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@Override
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public Iterable<Document> query(QueryRequest queryRequest) {
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log.info("Querying {} ",queryRequest);
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LinkedBlockingQueue queue=new LinkedBlockingQueue<Project>();
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queryDoc(queryRequest).forEach(
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(Consumer<? super Document>) (Document d)->{try{
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queue.put(d);
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}catch(Throwable t){log.warn("Unable to translate "+d);}});
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log.info("Returned {} elements ",queue.size());
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return queue;
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}
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@Override
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public Iterable<Project> filter(QueryRequest queryRequest) {
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log.info("Searching concessione for filter {} ",queryRequest);
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LinkedBlockingQueue queue=new LinkedBlockingQueue<Project>();
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queryDoc(queryRequest).forEach(
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(Consumer<? super Document>) (Document d)->{try{
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queue.put(d);
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}catch(Throwable t){log.warn("Unable to translate "+d);}});
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log.info("Returned {} elements ",queue.size());
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return queue;
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}
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@Override
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public Project performStep(String id, String step, Document options) throws StepException, JsonProcessingException {
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Project document = getByID(id);
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try{
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document.getLifecycleInformation().cleanState();
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document = step(document, step, options);
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} catch(Throwable t){
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log.error("[UseCaseDescriptor {} ] ERROR Invoking Step {} on document {}" , useCaseDescriptor.getId(),step,id,t);
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LifecycleInformation info = new LifecycleInformation();
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info.setPhase(document.getLifecycleInformation().getPhase());
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info.setLastOperationStatus(LifecycleInformation.Status.ERROR);
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info.addErrorMessage(t.getMessage());
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info.setLastInvokedStep(step);
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document.setLifecycleInformation(info);
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}finally{
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log.info("Storing {} [UseCaseDescriptor {}] After Step {}, Status : {} " ,id, useCaseDescriptor.getId(),
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step,document.getLifecycleInformation().getLastOperationStatus());
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log.debug("LifecycleInformation is {} ",document.getLifecycleInformation());
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if(log.isTraceEnabled())log.trace("Document is {} ",Serialization.write(document));
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return convert(replaceDoc(asDocumentWithId(document),new ObjectId(id)), Project.class);
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}
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}
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/**
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* NB Put at path :
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*
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* Path Examples
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* artifact
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* images
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* images[1]
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* layers[?(@.name = 'myName')].fileset
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*
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*
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*
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*/
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@Override
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public Project registerFileSet(String id, RegisterFileSetRequest request) throws ConfigurationException, StorageHubException, StorageException, StepException, JsonProcessingException, DeletionException, EventException {
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log.info("Registering Fileset for {} [useCaseDescriptor ID {}], Request is {} ",id, useCaseDescriptor.getId(),request);
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List<TempFile> files=request.getStreams();
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Document attributes =request.getAttributes();
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Project doc=getByID(id);
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doc.getLifecycleInformation().cleanState();
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doc.getLifecycleInformation().setLastOperationStatus(LifecycleInformation.Status.OK);
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WorkspaceManager ws=new WorkspaceManager();
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StorageUtils storage=ImplementationProvider.get().getEngineByManagedClass(StorageUtils.class);
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log.debug("Checking field {} definition in {}",request.getFieldDefinitionPath(), useCaseDescriptor.getId());
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Field fieldDefinition=getFieldDefinition(useCaseDescriptor,request.getFieldDefinitionPath());
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JSONPathWrapper docWrapper=new JSONPathWrapper(doc.getTheDocument().toJson());
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List<String> matchingPaths = docWrapper.getMatchingPaths(request.getParentPath());
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if(matchingPaths.size()>1) throw new WebApplicationException("Multiple Destination matching parent path "+request.getParentPath(),Response.Status.BAD_REQUEST);
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if(matchingPaths.isEmpty()) throw new WebApplicationException("PArent path not found at "+request.getParentPath(),Response.Status.BAD_REQUEST);
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String parentMatchingPath = matchingPaths.get(0);
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List<Object> foundElementsByMatchingPaths = docWrapper.getByPath(parentMatchingPath);
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if(foundElementsByMatchingPaths == null || foundElementsByMatchingPaths.isEmpty())
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throw new WebApplicationException("No element found at "+ parentMatchingPath,Response.Status.BAD_REQUEST);
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Document parent = Serialization.asDocument(foundElementsByMatchingPaths.get(0));
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// PREPARE REGISTERED FS
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// MANAGE CLASH
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switch (request.getClashOption()){
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case REPLACE_EXISTING: {
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if(fieldDefinition.isCollection())
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throw new WebApplicationException("Cannot replace repeatable field "+request.getFieldDefinitionPath()+".",Response.Status.BAD_REQUEST);
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// DELETE EXISTING AND PUT
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RegisteredFileSet toDelete = Serialization.convert(parent.get(request.getFieldName()),RegisteredFileSet.class);
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if(!(toDelete == null)&&!(toDelete.isEmpty()))
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deleteFileSetRoutine(toDelete,false,ws);
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RegisteredFileSet fs = prepareRegisteredFileSet(doc.getInfo(),doc.getId(), useCaseDescriptor.getId(), request.getAttributes(),files,storage,ws);
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log.debug("Registered Fileset for [ID {} useCaseDescriptor {}] is {} ",fs,doc.getId(),doc.getProfileID());
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docWrapper.putElement(parentMatchingPath,request.getFieldName(),fs);
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break;}
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case MERGE_EXISTING: {
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if(fieldDefinition.isCollection())
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throw new WebApplicationException("Cannot merge repeatable field "+request.getFieldDefinitionPath()+".",Response.Status.BAD_REQUEST);
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RegisteredFileSet original = Serialization.convert(parent.get(request.getFieldName()),RegisteredFileSet.class);
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// MERGE ATTRIBUTES AND PUT
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Document toUseAttributes=request.getAttributes();
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if(original!=null) toUseAttributes.putAll(original);
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RegisteredFileSet fs = prepareRegisteredFileSet(doc.getInfo(),doc.getId(), useCaseDescriptor.getId(), toUseAttributes,files,storage,ws);
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log.debug("Registered Fileset for [ID {} useCaseDescriptor {}] is {} ",fs,doc.getId(),doc.getProfileID());
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docWrapper.putElement(parentMatchingPath,request.getFieldName(),fs);
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break;}
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case APPEND: {
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if(!fieldDefinition.isCollection())
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throw new WebApplicationException("Cannot add to single field "+request.getFieldDefinitionPath()+".",Response.Status.BAD_REQUEST);
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RegisteredFileSet fs = prepareRegisteredFileSet(doc.getInfo(),doc.getId(), useCaseDescriptor.getId(), request.getAttributes(),files,storage,ws);
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log.debug("Registered Fileset for [ID {} useCaseDescriptor {}] is {} ",fs,doc.getId(),doc.getProfileID());
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docWrapper.addElementToArray(String.format("%1ds['%2$s']",parentMatchingPath,request.getFieldName()),fs);
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break;}
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default: {throw new WebApplicationException("Unexpected clash policy "+request.getClashOption(),Response.Status.BAD_REQUEST);}
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}
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log.debug("Setting result on profiled document");
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doc.setTheDocument(Document.parse(docWrapper.getValueCTX().jsonString()));
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doc=onUpdate(doc);
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return convert(replaceDoc(asDocumentWithId(doc),new ObjectId(id)), Project.class);
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}
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@Override
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public Project deleteFileSet(String id, String path, Boolean force) throws ConfigurationException, StorageHubException, JsonProcessingException, DeletionException, EventException {
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log.info("Deleting Fileset for {} [useCaseDescriptor ID {}], at {} [force {} ]",id, useCaseDescriptor.getId(),path,force);
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Project doc = getByID(id);
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doc.getLifecycleInformation().cleanState();
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doc.getLifecycleInformation().cleanState().setLastOperationStatus(LifecycleInformation.Status.OK);
|
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|
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|
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JSONPathWrapper wrapper = new JSONPathWrapper(doc.getTheDocument().toJson());
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List<String> matchingPaths=wrapper.getMatchingPaths(path);
|
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if(matchingPaths.isEmpty()) throw new WebApplicationException("No Registered FileSet found at "+path,Response.Status.BAD_REQUEST);
|
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if(matchingPaths.size()>1) throw new WebApplicationException("Multiple Fileset ("+matchingPaths.size()+") matching "+path,Response.Status.BAD_REQUEST);
|
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RegisteredFileSet fs = Serialization.convert(wrapper.getByPath(path),RegisteredFileSet.class);
|
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log.debug("Going to delete {}",fs);
|
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deleteFileSetRoutine(fs,force,new WorkspaceManager());
|
||
log.debug("Removing FS from document [ID : ] by path {}",id,path);
|
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wrapper.setElement(path,null);
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doc=onUpdate(doc);
|
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return convert(replaceDoc(asDocumentWithId(doc),new ObjectId(id)), Project.class);
|
||
}
|
||
|
||
@Override
|
||
public Configuration getConfiguration() throws ConfigurationException{
|
||
log.debug("Asking configuration for {} in {} ", useCaseDescriptor.getId(), UserUtils.getCurrent().getContext());
|
||
Configuration toReturn= new Configuration();
|
||
List<Archive> archives = new ArrayList<>();
|
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toReturn.setArchives(archives);
|
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List<Index> indexes=new ArrayList<>();
|
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toReturn.setIndexes(indexes);
|
||
// Set Basic Info
|
||
toReturn.setProfileId(this.getUseCaseDescriptor().getId());
|
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toReturn.setContext(ContextUtils.getCurrentScope());
|
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toReturn.setLastUpdatedTime(LocalDateTime.now());
|
||
|
||
// Add Mongo Info
|
||
Archive mongoArchive = new Archive("DOCUMENT-STORE-COLLECTION");
|
||
MongoCollection coll=getCollection();
|
||
mongoArchive.put("count",coll.count());
|
||
mongoArchive.put("collection_name",getToUseCollectionName());
|
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archives.add(mongoArchive);
|
||
|
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// TODO ADD TEXT INDEXES
|
||
|
||
// Set WS Info
|
||
try {
|
||
archives.add(new WorkspaceManager().getConfiguration());
|
||
}catch (Exception e) {
|
||
toReturn.addErrorMessage("Unable to get WS info "+e.getMessage());
|
||
log.error("Unable to get WS Configuration",e);
|
||
}
|
||
|
||
// ADD LC Infos
|
||
|
||
AccountingInfo user = UserUtils.getCurrent().asInfo();
|
||
try{
|
||
Configuration lcConfig = getLCManager().getCurrentConfiguration(new BaseRequest(useCaseDescriptor,user.getUser(),user.getContext()));
|
||
log.info("Configuration is {} ",lcConfig);
|
||
if(lcConfig.getArchives()!=null)
|
||
archives.addAll(lcConfig.getArchives());
|
||
|
||
if(lcConfig.getIndexes()!=null)
|
||
indexes.addAll(lcConfig.getIndexes());
|
||
}catch(ConfigurationException e){
|
||
toReturn.addErrorMessage("Unable to get Lifecycle info "+e.getMessage());
|
||
log.error("Unable to get Lifecycle info ",e);
|
||
}
|
||
|
||
log.debug("Returning current configuration {}",toReturn);
|
||
return toReturn;
|
||
}
|
||
|
||
|
||
private Project step(Project theDocument, String step, Document callParameters){
|
||
try{
|
||
log.info("[UseCaseDescriptor {}] Invoking Step {} on {}" , useCaseDescriptor.getId(),step,getManager().getDescriptor());
|
||
AccountingInfo user= UserUtils.getCurrent().asInfo();
|
||
StepExecutionRequest request=new StepExecutionRequest(useCaseDescriptor,user.getUser(),user.getContext(),theDocument,step);
|
||
|
||
log.debug("Requesting Step Execution {}",request);
|
||
StepExecutionReport report= getManager().performStep(request);
|
||
Project toReturn = report.prepareResult();
|
||
|
||
// EVENTS
|
||
if(report.getToTriggerEvents()!=null) {
|
||
Iterator<EventExecutionRequest> eventIT = report.getToTriggerEvents().listIterator();
|
||
while (!toReturn.getLifecycleInformation().getLastOperationStatus().equals(LifecycleInformation.Status.ERROR)
|
||
&& eventIT.hasNext()) {
|
||
EventExecutionRequest triggerRequest = eventIT.next();
|
||
log.info("Triggering {} ", triggerRequest);
|
||
toReturn = triggerEvent(toReturn, triggerRequest.getEvent(), triggerRequest.getCallParameters());
|
||
}
|
||
}
|
||
|
||
// STEPS
|
||
if(report.getCascadeSteps()!=null) {
|
||
Iterator<StepExecutionRequest> stepIT = report.getCascadeSteps().listIterator();
|
||
while (!toReturn.getLifecycleInformation().getLastOperationStatus().equals(LifecycleInformation.Status.ERROR)
|
||
&& stepIT.hasNext()) {
|
||
StepExecutionRequest triggerRequest = stepIT.next();
|
||
log.info("Triggering {} ", triggerRequest);
|
||
toReturn = step(toReturn, triggerRequest.getStep(), triggerRequest.getCallParameters());
|
||
}
|
||
}
|
||
return report.prepareResult();
|
||
}catch(Throwable t){
|
||
log.error("Unable to perform step "+step,t);
|
||
theDocument.getLifecycleInformation().addErrorMessage("Unable to perform step "+step+" cause : "+ t.getMessage());
|
||
theDocument.getLifecycleInformation().setLastOperationStatus(LifecycleInformation.Status.ERROR);
|
||
return theDocument;
|
||
}
|
||
}
|
||
|
||
private Project triggerEvent(Project theDocument, String event, Document parameters) {
|
||
try{
|
||
log.info("[UseCaseDescriptor {}] triggering event {} on {}" , useCaseDescriptor.getId(),event,getManager().getDescriptor());
|
||
AccountingInfo user= UserUtils.getCurrent().asInfo();
|
||
EventExecutionRequest request= new EventExecutionRequest(useCaseDescriptor,user.getUser(),user.getContext(),theDocument,event);
|
||
log.debug("Triggering {}",request);
|
||
DocumentHandlingReport report = getManager().onEvent(request);
|
||
return report.prepareResult();
|
||
} catch (Throwable t){
|
||
log.error("Unable to trigger event "+event,t);
|
||
theDocument.getLifecycleInformation().addErrorMessage("Unable to trigger "+event+" cause : "+ t.getMessage());
|
||
theDocument.getLifecycleInformation().setLastOperationStatus(LifecycleInformation.Status.ERROR);
|
||
return theDocument;
|
||
}
|
||
}
|
||
|
||
|
||
private static final RegisteredFileSet prepareRegisteredFileSet(PublicationInfo defaultPublicationInfo,String docID, String profileID,
|
||
Document attributes,List<TempFile> files, StorageUtils storage,WorkspaceManager ws) throws StorageHubException, StorageException {
|
||
log.debug("Preparing Registered FileSet..");
|
||
RegisteredFileSet toReturn = new RegisteredFileSet();
|
||
if(attributes!=null) toReturn.putAll(attributes);
|
||
String uuid = UUID.randomUUID().toString();
|
||
toReturn.putIfAbsent(RegisteredFileSet.UUID, uuid);
|
||
toReturn.putIfAbsent(RegisteredFileSet.CREATION_INFO,UserUtils.getCurrent().asInfo());
|
||
toReturn.putIfAbsent(RegisteredFileSet.ACCESS,defaultPublicationInfo.getAccess());
|
||
|
||
// FOLDER
|
||
String folderID=toReturn.getFolderId();
|
||
log.trace("Folder ID is {} ",folderID);
|
||
FolderContainer sectionFolder=null;
|
||
if(folderID==null || folderID.isEmpty()) {
|
||
FolderContainer base = ws.createFolder(new WorkspaceManager.FolderOptions(
|
||
docID, "Base Folder for profiled document. UseCaseDescriptor " + profileID, null));
|
||
sectionFolder = ws.createFolder(new WorkspaceManager.FolderOptions(
|
||
docID + "_" + uuid, "Registered Fileset uuid " + uuid, base));
|
||
toReturn.put(RegisteredFileSet.FOLDER_ID, sectionFolder.getId());
|
||
}else {
|
||
sectionFolder = ws.getFolderById(folderID);
|
||
}
|
||
|
||
ArrayList<RegisteredFile> registeredFiles=new ArrayList<>();
|
||
|
||
if(toReturn.containsKey(RegisteredFileSet.PAYLOADS))
|
||
registeredFiles.addAll(toReturn.getPayloads());
|
||
|
||
for (TempFile f : files) {
|
||
InputStream is=null;
|
||
try{
|
||
log.debug("Opening temp file {}",f);
|
||
String fileUrl=storage.getURL(f.getId());
|
||
log.debug("Got URL {} from ID {}",fileUrl,f.getId());
|
||
is=new URL(fileUrl).openStream();
|
||
RegisteredFile registered=ws.registerFile(new WorkspaceManager.FileOptions(f.getFilename(),is,
|
||
"Imported via gcube CMS service ", sectionFolder));
|
||
log.debug("Registered "+registered);
|
||
registeredFiles.add(registered);
|
||
}catch(StorageHubException | IOException e){
|
||
throw new StorageException("Unable to store "+f,e);
|
||
}finally{
|
||
if(is!=null)
|
||
IOUtils.closeQuietly(is);
|
||
}
|
||
}
|
||
toReturn.put(RegisteredFileSet.PAYLOADS,registeredFiles);
|
||
// TODO MERGE
|
||
//toReturn.remove(RegisteredFileSet.MATERIALIZATIONS);
|
||
return toReturn;
|
||
}
|
||
|
||
|
||
private static void deleteFileSetRoutine(RegisteredFileSet fs, Boolean force, WorkspaceManager ws) throws DeletionException, StorageHubException {
|
||
log.debug("Deleting Registered FS {}");
|
||
if(fs.getMaterializations()!=null && !fs.getMaterializations().isEmpty()){
|
||
if(!force) throw new DeletionException("Fileset (uuid "+fs.getUUID()+") already materialized. Use force = true");
|
||
else throw new RuntimeException("Implement this");
|
||
// TODO manager force deletion
|
||
// NB handlers for materialization types
|
||
}
|
||
log.trace("FileSet ID {} : deleting ws folder {}",fs.getUUID(),fs.getFolderId());
|
||
if(fs.getPayloads()!=null)
|
||
ws.deleteItem(fs.getFolderId());
|
||
}
|
||
|
||
|
||
private static Field getFieldDefinition(UseCaseDescriptor useCaseDescriptor, String fieldPath)throws WebApplicationException{
|
||
JSONPathWrapper schemaWrapper= new JSONPathWrapper(useCaseDescriptor.getSchema().toJson());
|
||
List<Field> fieldDefinitions=schemaWrapper.getByPath(fieldPath,Field.class);
|
||
if(fieldDefinitions==null || fieldDefinitions.isEmpty())
|
||
throw new WebApplicationException("No Field found in schema "+ useCaseDescriptor.getId()+" at "+fieldPath, Response.Status.BAD_REQUEST);
|
||
if(fieldDefinitions.size()>1)
|
||
throw new WebApplicationException("Multiple field definitions ("+fieldDefinitions.size()+") found in "+ useCaseDescriptor.getId()+" for "+fieldPath,Response.Status.BAD_REQUEST);
|
||
Field fieldDefinition=Serialization.convert(fieldDefinitions.get(0),Field.class);
|
||
if(fieldDefinition==null)
|
||
throw new WebApplicationException("Found field is null ["+ useCaseDescriptor.getId()+" for "+fieldPath+"]",Response.Status.BAD_REQUEST);
|
||
log.trace("Field definition is {}",fieldDefinition);
|
||
return fieldDefinition;
|
||
}
|
||
}
|