$ A B C D E F G H I J K L M N O P Q R S T U V W X Y

$

$LandLower - Static variable in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.AquamapsEnvelope

$LandUpper - Static variable in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.AquamapsEnvelope

$ProdLower - Static variable in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.AquamapsEnvelope

$ProdUpper - Static variable in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.AquamapsEnvelope

$SalinBLower - Static variable in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.AquamapsEnvelope

$SalinBUpper - Static variable in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.AquamapsEnvelope

$SalinLower - Static variable in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.AquamapsEnvelope

$SalinUpper - Static variable in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.AquamapsEnvelope

$TempLower - Static variable in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.AquamapsEnvelope

$TempUpper - Static variable in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.AquamapsEnvelope

A

absenceTable - Variable in class org.gcube.dataanalysis.ecoengine.models.ModelAquamapsNN

AccuracyCalc(CategoryGuesser, String, String, String, int, String, String) - Static method in class org.gcube.contentmanagement.lexicalmatcher.analysis.run.CategoryGuesser

AccuracyCalc(LexicalEngineConfiguration, CategoryGuesser, String, String, String, int, String, String) - Static method in class org.gcube.contentmanagement.lexicalmatcher.analysis.run.CategoryGuesser

activityvalue - Variable in class org.gcube.dataanalysis.ecoengine.connectors.RemoteHspecOutputObject.Metric

ActorNode - Class in org.gcube.dataanalysis.ecoengine.interfaces

ActorNode() - Constructor for class org.gcube.dataanalysis.ecoengine.interfaces.ActorNode

add(Integer, Integer, double) - Method in class org.gcube.contentmanagement.graphtools.data.BigSparseTable

add(ColumnType) - Method in class org.gcube.dataanalysis.ecoengine.datatypes.ColumnTypesList

add(PrimitiveType) - Method in class org.gcube.dataanalysis.ecoengine.datatypes.PrimitiveTypesList

add(C) - Method in class org.gcube.dataanalysis.ecoengine.datatypes.StatisticalTypeList

add(InputTable) - Method in class org.gcube.dataanalysis.ecoengine.datatypes.TablesList

addAgent2List(List<ComputationalAgent>, ComputationalAgent) - Static method in class org.gcube.dataanalysis.ecoengine.processing.factories.ProcessorsFactory

addAttribute(String, String) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.Entry

addCategory(Category) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.CategoryOrderedList

AddCDATA(String) - Static method in class org.gcube.contentmanagement.graphtools.utils.HttpRequest

addColumnFilter(String, String, String) - Method in class org.gcube.contentmanagement.graphtools.core.StatisticsGenerator

addColumnFilter(String, String) - Method in class org.gcube.contentmanagement.graphtools.core.StatisticsGenerator

addColumnStatement(String, String, String) - Static method in class org.gcube.dataanalysis.ecoengine.utils.DatabaseUtils

addDefaultDBPars(List<StatisticalType>) - Static method in class org.gcube.dataanalysis.ecoengine.datatypes.DatabaseType

addEdge(V, V) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.graph.CustomListenableDirectedWeightedGraph

addEdge(String, String, double) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.graph.GraphDisplayer

addEntry(ValueEntry<T>) - Method in class org.gcube.portlets.user.timeseries.charts.support.types.Point

addEnvelope(Envelope) - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.EnvelopeSet

addFields(FieldDescr...) - Method in class org.gcube.portlets.user.timeseries.charts.support.tablemodel.TableDescr

addGeneralProperties(HashMap<String, String>) - Method in class org.gcube.dataanalysis.ecoengine.configuration.AlgorithmConfiguration

addGenerator2List(List<ComputationalAgent>, Generator) - Static method in class org.gcube.dataanalysis.ecoengine.processing.factories.GeneratorsFactory

addGraph(String, GraphData) - Method in class org.gcube.portlets.user.timeseries.charts.support.types.GraphGroups

addLabel(int, String) - Method in class org.gcube.contentmanagement.graphtools.abstracts.SamplesTable

addLabel(int, String) - Method in class org.gcube.contentmanagement.graphtools.data.BigSamplesTable

addLabel(int, String) - Method in class org.gcube.contentmanagement.graphtools.data.GraphSamplesTable

addModeler2List(List<ComputationalAgent>, Modeler) - Static method in class org.gcube.dataanalysis.ecoengine.processing.factories.ModelersFactory

addOccurrencePoint(String, OccurrencePoint) - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.OccurrencePointSets

addOccurrencePoint(EnvelopeModel, OccurrencePoint) - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.OccurrencePointSets

addOccurrencePointList(String, List<OccurrencePoint>) - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.OccurrencePointSets

addOccurrencePointList(EnvelopeModel, List<OccurrencePoint>) - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.OccurrencePointSets

addResource(String, double) - Method in class org.gcube.dataanalysis.ecoengine.connectors.livemonitor.Resources

addSample(int, int, double) - Method in class org.gcube.contentmanagement.graphtools.abstracts.SamplesTable

addSample(int, int, double) - Method in class org.gcube.contentmanagement.graphtools.data.BigSamplesTable

addSample(int, int, double) - Method in class org.gcube.contentmanagement.graphtools.data.GraphSamplesTable

addSampleRow(String, double...) - Method in class org.gcube.contentmanagement.graphtools.abstracts.SamplesTable

addSampleRow(String, double...) - Method in class org.gcube.contentmanagement.graphtools.data.BigSamplesTable

addSampleRow(String, double...) - Method in class org.gcube.contentmanagement.graphtools.data.GraphSamplesTable

addType(String, String) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.Entry

addVertex(String) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.graph.GraphDisplayer

addXRangeFilter(String, String) - Method in class org.gcube.contentmanagement.graphtools.core.StatisticsGenerator

addYRangeFilter(String, String) - Method in class org.gcube.contentmanagement.graphtools.core.StatisticsGenerator

aggiornaPesi(float[]) - Method in class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.Neuron

ALG_PROPS - Enum in org.gcube.dataanalysis.ecoengine.configuration

AlgorithmConfiguration - Class in org.gcube.dataanalysis.ecoengine.configuration

AlgorithmConfiguration() - Constructor for class org.gcube.dataanalysis.ecoengine.configuration.AlgorithmConfiguration

algorithmsFile - Static variable in class org.gcube.dataanalysis.ecoengine.configuration.AlgorithmConfiguration

allSpeciesObservations - Variable in class org.gcube.dataanalysis.ecoengine.spatialdistributions.AquamapsSuitable

AnalysisLogger - Class in org.gcube.contentmanagement.lexicalmatcher.utils

AnalysisLogger() - Constructor for class org.gcube.contentmanagement.lexicalmatcher.utils.AnalysisLogger

analyze() - Method in class org.gcube.dataanalysis.ecoengine.evaluation.DiscrepancyAnalysis

analyze() - Method in class org.gcube.dataanalysis.ecoengine.evaluation.DistributionQualityAnalysis

analyze() - Method in class org.gcube.dataanalysis.ecoengine.evaluation.HabitatRepresentativeness

analyze() - Method in class org.gcube.dataanalysis.ecoengine.interfaces.DataAnalysis

analyzeCompareList(List<Object>) - Method in class org.gcube.dataanalysis.ecoengine.evaluation.DiscrepancyAnalysis

analyzedTable - Variable in class org.gcube.dataanalysis.ecoengine.test.TablesComparison

analyzedTable - Variable in class org.gcube.dataanalysis.ecoengine.utils.HspecDiscrepanciesCalculator

analyzedTable - Variable in class org.gcube.dataanalysis.ecoengine.utils.TablesDiscrepanciesCalculator

anotatePoints(GraphGroups, List<Integer>, List<String>) - Static method in class org.gcube.contentmanagement.graphtools.data.conversions.GraphConverter2D

anotateStationaryPoints(GraphGroups) - Static method in class org.gcube.contentmanagement.graphtools.data.conversions.GraphConverter2D

anotateStationaryPoints(GraphGroups, List<String>) - Static method in class org.gcube.contentmanagement.graphtools.data.conversions.GraphConverter2D

AquamapsAlgorithmCore - Class in org.gcube.dataanalysis.ecoengine.spatialdistributions

AquamapsAlgorithmCore() - Constructor for class org.gcube.dataanalysis.ecoengine.spatialdistributions.AquamapsAlgorithmCore

AquamapsEnvelope - Class in org.gcube.dataanalysis.ecoengine.models.cores.aquamaps

AquamapsEnvelope() - Constructor for class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.AquamapsEnvelope

AquamapsEnvelopeAlgorithm - Class in org.gcube.dataanalysis.ecoengine.models.cores.aquamaps

AquamapsEnvelopeAlgorithm() - Constructor for class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.AquamapsEnvelopeAlgorithm

AquamapsNative - Class in org.gcube.dataanalysis.ecoengine.spatialdistributions

AquamapsNative() - Constructor for class org.gcube.dataanalysis.ecoengine.spatialdistributions.AquamapsNative

AquamapsNative2050 - Class in org.gcube.dataanalysis.ecoengine.spatialdistributions

AquamapsNative2050() - Constructor for class org.gcube.dataanalysis.ecoengine.spatialdistributions.AquamapsNative2050

AquamapsNN - Class in org.gcube.dataanalysis.ecoengine.spatialdistributions

AquamapsNN() - Constructor for class org.gcube.dataanalysis.ecoengine.spatialdistributions.AquamapsNN

AquamapsNNNS - Class in org.gcube.dataanalysis.ecoengine.spatialdistributions

AquamapsNNNS() - Constructor for class org.gcube.dataanalysis.ecoengine.spatialdistributions.AquamapsNNNS

AquamapsNNSuitable - Class in org.gcube.dataanalysis.ecoengine.spatialdistributions

AquamapsNNSuitable() - Constructor for class org.gcube.dataanalysis.ecoengine.spatialdistributions.AquamapsNNSuitable

AquamapsSuitable - Class in org.gcube.dataanalysis.ecoengine.spatialdistributions

AquamapsSuitable() - Constructor for class org.gcube.dataanalysis.ecoengine.spatialdistributions.AquamapsSuitable

AquamapsSuitable2050 - Class in org.gcube.dataanalysis.ecoengine.spatialdistributions

AquamapsSuitable2050() - Constructor for class org.gcube.dataanalysis.ecoengine.spatialdistributions.AquamapsSuitable2050

Assertion<T extends Throwable> - Class in org.gcube.portlets.user.timeseries.charts.support.assertions

General purpose assertion handler.

Assertion() - Constructor for class org.gcube.portlets.user.timeseries.charts.support.assertions.Assertion

assignToCenters(KDTree, Instances, int[][], int[], int[], int) - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Assigns instances to centers.

assignToCenters(KDTree, Instances, int[][], int[], int) - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Assign instances to centers using KDtree.

assignToCenters(Instances, int[][], int[], int[]) - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Assign instances to centers.

attivfun - Variable in class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.Neuron

avgValue(String, String) - Method in class org.gcube.dataanalysis.ecoengine.evaluation.bioclimate.BioClimateAnalysis

axonfamily - Variable in class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.neurosolutions.Neuron

axonfuncflatness - Variable in class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.neurosolutions.Neuron

B

BatchTrain(double, Pattern) - Method in class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.neurosolutions.NeuralNet

BatchTrainPatterns(Pattern[], double) - Method in class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.neurosolutions.NeuralNet

BatchUpdateWeights(int) - Method in class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.neurosolutions.Neuron

BayesianDistribution - Class in org.gcube.dataanalysis.ecoengine.spatialdistributions

BayesianDistribution() - Constructor for class org.gcube.dataanalysis.ecoengine.spatialdistributions.BayesianDistribution

BenchMarkTest1 - Class in org.gcube.contentmanagement.lexicalmatcher.analysis.test.old

BenchMarkTest1() - Constructor for class org.gcube.contentmanagement.lexicalmatcher.analysis.test.old.BenchMarkTest1

BenchMarkTest2 - Class in org.gcube.contentmanagement.lexicalmatcher.analysis.test.old

BenchMarkTest2() - Constructor for class org.gcube.contentmanagement.lexicalmatcher.analysis.test.old.BenchMarkTest2

BenchMarkTest3 - Class in org.gcube.contentmanagement.lexicalmatcher.analysis.test.old

BenchMarkTest3() - Constructor for class org.gcube.contentmanagement.lexicalmatcher.analysis.test.old.BenchMarkTest3

BenchMarkTest4 - Class in org.gcube.contentmanagement.lexicalmatcher.analysis.test.old

BenchMarkTest4() - Constructor for class org.gcube.contentmanagement.lexicalmatcher.analysis.test.old.BenchMarkTest4

BenchMarkTest5 - Class in org.gcube.contentmanagement.lexicalmatcher.analysis.test.old

BenchMarkTest5() - Constructor for class org.gcube.contentmanagement.lexicalmatcher.analysis.test.old.BenchMarkTest5

BenchMarkTestExternalCfg - Class in org.gcube.contentmanagement.lexicalmatcher.analysis.test.old

BenchMarkTestExternalCfg() - Constructor for class org.gcube.contentmanagement.lexicalmatcher.analysis.test.old.BenchMarkTestExternalCfg

BenchMarkTestFilterCategory - Class in org.gcube.contentmanagement.lexicalmatcher.analysis.test.old

BenchMarkTestFilterCategory() - Constructor for class org.gcube.contentmanagement.lexicalmatcher.analysis.test.old.BenchMarkTestFilterCategory

BenchMarkTestSingleton - Class in org.gcube.contentmanagement.lexicalmatcher.analysis.test.old

BenchMarkTestSingleton() - Constructor for class org.gcube.contentmanagement.lexicalmatcher.analysis.test.old.BenchMarkTestSingleton

BenchMarkTestTSCountry - Class in org.gcube.contentmanagement.lexicalmatcher.analysis.test.old

BenchMarkTestTSCountry() - Constructor for class org.gcube.contentmanagement.lexicalmatcher.analysis.test.old.BenchMarkTestTSCountry

BenchMarkTrainingSet - Class in org.gcube.contentmanagement.lexicalmatcher.analysis.test.old

BenchMarkTrainingSet() - Constructor for class org.gcube.contentmanagement.lexicalmatcher.analysis.test.old.BenchMarkTrainingSet

BenchMarkTrainingSetScientificName - Class in org.gcube.contentmanagement.lexicalmatcher.analysis.test.old

BenchMarkTrainingSetScientificName() - Constructor for class org.gcube.contentmanagement.lexicalmatcher.analysis.test.old.BenchMarkTrainingSetScientificName

bestCategories - Variable in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.Engine

bestColumns - Variable in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.Engine

bestScores - Variable in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.Engine

big - Variable in class org.gcube.contentmanagement.graphtools.abstracts.GenericStandaloneGraph

BigSamplesTable - Class in org.gcube.contentmanagement.graphtools.data

BigSamplesTable() - Constructor for class org.gcube.contentmanagement.graphtools.data.BigSamplesTable

BigSparseTable - Class in org.gcube.contentmanagement.graphtools.data

BigSparseTable() - Constructor for class org.gcube.contentmanagement.graphtools.data.BigSparseTable

binValueTipText() - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Returns the tip text for this property.

bioClimate - Variable in class org.gcube.dataanalysis.ecoengine.transducers.BioClimateHSPECTransducer

BioClimateAnalysis - Class in org.gcube.dataanalysis.ecoengine.evaluation.bioclimate

BioClimateAnalysis(String, String, String, String, String, boolean) - Constructor for class org.gcube.dataanalysis.ecoengine.evaluation.bioclimate.BioClimateAnalysis

BioClimateGraph - Class in org.gcube.dataanalysis.ecoengine.evaluation.bioclimate

BioClimateGraph(String, double, double) - Constructor for class org.gcube.dataanalysis.ecoengine.evaluation.bioclimate.BioClimateGraph

BioClimateHCAFTransducer - Class in org.gcube.dataanalysis.ecoengine.transducers

BioClimateHCAFTransducer() - Constructor for class org.gcube.dataanalysis.ecoengine.transducers.BioClimateHCAFTransducer

BioClimateHSPECTransducer - Class in org.gcube.dataanalysis.ecoengine.transducers

BioClimateHSPECTransducer() - Constructor for class org.gcube.dataanalysis.ecoengine.transducers.BioClimateHSPECTransducer

BioClimateHSPENTransducer - Class in org.gcube.dataanalysis.ecoengine.transducers

BioClimateHSPENTransducer() - Constructor for class org.gcube.dataanalysis.ecoengine.transducers.BioClimateHSPENTransducer

buildCategories(SessionFactory, String, String, String, String, String) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.DBObjectTranslator

buildCategoriesStructure(SessionFactory, String, String, String, String, String) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.DBObjectTranslator

buildClusterer(Instances) - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Generates the X-Means clusterer.

BuildClusterTable(IOObject[]) - Method in class org.gcube.dataanalysis.ecoengine.clustering.DBScan

BuildClusterTable(int[], int[]) - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeansWrapper

buildCreateStatement(String, String) - Method in class org.gcube.dataanalysis.ecoengine.utils.DatabaseUtils

buildDestinationTable(String) - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.MaxMinGenerator

buildLocalResourcesLog(int) - Static method in class org.gcube.dataanalysis.ecoengine.connectors.livemonitor.Resources

buildRelationsEdges(SessionFactory) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.DBObjectTranslator

buildWholeStructure(SessionFactory, String, String, String, String, String) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.DBObjectTranslator

C

calcDiscrepancy(String, String, String, String, String, String, float) - Method in class org.gcube.dataanalysis.ecoengine.evaluation.bioclimate.BioClimateAnalysis

calcdiscrepancy(String, String) - Static method in class org.gcube.dataanalysis.ecoengine.test.experiments.latimeria.ExperimentsForLatimeria

calcEnv(String, Object[], List<Object>, List<Object>, List<Object>, List<Object>, List<Object>) - Static method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.AquamapsEnvelopeAlgorithm

calcEnvelope(List<Object>) - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.SpEnv_landdist

calcEnvelope(List<Object>) - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.SpEnv_primprod

calcEnvelope(List<Object>, String) - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.SpEnv_salinity

calcEnvelope(List<Object>) - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.SpEnv_seaice

calcEnvelope(String, List<Object>) - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.SpEnv_temp

calcEnvelopes(String) - Method in class org.gcube.dataanalysis.ecoengine.models.ModelHSPEN

calcFilePrefix(String) - Static method in class org.gcube.dataanalysis.ecoengine.utils.Sha1

calcFrequencies(double[], double[]) - Static method in class org.gcube.dataanalysis.ecoengine.utils.Operations

calcFrequenciesDistributionsForComponents(double[][]) - Method in class org.gcube.dataanalysis.ecoengine.evaluation.HabitatRepresentativeness

calcHighProbabilityCells(String, double) - Method in class org.gcube.dataanalysis.ecoengine.evaluation.bioclimate.BioClimateAnalysis

calcHRS(String, String, String) - Static method in class org.gcube.dataanalysis.ecoengine.test.experiments.latimeria.ExperimentsForLatimeria

calcLike(CategoryOrderedList, String, String) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.Engine

calcLikeThread(CategoryOrderedList, String, String, String) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.Engine

calcNumOfRepresentativeElements(int, int) - Static method in class org.gcube.dataanalysis.ecoengine.utils.Operations

calcOverDiscrepancy(String, String, String, String, String, String, float) - Method in class org.gcube.dataanalysis.ecoengine.evaluation.bioclimate.BioClimateAnalysis

calcPCA(double[][]) - Method in class org.gcube.dataanalysis.ecoengine.models.cores.pca.PrincipalComponentAnalysis

calcProb(Object, Object) - Method in interface org.gcube.dataanalysis.ecoengine.interfaces.SpatialProbabilityDistributionGeneric

calcProb(Object, Object) - Method in interface org.gcube.dataanalysis.ecoengine.interfaces.SpatialProbabilityDistributionTable

calcProb(String, int, double, double, double, String, String, String, String, String, String, String, double, double, String, String, String, String, double, double, String, String, String, String, double, String, String, String, String, String, String, String, String, String, double, String, String, String, String) - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.AquamapsAlgorithmCore

calcProb(Object, Object) - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.AquamapsNN

calcProb(Object, Object) - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.AquamapsNNNS

calcProb(Object, Object) - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.AquamapsNNSuitable

calcProb(Object, Object) - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.AquamapsSuitable

calcProb(Object, Object) - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.DummyAlgorithm

calcProb(Object, Object) - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.FeedForwardNeuralNetworkDistribution

calcProb(Object, Object) - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.TestAlgorithm

calcquality(String, String, String) - Static method in class org.gcube.dataanalysis.ecoengine.test.experiments.latimeria.ExperimentsForLatimeria

calculateAccuracy(int, int, int, int) - Method in class org.gcube.dataanalysis.ecoengine.evaluation.DistributionQualityAnalysis

calculateAUC(double[], double[], boolean) - Method in class org.gcube.dataanalysis.ecoengine.evaluation.DistributionQualityAnalysis

calculateBIC(int[], Instance, double, Instances) - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Returns the BIC-value for the given center and instances.

calculateBIC(int[][], Instances, double[]) - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Calculates the BIC for the given set of centers and instances.

calculateBoundingBox(String, String, String, String, String, String, String, String, String, String, String, String, String, String) - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.AquamapsAlgorithmCore

calculateBoundingBox(Object[]) - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.AquamapsSuitable

calculateBounds() - Method in class org.gcube.contentmanagement.graphtools.abstracts.SamplesTable

calculateCategoriesWeights(SessionFactory) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.DBObjectTranslator

calculateCoverage() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.CategoryScores

calculateDigestMD5(String) - Static method in class org.gcube.dataanalysis.ecoengine.utils.Sha1

calculateEnvelopes(String, Object[], OccurrencePointSets) - Static method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.AquamapsEnvelopeAlgorithm

calculateEnvelopes(String, SessionFactory, String, String, Object[]) - Static method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.AquamapsEnvelopeAlgorithm

calculateLabelLocation(Rectangle2D, double, Rectangle2D, double) - Method in class org.gcube.contentmanagement.graphtools.plotting.demo.SpiderWebPlot

Returns the location for a label

calculateNumberOfCycles() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.chunks.ChunkSet

calculateNumberOfElements() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.chunks.ChunkSet

calculateNumberOfElements() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.chunks.ReferenceChunkSet

calculateNumberOfElements() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.chunks.SingletonChunkSet

calculateNumberOfElements() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.chunks.TimeSeriesChunkSet

calculateOmissionRate(int, int) - Method in class org.gcube.dataanalysis.ecoengine.evaluation.DistributionQualityAnalysis

calculatePercentiles(List<Object>, Double, Double) - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.AquamapsEnvelope

calculateRelationWeights(SessionFactory) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.DBObjectTranslator

calculateSensitivity(int, int) - Method in class org.gcube.dataanalysis.ecoengine.evaluation.DistributionQualityAnalysis

calculateSpecificity(int, int) - Method in class org.gcube.dataanalysis.ecoengine.evaluation.DistributionQualityAnalysis

calculateTotalEntries(SessionFactory, String, String) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.DBObjectTranslator

categories - Variable in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.DBObjectTranslator

Category - Class in org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data

Category(String, String, String, String) - Constructor for class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.Category

categoryDiscardDifferencialThreshold - Variable in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.LexicalEngineConfiguration

categoryDiscardThreshold - Variable in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.LexicalEngineConfiguration

CategoryGuesser - Class in org.gcube.contentmanagement.lexicalmatcher.analysis.run

CategoryGuesser(String) - Constructor for class org.gcube.contentmanagement.lexicalmatcher.analysis.run.CategoryGuesser

CategoryGuesser() - Constructor for class org.gcube.contentmanagement.lexicalmatcher.analysis.run.CategoryGuesser

CategoryOrderedList - Class in org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data

CategoryOrderedList(LexicalEngineConfiguration) - Constructor for class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.CategoryOrderedList

CategoryScores - Class in org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data

CategoryScores(BigInteger, LexicalEngineConfiguration) - Constructor for class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.CategoryScores

CategoryScoresOld - Class in org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data

CategoryScoresOld(BigInteger) - Constructor for class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.CategoryScoresOld

CD(boolean, String, String) - Method in class org.gcube.contentmanagement.lexicalmatcher.utils.DistanceCalculator

CD(boolean, String, String, boolean, boolean) - Method in class org.gcube.contentmanagement.lexicalmatcher.utils.DistanceCalculator

checkAllElements() - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.MaxMinGenerator

CheckCompleteResult(String, String, String) - Static method in class org.gcube.contentmanagement.lexicalmatcher.analysis.run.CategoryGuesser

CheckFamilyResult(String, String) - Static method in class org.gcube.contentmanagement.lexicalmatcher.analysis.run.CategoryGuesser

checkForNominalAttributes(Instances) - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Checks for nominal attributes in the dataset.

checkInput(String) - Static method in class org.gcube.contentmanagement.lexicalmatcher.utils.FileTools

checkInstances() - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Checks the instances.

checkOutput(String, boolean) - Static method in class org.gcube.contentmanagement.lexicalmatcher.utils.FileTools

checkPrevious(Double, Double, Double, Double) - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.AquamapsEnvelope

checkUrl(String, String, String) - Static method in class org.gcube.contentmanagement.graphtools.utils.HttpRequest

Chunk - Class in org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.chunks

Chunk(Engine) - Constructor for class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.chunks.Chunk

chunk2Index(int, int) - Static method in class org.gcube.contentmanagement.graphtools.utils.MathFunctions

chunk2Index(int, int) - Static method in class org.gcube.contentmanagement.lexicalmatcher.utils.MathFunctions

chunkIndex - Variable in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.chunks.ChunkSet

chunkize(int, int) - Static method in class org.gcube.dataanalysis.ecoengine.utils.Operations

ChunkSet - Class in org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.chunks

ChunkSet(int, int, String, String, LexicalEngineConfiguration, Engine) - Constructor for class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.chunks.ChunkSet

ChunkSet(int, int, String, String, BigInteger, LexicalEngineConfiguration, Engine) - Constructor for class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.chunks.ChunkSet

chunkSetSize - Variable in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.chunks.ChunkSet

chunkSize - Variable in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.LexicalEngineConfiguration

chunkSize - Variable in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.chunks.ChunkSet

chunkSize - Static variable in class org.gcube.dataanalysis.ecoengine.configuration.AlgorithmConfiguration

chunksize - Variable in class org.gcube.dataanalysis.ecoengine.processing.LocalSimpleSplitGenerator

className - Variable in class org.gcube.dataanalysis.ecoengine.datatypes.PrimitiveType

clone() - Method in class org.gcube.contentmanagement.graphtools.plotting.demo.SpiderWebPlot

Returns a clone of this plot.

closeDBConnection(SessionFactory) - Static method in class org.gcube.dataanalysis.ecoengine.utils.DatabaseUtils

clusterColumn - Static variable in class org.gcube.dataanalysis.ecoengine.clustering.DBScan

clusterColumnType - Static variable in class org.gcube.dataanalysis.ecoengine.clustering.DBScan

Clusterer - Interface in org.gcube.dataanalysis.ecoengine.interfaces

ClusterersFactory - Class in org.gcube.dataanalysis.ecoengine.processing.factories

ClusterersFactory() - Constructor for class org.gcube.dataanalysis.ecoengine.processing.factories.ClusterersFactory

clusterersFile - Static variable in class org.gcube.dataanalysis.ecoengine.configuration.AlgorithmConfiguration

clusterInstance(Instance) - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Classifies a given instance.

clusterProcessedInstance(Instance, Instances) - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Clusters an instance.

clusterProcessedInstance(Instance) - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Clusters an instance that has been through the filters.

columnFilter - Variable in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.Engine

columns - Variable in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsMerger

columns - Variable in class org.gcube.dataanalysis.ecoengine.utils.DatabaseUtils

columnsNames - Variable in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsMerger

ColumnType - Class in org.gcube.dataanalysis.ecoengine.datatypes

ColumnType(String, String, String, String, boolean) - Constructor for class org.gcube.dataanalysis.ecoengine.datatypes.ColumnType

ColumnTypesList - Class in org.gcube.dataanalysis.ecoengine.datatypes

ColumnTypesList(String, String, String, boolean) - Constructor for class org.gcube.dataanalysis.ecoengine.datatypes.ColumnTypesList

CommonDBExtractor - Class in org.gcube.contentmanagement.graphtools.data.databases

CommonDBExtractor(SessionFactory) - Constructor for class org.gcube.contentmanagement.graphtools.data.databases.CommonDBExtractor

compareToReferenceChunk(HashMap<String, CategoryScores>, ReferenceChunk) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.chunks.TimeSeriesChunk

compareToReferenceChunk(HashMap<String, CategoryScores>, ReferenceChunk, String) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.chunks.TimeSeriesChunk

completeDistribution - Variable in class org.gcube.dataanalysis.ecoengine.processing.LocalSimpleSplitGenerator

completion - Variable in class org.gcube.dataanalysis.ecoengine.connectors.RemoteHspecOutputObject

ComputationalAgent - Interface in org.gcube.dataanalysis.ecoengine.interfaces

compute() - Method in class org.gcube.dataanalysis.ecoengine.clustering.DBScan

compute() - Method in class org.gcube.dataanalysis.ecoengine.clustering.KMeans

compute() - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeansWrapper

compute() - Method in interface org.gcube.dataanalysis.ecoengine.interfaces.ComputationalAgent

compute() - Method in class org.gcube.dataanalysis.ecoengine.interfaces.DataAnalysis

compute() - Method in class org.gcube.dataanalysis.ecoengine.modeling.SimpleModeler

compute() - Method in class org.gcube.dataanalysis.ecoengine.processing.LocalSimpleSplitGenerator

compute() - Method in class org.gcube.dataanalysis.ecoengine.processing.LocalSplitGenerator

compute() - Method in class org.gcube.dataanalysis.ecoengine.transducers.BioClimateHCAFTransducer

compute() - Method in class org.gcube.dataanalysis.ecoengine.transducers.BioClimateHSPECTransducer

compute() - Method in class org.gcube.dataanalysis.ecoengine.transducers.BioClimateHSPENTransducer

compute() - Method in class org.gcube.dataanalysis.ecoengine.transducers.InterpolationTransducer

compute() - Method in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsInSeaOnEarth

compute() - Method in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsMerger

compute() - Method in class org.gcube.dataanalysis.ecoengine.transducers.QueryExecutor

compute() - Method in class org.gcube.dataanalysis.ecoengine.transducers.TestTrans

computeOLD() - Method in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsDuplicatesDeleter

computeRange() - Method in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsDuplicatesDeleter

computeRange() - Method in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsMerger

confidence - Static variable in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsMerger

confidenceValue - Variable in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsMerger

config - Variable in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.chunks.ChunkSet

config - Variable in class org.gcube.dataanalysis.ecoengine.clustering.DBScan

config - Variable in class org.gcube.dataanalysis.ecoengine.interfaces.DataAnalysis

config - Variable in class org.gcube.dataanalysis.ecoengine.processing.LocalSimpleSplitGenerator

config - Variable in class org.gcube.dataanalysis.ecoengine.spatialdistributions.BayesianDistribution

config - Variable in class org.gcube.dataanalysis.ecoengine.transducers.BioClimateHSPECTransducer

config - Variable in class org.gcube.dataanalysis.ecoengine.transducers.InterpolationTransducer

config - Variable in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsMerger

config - Variable in class org.gcube.dataanalysis.ecoengine.transducers.QueryExecutor

configAbsenceTable(boolean, String, String, int, String) - Static method in class org.gcube.dataanalysis.ecoengine.utils.PresetConfigGenerator

configAquamapsNative(String, String) - Static method in class org.gcube.dataanalysis.ecoengine.utils.PresetConfigGenerator

configAquamapsNNNative(String, String, String, String, String) - Static method in class org.gcube.dataanalysis.ecoengine.utils.PresetConfigGenerator

configAquamapsNNSuitable(String, String, String, String, String) - Static method in class org.gcube.dataanalysis.ecoengine.utils.PresetConfigGenerator

configAquamapsSuitable(String, String) - Static method in class org.gcube.dataanalysis.ecoengine.utils.PresetConfigGenerator

configDiscrepancyAnalysis(String, String) - Static method in class org.gcube.dataanalysis.ecoengine.utils.PresetConfigGenerator

configHCAFfilter(String, float, float, float, float) - Static method in class org.gcube.dataanalysis.ecoengine.utils.PresetConfigGenerator

configHRSAnalysis(String, String, String) - Static method in class org.gcube.dataanalysis.ecoengine.utils.PresetConfigGenerator

configHSPENfilter(String, String) - Static method in class org.gcube.dataanalysis.ecoengine.utils.PresetConfigGenerator

configNativeNeuralNetworkTraining(String, String, String, String, String, String) - Static method in class org.gcube.dataanalysis.ecoengine.utils.PresetConfigGenerator

configPresenceTable(String, int, String) - Static method in class org.gcube.dataanalysis.ecoengine.utils.PresetConfigGenerator

configQualityAnalysis(String, String, String) - Static method in class org.gcube.dataanalysis.ecoengine.utils.PresetConfigGenerator

configSuitableNeuralNetworkTraining(String, String, String, String, String, String) - Static method in class org.gcube.dataanalysis.ecoengine.utils.PresetConfigGenerator

configuration - Variable in class org.gcube.dataanalysis.ecoengine.connectors.RemoteHspecInputObject

configure(String) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.EngineConfiguration

configure(String) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.LexicalEngineConfiguration

connection - Variable in class org.gcube.dataanalysis.ecoengine.interfaces.DataAnalysis

connection - Variable in class org.gcube.dataanalysis.ecoengine.models.ModelAquamapsNN

connection - Variable in class org.gcube.dataanalysis.ecoengine.models.ModelHSPEN

content - Variable in class org.gcube.dataanalysis.ecoengine.datatypes.PrimitiveType

convert(SamplesTable) - Static method in class org.gcube.contentmanagement.graphtools.data.conversions.GraphConverter2D

convert2conventionalFormat(Calendar) - Static method in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsMerger

convert2Dataset(GraphData) - Method in class org.gcube.contentmanagement.graphtools.abstracts.GenericStandaloneGraph

convert2Dataset(GraphData) - Method in class org.gcube.contentmanagement.graphtools.plotting.graphs.GaussianDistributionGraph

convert2Dataset(GraphData) - Method in class org.gcube.contentmanagement.graphtools.plotting.graphs.NumericSeriesGraph

convert2Dataset(GraphData) - Method in class org.gcube.contentmanagement.graphtools.plotting.graphs.ScatterGraphNumeric

convert2Dataset(GraphData) - Method in class org.gcube.contentmanagement.graphtools.plotting.graphs.TimeSeriesGraph

convert2DatasetOld(GraphData) - Method in class org.gcube.contentmanagement.graphtools.plotting.graphs.PieGraph

convertDate(String) - Static method in class org.gcube.contentmanagement.graphtools.utils.DateGuesser

convertDate(String, String) - Static method in class org.gcube.contentmanagement.graphtools.utils.DateGuesser

Coordinates - Class in org.gcube.dataanalysis.ecoengine.models.cores.aquamaps

Coordinates(String, String, String, String, String, String) - Constructor for class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.Coordinates

copyFileToTableStatement(String, String) - Static method in class org.gcube.dataanalysis.ecoengine.utils.DatabaseUtils

countElements(String, SessionFactory) - Method in class org.gcube.dataanalysis.ecoengine.test.TablesComparison

countElements(String, SessionFactory) - Method in class org.gcube.dataanalysis.ecoengine.utils.HspecDiscrepanciesCalculator

countElements(String, SessionFactory) - Method in class org.gcube.dataanalysis.ecoengine.utils.TablesDiscrepanciesCalculator

countElementsStatement(String) - Static method in class org.gcube.dataanalysis.ecoengine.utils.DatabaseUtils

countIceLeakageCells(String, String) - Method in class org.gcube.dataanalysis.ecoengine.evaluation.bioclimate.BioClimateAnalysis

countSeaCells(String, String, double) - Method in class org.gcube.dataanalysis.ecoengine.evaluation.bioclimate.BioClimateAnalysis

createBigTable(boolean, String, String, String, String, String, String, SessionFactory) - Static method in class org.gcube.dataanalysis.ecoengine.utils.DatabaseUtils

createBlankTableFromAnotherStatement(String, String) - Static method in class org.gcube.dataanalysis.ecoengine.utils.DatabaseUtils

createChart(Dataset) - Method in class org.gcube.contentmanagement.graphtools.abstracts.GenericStandaloneGraph

createChart(Dataset) - Method in class org.gcube.contentmanagement.graphtools.plotting.graphs.GaussianDistributionGraph

createChart(Dataset) - Method in class org.gcube.contentmanagement.graphtools.plotting.graphs.HistogramGraph

createChart(Dataset) - Method in class org.gcube.contentmanagement.graphtools.plotting.graphs.LineGraph

createChart(Dataset) - Method in class org.gcube.contentmanagement.graphtools.plotting.graphs.NumericSeriesGraph

createChart(Dataset) - Method in class org.gcube.contentmanagement.graphtools.plotting.graphs.PieGraph

createChart(Dataset) - Method in class org.gcube.contentmanagement.graphtools.plotting.graphs.RadarGraph

createChart(Dataset) - Method in class org.gcube.contentmanagement.graphtools.plotting.graphs.ScatterGraphGeneric

createChart(Dataset) - Method in class org.gcube.contentmanagement.graphtools.plotting.graphs.ScatterGraphNumeric

createChart(Dataset) - Method in class org.gcube.contentmanagement.graphtools.plotting.graphs.TimeSeriesGraph

createChart(Dataset) - Method in class org.gcube.contentmanagement.graphtools.plotting.graphs.TransectLineGraph

createChart(Dataset) - Method in class org.gcube.dataanalysis.ecoengine.evaluation.bioclimate.BioClimateGraph

createDemoPanel() - Static method in class org.gcube.contentmanagement.graphtools.plotting.demo.PieChartDemo1

Creates a panel for the demo (used by SuperDemo.java).

createDemoPanel() - Static method in class org.gcube.contentmanagement.graphtools.plotting.demo.SpiderWebDemo1

Creates a panel for the demo (used by SuperDemo.java).

createDemoPanel() - Static method in class org.gcube.contentmanagement.graphtools.plotting.demo.TimeSeriesChartDemo1

Creates a panel for the demo (used by SuperDemo.java).

createInput() - Static method in class org.gcube.contentmanagement.graphtools.tests.old.ExampleRMUsage

createProcess() - Static method in class org.gcube.contentmanagement.graphtools.tests.old.ExampleRMUsage

createRemoteTableFromFile(String, String, String, boolean, String, String, String) - Static method in class org.gcube.dataanalysis.ecoengine.utils.DatabaseUtils

createStaticChart(Dataset, double, double, String) - Static method in class org.gcube.dataanalysis.ecoengine.evaluation.bioclimate.BioClimateGraph

createTable() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.EngineConfiguration

createUpdateStatement(String, String, String, String, String, String) - Static method in class org.gcube.dataanalysis.ecoengine.utils.DatabaseUtils

CrossValErrorRatio(PatternSet) - Method in class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.neurosolutions.NeuralNet

cumulthresholddiff - Variable in class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.neurosolutions.Neuron

cumulweightdiff - Variable in class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.neurosolutions.Synapse

currentFAOAreas - Variable in class org.gcube.dataanalysis.ecoengine.spatialdistributions.AquamapsSuitable

currentSpeciesBoundingBoxInfo - Variable in class org.gcube.dataanalysis.ecoengine.spatialdistributions.AquamapsSuitable

CustomListenableDirectedWeightedGraph<V,E> - Class in org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.graph

CustomListenableDirectedWeightedGraph(Class) - Constructor for class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.graph.CustomListenableDirectedWeightedGraph

CustomWeightedEdge - Class in org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.graph

CustomWeightedEdge() - Constructor for class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.graph.CustomWeightedEdge

CustomWeightedVertex - Class in org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.graph

CustomWeightedVertex(String, double) - Constructor for class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.graph.CustomWeightedVertex

CustomWeightedVertex(String) - Constructor for class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.graph.CustomWeightedVertex

cutOffFactorTipText() - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Returns the tip text for this property.

D

D_CONVCHCLOSER - Static variable in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

have a closer look at converge children.

D_CURR - Static variable in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

for current debug.

D_FOLLOWSPLIT - Static variable in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

follows the splitting of the centers.

D_GENERAL - Static variable in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

general debugging.

D_ITERCOUNT - Static variable in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

follow iterations.

D_KDTREE - Static variable in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

check on kdtree.

D_METH_MISUSE - Static variable in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

functions were maybe misused.

D_PRINTCENTERS - Static variable in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

print the centers.

D_RANDOMVECTOR - Static variable in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

check on random vectors.

DataAnalysis - Class in org.gcube.dataanalysis.ecoengine.interfaces

Implements a mono-thread data analysis process Status is managed outside the class and analysis is simply conducted by initializing and applying procedure

DataAnalysis() - Constructor for class org.gcube.dataanalysis.ecoengine.interfaces.DataAnalysis

databaseAutomaticTestTable - Variable in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.LexicalEngineConfiguration

databaseDialect - Variable in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.LexicalEngineConfiguration

databaseDriver - Variable in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.LexicalEngineConfiguration

DatabaseFactory - Class in org.gcube.contentmanagement.lexicalmatcher.utils

DatabaseFactory() - Constructor for class org.gcube.contentmanagement.lexicalmatcher.utils.DatabaseFactory

DatabaseFactory - Class in org.gcube.dataanalysis.ecoengine.utils

DatabaseFactory() - Constructor for class org.gcube.dataanalysis.ecoengine.utils.DatabaseFactory

databaseIdleConnectionTestPeriod - Variable in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.LexicalEngineConfiguration

databaseParameter - Variable in class org.gcube.dataanalysis.ecoengine.datatypes.DatabaseType

DatabaseParameters - Enum in org.gcube.dataanalysis.ecoengine.datatypes.enumtypes

databasePassword - Variable in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.LexicalEngineConfiguration

DatabaseType - Class in org.gcube.dataanalysis.ecoengine.datatypes

DatabaseType(DatabaseParameters, String, String, String, boolean) - Constructor for class org.gcube.dataanalysis.ecoengine.datatypes.DatabaseType

DatabaseType(DatabaseParameters, String, String, String) - Constructor for class org.gcube.dataanalysis.ecoengine.datatypes.DatabaseType

DatabaseType(DatabaseParameters, String, String) - Constructor for class org.gcube.dataanalysis.ecoengine.datatypes.DatabaseType

databaseURL - Variable in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.LexicalEngineConfiguration

databaseUserName - Variable in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.LexicalEngineConfiguration

DatabaseUtils - Class in org.gcube.dataanalysis.ecoengine.utils

DatabaseUtils(SessionFactory) - Constructor for class org.gcube.dataanalysis.ecoengine.utils.DatabaseUtils

DataTypeRecognizer - Class in org.gcube.contentmanagement.lexicalmatcher.analysis.core

DataTypeRecognizer() - Constructor for class org.gcube.contentmanagement.lexicalmatcher.analysis.core.DataTypeRecognizer

DateGuesser - Class in org.gcube.contentmanagement.graphtools.utils

DateGuesser() - Constructor for class org.gcube.contentmanagement.graphtools.utils.DateGuesser

DAY - Static variable in class org.gcube.contentmanagement.graphtools.utils.DateGuesser

dbcolumns - Variable in class org.gcube.dataanalysis.ecoengine.models.FeedForwardNN

dbcolumns - Variable in class org.gcube.dataanalysis.ecoengine.models.testing.FeedForwardNNFile

dbcolumnsList - Variable in class org.gcube.dataanalysis.ecoengine.models.FeedForwardNN

dbcolumnsList - Variable in class org.gcube.dataanalysis.ecoengine.models.testing.FeedForwardNNFile

dbConnection - Variable in class org.gcube.dataanalysis.ecoengine.spatialdistributions.BayesianDistribution

dbconnection - Variable in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsMerger

dbHibConnection - Variable in class org.gcube.dataanalysis.ecoengine.clustering.DBScan

DBObjectTranslator - Class in org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data

DBObjectTranslator() - Constructor for class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.DBObjectTranslator

DBScan - Class in org.gcube.dataanalysis.ecoengine.clustering

DBScan() - Constructor for class org.gcube.dataanalysis.ecoengine.clustering.DBScan

debugLevelTipText() - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Returns the tip text for this property.

debugVectorsFileTipText() - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Returns the tip text for this property.

DEFAULT_AXIS_LABEL_GAP - Static variable in class org.gcube.contentmanagement.graphtools.plotting.demo.SpiderWebPlot

The default axis label gap (currently 10%).

DEFAULT_HEAD - Static variable in class org.gcube.contentmanagement.graphtools.plotting.demo.SpiderWebPlot

The default head radius percent (currently 1%).

DEFAULT_INTERIOR_GAP - Static variable in class org.gcube.contentmanagement.graphtools.plotting.demo.SpiderWebPlot

The default interior gap.

DEFAULT_LABEL_BACKGROUND_PAINT - Static variable in class org.gcube.contentmanagement.graphtools.plotting.demo.SpiderWebPlot

The default series label background paint.

DEFAULT_LABEL_FONT - Static variable in class org.gcube.contentmanagement.graphtools.plotting.demo.SpiderWebPlot

The default series label font.

DEFAULT_LABEL_OUTLINE_PAINT - Static variable in class org.gcube.contentmanagement.graphtools.plotting.demo.SpiderWebPlot

The default series label outline paint.

DEFAULT_LABEL_OUTLINE_STROKE - Static variable in class org.gcube.contentmanagement.graphtools.plotting.demo.SpiderWebPlot

The default series label outline stroke.

DEFAULT_LABEL_PAINT - Static variable in class org.gcube.contentmanagement.graphtools.plotting.demo.SpiderWebPlot

The default series label paint.

DEFAULT_LABEL_SHADOW_PAINT - Static variable in class org.gcube.contentmanagement.graphtools.plotting.demo.SpiderWebPlot

The default series label shadow paint.

DEFAULT_MAX_VALUE - Static variable in class org.gcube.contentmanagement.graphtools.plotting.demo.SpiderWebPlot

The default maximum value plotted - forces the plot to evaluate the maximum from the data passed in

DEFAULT_START_ANGLE - Static variable in class org.gcube.contentmanagement.graphtools.plotting.demo.SpiderWebPlot

The default starting angle for the radar chart axes.

defaultConnectionFile - Static variable in class org.gcube.dataanalysis.ecoengine.configuration.AlgorithmConfiguration

defaultLoggerFile - Static variable in class org.gcube.dataanalysis.ecoengine.configuration.AlgorithmConfiguration

defaultResourceLoad() - Static method in class org.gcube.dataanalysis.ecoengine.connectors.livemonitor.ResourceLoad

defaultValue - Variable in class org.gcube.dataanalysis.ecoengine.datatypes.StatisticalType

deleteDestinationTable(String) - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.MaxMinGenerator

deleteFromBuffer(String, StringBuffer) - Static method in class org.gcube.dataanalysis.ecoengine.utils.DatabaseUtils

deleteHeaders(List<Point<? extends Number, ? extends Number>>) - Static method in class org.gcube.contentmanagement.graphtools.data.conversions.GraphConverter2D

derivative(double[]) - Static method in class org.gcube.contentmanagement.graphtools.utils.MathFunctions

Derivative() - Method in class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.neurosolutions.Neuron

description - Variable in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.LexicalEngineConfiguration

description - Variable in class org.gcube.dataanalysis.ecoengine.datatypes.StatisticalType

destinationCriteria - Variable in class org.gcube.dataanalysis.ecoengine.test.TablesComparison

destinationCriteria - Variable in class org.gcube.dataanalysis.ecoengine.utils.HspecDiscrepanciesCalculator

destinationCriteria - Variable in class org.gcube.dataanalysis.ecoengine.utils.TablesDiscrepanciesCalculator

destinationdbConnection - Variable in class org.gcube.dataanalysis.ecoengine.test.TablesComparison

destinationdbConnection - Variable in class org.gcube.dataanalysis.ecoengine.utils.HspecDiscrepanciesCalculator

destinationdbConnection - Variable in class org.gcube.dataanalysis.ecoengine.utils.TablesDiscrepanciesCalculator

destinationSelectedColumns - Variable in class org.gcube.dataanalysis.ecoengine.test.TablesComparison

destinationSelectedColumns - Variable in class org.gcube.dataanalysis.ecoengine.utils.HspecDiscrepanciesCalculator

destinationSelectedColumns - Variable in class org.gcube.dataanalysis.ecoengine.utils.TablesDiscrepanciesCalculator

DiscrepancyAnalysis - Class in org.gcube.dataanalysis.ecoengine.evaluation

DiscrepancyAnalysis() - Constructor for class org.gcube.dataanalysis.ecoengine.evaluation.DiscrepancyAnalysis

DistanceCalculator - Class in org.gcube.contentmanagement.lexicalmatcher.utils

DistanceCalculator() - Constructor for class org.gcube.contentmanagement.lexicalmatcher.utils.DistanceCalculator

distanceFTipText() - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Returns the tip text for this property.

distortion(int[][], Instances) - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Calculates the maximum likelihood estimate for the variance.

distributionModel - Variable in class org.gcube.dataanalysis.ecoengine.processing.LocalSimpleSplitGenerator

DistributionQualityAnalysis - Class in org.gcube.dataanalysis.ecoengine.evaluation

DistributionQualityAnalysis() - Constructor for class org.gcube.dataanalysis.ecoengine.evaluation.DistributionQualityAnalysis

draw(Graphics2D, Rectangle2D, Point2D, PlotState, PlotRenderingInfo) - Method in class org.gcube.contentmanagement.graphtools.plotting.demo.SpiderWebPlot

Draws the plot on a Java 2D graphics device (such as the screen or a printer).

drawLabel(Graphics2D, Rectangle2D, double, int, double, double) - Method in class org.gcube.contentmanagement.graphtools.plotting.demo.SpiderWebPlot

Draws the label for one axis.

drawRadarPoly(Graphics2D, Rectangle2D, Point2D, PlotRenderingInfo, int, int, double, double) - Method in class org.gcube.contentmanagement.graphtools.plotting.demo.SpiderWebPlot

Draws a radar plot polygon.

dropTableStatement(String) - Static method in class org.gcube.dataanalysis.ecoengine.utils.DatabaseUtils

DummyAlgorithm - Class in org.gcube.dataanalysis.ecoengine.spatialdistributions

DummyAlgorithm() - Constructor for class org.gcube.dataanalysis.ecoengine.spatialdistributions.DummyAlgorithm

dumpConfig(String, AlgorithmConfiguration) - Static method in class org.gcube.dataanalysis.ecoengine.utils.Transformations

dumpObjectToFile(String, Object) - Static method in class org.gcube.dataanalysis.ecoengine.utils.Transformations

duplicateTableStatement(String, String) - Static method in class org.gcube.dataanalysis.ecoengine.utils.DatabaseUtils

E

en - Variable in class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.Neural_Network

Engine - Class in org.gcube.contentmanagement.lexicalmatcher.analysis.core

Engine(LexicalEngineConfiguration, String, String) - Constructor for class org.gcube.contentmanagement.lexicalmatcher.analysis.core.Engine

engine - Variable in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.chunks.Chunk

engine - Variable in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.chunks.ChunkSet

EngineConfiguration - Class in org.gcube.contentmanagement.lexicalmatcher.analysis.core

EngineConfiguration() - Constructor for class org.gcube.contentmanagement.lexicalmatcher.analysis.core.EngineConfiguration

Entry - Class in org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data

Entry() - Constructor for class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.Entry

entryAcceptanceThreshold - Variable in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.LexicalEngineConfiguration

Envelope - Class in org.gcube.dataanalysis.ecoengine.models.cores.aquamaps

Envelope() - Constructor for class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.Envelope

Envelope(String, String, String, String) - Constructor for class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.Envelope

EnvelopeModel - Enum in org.gcube.dataanalysis.ecoengine.models.cores.aquamaps

EnvelopeName - Enum in org.gcube.dataanalysis.ecoengine.models.cores.aquamaps

EnvelopeSet - Class in org.gcube.dataanalysis.ecoengine.models.cores.aquamaps

EnvelopeSet() - Constructor for class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.EnvelopeSet

environment - Variable in class org.gcube.dataanalysis.ecoengine.connectors.RemoteHspecInputObject

environmentVectors - Variable in class org.gcube.dataanalysis.ecoengine.processing.LocalSimpleSplitGenerator

epsilon - Variable in class org.gcube.dataanalysis.ecoengine.clustering.DBScan

equals(Object) - Method in class org.gcube.contentmanagement.graphtools.plotting.demo.SpiderWebPlot

Tests this plot for equality with an arbitrary object.

equals(CustomWeightedVertex) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.graph.CustomWeightedVertex

error - Variable in class org.gcube.dataanalysis.ecoengine.connectors.RemoteHspecOutputObject

error - Variable in class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.neurosolutions.Neuron

evaluate(AlgorithmConfiguration) - Static method in class org.gcube.dataanalysis.ecoengine.user.EvaluatorT

Evaluator - Interface in org.gcube.dataanalysis.ecoengine.interfaces

EvaluatorsFactory - Class in org.gcube.dataanalysis.ecoengine.processing.factories

EvaluatorsFactory() - Constructor for class org.gcube.dataanalysis.ecoengine.processing.factories.EvaluatorsFactory

evaluatorsFile - Static variable in class org.gcube.dataanalysis.ecoengine.configuration.AlgorithmConfiguration

EvaluatorT - Class in org.gcube.dataanalysis.ecoengine.user

EvaluatorT(ComputationalAgent, AlgorithmConfiguration) - Constructor for class org.gcube.dataanalysis.ecoengine.user.EvaluatorT

eventdate - Variable in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsMerger.OccurrenceRecord

eventDateColumn - Static variable in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsMerger

eventDatFld - Variable in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsMerger

Example1_Species - Class in org.gcube.contentmanagement.lexicalmatcher.analysis.examples

Example1_Species() - Constructor for class org.gcube.contentmanagement.lexicalmatcher.analysis.examples.Example1_Species

Example2_Area - Class in org.gcube.contentmanagement.lexicalmatcher.analysis.examples

Example2_Area() - Constructor for class org.gcube.contentmanagement.lexicalmatcher.analysis.examples.Example2_Area

example3 - Class in org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.neurosolutions

example3() - Constructor for class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.neurosolutions.example3

Example3_SingleMatchShark - Class in org.gcube.contentmanagement.lexicalmatcher.analysis.examples

Example3_SingleMatchShark() - Constructor for class org.gcube.contentmanagement.lexicalmatcher.analysis.examples.Example3_SingleMatchShark

Example4_SingleMatchMitella - Class in org.gcube.contentmanagement.lexicalmatcher.analysis.examples

Example4_SingleMatchMitella() - Constructor for class org.gcube.contentmanagement.lexicalmatcher.analysis.examples.Example4_SingleMatchMitella

Example5_SingleMatchMitella - Class in org.gcube.contentmanagement.lexicalmatcher.analysis.examples

Example5_SingleMatchMitella() - Constructor for class org.gcube.contentmanagement.lexicalmatcher.analysis.examples.Example5_SingleMatchMitella

ExampleDataBuiltGraph - Class in org.gcube.contentmanagement.graphtools.examples.graphsTypes

ExampleDataBuiltGraph() - Constructor for class org.gcube.contentmanagement.graphtools.examples.graphsTypes.ExampleDataBuiltGraph

ExampleDerivative - Class in org.gcube.contentmanagement.graphtools.examples.graphsTypes

ExampleDerivative() - Constructor for class org.gcube.contentmanagement.graphtools.examples.graphsTypes.ExampleDerivative

ExampleDerivative - Class in org.gcube.contentmanagement.graphtools.tests.old

ExampleDerivative() - Constructor for class org.gcube.contentmanagement.graphtools.tests.old.ExampleDerivative

ExampleExternalConfig - Class in org.gcube.contentmanagement.graphtools.examples

ExampleExternalConfig() - Constructor for class org.gcube.contentmanagement.graphtools.examples.ExampleExternalConfig

ExampleExternalConfigPostGress - Class in org.gcube.contentmanagement.graphtools.examples

ExampleExternalConfigPostGress() - Constructor for class org.gcube.contentmanagement.graphtools.examples.ExampleExternalConfigPostGress

ExampleExternalConfigPostGressProd - Class in org.gcube.contentmanagement.graphtools.examples

ExampleExternalConfigPostGressProd() - Constructor for class org.gcube.contentmanagement.graphtools.examples.ExampleExternalConfigPostGressProd

ExampleFilters - Class in org.gcube.contentmanagement.graphtools.examples

ExampleFilters() - Constructor for class org.gcube.contentmanagement.graphtools.examples.ExampleFilters

ExampleFilters2 - Class in org.gcube.contentmanagement.graphtools.examples

ExampleFilters2() - Constructor for class org.gcube.contentmanagement.graphtools.examples.ExampleFilters2

ExampleGuessingExternalCfg - Class in org.gcube.contentmanagement.lexicalmatcher.analysis.examples

ExampleGuessingExternalCfg() - Constructor for class org.gcube.contentmanagement.lexicalmatcher.analysis.examples.ExampleGuessingExternalCfg

ExampleHistogram - Class in org.gcube.contentmanagement.graphtools.examples.graphsTypes

ExampleHistogram() - Constructor for class org.gcube.contentmanagement.graphtools.examples.graphsTypes.ExampleHistogram

ExampleImage - Class in org.gcube.contentmanagement.graphtools.examples.graphsTypes

ExampleImage() - Constructor for class org.gcube.contentmanagement.graphtools.examples.graphsTypes.ExampleImage

ExampleLines - Class in org.gcube.contentmanagement.graphtools.examples.graphsTypes

ExampleLines() - Constructor for class org.gcube.contentmanagement.graphtools.examples.graphsTypes.ExampleLines

ExampleMathFunctions - Class in org.gcube.contentmanagement.graphtools.tests.old

ExampleMathFunctions() - Constructor for class org.gcube.contentmanagement.graphtools.tests.old.ExampleMathFunctions

ExampleMeanVariance - Class in org.gcube.contentmanagement.graphtools.examples

ExampleMeanVariance() - Constructor for class org.gcube.contentmanagement.graphtools.examples.ExampleMeanVariance

ExampleNormalDistribution - Class in org.gcube.contentmanagement.graphtools.examples.graphsTypes

ExampleNormalDistribution() - Constructor for class org.gcube.contentmanagement.graphtools.examples.graphsTypes.ExampleNormalDistribution

ExampleNumericSeries - Class in org.gcube.contentmanagement.graphtools.examples.graphsTypes

ExampleNumericSeries() - Constructor for class org.gcube.contentmanagement.graphtools.examples.graphsTypes.ExampleNumericSeries

ExampleOperatorsInvoking - Class in org.gcube.contentmanagement.graphtools.tests.old

ExampleOperatorsInvoking() - Constructor for class org.gcube.contentmanagement.graphtools.tests.old.ExampleOperatorsInvoking

ExamplePie - Class in org.gcube.contentmanagement.graphtools.examples.graphsTypes

ExamplePie() - Constructor for class org.gcube.contentmanagement.graphtools.examples.graphsTypes.ExamplePie

ExamplePostGressLocalRadar - Class in org.gcube.contentmanagement.graphtools.examples

ExamplePostGressLocalRadar() - Constructor for class org.gcube.contentmanagement.graphtools.examples.ExamplePostGressLocalRadar

ExampleRadar - Class in org.gcube.contentmanagement.graphtools.examples.graphsTypes

ExampleRadar() - Constructor for class org.gcube.contentmanagement.graphtools.examples.graphsTypes.ExampleRadar

ExampleRMUsage - Class in org.gcube.contentmanagement.graphtools.tests.old

ExampleRMUsage() - Constructor for class org.gcube.contentmanagement.graphtools.tests.old.ExampleRMUsage

ExampleScatter - Class in org.gcube.contentmanagement.graphtools.examples.graphsTypes

ExampleScatter() - Constructor for class org.gcube.contentmanagement.graphtools.examples.graphsTypes.ExampleScatter

exampleSet2Matrix(ExampleSet) - Static method in class org.gcube.dataanalysis.ecoengine.utils.Transformations

ExampleStaticConfig - Class in org.gcube.contentmanagement.graphtools.examples

ExampleStaticConfig() - Constructor for class org.gcube.contentmanagement.graphtools.examples.ExampleStaticConfig

ExampleStringGraphData - Class in org.gcube.contentmanagement.graphtools.examples

ExampleStringGraphData() - Constructor for class org.gcube.contentmanagement.graphtools.examples.ExampleStringGraphData

ExampleStringGraphData - Class in org.gcube.contentmanagement.graphtools.tests.show

ExampleStringGraphData() - Constructor for class org.gcube.contentmanagement.graphtools.tests.show.ExampleStringGraphData

ExampleTimeSeries - Class in org.gcube.contentmanagement.graphtools.examples.graphsTypes

ExampleTimeSeries() - Constructor for class org.gcube.contentmanagement.graphtools.examples.graphsTypes.ExampleTimeSeries

ExampleTimeSeries2 - Class in org.gcube.contentmanagement.graphtools.examples.graphsTypes

ExampleTimeSeries2() - Constructor for class org.gcube.contentmanagement.graphtools.examples.graphsTypes.ExampleTimeSeries2

ExampleUserSampleSet - Class in org.gcube.contentmanagement.graphtools.tests.old

ExampleUserSampleSet() - Constructor for class org.gcube.contentmanagement.graphtools.tests.old.ExampleUserSampleSet

executeHQLQuery(String, SessionFactory, boolean) - Static method in class org.gcube.contentmanagement.lexicalmatcher.utils.DatabaseFactory

executeHQLQuery(String, SessionFactory, boolean) - Static method in class org.gcube.dataanalysis.ecoengine.utils.DatabaseFactory

executeHQLUpdate(String, SessionFactory, boolean) - Static method in class org.gcube.contentmanagement.lexicalmatcher.utils.DatabaseFactory

executeHQLUpdate(String, SessionFactory, boolean) - Static method in class org.gcube.dataanalysis.ecoengine.utils.DatabaseFactory

executeNativeUpdate(String, SessionFactory) - Static method in class org.gcube.dataanalysis.ecoengine.utils.DatabaseFactory

executeNode(int, int, int, int, boolean, String, String, String) - Method in class org.gcube.dataanalysis.ecoengine.interfaces.ActorNode

executeNode(int, int, int, int, boolean, String, String, String) - Method in class org.gcube.dataanalysis.ecoengine.interfaces.SpatialProbabilityDistributionNode

executeSQLQuery(String, SessionFactory) - Static method in class org.gcube.contentmanagement.lexicalmatcher.utils.DatabaseFactory

executeSQLQuery(String, SessionFactory) - Static method in class org.gcube.dataanalysis.ecoengine.utils.DatabaseFactory

executeSQLUpdate(String, SessionFactory) - Static method in class org.gcube.contentmanagement.lexicalmatcher.utils.DatabaseFactory

executeSQLUpdate(String, SessionFactory) - Static method in class org.gcube.dataanalysis.ecoengine.utils.DatabaseFactory

executeUpdateNoTransaction(String, String, String, String, String, boolean) - Static method in class org.gcube.dataanalysis.ecoengine.utils.DatabaseFactory

executeUpdateNoTransaction(String, SessionFactory, boolean) - Static method in class org.gcube.dataanalysis.ecoengine.utils.DatabaseFactory

executorService - Variable in class org.gcube.dataanalysis.ecoengine.processing.LocalSimpleSplitGenerator

ExperimentForArticle - Class in org.gcube.dataanalysis.ecoengine.evaluation.bioclimate

ExperimentForArticle() - Constructor for class org.gcube.dataanalysis.ecoengine.evaluation.bioclimate.ExperimentForArticle

ExperimentHSPECForArticle - Class in org.gcube.dataanalysis.ecoengine.evaluation.bioclimate

ExperimentHSPECForArticle() - Constructor for class org.gcube.dataanalysis.ecoengine.evaluation.bioclimate.ExperimentHSPECForArticle

ExperimentsForLatimeria - Class in org.gcube.dataanalysis.ecoengine.test.experiments.latimeria

ExperimentsForLatimeria() - Constructor for class org.gcube.dataanalysis.ecoengine.test.experiments.latimeria.ExperimentsForLatimeria

extProb(OccurrencePointsMerger.OccurrenceRecord, OccurrencePointsMerger.OccurrenceRecord) - Method in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsMerger

extractColumnNames() - Method in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsMerger

F

FeaturesColumnNames - Variable in class org.gcube.dataanalysis.ecoengine.clustering.DBScan

featuresTable - Variable in class org.gcube.dataanalysis.ecoengine.spatialdistributions.BayesianDistribution

featuresTableColumns - Variable in class org.gcube.dataanalysis.ecoengine.spatialdistributions.BayesianDistribution

FeaturesTableColumnsP - Static variable in class org.gcube.dataanalysis.ecoengine.spatialdistributions.BayesianDistribution

FeaturesTableP - Static variable in class org.gcube.dataanalysis.ecoengine.spatialdistributions.BayesianDistribution

FeedForward(double[]) - Method in class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.neurosolutions.NeuralNet

FeedForwardNeuralNetworkDistribution - Class in org.gcube.dataanalysis.ecoengine.spatialdistributions

FeedForwardNeuralNetworkDistribution() - Constructor for class org.gcube.dataanalysis.ecoengine.spatialdistributions.FeedForwardNeuralNetworkDistribution

FeedForwardNN - Class in org.gcube.dataanalysis.ecoengine.models

FeedForwardNN() - Constructor for class org.gcube.dataanalysis.ecoengine.models.FeedForwardNN

FeedForwardNNFile - Class in org.gcube.dataanalysis.ecoengine.models.testing

FeedForwardNNFile() - Constructor for class org.gcube.dataanalysis.ecoengine.models.testing.FeedForwardNNFile

FieldDescr - Class in org.gcube.portlets.user.timeseries.charts.support.tablemodel

FieldDescr(String) - Constructor for class org.gcube.portlets.user.timeseries.charts.support.tablemodel.FieldDescr

FieldDescr(String, FieldType) - Constructor for class org.gcube.portlets.user.timeseries.charts.support.tablemodel.FieldDescr

FieldDescr(String, String) - Constructor for class org.gcube.portlets.user.timeseries.charts.support.tablemodel.FieldDescr

FieldDescr(String, String, FieldType) - Constructor for class org.gcube.portlets.user.timeseries.charts.support.tablemodel.FieldDescr

FieldType - Enum in org.gcube.portlets.user.timeseries.charts.support.tablemodel

fileName - Variable in class org.gcube.dataanalysis.ecoengine.models.ModelAquamapsNN

FileTools - Class in org.gcube.contentmanagement.lexicalmatcher.utils

FileTools() - Constructor for class org.gcube.contentmanagement.lexicalmatcher.utils.FileTools

Filter - Class in org.gcube.contentmanagement.graphtools.core.filters

Filter(String, String, String) - Constructor for class org.gcube.contentmanagement.graphtools.core.filters.Filter

Filter(String, String) - Constructor for class org.gcube.contentmanagement.graphtools.core.filters.Filter

filterProbabilitySet(Queue<String>) - Method in interface org.gcube.dataanalysis.ecoengine.interfaces.SpatialProbabilityDistributionTable

filterProbabilitySet(Queue<String>) - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.AquamapsNative

filterProbabilitySet(Queue<String>) - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.AquamapsSuitable

filterProbabiltyRow(String) - Method in interface org.gcube.dataanalysis.ecoengine.interfaces.SpatialProbabilityDistributionTable

filterProbabiltyRow(String) - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.AquamapsSuitable

filterXRange(List<Point<? extends Number, ? extends Number>>, String, String) - Static method in class org.gcube.contentmanagement.graphtools.data.conversions.GraphConverter2D

finalTable - Static variable in class org.gcube.dataanalysis.ecoengine.transducers.QueryExecutor

FinalTableLabel - Static variable in class org.gcube.dataanalysis.ecoengine.spatialdistributions.BayesianDistribution

finalTableLabel - Variable in class org.gcube.dataanalysis.ecoengine.spatialdistributions.BayesianDistribution

finalTableLabel - Variable in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsMerger

finalTableLabel - Variable in class org.gcube.dataanalysis.ecoengine.transducers.QueryExecutor

finalTableLabel$ - Static variable in class org.gcube.dataanalysis.ecoengine.transducers.QueryExecutor

FinalTableName - Static variable in class org.gcube.dataanalysis.ecoengine.spatialdistributions.BayesianDistribution

finalTableName - Variable in class org.gcube.dataanalysis.ecoengine.spatialdistributions.BayesianDistribution

finalTableName - Variable in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsMerger

finalTableName - Variable in class org.gcube.dataanalysis.ecoengine.transducers.QueryExecutor

finalTableNameF - Static variable in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsMerger

finalTableNameL - Static variable in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsMerger

FinalTableValue - Static variable in class org.gcube.dataanalysis.ecoengine.spatialdistributions.BayesianDistribution

FinalTableValueType - Static variable in class org.gcube.dataanalysis.ecoengine.spatialdistributions.BayesianDistribution

findBest() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.CategoryScores

findBest() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.CategoryScoresOld

findBestList() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.CategoryScores

findBestList() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.CategoryScoresOld

findSpikes(double[], double) - Static method in class org.gcube.contentmanagement.graphtools.utils.MathFunctions

findSpikes(double[]) - Static method in class org.gcube.contentmanagement.graphtools.utils.MathFunctions

findZeros(double[]) - Static method in class org.gcube.contentmanagement.graphtools.utils.MathFunctions

firstbest - Variable in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsMerger

G

GaussianDistributionGraph - Class in org.gcube.contentmanagement.graphtools.plotting.graphs

GaussianDistributionGraph(String) - Constructor for class org.gcube.contentmanagement.graphtools.plotting.graphs.GaussianDistributionGraph

generaOutput(double) - Method in class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.Neuron

generate() - Method in class org.gcube.dataanalysis.ecoengine.processing.RainyCloudGenerator

generate(AlgorithmConfiguration) - Static method in class org.gcube.dataanalysis.ecoengine.user.GeneratorT

generate(AlgorithmConfiguration) - Method in class org.gcube.dataanalysis.ecoengine.utils.TrainingSetsGenerator

generateAbsenceTable() - Static method in class org.gcube.dataanalysis.ecoengine.test.experiments.latimeria.ExperimentsForLatimeria

generateAquamapsNativeSuitable() - Static method in class org.gcube.dataanalysis.ecoengine.test.experiments.latimeria.ExperimentsForLatimeria

generateAquamapsNativeSuitableNeuralNetwokrs() - Static method in class org.gcube.dataanalysis.ecoengine.test.experiments.latimeria.ExperimentsForLatimeria

generateChunkSet() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.chunks.ChunkSet

generateDataset() - Method in class org.gcube.contentmanagement.graphtools.abstracts.GenericStandaloneGraph

generateDataset() - Method in class org.gcube.contentmanagement.graphtools.plotting.graphs.GaussianDistributionGraph

generateDataset() - Method in class org.gcube.contentmanagement.graphtools.plotting.graphs.HistogramGraph

generateDataset() - Method in class org.gcube.contentmanagement.graphtools.plotting.graphs.LineGraph

generateDataset() - Method in class org.gcube.contentmanagement.graphtools.plotting.graphs.NumericSeriesGraph

generateDataset() - Method in class org.gcube.contentmanagement.graphtools.plotting.graphs.PieGraph

generateDataset() - Method in class org.gcube.contentmanagement.graphtools.plotting.graphs.RadarGraph

generateDataset() - Method in class org.gcube.contentmanagement.graphtools.plotting.graphs.ScatterGraphGeneric

generateDataset() - Method in class org.gcube.contentmanagement.graphtools.plotting.graphs.ScatterGraphNumeric

generateDataset() - Method in class org.gcube.contentmanagement.graphtools.plotting.graphs.TimeSeriesGraph

generateDataset() - Method in class org.gcube.contentmanagement.graphtools.plotting.graphs.TransectLineGraph

generateDataset() - Method in class org.gcube.dataanalysis.ecoengine.evaluation.bioclimate.BioClimateGraph

GenerateDataTest - Class in org.gcube.portlets.user.timeseries.charts.support.tests

GenerateDataTest() - Constructor for class org.gcube.portlets.user.timeseries.charts.support.tests.GenerateDataTest

generateExampleSet() - Method in class org.gcube.contentmanagement.graphtools.abstracts.SamplesTable

generateGraph() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.graph.GraphDisplayer

generateGraphs(int, String, String, String, String, String, String...) - Method in class org.gcube.contentmanagement.graphtools.core.StatisticsGenerator

generateHCAFFilter() - Static method in class org.gcube.dataanalysis.ecoengine.test.experiments.latimeria.ExperimentsForLatimeria

generateHSPENTable() - Static method in class org.gcube.dataanalysis.ecoengine.test.experiments.latimeria.ExperimentsForLatimeria

generateMaxMinHspec(String, String, String, SessionFactory) - Static method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.AquamapsSuitable

generateNNName(String, String, String) - Static method in class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.Neural_Network

generateNovelList() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.CategoryOrderedList

generatePosition(int, int) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.graph.GraphDisplayer

generatePresenceTable() - Static method in class org.gcube.dataanalysis.ecoengine.test.experiments.latimeria.ExperimentsForLatimeria

generateRandomAbsenceTable() - Static method in class org.gcube.dataanalysis.ecoengine.test.experiments.latimeria.ExperimentsForLatimeria

generateRandomGraph() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.graph.GraphDisplayer

generateRandoms(int, int, int) - Static method in class org.gcube.contentmanagement.graphtools.utils.MathFunctions

generateRandoms(int, int, int) - Static method in class org.gcube.contentmanagement.lexicalmatcher.utils.MathFunctions

generateSampleTable(ExampleSet) - Method in class org.gcube.contentmanagement.graphtools.abstracts.SamplesTable

generateSequence(int) - Static method in class org.gcube.contentmanagement.graphtools.utils.MathFunctions

generateSequence(int) - Static method in class org.gcube.contentmanagement.lexicalmatcher.utils.MathFunctions

generateStringGraphs(int, String, String, String, String, String, String...) - Method in class org.gcube.contentmanagement.graphtools.core.StatisticsGenerator

generateUpTo5StarGraph() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.graph.GraphDisplayer

generativeModel - Variable in class org.gcube.dataanalysis.ecoengine.connectors.RemoteHspecInputObject

Generator - Interface in org.gcube.dataanalysis.ecoengine.interfaces

GeneratorsFactory - Class in org.gcube.dataanalysis.ecoengine.processing.factories

GeneratorsFactory() - Constructor for class org.gcube.dataanalysis.ecoengine.processing.factories.GeneratorsFactory

generatorsFile - Static variable in class org.gcube.dataanalysis.ecoengine.configuration.AlgorithmConfiguration

GeneratorT - Class in org.gcube.dataanalysis.ecoengine.user

GeneratorT(ComputationalAgent) - Constructor for class org.gcube.dataanalysis.ecoengine.user.GeneratorT

GenericAlgorithm - Interface in org.gcube.dataanalysis.ecoengine.interfaces

GenericDBExtractor - Interface in org.gcube.contentmanagement.graphtools.abstracts

GenericStandaloneGraph - Class in org.gcube.contentmanagement.graphtools.abstracts

GenericStandaloneGraph(String) - Constructor for class org.gcube.contentmanagement.graphtools.abstracts.GenericStandaloneGraph

geographicEvolutionAnalysis(String[], String[]) - Method in class org.gcube.dataanalysis.ecoengine.evaluation.bioclimate.BioClimateAnalysis

Generates a geographic trend for each hspec feature: ice con, salinity, sst in each fao area

get(Integer, Integer) - Method in class org.gcube.contentmanagement.graphtools.data.BigSparseTable

getAdditionalInformation(Object, Object) - Method in interface org.gcube.dataanalysis.ecoengine.interfaces.SpatialProbabilityDistributionTable

getAdditionalInformation(Object, Object) - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.AquamapsSuitable

getAdditionalMetaInformation() - Method in interface org.gcube.dataanalysis.ecoengine.interfaces.SpatialProbabilityDistributionTable

getAdditionalMetaInformation() - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.AquamapsSuitable

getAgent() - Method in class org.gcube.dataanalysis.ecoengine.configuration.AlgorithmConfiguration

getAlgorithm() - Method in interface org.gcube.dataanalysis.ecoengine.interfaces.Generator

getAlgorithm() - Method in class org.gcube.dataanalysis.ecoengine.processing.LocalSimpleSplitGenerator

getAlgorithm() - Method in class org.gcube.dataanalysis.ecoengine.processing.LocalSplitGenerator

getAlgorithmParameters(String, String) - Static method in class org.gcube.dataanalysis.ecoengine.processing.factories.GeneratorsFactory

getAlias() - Method in class org.gcube.portlets.user.timeseries.charts.support.tablemodel.FieldDescr

getAlias() - Method in class org.gcube.portlets.user.timeseries.charts.support.tablemodel.TableDescr

getAllClusterers(String) - Static method in class org.gcube.dataanalysis.ecoengine.processing.factories.ClusterersFactory

getAllEvaluators(String) - Static method in class org.gcube.dataanalysis.ecoengine.processing.factories.EvaluatorsFactory

getAllFeatures(String) - Static method in class org.gcube.dataanalysis.ecoengine.processing.factories.ProcessorsFactory

getAllFeaturesUser(String) - Static method in class org.gcube.dataanalysis.ecoengine.processing.factories.ProcessorsFactory

getAllGenerators(String) - Static method in class org.gcube.dataanalysis.ecoengine.processing.factories.GeneratorsFactory

getAllSpecies(String) - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.MaxMinGenerator

getAllTransducerers(String) - Static method in class org.gcube.dataanalysis.ecoengine.processing.factories.TransducerersFactory

getAttributes() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.Entry

getAxisLabelGap() - Method in class org.gcube.contentmanagement.graphtools.plotting.demo.SpiderWebPlot

Returns the axis label gap.

getAxisLinePaint() - Method in class org.gcube.contentmanagement.graphtools.plotting.demo.SpiderWebPlot

Returns the paint used to draw the axis lines.

getAxisLineStroke() - Method in class org.gcube.contentmanagement.graphtools.plotting.demo.SpiderWebPlot

Returns the stroke used to draw the axis lines.

getBaseSeriesOutlinePaint() - Method in class org.gcube.contentmanagement.graphtools.plotting.demo.SpiderWebPlot

Returns the base series paint.

getBaseSeriesOutlineStroke() - Method in class org.gcube.contentmanagement.graphtools.plotting.demo.SpiderWebPlot

Returns the base series stroke.

getBaseSeriesPaint() - Method in class org.gcube.contentmanagement.graphtools.plotting.demo.SpiderWebPlot

Returns the base series paint.

getBinValue() - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Gets value that represents true in a new numeric attribute.

getBoundingBoxInfo(String, String, String, String, Object[], String) - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.AquamapsAlgorithmCore

getBoundingBoxInformation(Object[], Object[]) - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.AquamapsSuitable

getCachePath() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.EngineConfiguration

getCapabilities() - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Returns default capabilities of the clusterer.

getCategoriesTree(SessionFactory) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.graph.TreeExtractor

getCategory(String) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.CategoryOrderedList

getCategory() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.SingleResult

getCategoryDiscardDifferencialThreshold() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.LexicalEngineConfiguration

getCategoryDiscardThreshold() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.LexicalEngineConfiguration

getCategoryElements() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.CategoryScores

getCategoryFrom() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.RelationEdge

getCategoryFrom() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.graph.RelationEdge

getCategoryfromIndex(String) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.DBObjectTranslator

getCategoryName() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.chunks.ReferenceChunk

getCategoryTo() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.RelationEdge

getCategoryTo() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.graph.RelationEdge

getChunkSize() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.LexicalEngineConfiguration

getChunkSize() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.chunks.ChunkSet

getClasses(String) - Static method in class org.gcube.dataanalysis.ecoengine.processing.factories.ProcessorsFactory

getClassification(int) - Method in class org.gcube.contentmanagement.graphtools.abstracts.SamplesTable

getClassification(int) - Method in class org.gcube.contentmanagement.graphtools.data.BigSamplesTable

getClassification(int) - Method in class org.gcube.contentmanagement.graphtools.data.GraphSamplesTable

getClassification() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.run.CategoryGuesser

getClassification(double[]) - Method in class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.Neural_Network

getClassificationOLD() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.run.CategoryGuesser

getClassificationPlain() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.run.CategoryGuesser

getClassName() - Method in class org.gcube.dataanalysis.ecoengine.datatypes.PrimitiveType

getClassName() - Method in class org.gcube.dataanalysis.ecoengine.datatypes.PrimitiveTypesList

getClusterCenters() - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Return the centers of the clusters as an Instances object

getClusterer(AlgorithmConfiguration) - Static method in class org.gcube.dataanalysis.ecoengine.processing.factories.ClusterersFactory

getClustererParameters(String, String) - Static method in class org.gcube.dataanalysis.ecoengine.processing.factories.ClusterersFactory

getClusterers(AlgorithmConfiguration) - Static method in class org.gcube.dataanalysis.ecoengine.processing.factories.ClusterersFactory

getColumn() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.SingleResult

getColumn(int, double[][]) - Static method in class org.gcube.dataanalysis.ecoengine.utils.Transformations

getColumnDecriptions() - Method in class org.gcube.dataanalysis.ecoengine.utils.DatabaseUtils

getColumnName(int) - Method in class org.gcube.dataanalysis.ecoengine.utils.DatabaseUtils

getColumnsElementsStatement(String, String, String) - Static method in class org.gcube.dataanalysis.ecoengine.utils.DatabaseUtils

getColumnsNamesStatement(String) - Static method in class org.gcube.dataanalysis.ecoengine.utils.DatabaseUtils

getColumnType() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.chunks.TimeSeriesChunk

getColumnType(int) - Method in class org.gcube.dataanalysis.ecoengine.utils.DatabaseUtils

getComponents(double[]) - Method in class org.gcube.dataanalysis.ecoengine.models.cores.pca.PrincipalComponentAnalysis

getComponentsMatrix(double[][]) - Method in class org.gcube.dataanalysis.ecoengine.models.cores.pca.PrincipalComponentAnalysis

getConfig() - Static method in class org.gcube.dataanalysis.ecoengine.test.regression.Regressor

getConfigPath() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.EngineConfiguration

getConfigPath() - Method in class org.gcube.dataanalysis.ecoengine.configuration.AlgorithmConfiguration

getConnectionFromConfig(AlgorithmConfiguration) - Static method in class org.gcube.dataanalysis.ecoengine.configuration.AlgorithmConfiguration

getContent() - Method in class org.gcube.dataanalysis.ecoengine.datatypes.PrimitiveType

getCoordinates() - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.Hspen

getCorrectValueForOutput(double) - Method in class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.Neural_Network

getCorrectValueFromOutput(double) - Method in class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.Neural_Network

getCsquareCode() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.EngineConfiguration

getCsquareCode() - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.OccurrencePoint

getCutOffFactor() - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Gets the cutoff factor.

getData() - Method in class org.gcube.portlets.user.timeseries.charts.support.types.GraphData

getDatabaseAutomaticTestTable() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.EngineConfiguration

getDatabaseAutomaticTestTable() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.LexicalEngineConfiguration

getDatabaseDialect() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.EngineConfiguration

getDatabaseDialect() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.LexicalEngineConfiguration

getDatabaseDriver() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.EngineConfiguration

getDatabaseDriver() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.LexicalEngineConfiguration

getDatabaseIdleConnectionTestPeriod() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.EngineConfiguration

getDatabaseIdleConnectionTestPeriod() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.LexicalEngineConfiguration

getDatabaseParameter() - Method in class org.gcube.dataanalysis.ecoengine.datatypes.DatabaseType

getDatabasePassword() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.EngineConfiguration

getDatabasePassword() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.LexicalEngineConfiguration

getDatabaseURL() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.EngineConfiguration

getDatabaseURL() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.LexicalEngineConfiguration

getDatabaseUserName() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.EngineConfiguration

getDatabaseUserName() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.LexicalEngineConfiguration

getDataExtractOrder() - Method in class org.gcube.contentmanagement.graphtools.plotting.demo.SpiderWebPlot

Returns the data extract order (by row or by column).

getDataset() - Method in class org.gcube.contentmanagement.graphtools.plotting.demo.SpiderWebPlot

Returns the dataset.

getDBConnection(String, String, String, String) - Static method in class org.gcube.dataanalysis.ecoengine.utils.DatabaseFactory

getDBSession() - Method in class org.gcube.contentmanagement.graphtools.core.StatisticsGenerator

getDBSession() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.Engine

getDBSession(LexicalEngineConfiguration) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.Engine

getDebugLevel() - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Gets the debug level.

getDebugVectorsFile() - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Gets the file name for a file that has the random vectors stored.

getDefaultDatabaseConfiguration(String) - Static method in class org.gcube.dataanalysis.ecoengine.processing.factories.ProcessorsFactory

getDefaultDatabaseConfiguration(String) - Static method in class org.gcube.dataanalysis.ecoengine.utils.DatabaseFactory

getDefaultValue() - Method in class org.gcube.dataanalysis.ecoengine.datatypes.StatisticalType

getDepth() - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.Hspen

getDescription() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.LexicalEngineConfiguration

getDescription() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.Category

getDescription() - Method in interface org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.interfaces.Reference

getDescription() - Method in class org.gcube.dataanalysis.ecoengine.clustering.DBScan

getDescription() - Method in class org.gcube.dataanalysis.ecoengine.clustering.KMeans

getDescription() - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeansWrapper

getDescription() - Method in class org.gcube.dataanalysis.ecoengine.datatypes.StatisticalType

getDescription() - Method in class org.gcube.dataanalysis.ecoengine.evaluation.DiscrepancyAnalysis

getDescription() - Method in class org.gcube.dataanalysis.ecoengine.evaluation.DistributionQualityAnalysis

getDescription() - Method in class org.gcube.dataanalysis.ecoengine.evaluation.HabitatRepresentativeness

getDescription() - Method in interface org.gcube.dataanalysis.ecoengine.interfaces.ComputationalAgent

getDescription() - Method in interface org.gcube.dataanalysis.ecoengine.interfaces.GenericAlgorithm

getDescription() - Method in interface org.gcube.dataanalysis.ecoengine.interfaces.Model

getDescription() - Method in class org.gcube.dataanalysis.ecoengine.modeling.SimpleModeler

getDescription() - Method in class org.gcube.dataanalysis.ecoengine.models.FeedForwardNN

getDescription() - Method in class org.gcube.dataanalysis.ecoengine.models.ModelAquamapsNN

getDescription() - Method in class org.gcube.dataanalysis.ecoengine.models.ModelAquamapsNNNS

getDescription() - Method in class org.gcube.dataanalysis.ecoengine.models.ModelHSPEN

getDescription() - Method in class org.gcube.dataanalysis.ecoengine.models.testing.FeedForwardNNFile

getDescription(String, String) - Static method in class org.gcube.dataanalysis.ecoengine.processing.factories.ClusterersFactory

getDescription(String, String) - Static method in class org.gcube.dataanalysis.ecoengine.processing.factories.EvaluatorsFactory

getDescription(String, String) - Static method in class org.gcube.dataanalysis.ecoengine.processing.factories.GeneratorsFactory

getDescription(String, String) - Static method in class org.gcube.dataanalysis.ecoengine.processing.factories.ModelersFactory

getDescription(String, String) - Static method in class org.gcube.dataanalysis.ecoengine.processing.factories.ProcessorsFactory

getDescription(String, String) - Static method in class org.gcube.dataanalysis.ecoengine.processing.factories.TransducerersFactory

getDescription() - Method in class org.gcube.dataanalysis.ecoengine.processing.LocalSimpleSplitGenerator

getDescription() - Method in class org.gcube.dataanalysis.ecoengine.processing.LocalSplitGenerator

getDescription() - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.AquamapsNN

getDescription() - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.AquamapsNNNS

getDescription() - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.AquamapsNNSuitable

getDescription() - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.AquamapsSuitable

getDescription() - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.DummyAlgorithm

getDescription() - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.FeedForwardNeuralNetworkDistribution

getDescription() - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.TestAlgorithm

getDescription() - Method in class org.gcube.dataanalysis.ecoengine.transducers.BioClimateHCAFTransducer

getDescription() - Method in class org.gcube.dataanalysis.ecoengine.transducers.BioClimateHSPECTransducer

getDescription() - Method in class org.gcube.dataanalysis.ecoengine.transducers.BioClimateHSPENTransducer

getDescription() - Method in class org.gcube.dataanalysis.ecoengine.transducers.InterpolationTransducer

getDescription() - Method in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsDuplicatesDeleter

getDescription() - Method in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsInSeaOnEarth

getDescription() - Method in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsIntersector

getDescription() - Method in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsMerger

getDescription() - Method in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsSubtraction

getDescription() - Method in class org.gcube.dataanalysis.ecoengine.transducers.QueryExecutor

getDescription() - Method in class org.gcube.dataanalysis.ecoengine.transducers.simplequeryexecutors.HcafFilter

getDescription() - Method in class org.gcube.dataanalysis.ecoengine.transducers.simplequeryexecutors.HspenFilter

getDescription() - Method in class org.gcube.dataanalysis.ecoengine.transducers.simplequeryexecutors.MarineAbsencePointsFromAquamapsDistribution

getDescription() - Method in class org.gcube.dataanalysis.ecoengine.transducers.simplequeryexecutors.MarinePresencePoints

getDescription() - Method in class org.gcube.dataanalysis.ecoengine.transducers.TestTrans

getDetailedMatches() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.run.CategoryGuesser

getDetailedResults() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.chunks.TimeSeriesChunk

getDetailedSingletonEntry() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.run.CategoryGuesser

getDinstictElements(String, String, String) - Static method in class org.gcube.dataanalysis.ecoengine.utils.DatabaseUtils

getDirection() - Method in class org.gcube.contentmanagement.graphtools.plotting.demo.SpiderWebPlot

Returns the direction in which the radar axes are drawn (clockwise or anti-clockwise).

getDiscrepancyConfiguration(String, String, String, String, String, String, String, String, String) - Static method in class org.gcube.dataanalysis.ecoengine.user.EvaluatorT

getDistanceF() - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Gets the distance function.

getDistanceFSpec() - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Gets the distance function specification string, which contains the class name of the distance function class and any options to it.

getDistributionTable() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.EngineConfiguration

getDistributionTableStatement() - Method in interface org.gcube.dataanalysis.ecoengine.interfaces.SpatialProbabilityDistributionTable

getDistributionTableStatement() - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.AquamapsSuitable

getEigenvalue(int) - Method in class org.gcube.dataanalysis.ecoengine.models.cores.pca.PrincipalComponentAnalysis

getEigenvalues() - Method in class org.gcube.dataanalysis.ecoengine.models.cores.pca.PrincipalComponentAnalysis

getEigenvector(int) - Method in class org.gcube.dataanalysis.ecoengine.models.cores.pca.PrincipalComponentAnalysis

getElement(Object[], int) - Static method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.AquamapsEnvelopeAlgorithm

getElement(Object[], int) - Static method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.AquamapsAlgorithmCore

getElements() - Method in class org.gcube.dataanalysis.ecoengine.utils.Tuple

getEMostLong() - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.Coordinates

getEndpoints() - Method in class org.gcube.dataanalysis.ecoengine.configuration.AlgorithmConfiguration

getEntries() - Method in class org.gcube.portlets.user.timeseries.charts.support.types.Point

getEntryAcceptanceThreshold() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.LexicalEngineConfiguration

getEnvelopes() - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.EnvelopeSet

getEnvelopeString() - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.EnvelopeSet

getEvaluationConfiguration(String, String, String, String, String, String, String, String, String, String, String) - Static method in class org.gcube.dataanalysis.ecoengine.user.EvaluatorT

getEvaluator(AlgorithmConfiguration) - Static method in class org.gcube.dataanalysis.ecoengine.processing.factories.EvaluatorsFactory

getEvaluatorParameters(String, String) - Static method in class org.gcube.dataanalysis.ecoengine.processing.factories.EvaluatorsFactory

getEvaluators(AlgorithmConfiguration) - Static method in class org.gcube.dataanalysis.ecoengine.processing.factories.EvaluatorsFactory

getFamilyID() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.SingleResult

getFaoAreas() - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.Hspen

getFields() - Method in class org.gcube.portlets.user.timeseries.charts.support.tablemodel.TableDescr

getFirstElement() - Method in class org.gcube.contentmanagement.graphtools.core.filters.Filter

getFirstNumber() - Method in class org.gcube.contentmanagement.graphtools.core.filters.Filter

getFrom() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.RelationEdge

getFrom() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.graph.RelationEdge

getGcubeScope() - Method in class org.gcube.dataanalysis.ecoengine.configuration.AlgorithmConfiguration

getGeneralProperties() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.EngineConfiguration

getGeneralProperties() - Method in class org.gcube.dataanalysis.ecoengine.configuration.AlgorithmConfiguration

getGenerationConfig(int, String, String, String, String, String, String, String, String) - Static method in class org.gcube.dataanalysis.ecoengine.user.GeneratorT

getGenerator(AlgorithmConfiguration) - Static method in class org.gcube.dataanalysis.ecoengine.processing.factories.GeneratorsFactory

getGenerators(AlgorithmConfiguration) - Static method in class org.gcube.dataanalysis.ecoengine.processing.factories.GeneratorsFactory

getGeographicalID(Object) - Method in interface org.gcube.dataanalysis.ecoengine.interfaces.SpatialProbabilityDistributionGeneric

getGeographicalID(Object) - Method in interface org.gcube.dataanalysis.ecoengine.interfaces.SpatialProbabilityDistributionTable

getGeographicalID(Object) - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.AquamapsSuitable

getGeographicalID(Object) - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.BayesianDistribution

getGeographicalID(Object) - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.DummyAlgorithm

getGeographicalID(Object) - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.TestAlgorithm

getGeographicalInfoObjects() - Method in interface org.gcube.dataanalysis.ecoengine.interfaces.SpatialProbabilityDistributionGeneric

getGeographicalInfoObjects() - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.BayesianDistribution

getGeographicalInfoObjects() - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.DummyAlgorithm

getGeographicalInfoObjects() - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.TestAlgorithm

getGeographicalInfoQuery() - Method in interface org.gcube.dataanalysis.ecoengine.interfaces.SpatialProbabilityDistributionTable

getGeographicalInfoQuery() - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.AquamapsSuitable

getGeographicalInfoType() - Method in interface org.gcube.dataanalysis.ecoengine.interfaces.SpatialProbabilityDistributionGeneric

getGeographicalInfoType() - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.BayesianDistribution

getGeographicalInfoType() - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.DummyAlgorithm

getGeographicalInfoType() - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.TestAlgorithm

getGraph() - Method in class org.gcube.contentmanagement.graphtools.data.GraphSamplesTable

getGraphs() - Method in class org.gcube.portlets.user.timeseries.charts.support.types.GraphGroups

getHcafTable() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.EngineConfiguration

getHeadPercent() - Method in class org.gcube.contentmanagement.graphtools.plotting.demo.SpiderWebPlot

Returns the head percent.

getHspenTable() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.EngineConfiguration

getIceConcentration() - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.Hspen

getIdColumn() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.LexicalEngineConfiguration

getIndex() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.Category

getIndex() - Method in interface org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.interfaces.Reference

getInfrastructure() - Method in class org.gcube.dataanalysis.ecoengine.clustering.DBScan

getInfrastructure() - Method in interface org.gcube.dataanalysis.ecoengine.interfaces.ComputationalAgent

getInfrastructure() - Method in class org.gcube.dataanalysis.ecoengine.interfaces.DataAnalysis

The weight of this procedure is the lowest as it runs on local machine

getInfrastructure() - Method in class org.gcube.dataanalysis.ecoengine.modeling.SimpleModeler

getInfrastructure() - Method in class org.gcube.dataanalysis.ecoengine.processing.LocalSimpleSplitGenerator

getInfrastructure() - Method in class org.gcube.dataanalysis.ecoengine.processing.LocalSplitGenerator

getInfrastructure() - Method in class org.gcube.dataanalysis.ecoengine.processing.RainyCloudGenerator

getInfrastructure() - Method in class org.gcube.dataanalysis.ecoengine.transducers.BioClimateHSPECTransducer

getInfrastructure() - Method in class org.gcube.dataanalysis.ecoengine.transducers.InterpolationTransducer

getInfrastructure() - Method in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsMerger

getInfrastructure() - Method in class org.gcube.dataanalysis.ecoengine.transducers.QueryExecutor

getInfrastructure() - Method in class org.gcube.dataanalysis.ecoengine.transducers.TestTrans

getInputCenterFile() - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Gets the file to read the list of centers from.

getInputParameters() - Method in class org.gcube.dataanalysis.ecoengine.clustering.DBScan

getInputParameters() - Method in class org.gcube.dataanalysis.ecoengine.clustering.KMeans

getInputParameters() - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeansWrapper

getInputParameters() - Method in class org.gcube.dataanalysis.ecoengine.evaluation.DiscrepancyAnalysis

getInputParameters() - Method in class org.gcube.dataanalysis.ecoengine.evaluation.DistributionQualityAnalysis

getInputParameters() - Method in class org.gcube.dataanalysis.ecoengine.evaluation.HabitatRepresentativeness

getInputParameters() - Method in interface org.gcube.dataanalysis.ecoengine.interfaces.ComputationalAgent

getInputParameters() - Method in interface org.gcube.dataanalysis.ecoengine.interfaces.GenericAlgorithm

getInputParameters() - Method in interface org.gcube.dataanalysis.ecoengine.interfaces.Model

getInputParameters() - Method in class org.gcube.dataanalysis.ecoengine.modeling.SimpleModeler

getInputParameters() - Method in class org.gcube.dataanalysis.ecoengine.models.FeedForwardNN

getInputParameters() - Method in class org.gcube.dataanalysis.ecoengine.models.ModelAquamapsNN

getInputParameters() - Method in class org.gcube.dataanalysis.ecoengine.models.ModelAquamapsNNNS

getInputParameters() - Method in class org.gcube.dataanalysis.ecoengine.models.ModelHSPEN

getInputParameters() - Method in class org.gcube.dataanalysis.ecoengine.models.testing.FeedForwardNNFile

getInputParameters() - Method in class org.gcube.dataanalysis.ecoengine.processing.LocalSimpleSplitGenerator

getInputParameters() - Method in class org.gcube.dataanalysis.ecoengine.processing.LocalSplitGenerator

getInputParameters() - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.AquamapsNN

getInputParameters() - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.AquamapsNNNS

getInputParameters() - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.AquamapsNNSuitable

getInputParameters() - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.AquamapsSuitable

getInputParameters() - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.BayesianDistribution

getInputParameters() - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.DummyAlgorithm

getInputParameters() - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.TestAlgorithm

getInputParameters() - Method in class org.gcube.dataanalysis.ecoengine.transducers.BioClimateHCAFTransducer

getInputParameters() - Method in class org.gcube.dataanalysis.ecoengine.transducers.BioClimateHSPECTransducer

getInputParameters() - Method in class org.gcube.dataanalysis.ecoengine.transducers.BioClimateHSPENTransducer

getInputParameters() - Method in class org.gcube.dataanalysis.ecoengine.transducers.InterpolationTransducer

getInputParameters() - Method in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsDuplicatesDeleter

getInputParameters() - Method in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsInSeaOnEarth

getInputParameters() - Method in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsMerger

getInputParameters() - Method in class org.gcube.dataanalysis.ecoengine.transducers.QueryExecutor

getInputParameters() - Method in class org.gcube.dataanalysis.ecoengine.transducers.simplequeryexecutors.HcafFilter

getInputParameters() - Method in class org.gcube.dataanalysis.ecoengine.transducers.simplequeryexecutors.HspenFilter

getInputParameters() - Method in class org.gcube.dataanalysis.ecoengine.transducers.simplequeryexecutors.MarineAbsencePointsFromAquamapsDistribution

getInputParameters() - Method in class org.gcube.dataanalysis.ecoengine.transducers.simplequeryexecutors.MarinePresencePoints

getInputParameters() - Method in class org.gcube.dataanalysis.ecoengine.transducers.TestTrans

getInstance(String) - Method in class org.gcube.contentmanagement.graphtools.abstracts.GenericStandaloneGraph

getInstance(String) - Method in class org.gcube.contentmanagement.graphtools.plotting.graphs.GaussianDistributionGraph

getInstance(String) - Method in class org.gcube.contentmanagement.graphtools.plotting.graphs.HistogramGraph

getInstance(String) - Method in class org.gcube.contentmanagement.graphtools.plotting.graphs.LineGraph

getInstance(String) - Method in class org.gcube.contentmanagement.graphtools.plotting.graphs.NumericSeriesGraph

getInstance(String) - Method in class org.gcube.contentmanagement.graphtools.plotting.graphs.PieGraph

getInstance(String) - Method in class org.gcube.contentmanagement.graphtools.plotting.graphs.RadarGraph

getInstance(String) - Method in class org.gcube.contentmanagement.graphtools.plotting.graphs.ScatterGraphGeneric

getInstance(String) - Method in class org.gcube.contentmanagement.graphtools.plotting.graphs.ScatterGraphNumeric

getInstance(String) - Method in class org.gcube.contentmanagement.graphtools.plotting.graphs.TimeSeriesGraph

getInstance(String) - Method in class org.gcube.contentmanagement.graphtools.plotting.graphs.TransectLineGraph

getInstance(String) - Method in class org.gcube.dataanalysis.ecoengine.evaluation.bioclimate.BioClimateGraph

getInteriorGap() - Method in class org.gcube.contentmanagement.graphtools.plotting.demo.SpiderWebPlot

Returns the interior gap, measured as a percentage of the available drawing space.

getInternalStatus() - Method in class org.gcube.dataanalysis.ecoengine.interfaces.ActorNode

getInternalStatus() - Method in interface org.gcube.dataanalysis.ecoengine.interfaces.SpatialProbabilityDistributionGeneric

getInternalStatus() - Method in class org.gcube.dataanalysis.ecoengine.interfaces.SpatialProbabilityDistributionNode

getInternalStatus() - Method in interface org.gcube.dataanalysis.ecoengine.interfaces.SpatialProbabilityDistributionTable

getInternalStatus() - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.AquamapsNN

getInternalStatus() - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.AquamapsNNNS

getInternalStatus() - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.AquamapsNNSuitable

getInternalStatus() - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.AquamapsSuitable

getInternalStatus() - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.BayesianDistribution

getInternalStatus() - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.DummyAlgorithm

getInternalStatus() - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.TestAlgorithm

getInterpolatedTables() - Method in class org.gcube.dataanalysis.ecoengine.evaluation.bioclimate.InterpolateTables

getInverseEigenvalues() - Method in class org.gcube.dataanalysis.ecoengine.models.cores.pca.PrincipalComponentAnalysis

getInverseNormalizedEigenvalues() - Method in class org.gcube.dataanalysis.ecoengine.models.cores.pca.PrincipalComponentAnalysis

getJSonData(String, String, Type) - Static method in class org.gcube.contentmanagement.graphtools.utils.HttpRequest

getKDTree() - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Gets the KDTree class.

getKDTreeSpec() - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Gets the KDTree specification string, which contains the class name of the KDTree class and any options to the KDTree.

getLabel() - Method in class org.gcube.portlets.user.timeseries.charts.support.types.Point

getLabel() - Method in class org.gcube.portlets.user.timeseries.charts.support.types.ValueEntry

getLabelFont() - Method in class org.gcube.contentmanagement.graphtools.plotting.demo.SpiderWebPlot

Returns the series label font.

getLabelGenerator() - Method in class org.gcube.contentmanagement.graphtools.plotting.demo.SpiderWebPlot

Returns the label generator.

getLabelPaint() - Method in class org.gcube.contentmanagement.graphtools.plotting.demo.SpiderWebPlot

Returns the series label paint.

getLabelsfromIndexes(List<Point<? extends Number, ? extends Number>>, List<Integer>) - Static method in class org.gcube.contentmanagement.graphtools.data.conversions.GraphConverter2D

getLablesFromPoints(Point) - Static method in class org.gcube.contentmanagement.graphtools.data.conversions.GraphConverter2D

getLandDistance() - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.Hspen

getLayer() - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.Hspen

getLegendItems() - Method in class org.gcube.contentmanagement.graphtools.plotting.demo.SpiderWebPlot

Returns a collection of legend items for the radar chart.

getLegendItemShape() - Method in class org.gcube.contentmanagement.graphtools.plotting.demo.SpiderWebPlot

Returns the shape used for legend items.

getList() - Method in class org.gcube.dataanalysis.ecoengine.datatypes.ColumnTypesList

getList() - Method in class org.gcube.dataanalysis.ecoengine.datatypes.PrimitiveTypesList

getList() - Method in class org.gcube.dataanalysis.ecoengine.datatypes.StatisticalTypeList

getList() - Method in class org.gcube.dataanalysis.ecoengine.datatypes.TablesList

getListSeparator() - Static method in class org.gcube.dataanalysis.ecoengine.configuration.AlgorithmConfiguration

getLoad() - Method in interface org.gcube.dataanalysis.ecoengine.interfaces.Generator

getLoad() - Method in class org.gcube.dataanalysis.ecoengine.processing.LocalSimpleSplitGenerator

getLoad() - Method in class org.gcube.dataanalysis.ecoengine.processing.LocalSplitGenerator

getLoad() - Method in class org.gcube.dataanalysis.ecoengine.processing.RainyCloudGenerator

getLoad(int) - Static method in class org.gcube.dataanalysis.ecoengine.utils.ResourceFactory

getLogger() - Static method in class org.gcube.contentmanagement.lexicalmatcher.utils.AnalysisLogger

getMainInfoID(Object) - Method in interface org.gcube.dataanalysis.ecoengine.interfaces.SpatialProbabilityDistributionGeneric

getMainInfoID(Object) - Method in interface org.gcube.dataanalysis.ecoengine.interfaces.SpatialProbabilityDistributionTable

getMainInfoID(Object) - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.AquamapsSuitable

getMainInfoID(Object) - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.BayesianDistribution

getMainInfoID(Object) - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.DummyAlgorithm

getMainInfoID(Object) - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.TestAlgorithm

getMainInfoObjects() - Method in interface org.gcube.dataanalysis.ecoengine.interfaces.SpatialProbabilityDistributionGeneric

getMainInfoObjects() - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.BayesianDistribution

getMainInfoObjects() - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.DummyAlgorithm

getMainInfoObjects() - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.TestAlgorithm

getMainInfoQuery() - Method in interface org.gcube.dataanalysis.ecoengine.interfaces.SpatialProbabilityDistributionTable

getMainInfoQuery() - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.AquamapsSuitable

getMainInfoType() - Method in interface org.gcube.dataanalysis.ecoengine.interfaces.SpatialProbabilityDistributionGeneric

getMainInfoType() - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.BayesianDistribution

getMainInfoType() - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.DummyAlgorithm

getMainInfoType() - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.TestAlgorithm

getMax() - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.Envelope

getMax(double[]) - Static method in class org.gcube.dataanalysis.ecoengine.utils.Operations

getMax(int[]) - Static method in class org.gcube.dataanalysis.ecoengine.utils.Operations

getMaxCenterLat() - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.Coordinates

getMaxIterations() - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Gets the maximum number of iterations.

getMaxKMeans() - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Gets the maximum number of iterations in KMeans.

getMaxKMeansForChildren() - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Gets the maximum number of iterations in KMeans.

getMaxminLatTable() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.EngineConfiguration

getMaxNumClusters() - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Gets the maximum number of clusters to generate.

getMaxValue() - Method in class org.gcube.contentmanagement.graphtools.plotting.demo.SpiderWebPlot

Returns the maximum value any category axis can take.

getMaxY() - Method in class org.gcube.portlets.user.timeseries.charts.support.types.GraphData

getMeanDepth() - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.Hspen

getMin() - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.Envelope

getMin(int[]) - Static method in class org.gcube.dataanalysis.ecoengine.utils.Operations

getMin(double[]) - Static method in class org.gcube.dataanalysis.ecoengine.utils.Operations

getMinCenterLat() - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.Coordinates

getMinNumClusters() - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Gets the minimum number of clusters to generate.

getMinY() - Method in class org.gcube.portlets.user.timeseries.charts.support.types.GraphData

getModel() - Method in class org.gcube.dataanalysis.ecoengine.configuration.AlgorithmConfiguration

getModel() - Method in interface org.gcube.dataanalysis.ecoengine.interfaces.Modeler

getModel() - Method in class org.gcube.dataanalysis.ecoengine.modeling.SimpleModeler

getModel() - Method in class org.gcube.dataanalysis.ecoengine.models.cores.pca.PrincipalComponentAnalysis

getModeler(AlgorithmConfiguration) - Static method in class org.gcube.dataanalysis.ecoengine.processing.factories.ModelersFactory

getModelers(String) - Static method in class org.gcube.dataanalysis.ecoengine.processing.factories.ModelersFactory

getModelers(AlgorithmConfiguration) - Static method in class org.gcube.dataanalysis.ecoengine.processing.factories.ModelersFactory

getModelParameters(String, String) - Static method in class org.gcube.dataanalysis.ecoengine.processing.factories.ModelersFactory

getModels(String) - Static method in class org.gcube.dataanalysis.ecoengine.processing.factories.ModelersFactory

getMonoDimTable(String, String) - Method in interface org.gcube.contentmanagement.graphtools.abstracts.GenericDBExtractor

getMonoDimTable(String, String) - Method in class org.gcube.contentmanagement.graphtools.data.databases.CommonDBExtractor

getMultiDimTemporalTables(String, String, String, String, String, String...) - Method in interface org.gcube.contentmanagement.graphtools.abstracts.GenericDBExtractor

getMultiDimTemporalTables(List<Filter>, Filter, String, String, String, String, String, String...) - Method in class org.gcube.contentmanagement.graphtools.data.databases.CommonDBExtractor

getMultiDimTemporalTables(String, String, String, String, String, String...) - Method in class org.gcube.contentmanagement.graphtools.data.databases.CommonDBExtractor

getName() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.Category

getName() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.RelationEdge

getName() - Method in interface org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.interfaces.Reference

getName() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.graph.RelationEdge

getName() - Method in class org.gcube.dataanalysis.ecoengine.datatypes.StatisticalType

getName() - Method in interface org.gcube.dataanalysis.ecoengine.interfaces.GenericAlgorithm

getName() - Method in interface org.gcube.dataanalysis.ecoengine.interfaces.Model

getName() - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.Coordinates

getName() - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.Envelope

getName() - Method in class org.gcube.dataanalysis.ecoengine.models.FeedForwardNN

getName() - Method in class org.gcube.dataanalysis.ecoengine.models.ModelAquamapsNN

getName() - Method in class org.gcube.dataanalysis.ecoengine.models.ModelAquamapsNNNS

getName() - Method in class org.gcube.dataanalysis.ecoengine.models.ModelHSPEN

getName() - Method in class org.gcube.dataanalysis.ecoengine.models.testing.FeedForwardNNFile

getName() - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.AquamapsNative

getName() - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.AquamapsNative2050

getName() - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.AquamapsNN

getName() - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.AquamapsNNNS

getName() - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.AquamapsNNSuitable

getName() - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.AquamapsSuitable

getName() - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.AquamapsSuitable2050

getName() - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.DummyAlgorithm

getName() - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.FeedForwardNeuralNetworkDistribution

getName() - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.TestAlgorithm

getName() - Method in class org.gcube.portlets.user.timeseries.charts.support.tablemodel.TableDescr

getNameHuman() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.LexicalEngineConfiguration

getNegativeCase() - Method in class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.Neural_Network

getNegativeCase() - Method in class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.neurosolutions.NeuralNet

getNextChunkSet() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.chunks.SetOfReferenceChunkSet

getNextDebugVectorsInstance(Instances) - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Read an instance from debug vectors file.

getNMostLat() - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.Coordinates

getNormalizedEigenvalues() - Method in class org.gcube.dataanalysis.ecoengine.models.cores.pca.PrincipalComponentAnalysis

getNumber(Object[], int) - Static method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.AquamapsEnvelopeAlgorithm

getNumber(Object[], int) - Static method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.AquamapsAlgorithmCore

getNumberOfElements() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.Category

getNumberOfElements() - Method in interface org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.interfaces.Reference

getNumberOfEntries() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.chunks.ChunkSet

getNumberOfGeoInfo() - Method in class org.gcube.dataanalysis.ecoengine.interfaces.SpatialProbabilityDistributionNode

getNumberOfInputs() - Method in class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.Neural_Network

getNumberOfLeftElements() - Method in class org.gcube.dataanalysis.ecoengine.interfaces.ActorNode

getNumberOfOutputs() - Method in class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.Neural_Network

getNumberOfProcessedSpecies() - Method in class org.gcube.dataanalysis.ecoengine.interfaces.SpatialProbabilityDistributionNode

getNumberOfResources() - Method in class org.gcube.dataanalysis.ecoengine.configuration.AlgorithmConfiguration

getNumberOfRightElements() - Method in class org.gcube.dataanalysis.ecoengine.interfaces.ActorNode

getNumberOfSpecies() - Method in class org.gcube.dataanalysis.ecoengine.interfaces.SpatialProbabilityDistributionNode

getNumberOfThreads() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.EngineConfiguration

getNumberOfThreadsToUse() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.LexicalEngineConfiguration

getNumLeftObjects() - Method in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsMerger

getNumOfAttributes() - Method in class org.gcube.contentmanagement.graphtools.abstracts.SamplesTable

getNumOfAttributes() - Method in class org.gcube.contentmanagement.graphtools.data.BigSamplesTable

getNumOfAttributes() - Method in class org.gcube.contentmanagement.graphtools.data.GraphSamplesTable

getNumOfDataRows() - Method in class org.gcube.contentmanagement.graphtools.abstracts.SamplesTable

getNumOfDataRows() - Method in class org.gcube.contentmanagement.graphtools.data.BigSamplesTable

getNumOfDataRows() - Method in class org.gcube.contentmanagement.graphtools.data.GraphSamplesTable

getNumRightObjects() - Method in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsMerger

getObjectFromFile(String) - Static method in class org.gcube.dataanalysis.ecoengine.utils.Transformations

getOccurrenceCellsTable() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.EngineConfiguration

getOccurrenceMap() - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.OccurrencePointSets

getOptions() - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Gets the current settings of SimpleKMeans.

getOrderedElements(String, String, String) - Static method in class org.gcube.dataanalysis.ecoengine.utils.DatabaseUtils

getOrderedList() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.CategoryOrderedList

getOriginHspenTable() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.EngineConfiguration

getOutput() - Method in class org.gcube.dataanalysis.ecoengine.clustering.DBScan

getOutput() - Method in class org.gcube.dataanalysis.ecoengine.evaluation.DistributionQualityAnalysis

getOutput() - Method in class org.gcube.dataanalysis.ecoengine.evaluation.HabitatRepresentativeness

getOutput() - Method in interface org.gcube.dataanalysis.ecoengine.interfaces.ComputationalAgent

getOutput() - Method in class org.gcube.dataanalysis.ecoengine.interfaces.DataAnalysis

getOutput() - Method in interface org.gcube.dataanalysis.ecoengine.interfaces.GenericAlgorithm

getOutput() - Method in interface org.gcube.dataanalysis.ecoengine.interfaces.Model

getOutput() - Method in class org.gcube.dataanalysis.ecoengine.modeling.SimpleModeler

getOutput() - Method in class org.gcube.dataanalysis.ecoengine.models.ModelAquamapsNN

getOutput() - Method in class org.gcube.dataanalysis.ecoengine.models.ModelAquamapsNNNS

getOutput() - Method in class org.gcube.dataanalysis.ecoengine.models.ModelHSPEN

getOutput() - Method in class org.gcube.dataanalysis.ecoengine.models.testing.FeedForwardNNFile

getOutput() - Method in class org.gcube.dataanalysis.ecoengine.processing.LocalSimpleSplitGenerator

getOutput() - Method in class org.gcube.dataanalysis.ecoengine.processing.LocalSplitGenerator

getOutput() - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.AquamapsSuitable

getOutput() - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.BayesianDistribution

getOutput() - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.DummyAlgorithm

getOutput() - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.TestAlgorithm

getOutput() - Method in class org.gcube.dataanalysis.ecoengine.transducers.BioClimateHSPECTransducer

getOutput() - Method in class org.gcube.dataanalysis.ecoengine.transducers.InterpolationTransducer

getOutput() - Method in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsMerger

getOutput() - Method in class org.gcube.dataanalysis.ecoengine.transducers.QueryExecutor

getOutput() - Method in class org.gcube.dataanalysis.ecoengine.transducers.simplequeryexecutors.HcafFilter

getOutput() - Method in class org.gcube.dataanalysis.ecoengine.transducers.simplequeryexecutors.HspenFilter

getOutput() - Method in class org.gcube.dataanalysis.ecoengine.transducers.simplequeryexecutors.MarineAbsencePointsFromAquamapsDistribution

getOutput() - Method in class org.gcube.dataanalysis.ecoengine.transducers.simplequeryexecutors.MarinePresencePoints

getOutput() - Method in class org.gcube.dataanalysis.ecoengine.transducers.TestTrans

getOutputCenterFile() - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Gets the file to write the list of centers to.

getOutputParameters() - Method in class org.gcube.dataanalysis.ecoengine.evaluation.DistributionQualityAnalysis

getOutputParameters() - Method in class org.gcube.dataanalysis.ecoengine.evaluation.HabitatRepresentativeness

getOverallResourceLoad(List<String>) - Static method in class org.gcube.dataanalysis.ecoengine.utils.ResourceFactory

getOverallResources(List<String>) - Static method in class org.gcube.dataanalysis.ecoengine.utils.ResourceFactory

getParam(String) - Method in class org.gcube.dataanalysis.ecoengine.configuration.AlgorithmConfiguration

getParameters(String, String) - Static method in class org.gcube.dataanalysis.ecoengine.processing.factories.ProcessorsFactory

getPattern(String) - Static method in class org.gcube.contentmanagement.graphtools.utils.DateGuesser

getPattern(String, String) - Static method in class org.gcube.contentmanagement.graphtools.utils.DateGuesser

getPCA(double[][]) - Method in class org.gcube.dataanalysis.ecoengine.models.cores.pca.PrincipalComponentAnalysis

getPersistencePath() - Method in class org.gcube.dataanalysis.ecoengine.configuration.AlgorithmConfiguration

getPlotType() - Method in class org.gcube.contentmanagement.graphtools.plotting.demo.SpiderWebPlot

Returns a short string describing the type of plot.

getPlotValue(int, int) - Method in class org.gcube.contentmanagement.graphtools.plotting.demo.SpiderWebPlot

Returns the value to be plotted at the interseries of the series and the category.

getPositiveCase() - Method in class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.Neural_Network

getPositiveCase() - Method in class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.neurosolutions.NeuralNet

getPrefmax() - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.Envelope

getPrefmin() - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.Envelope

getPrimaryKey() - Method in class org.gcube.dataanalysis.ecoengine.utils.DatabaseUtils

getPrimaryProduction() - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.Hspen

getProbabilityDistributionAlgorithms(String) - Static method in class org.gcube.dataanalysis.ecoengine.processing.factories.GeneratorsFactory

getProcessor(AlgorithmConfiguration, String) - Static method in class org.gcube.dataanalysis.ecoengine.processing.factories.ProcessorsFactory

getProcessor(AlgorithmConfiguration, String, String) - Static method in class org.gcube.dataanalysis.ecoengine.processing.factories.ProcessorsFactory

getProducedImages() - Method in class org.gcube.dataanalysis.ecoengine.evaluation.bioclimate.BioClimateAnalysis

getProperties(String) - Static method in class org.gcube.dataanalysis.ecoengine.configuration.AlgorithmConfiguration

getProperties() - Method in interface org.gcube.dataanalysis.ecoengine.interfaces.GenericAlgorithm

getProperties() - Method in interface org.gcube.dataanalysis.ecoengine.interfaces.Model

getProperties() - Method in interface org.gcube.dataanalysis.ecoengine.interfaces.SpatialProbabilityDistributionTable

getProperties() - Method in class org.gcube.dataanalysis.ecoengine.models.ModelAquamapsNN

getProperties() - Method in class org.gcube.dataanalysis.ecoengine.models.ModelAquamapsNNNS

getProperties() - Method in class org.gcube.dataanalysis.ecoengine.models.ModelHSPEN

getProperties() - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.AquamapsNative

getProperties() - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.AquamapsNNSuitable

getProperties() - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.AquamapsSuitable

getProperties() - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.AquamapsSuitable2050

getProperties() - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.BayesianDistribution

getProperties() - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.DummyAlgorithm

getProperties() - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.TestAlgorithm

getRawName() - Method in class org.gcube.portlets.user.timeseries.charts.support.tablemodel.FieldDescr

getReferenceChunksToTake() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.LexicalEngineConfiguration

getReferenceColumn() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.LexicalEngineConfiguration

getReferenceEntries() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.chunks.ReferenceChunk

getReferenceTable() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.LexicalEngineConfiguration

getRemoteCalculator() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.EngineConfiguration

getRemoteEnvironment() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.EngineConfiguration

getResourceLoad() - Method in class org.gcube.dataanalysis.ecoengine.clustering.DBScan

getResourceLoad() - Method in class org.gcube.dataanalysis.ecoengine.clustering.KMeans

getResourceLoad() - Method in interface org.gcube.dataanalysis.ecoengine.interfaces.ComputationalAgent

getResourceLoad() - Method in class org.gcube.dataanalysis.ecoengine.interfaces.DataAnalysis

calculates the number of processed records per unity of time: the timing is calculated internally by the resourceManager and used when the method is interrogated

getResourceLoad() - Method in interface org.gcube.dataanalysis.ecoengine.interfaces.Model

getResourceLoad() - Method in class org.gcube.dataanalysis.ecoengine.modeling.SimpleModeler

getResourceLoad() - Method in class org.gcube.dataanalysis.ecoengine.models.ModelAquamapsNN

getResourceLoad() - Method in class org.gcube.dataanalysis.ecoengine.models.ModelAquamapsNNNS

getResourceLoad() - Method in class org.gcube.dataanalysis.ecoengine.models.ModelHSPEN

getResourceLoad() - Method in class org.gcube.dataanalysis.ecoengine.processing.LocalSimpleSplitGenerator

getResourceLoad() - Method in class org.gcube.dataanalysis.ecoengine.processing.LocalSplitGenerator

getResourceLoad() - Method in class org.gcube.dataanalysis.ecoengine.processing.RainyCloudGenerator

getResourceLoad() - Method in class org.gcube.dataanalysis.ecoengine.transducers.BioClimateHSPECTransducer

getResourceLoad() - Method in class org.gcube.dataanalysis.ecoengine.transducers.InterpolationTransducer

getResourceLoad() - Method in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsMerger

getResourceLoad() - Method in class org.gcube.dataanalysis.ecoengine.transducers.QueryExecutor

getResourceLoad() - Method in class org.gcube.dataanalysis.ecoengine.transducers.TestTrans

getResourceLoad(int) - Method in class org.gcube.dataanalysis.ecoengine.utils.ResourceFactory

getResources() - Method in class org.gcube.dataanalysis.ecoengine.clustering.DBScan

getResources() - Method in class org.gcube.dataanalysis.ecoengine.clustering.KMeans

getResources() - Method in interface org.gcube.dataanalysis.ecoengine.interfaces.ComputationalAgent

getResources() - Method in class org.gcube.dataanalysis.ecoengine.interfaces.DataAnalysis

gets the occupancy of the resource: in this case one thread

getResources() - Method in interface org.gcube.dataanalysis.ecoengine.interfaces.Model

getResources() - Method in class org.gcube.dataanalysis.ecoengine.modeling.SimpleModeler

getResources() - Method in class org.gcube.dataanalysis.ecoengine.models.ModelAquamapsNN

getResources() - Method in class org.gcube.dataanalysis.ecoengine.models.ModelAquamapsNNNS

getResources() - Method in class org.gcube.dataanalysis.ecoengine.models.ModelHSPEN

getResources() - Method in class org.gcube.dataanalysis.ecoengine.processing.LocalSimpleSplitGenerator

getResources() - Method in class org.gcube.dataanalysis.ecoengine.processing.LocalSplitGenerator

getResources() - Method in class org.gcube.dataanalysis.ecoengine.processing.RainyCloudGenerator

getResources() - Method in class org.gcube.dataanalysis.ecoengine.transducers.BioClimateHSPECTransducer

getResources() - Method in class org.gcube.dataanalysis.ecoengine.transducers.InterpolationTransducer

getResources() - Method in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsMerger

getResources() - Method in class org.gcube.dataanalysis.ecoengine.transducers.QueryExecutor

getResources() - Method in class org.gcube.dataanalysis.ecoengine.transducers.TestTrans

getResources(float...) - Static method in class org.gcube.dataanalysis.ecoengine.utils.ResourceFactory

getRevision() - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Returns the revision string.

getSalinity() - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.Hspen

getSamples() - Method in class org.gcube.dataanalysis.ecoengine.clustering.DBScan

getScore(String, boolean) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.CategoryScores

getScore(String) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.CategoryScores

getScore(String) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.CategoryScoresOld

getScore() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.SingleResult

getScoresTable() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.CategoryOrderedList

getSecondElement() - Method in class org.gcube.contentmanagement.graphtools.core.filters.Filter

getSecondNumber() - Method in class org.gcube.contentmanagement.graphtools.core.filters.Filter

getSeriesColumn() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.chunks.ChunkSet

getSeriesName() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.chunks.ChunkSet

getSeriesOutlinePaint() - Method in class org.gcube.contentmanagement.graphtools.plotting.demo.SpiderWebPlot

Returns the outline paint for ALL series in the plot.

getSeriesOutlinePaint(int) - Method in class org.gcube.contentmanagement.graphtools.plotting.demo.SpiderWebPlot

Returns the paint for the specified series.

getSeriesOutlineStroke() - Method in class org.gcube.contentmanagement.graphtools.plotting.demo.SpiderWebPlot

Returns the outline stroke for ALL series in the plot.

getSeriesOutlineStroke(int) - Method in class org.gcube.contentmanagement.graphtools.plotting.demo.SpiderWebPlot

Returns the stroke for the specified series.

getSeriesPaint() - Method in class org.gcube.contentmanagement.graphtools.plotting.demo.SpiderWebPlot

Returns the paint for ALL series in the plot.

getSeriesPaint(int) - Method in class org.gcube.contentmanagement.graphtools.plotting.demo.SpiderWebPlot

Returns the paint for the specified series.

getServiceParameter() - Method in class org.gcube.dataanalysis.ecoengine.datatypes.ServiceType

getServiceUserName() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.EngineConfiguration

getSimpleScore(String) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.CategoryScores

getSingleEntryRecognitionMaxDeviation() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.LexicalEngineConfiguration

getSingletonElement() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.Engine

getSingletonEntry() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.chunks.TimeSeriesChunk

getSingletonMatches() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.Engine

getSMostLat() - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.Coordinates

getSpeciesID() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.EngineConfiguration

getSpeciesID() - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.Hspen

getSpeciesID() - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.OccurrencePoint

getSpeciesProb(Object[], Object[]) - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.AquamapsAlgorithmCore

getStartAngle() - Method in class org.gcube.contentmanagement.graphtools.plotting.demo.SpiderWebPlot

Returns the start angle for the first radar axis.

getStationaryPoints(GraphData) - Static method in class org.gcube.contentmanagement.graphtools.data.conversions.GraphConverter2D

getStatus() - Method in class org.gcube.dataanalysis.ecoengine.clustering.DBScan

getStatus() - Method in class org.gcube.dataanalysis.ecoengine.evaluation.bioclimate.BioClimateAnalysis

getStatus() - Method in class org.gcube.dataanalysis.ecoengine.evaluation.bioclimate.InterpolateTables

getStatus() - Method in class org.gcube.dataanalysis.ecoengine.evaluation.HabitatRepresentativeness

getStatus() - Method in interface org.gcube.dataanalysis.ecoengine.interfaces.ComputationalAgent

getStatus() - Method in class org.gcube.dataanalysis.ecoengine.interfaces.DataAnalysis

gets the internal status of the operation

getStatus() - Method in interface org.gcube.dataanalysis.ecoengine.interfaces.Model

getStatus() - Method in class org.gcube.dataanalysis.ecoengine.modeling.SimpleModeler

getstatus() - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.MaxMinGenerator

getStatus() - Method in class org.gcube.dataanalysis.ecoengine.models.FeedForwardNN

getStatus() - Method in class org.gcube.dataanalysis.ecoengine.models.ModelAquamapsNN

getStatus() - Method in class org.gcube.dataanalysis.ecoengine.models.ModelAquamapsNNNS

getStatus() - Method in class org.gcube.dataanalysis.ecoengine.models.ModelHSPEN

getStatus() - Method in class org.gcube.dataanalysis.ecoengine.models.testing.FeedForwardNNFile

getStatus() - Method in class org.gcube.dataanalysis.ecoengine.processing.LocalSimpleSplitGenerator

getStatus() - Method in class org.gcube.dataanalysis.ecoengine.processing.LocalSplitGenerator

getStatus() - Method in class org.gcube.dataanalysis.ecoengine.processing.RainyCloudGenerator

getStatus() - Method in class org.gcube.dataanalysis.ecoengine.transducers.BioClimateHSPECTransducer

getStatus() - Method in class org.gcube.dataanalysis.ecoengine.transducers.InterpolationTransducer

getStatus() - Method in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsMerger

getStatus() - Method in class org.gcube.dataanalysis.ecoengine.transducers.QueryExecutor

getStatus() - Method in class org.gcube.dataanalysis.ecoengine.transducers.TestTrans

getStringScore() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.SingleResult

getSupportedAlgorithms() - Method in interface org.gcube.dataanalysis.ecoengine.interfaces.Generator

getSupportedAlgorithms() - Method in class org.gcube.dataanalysis.ecoengine.processing.LocalSimpleSplitGenerator

getSupportedAlgorithms() - Method in class org.gcube.dataanalysis.ecoengine.processing.LocalSplitGenerator

getSupportedAlgorithms() - Method in class org.gcube.dataanalysis.ecoengine.processing.RainyCloudGenerator

getSupportedModels() - Method in interface org.gcube.dataanalysis.ecoengine.interfaces.Modeler

getSupportedModels() - Method in class org.gcube.dataanalysis.ecoengine.modeling.SimpleModeler

getTabelName() - Method in class org.gcube.dataanalysis.ecoengine.datatypes.ColumnTypesList

getTableName() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.Category

getTablename() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.SingleResult

getTableName() - Method in interface org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.interfaces.Reference

getTableName() - Method in class org.gcube.dataanalysis.ecoengine.datatypes.ColumnType

getTableName() - Method in class org.gcube.dataanalysis.ecoengine.datatypes.InputTable

getTableName() - Method in class org.gcube.dataanalysis.ecoengine.datatypes.OutputTable

getTableSpace() - Method in class org.gcube.dataanalysis.ecoengine.configuration.AlgorithmConfiguration

getTableStore() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.EngineConfiguration

getTechnicalInformation() - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Returns an instance of a TechnicalInformation object, containing detailed information about the technical background of this class, e.g., paper reference or book this class is based on.

getTemperature() - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.Hspen

getTemplateNames() - Method in class org.gcube.dataanalysis.ecoengine.datatypes.InputTable

getTemplates() - Method in class org.gcube.dataanalysis.ecoengine.datatypes.TablesList

getTimeSeriesChunksToTake() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.LexicalEngineConfiguration

getTo() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.RelationEdge

getTo() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.graph.RelationEdge

getToolTipGenerator() - Method in class org.gcube.contentmanagement.graphtools.plotting.demo.SpiderWebPlot

Returns the tool tip generator for the plot.

getTrainingConfig(String, String, String, String, String, String, String) - Static method in class org.gcube.dataanalysis.ecoengine.user.ModelerT

getTrainingConfigHSPEN(String, String, String, String, String, String) - Static method in class org.gcube.dataanalysis.ecoengine.user.ModelerT

getTransducerer(AlgorithmConfiguration) - Static method in class org.gcube.dataanalysis.ecoengine.processing.factories.TransducerersFactory

getTransducerers(AlgorithmConfiguration) - Static method in class org.gcube.dataanalysis.ecoengine.processing.factories.TransducerersFactory

getTransducerParameters(String, String) - Static method in class org.gcube.dataanalysis.ecoengine.processing.factories.TransducerersFactory

getType() - Method in class org.gcube.dataanalysis.ecoengine.datatypes.PrimitiveType

getType() - Method in class org.gcube.dataanalysis.ecoengine.datatypes.PrimitiveTypesList

getTypeName() - Method in enum org.gcube.portlets.user.timeseries.charts.support.tablemodel.FieldType

getTypes() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.Entry

getURLGenerator() - Method in class org.gcube.contentmanagement.graphtools.plotting.demo.SpiderWebPlot

Returns the URL generator for the plot.

getUseKDTree() - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Gets whether the KDTree is used or not.

getValue(int, int) - Method in class org.gcube.contentmanagement.graphtools.abstracts.SamplesTable

getValue(int, int) - Method in class org.gcube.contentmanagement.graphtools.data.BigSamplesTable

getValue(int, int) - Method in class org.gcube.contentmanagement.graphtools.data.GraphSamplesTable

getValue() - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.OccurrencePoint

getValue() - Method in class org.gcube.portlets.user.timeseries.charts.support.types.Point

getValue() - Method in class org.gcube.portlets.user.timeseries.charts.support.types.ValueEntry

getVersion() - Method in interface org.gcube.dataanalysis.ecoengine.interfaces.Model

getVersion() - Method in class org.gcube.dataanalysis.ecoengine.models.ModelAquamapsNN

getVersion() - Method in class org.gcube.dataanalysis.ecoengine.models.ModelAquamapsNNNS

getVersion() - Method in class org.gcube.dataanalysis.ecoengine.models.ModelHSPEN

getWebPoint(Rectangle2D, double, double) - Method in class org.gcube.contentmanagement.graphtools.plotting.demo.SpiderWebPlot

Returns a cartesian point from a polar angle, length and bounding box

getWeigth() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.RelationEdge

getWeigth() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.graph.RelationEdge

getWMostLong() - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.Coordinates

getWriteSummaryLog() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.EngineConfiguration

globalEvolutionAnalysis(String[], String[], String[], String[], String, String, float) - Method in class org.gcube.dataanalysis.ecoengine.evaluation.bioclimate.BioClimateAnalysis

Generates a chart for each hspec feature Generates a chart for hspec prob > thr and performs a discrepancy analysis on hspec

globalInfo() - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Returns a string describing this clusterer.

go() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.graph.GraphFramer

granularity(String) - Static method in class org.gcube.contentmanagement.graphtools.utils.DateGuesser

GraphConverter2D - Class in org.gcube.contentmanagement.graphtools.data.conversions

GraphConverter2D() - Constructor for class org.gcube.contentmanagement.graphtools.data.conversions.GraphConverter2D

GraphData - Class in org.gcube.portlets.user.timeseries.charts.support.types

All the data needed to represent a single graph.

GraphData(List<Point<? extends Number, ? extends Number>>, boolean) - Constructor for class org.gcube.portlets.user.timeseries.charts.support.types.GraphData

GraphDisplayer - Class in org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.graph

GraphDisplayer() - Constructor for class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.graph.GraphDisplayer

graphDisplayer - Variable in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.graph.GraphFramer

GraphFramer - Class in org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.graph

GraphFramer(String) - Constructor for class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.graph.GraphFramer

GraphGeneratorApplet - Class in org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.graph

GraphGeneratorApplet() - Constructor for class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.graph.GraphGeneratorApplet

GraphGroups - Class in org.gcube.portlets.user.timeseries.charts.support.types

GraphGroups() - Constructor for class org.gcube.portlets.user.timeseries.charts.support.types.GraphGroups

graphs2Normals(GraphGroups) - Static method in class org.gcube.contentmanagement.graphtools.plotting.graphs.GaussianDistributionGraph

GraphSamplesTable - Class in org.gcube.contentmanagement.graphtools.data

GraphSamplesTable(List<Point<? extends Number, ? extends Number>>) - Constructor for class org.gcube.contentmanagement.graphtools.data.GraphSamplesTable

GraphSamplesTable() - Constructor for class org.gcube.contentmanagement.graphtools.data.GraphSamplesTable

GraphSamplesTable(String, List<String>, List<Double>, boolean) - Constructor for class org.gcube.contentmanagement.graphtools.data.GraphSamplesTable

griglia - Variable in class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.Neural_Network

GroupingFactor - Static variable in class org.gcube.dataanalysis.ecoengine.spatialdistributions.BayesianDistribution

groupingFactor - Variable in class org.gcube.dataanalysis.ecoengine.spatialdistributions.BayesianDistribution

guessType(String) - Static method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.DataTypeRecognizer

guessType(ArrayList<String>) - Static method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.DataTypeRecognizer

H

HabitatRepresentativeness - Class in org.gcube.dataanalysis.ecoengine.evaluation

HabitatRepresentativeness() - Constructor for class org.gcube.dataanalysis.ecoengine.evaluation.HabitatRepresentativeness

HandleEvent(Event) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.graph.GraphFramer

hasAlpha(Image) - Static method in class org.gcube.contentmanagement.graphtools.data.conversions.ImageTools

hcafEvolutionAnalysis(String[], String[]) - Method in class org.gcube.dataanalysis.ecoengine.evaluation.bioclimate.BioClimateAnalysis

HcafFilter - Class in org.gcube.dataanalysis.ecoengine.transducers.simplequeryexecutors

HcafFilter() - Constructor for class org.gcube.dataanalysis.ecoengine.transducers.simplequeryexecutors.HcafFilter

hcafTableName - Variable in class org.gcube.dataanalysis.ecoengine.connectors.RemoteHspecInputObject

headPercent - Variable in class org.gcube.contentmanagement.graphtools.plotting.demo.SpiderWebPlot

The head radius as a percentage of the available drawing area.

HEIGHT - Static variable in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.graph.GraphDisplayer

HEIGHTBOX - Static variable in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.graph.GraphDisplayer

HiddenBatchTrain(double) - Method in class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.neurosolutions.Neuron

HiddenIncrementalTrain(double) - Method in class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.neurosolutions.Neuron

HistogramGraph - Class in org.gcube.contentmanagement.graphtools.plotting.graphs

HistogramGraph(String) - Constructor for class org.gcube.contentmanagement.graphtools.plotting.graphs.HistogramGraph

hspecDestinationTableName - Variable in class org.gcube.dataanalysis.ecoengine.connectors.RemoteHspecInputObject

HspecDiscrepanciesCalculator - Class in org.gcube.dataanalysis.ecoengine.utils

checks if two tables are equal checks numbers at the second decimal position

HspecDiscrepanciesCalculator(AlgorithmConfiguration) - Constructor for class org.gcube.dataanalysis.ecoengine.utils.HspecDiscrepanciesCalculator

hspecEvolutionAnalysis(String[], String[], String, String, float) - Method in class org.gcube.dataanalysis.ecoengine.evaluation.bioclimate.BioClimateAnalysis

Hspen - Class in org.gcube.dataanalysis.ecoengine.models.cores.aquamaps

Hspen() - Constructor for class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.Hspen

hspen2ObjectArray(Hspen) - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.AquamapsEnvelopeAlgorithm

HspenFilter - Class in org.gcube.dataanalysis.ecoengine.transducers.simplequeryexecutors

HspenFilter() - Constructor for class org.gcube.dataanalysis.ecoengine.transducers.simplequeryexecutors.HspenFilter

hspenTableName - Variable in class org.gcube.dataanalysis.ecoengine.connectors.RemoteHspecInputObject

HttpRequest - Class in org.gcube.contentmanagement.graphtools.utils

HttpRequest() - Constructor for class org.gcube.contentmanagement.graphtools.utils.HttpRequest

I

id - Variable in class org.gcube.dataanalysis.ecoengine.connectors.RemoteHspecInputObject

id - Variable in class org.gcube.dataanalysis.ecoengine.connectors.RemoteHspecOutputObject

id - Variable in class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.neurosolutions.Neuron

idColumn - Variable in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.LexicalEngineConfiguration

ImageTools - Class in org.gcube.contentmanagement.graphtools.data.conversions

ImageTools() - Constructor for class org.gcube.contentmanagement.graphtools.data.conversions.ImageTools

IncrementalTrain(double, Pattern) - Method in class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.neurosolutions.NeuralNet

IncrementalTrainPatterns(Pattern[], double) - Method in class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.neurosolutions.NeuralNet

incrementAvg(double, double, int) - Static method in class org.gcube.contentmanagement.lexicalmatcher.utils.MathFunctions

incrementPerc(float, float, int) - Static method in class org.gcube.contentmanagement.graphtools.utils.MathFunctions

incrementPerc(float, float, int) - Static method in class org.gcube.contentmanagement.lexicalmatcher.utils.MathFunctions

incrementScore(String, float, boolean) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.CategoryScores

incrementScore(String, float) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.CategoryScoresOld

indexString(String) - Static method in class org.gcube.dataanalysis.ecoengine.utils.Transformations

INFRASTRUCTURE - Enum in org.gcube.dataanalysis.ecoengine.configuration

init(String) - Method in class org.gcube.contentmanagement.graphtools.core.StatisticsGenerator

init(String, LexicalEngineConfiguration) - Method in class org.gcube.contentmanagement.graphtools.core.StatisticsGenerator

init() - Method in class org.gcube.contentmanagement.graphtools.examples.graphsTypes.ExampleImage

init() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.graph.GraphDisplayer

init() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.graph.GraphGeneratorApplet

init(String, String, LexicalEngineConfiguration) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.run.CategoryGuesser

init(String, String) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.run.CategoryGuesser

init(LexicalEngineConfiguration) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.run.CategoryGuesser

init() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.run.CategoryGuesser

init() - Method in class org.gcube.dataanalysis.ecoengine.clustering.DBScan

init() - Method in interface org.gcube.dataanalysis.ecoengine.interfaces.ComputationalAgent

init() - Method in class org.gcube.dataanalysis.ecoengine.interfaces.DataAnalysis

init(AlgorithmConfiguration, Model) - Method in interface org.gcube.dataanalysis.ecoengine.interfaces.Model

init(AlgorithmConfiguration) - Method in interface org.gcube.dataanalysis.ecoengine.interfaces.SpatialProbabilityDistributionGeneric

init(AlgorithmConfiguration, SessionFactory) - Method in interface org.gcube.dataanalysis.ecoengine.interfaces.SpatialProbabilityDistributionTable

init() - Method in class org.gcube.dataanalysis.ecoengine.modeling.SimpleModeler

init(int[], double[], char[], double[], double[], Randomizer) - Method in class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.neurosolutions.NeuralNet

init(AlgorithmConfiguration) - Method in class org.gcube.dataanalysis.ecoengine.models.cores.pca.PrincipalComponentAnalysis

init(AlgorithmConfiguration, Model) - Method in class org.gcube.dataanalysis.ecoengine.models.FeedForwardNN

init(AlgorithmConfiguration, Model) - Method in class org.gcube.dataanalysis.ecoengine.models.ModelAquamapsNN

init(AlgorithmConfiguration, Model) - Method in class org.gcube.dataanalysis.ecoengine.models.ModelAquamapsNNNS

init(AlgorithmConfiguration, Model) - Method in class org.gcube.dataanalysis.ecoengine.models.ModelHSPEN

init(AlgorithmConfiguration, Model) - Method in class org.gcube.dataanalysis.ecoengine.models.testing.FeedForwardNNFile

init() - Method in class org.gcube.dataanalysis.ecoengine.processing.LocalSimpleSplitGenerator

init() - Method in class org.gcube.dataanalysis.ecoengine.processing.LocalSplitGenerator

init() - Method in class org.gcube.dataanalysis.ecoengine.processing.RainyCloudGenerator

init(AlgorithmConfiguration, SessionFactory) - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.AquamapsNative2050

init(AlgorithmConfiguration, SessionFactory) - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.AquamapsNN

init(AlgorithmConfiguration, SessionFactory) - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.AquamapsNNNS

init(AlgorithmConfiguration, SessionFactory) - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.AquamapsNNSuitable

init(AlgorithmConfiguration, SessionFactory) - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.AquamapsSuitable

init(AlgorithmConfiguration, SessionFactory) - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.AquamapsSuitable2050

init(AlgorithmConfiguration) - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.BayesianDistribution

init(AlgorithmConfiguration) - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.DummyAlgorithm

init(AlgorithmConfiguration) - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.TestAlgorithm

init() - Method in class org.gcube.dataanalysis.ecoengine.transducers.BioClimateHCAFTransducer

init() - Method in class org.gcube.dataanalysis.ecoengine.transducers.BioClimateHSPECTransducer

init() - Method in class org.gcube.dataanalysis.ecoengine.transducers.BioClimateHSPENTransducer

init() - Method in class org.gcube.dataanalysis.ecoengine.transducers.InterpolationTransducer

init() - Method in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsDuplicatesDeleter

init() - Method in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsInSeaOnEarth

init() - Method in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsMerger

init() - Method in class org.gcube.dataanalysis.ecoengine.transducers.QueryExecutor

init() - Method in class org.gcube.dataanalysis.ecoengine.transducers.simplequeryexecutors.HcafFilter

init() - Method in class org.gcube.dataanalysis.ecoengine.transducers.simplequeryexecutors.HspenFilter

init() - Method in class org.gcube.dataanalysis.ecoengine.transducers.simplequeryexecutors.MarineAbsencePointsFromAquamapsDistribution

init() - Method in class org.gcube.dataanalysis.ecoengine.transducers.simplequeryexecutors.MarinePresencePoints

init() - Method in class org.gcube.dataanalysis.ecoengine.transducers.TestTrans

init(AlgorithmConfiguration) - Method in class org.gcube.dataanalysis.ecoengine.utils.TrainingSetsGenerator

initAssignments(int[]) - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Set array of int, used to store assignments, to -1.

initAssignments(int) - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Creates and initializes integer array, used to store assignments.

initDB(boolean) - Method in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsMerger

initDBConnection(String) - Static method in class org.gcube.contentmanagement.lexicalmatcher.utils.DatabaseFactory

initDBConnection(String, LexicalEngineConfiguration) - Static method in class org.gcube.contentmanagement.lexicalmatcher.utils.DatabaseFactory

initDBConnection(String) - Static method in class org.gcube.dataanalysis.ecoengine.utils.DatabaseFactory

initDBConnection(String, LexicalEngineConfiguration) - Static method in class org.gcube.dataanalysis.ecoengine.utils.DatabaseFactory

initDBSession() - Method in class org.gcube.dataanalysis.ecoengine.processing.LocalSplitGenerator

initDBSession(AlgorithmConfiguration) - Static method in class org.gcube.dataanalysis.ecoengine.utils.DatabaseUtils

initDebugVectorsInput() - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Initialises the debug vector input.

initializeThreads(int) - Method in class org.gcube.dataanalysis.ecoengine.models.ModelHSPEN

initializeThreads() - Method in class org.gcube.dataanalysis.ecoengine.processing.LocalSimpleSplitGenerator

initializeThreads() - Method in class org.gcube.dataanalysis.ecoengine.processing.LocalSplitGenerator

initModel() - Method in class org.gcube.dataanalysis.ecoengine.processing.LocalSimpleSplitGenerator

initrapidminer - Variable in class org.gcube.dataanalysis.ecoengine.clustering.DBScan

initRapidMiner() - Method in class org.gcube.dataanalysis.ecoengine.configuration.AlgorithmConfiguration

initSingleMatcher(LexicalEngineConfiguration, String) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.run.CategoryGuesser

initSingleNode(AlgorithmConfiguration) - Method in class org.gcube.dataanalysis.ecoengine.interfaces.ActorNode

initSingleNode(AlgorithmConfiguration) - Method in class org.gcube.dataanalysis.ecoengine.interfaces.SpatialProbabilityDistributionNode

innermodel - Variable in class org.gcube.dataanalysis.ecoengine.modeling.SimpleModeler

Input - Variable in class org.gcube.dataanalysis.ecoengine.modeling.SimpleModeler

input - Variable in class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.neurosolutions.Pattern

inputCenterFileTipText() - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Returns the tip text for this property.

InputTable - Class in org.gcube.dataanalysis.ecoengine.datatypes

InputTable(List<TableTemplates>, String, String, String, boolean) - Constructor for class org.gcube.dataanalysis.ecoengine.datatypes.InputTable

InputTable(List<TableTemplates>, String, String, String) - Constructor for class org.gcube.dataanalysis.ecoengine.datatypes.InputTable

InputTable(List<TableTemplates>, String, String) - Constructor for class org.gcube.dataanalysis.ecoengine.datatypes.InputTable

insertFromBuffer(String, String, StringBuffer) - Static method in class org.gcube.dataanalysis.ecoengine.utils.DatabaseUtils

insertIntoColumn(String, String, String, List<Object>) - Static method in class org.gcube.dataanalysis.ecoengine.utils.DatabaseUtils

InsOuts(Neuron[], Neuron[], Synapse[], Synapse[]) - Method in class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.neurosolutions.Neuron

interp - Variable in class org.gcube.dataanalysis.ecoengine.transducers.InterpolationTransducer

interpolate(String, String, int, InterpolateTables.INTERPOLATIONFUNCTIONS, int, int) - Method in class org.gcube.dataanalysis.ecoengine.evaluation.bioclimate.InterpolateTables

InterpolateTables - Class in org.gcube.dataanalysis.ecoengine.evaluation.bioclimate

checks if two tables are equal checks numbers at the second decimal position

InterpolateTables(String, String, String, String, String) - Constructor for class org.gcube.dataanalysis.ecoengine.evaluation.bioclimate.InterpolateTables

InterpolateTables.INTERPOLATIONFUNCTIONS - Enum in org.gcube.dataanalysis.ecoengine.evaluation.bioclimate

InterpolationTransducer - Class in org.gcube.dataanalysis.ecoengine.transducers

InterpolationTransducer() - Constructor for class org.gcube.dataanalysis.ecoengine.transducers.InterpolationTransducer

intervalContainsPoints(double, double, double[]) - Static method in class org.gcube.dataanalysis.ecoengine.utils.Operations

InvalidParameterException - Exception in org.gcube.portlets.user.timeseries.charts.support.exceptions

InvalidParameterException() - Constructor for exception org.gcube.portlets.user.timeseries.charts.support.exceptions.InvalidParameterException

InvalidParameterException(String) - Constructor for exception org.gcube.portlets.user.timeseries.charts.support.exceptions.InvalidParameterException

InvalidParameterException(Throwable) - Constructor for exception org.gcube.portlets.user.timeseries.charts.support.exceptions.InvalidParameterException

InvalidParameterException(String, Throwable) - Constructor for exception org.gcube.portlets.user.timeseries.charts.support.exceptions.InvalidParameterException

inverseParabol(double, double, double, double) - Static method in class org.gcube.dataanalysis.ecoengine.utils.Operations

is2050 - Variable in class org.gcube.dataanalysis.ecoengine.connectors.RemoteHspecInputObject

isBetterThan(OccurrencePointsMerger.OccurrenceRecord, OccurrencePointsMerger.OccurrenceRecord) - Method in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsDuplicatesDeleter

isIn(List<Integer>, int) - Static method in class org.gcube.contentmanagement.graphtools.utils.MathFunctions

isLandDistanceYN() - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.Hspen

isNativeGeneration() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.EngineConfiguration

isNativeGeneration - Variable in class org.gcube.dataanalysis.ecoengine.connectors.RemoteHspecInputObject

isNumber(String) - Method in class org.gcube.dataanalysis.ecoengine.test.TablesComparison

isNumber(String) - Method in class org.gcube.dataanalysis.ecoengine.utils.HspecDiscrepanciesCalculator

isNumber(String) - Method in class org.gcube.dataanalysis.ecoengine.utils.TablesDiscrepanciesCalculator

isOptional() - Method in class org.gcube.dataanalysis.ecoengine.datatypes.StatisticalType

isPelagic() - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.Hspen

isRandomTake() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.LexicalEngineConfiguration

isSingleton() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.chunks.TimeSeriesChunk

isSynchronousProbabilityWrite() - Method in interface org.gcube.dataanalysis.ecoengine.interfaces.SpatialProbabilityDistributionTable

isSynchronousProbabilityWrite() - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.AquamapsNative

isSynchronousProbabilityWrite() - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.AquamapsSuitable

isType2050() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.EngineConfiguration

isUseSimpleDistance() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.LexicalEngineConfiguration

isWebFilled() - Method in class org.gcube.contentmanagement.graphtools.plotting.demo.SpiderWebPlot

Method to determine if the web chart is to be filled.

J

javaDateFormat - Static variable in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsMerger

jdbcUrl - Variable in class org.gcube.dataanalysis.ecoengine.connectors.RemoteHspecInputObject.Table

K

KDTreeTipText() - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Returns the tip text for this property.

KMeans - Class in org.gcube.dataanalysis.ecoengine.clustering

KMeans() - Constructor for class org.gcube.dataanalysis.ecoengine.clustering.KMeans

L

lastModificationColumn - Static variable in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsMerger

lastProcessedRecordsNumber - Variable in class org.gcube.dataanalysis.ecoengine.processing.LocalSimpleSplitGenerator

lastTime - Variable in class org.gcube.dataanalysis.ecoengine.processing.LocalSimpleSplitGenerator

latFld - Variable in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsMerger

latitudeColumn - Static variable in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsMerger

latitudeExtent() - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.Hspen

layer - Variable in class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.neurosolutions.Neuron

LayersNeurons - Static variable in class org.gcube.dataanalysis.ecoengine.models.FeedForwardNN

layersNeurons - Variable in class org.gcube.dataanalysis.ecoengine.models.ModelAquamapsNN

LayersNeurons - Static variable in class org.gcube.dataanalysis.ecoengine.models.testing.FeedForwardNNFile

LD(String, String) - Method in class org.gcube.contentmanagement.lexicalmatcher.utils.DistanceCalculator

learningratecoefficient - Variable in class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.neurosolutions.Neuron

learningThr - Variable in class org.gcube.dataanalysis.ecoengine.models.FeedForwardNN

learningThr - Variable in class org.gcube.dataanalysis.ecoengine.models.testing.FeedForwardNNFile

LearningThreshold - Static variable in class org.gcube.dataanalysis.ecoengine.models.FeedForwardNN

LearningThreshold - Static variable in class org.gcube.dataanalysis.ecoengine.models.testing.FeedForwardNNFile

leftRows - Variable in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsMerger

leftTableName - Variable in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsMerger

leftTableNameF - Static variable in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsMerger

LexicalEngineConfiguration - Class in org.gcube.contentmanagement.lexicalmatcher.analysis.core

LexicalEngineConfiguration() - Constructor for class org.gcube.contentmanagement.lexicalmatcher.analysis.core.LexicalEngineConfiguration

linearInterpolation(double, double, int) - Static method in class org.gcube.dataanalysis.ecoengine.utils.Operations

LineGraph - Class in org.gcube.contentmanagement.graphtools.plotting.graphs

LineGraph(String) - Constructor for class org.gcube.contentmanagement.graphtools.plotting.graphs.LineGraph

LineReader - Class in org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.neurosolutions

LineReader(String) - Constructor for class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.neurosolutions.LineReader

list - Variable in class org.gcube.dataanalysis.ecoengine.connectors.livemonitor.Resources

list - Variable in class org.gcube.dataanalysis.ecoengine.datatypes.ColumnTypesList

list - Variable in class org.gcube.dataanalysis.ecoengine.datatypes.PrimitiveTypesList

list - Variable in class org.gcube.dataanalysis.ecoengine.datatypes.TablesList

listOptions() - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Returns an enumeration describing the available options.

listSeparator - Static variable in class org.gcube.dataanalysis.ecoengine.configuration.AlgorithmConfiguration

load - Variable in class org.gcube.dataanalysis.ecoengine.connectors.RemoteHspecOutputObject.Metric

loadNN(String) - Static method in class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.Neural_Network

loadNN(String) - Static method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.AquamapsNN

loadNN(String) - Static method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.AquamapsNNNS

loadNN(String) - Static method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.AquamapsNNSuitable

loadString(String, String) - Static method in class org.gcube.contentmanagement.lexicalmatcher.utils.FileTools

LoadWeights(String) - Method in class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.neurosolutions.NeuralNet

LocalSimpleSplitGenerator - Class in org.gcube.dataanalysis.ecoengine.processing

LocalSimpleSplitGenerator() - Constructor for class org.gcube.dataanalysis.ecoengine.processing.LocalSimpleSplitGenerator

LocalSplitGenerator - Class in org.gcube.dataanalysis.ecoengine.processing

LocalSplitGenerator(AlgorithmConfiguration) - Constructor for class org.gcube.dataanalysis.ecoengine.processing.LocalSplitGenerator

LocalSplitGenerator() - Constructor for class org.gcube.dataanalysis.ecoengine.processing.LocalSplitGenerator

logaritmicTransformation(double) - Static method in class org.gcube.dataanalysis.ecoengine.utils.Operations

LogFile - Variable in class org.gcube.dataanalysis.ecoengine.test.TablesComparison

LogFile - Variable in class org.gcube.dataanalysis.ecoengine.utils.HspecDiscrepanciesCalculator

LogFile - Variable in class org.gcube.dataanalysis.ecoengine.utils.TablesDiscrepanciesCalculator

logLikelihoodEstimate(int, Instance, double, int) - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Calculates the log-likelihood of the data for the given model, taken at the maximum likelihood point.

logSubdivision(double, double, int) - Static method in class org.gcube.contentmanagement.graphtools.utils.MathFunctions

lonFld - Variable in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsMerger

longitudeColumn - Static variable in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsMerger

M

m_Bic - Variable in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

BIC-Score of the current model.

m_BinValue - Variable in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Distance value between true and false of binary attributes and "same" and "different" of nominal attributes (default = 1.0).

m_CenterInput - Variable in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

input file for the cluster centers.

m_CenterOutput - Variable in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

output file for the cluster centers.

m_ClusterAssignments - Variable in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

temporary variable holding cluster assignments while iterating.

m_ClusterCenters - Variable in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

cluster centers.

m_CurrDebugFlag - Variable in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Flag: I'm debugging.

m_CutOffFactor - Variable in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

cutoff factor - percentage of splits done in Improve-Structure part only relevant, if all children lost.

m_DebugLevel - Variable in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

level of debug output, 0 is no output.

m_DebugVectors - Variable in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

all the debug vectors.

m_DebugVectorsFile - Variable in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

file name of the input file for the random vectors.

m_DebugVectorsIndex - Variable in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

the index for the current debug vector.

m_DebugVectorsInput - Variable in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

input file for the random vectors --> USED FOR DEBUGGING.

m_DistanceF - Variable in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

the distance function used.

m_InputCenterFile - Variable in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

file name of the output file for the cluster centers.

m_Instances - Variable in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

training instances.

m_IterationCount - Variable in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

counts iterations done in main loop.

m_KDTree - Variable in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

KDTrees class if KDTrees are used.

m_KMeansStopped - Variable in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

counter to say how often kMeans was stopped by loop counter.

m_MaxIterations - Variable in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

maximum overall iterations.

m_MaxKMeans - Variable in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

maximum iterations to perform Kmeans part if negative, iterations are not checked.

m_MaxKMeansForChildren - Variable in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

see above, but for kMeans of splitted clusters.

m_MaxNumClusters - Variable in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

max number of clusters to generate.

m_MinNumClusters - Variable in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

min number of clusters to generate.

m_Mle - Variable in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Distortion.

m_Model - Variable in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

model information, should increase readability.

m_NumClusters - Variable in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

The actual number of clusters.

m_NumSplits - Variable in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Number of splits prepared.

m_NumSplitsDone - Variable in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Number of splits accepted (including cutoff factor decisions).

m_NumSplitsStillDone - Variable in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Number of splits accepted just because of cutoff factor.

m_OutputCenterFile - Variable in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

file name of the output file for the cluster centers.

m_ReplaceMissingFilter - Variable in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

replace missing values in training instances.

m_UseKDTree - Variable in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

whether to use the KDTree (the KDTree is only initialized to be configurable from the GUI).

main(String[]) - Static method in class org.gcube.contentmanagement.graphtools.core.StatisticsGenerator

main(String[]) - Static method in class org.gcube.contentmanagement.graphtools.data.BigSamplesTable

main(String[]) - Static method in class org.gcube.contentmanagement.graphtools.examples.ExampleExternalConfig

main(String[]) - Static method in class org.gcube.contentmanagement.graphtools.examples.ExampleExternalConfigPostGress

main(String[]) - Static method in class org.gcube.contentmanagement.graphtools.examples.ExampleExternalConfigPostGressProd

main(String[]) - Static method in class org.gcube.contentmanagement.graphtools.examples.ExampleFilters

main(String[]) - Static method in class org.gcube.contentmanagement.graphtools.examples.ExampleFilters2

main(String[]) - Static method in class org.gcube.contentmanagement.graphtools.examples.ExampleMeanVariance

main(String[]) - Static method in class org.gcube.contentmanagement.graphtools.examples.ExamplePostGressLocalRadar

main(String[]) - Static method in class org.gcube.contentmanagement.graphtools.examples.ExampleStaticConfig

main(String[]) - Static method in class org.gcube.contentmanagement.graphtools.examples.ExampleStringGraphData

main(String[]) - Static method in class org.gcube.contentmanagement.graphtools.examples.graphsTypes.ExampleDataBuiltGraph

main(String[]) - Static method in class org.gcube.contentmanagement.graphtools.examples.graphsTypes.ExampleDerivative

main(String[]) - Static method in class org.gcube.contentmanagement.graphtools.examples.graphsTypes.ExampleHistogram

main(String[]) - Static method in class org.gcube.contentmanagement.graphtools.examples.graphsTypes.ExampleImage

main(String[]) - Static method in class org.gcube.contentmanagement.graphtools.examples.graphsTypes.ExampleLines

main(String[]) - Static method in class org.gcube.contentmanagement.graphtools.examples.graphsTypes.ExampleNormalDistribution

main(String[]) - Static method in class org.gcube.contentmanagement.graphtools.examples.graphsTypes.ExampleNumericSeries

main(String[]) - Static method in class org.gcube.contentmanagement.graphtools.examples.graphsTypes.ExamplePie

main(String[]) - Static method in class org.gcube.contentmanagement.graphtools.examples.graphsTypes.ExampleRadar

main(String[]) - Static method in class org.gcube.contentmanagement.graphtools.examples.graphsTypes.ExampleScatter

main(String[]) - Static method in class org.gcube.contentmanagement.graphtools.examples.graphsTypes.ExampleTimeSeries

main(String[]) - Static method in class org.gcube.contentmanagement.graphtools.examples.graphsTypes.ExampleTimeSeries2

main(String[]) - Static method in class org.gcube.contentmanagement.graphtools.plotting.demo.PieChartDemo1

Starting point for the demonstration application.

main(String[]) - Static method in class org.gcube.contentmanagement.graphtools.plotting.demo.SpiderWebDemo1

Starting point for the demonstration application.

main(String[]) - Static method in class org.gcube.contentmanagement.graphtools.plotting.demo.TestWeb

main(String[]) - Static method in class org.gcube.contentmanagement.graphtools.plotting.demo.TimeSeriesChartDemo1

Starting point for the demonstration application.

main(String[]) - Static method in class org.gcube.contentmanagement.graphtools.plotting.graphs.PieGraph

main(String[]) - Static method in class org.gcube.contentmanagement.graphtools.plotting.graphs.RadarGraph

main(String[]) - Static method in class org.gcube.contentmanagement.graphtools.tests.old.ExampleDerivative

main(String[]) - Static method in class org.gcube.contentmanagement.graphtools.tests.old.ExampleMathFunctions

main(String[]) - Static method in class org.gcube.contentmanagement.graphtools.tests.old.ExampleOperatorsInvoking

main(String[]) - Static method in class org.gcube.contentmanagement.graphtools.tests.old.ExampleRMUsage

main(String[]) - Static method in class org.gcube.contentmanagement.graphtools.tests.old.ExampleUserSampleSet

main(String[]) - Static method in class org.gcube.contentmanagement.graphtools.tests.old.TestConverters

main(String[]) - Static method in class org.gcube.contentmanagement.graphtools.tests.old.TestDBExtractor

main(String[]) - Static method in class org.gcube.contentmanagement.graphtools.tests.old.TextTest

main(String[]) - Static method in class org.gcube.contentmanagement.graphtools.tests.RegressionTestAllGraphs

main(String[]) - Static method in class org.gcube.contentmanagement.graphtools.tests.show.ExampleStringGraphData

main(String[]) - Static method in class org.gcube.contentmanagement.graphtools.tests.testConnections

main(String[]) - Static method in class org.gcube.contentmanagement.graphtools.utils.DateGuesser

main(String[]) - Static method in class org.gcube.contentmanagement.graphtools.utils.HttpRequest

main(String[]) - Static method in class org.gcube.contentmanagement.graphtools.utils.MathFunctions

main(String[]) - Static method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.DataTypeRecognizer

main(String[]) - Static method in class org.gcube.contentmanagement.lexicalmatcher.analysis.examples.Example1_Species

main(String[]) - Static method in class org.gcube.contentmanagement.lexicalmatcher.analysis.examples.Example2_Area

main(String[]) - Static method in class org.gcube.contentmanagement.lexicalmatcher.analysis.examples.Example3_SingleMatchShark

main(String[]) - Static method in class org.gcube.contentmanagement.lexicalmatcher.analysis.examples.Example4_SingleMatchMitella

main(String[]) - Static method in class org.gcube.contentmanagement.lexicalmatcher.analysis.examples.Example5_SingleMatchMitella

main(String[]) - Static method in class org.gcube.contentmanagement.lexicalmatcher.analysis.examples.ExampleGuessingExternalCfg

main(String[]) - Static method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.Category

main(String[]) - Static method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.DBObjectTranslator

main(String[]) - Static method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.RelationEdge

main(String[]) - Static method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.TSObjectTransformer

main(String[]) - Static method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.graph.GraphDisplayer

main(String[]) - Static method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.graph.RelationEdge

main(String[]) - Static method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.graph.TreeExtractor

main(String[]) - Static method in class org.gcube.contentmanagement.lexicalmatcher.analysis.run.StarGraphExtraction

main(String[]) - Static method in class org.gcube.contentmanagement.lexicalmatcher.analysis.test.old.BenchMarkTest1

main(String[]) - Static method in class org.gcube.contentmanagement.lexicalmatcher.analysis.test.old.BenchMarkTest2

main(String[]) - Static method in class org.gcube.contentmanagement.lexicalmatcher.analysis.test.old.BenchMarkTest3

main(String[]) - Static method in class org.gcube.contentmanagement.lexicalmatcher.analysis.test.old.BenchMarkTest4

main(String[]) - Static method in class org.gcube.contentmanagement.lexicalmatcher.analysis.test.old.BenchMarkTest5

main(String[]) - Static method in class org.gcube.contentmanagement.lexicalmatcher.analysis.test.old.BenchMarkTestExternalCfg

main(String[]) - Static method in class org.gcube.contentmanagement.lexicalmatcher.analysis.test.old.BenchMarkTestFilterCategory

main(String[]) - Static method in class org.gcube.contentmanagement.lexicalmatcher.analysis.test.old.BenchMarkTestSingleton

main(String[]) - Static method in class org.gcube.contentmanagement.lexicalmatcher.analysis.test.old.BenchMarkTestTSCountry

main(String[]) - Static method in class org.gcube.contentmanagement.lexicalmatcher.analysis.test.old.BenchMarkTrainingSet

main(String[]) - Static method in class org.gcube.contentmanagement.lexicalmatcher.analysis.test.old.BenchMarkTrainingSetScientificName

main(String[]) - Static method in class org.gcube.contentmanagement.lexicalmatcher.analysis.test.old.TestExternalCfgProduction

main(String[]) - Static method in class org.gcube.contentmanagement.lexicalmatcher.analysis.test.old.TestSingleExternalCfgProduction

main(String[]) - Static method in class org.gcube.contentmanagement.lexicalmatcher.analysis.test.TestExternalCfgProduction

main(String[]) - Static method in class org.gcube.contentmanagement.lexicalmatcher.analysis.test.TestSingleExternalCfgProduction

main(String[]) - Static method in class org.gcube.contentmanagement.lexicalmatcher.utils.DistanceCalculator

main(String[]) - Static method in class org.gcube.contentmanagement.lexicalmatcher.utils.MathFunctions

main(String[]) - Static method in class org.gcube.dataanalysis.ecoengine.clustering.DBScan

main(String[]) - Static method in class org.gcube.dataanalysis.ecoengine.clustering.KMeans

main(String[]) - Static method in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Main method for testing this class.

main(String[]) - Static method in class org.gcube.dataanalysis.ecoengine.clustering.XMeansWrapper

main(String[]) - Static method in class org.gcube.dataanalysis.ecoengine.evaluation.bioclimate.BioClimateAnalysis

main(String[]) - Static method in class org.gcube.dataanalysis.ecoengine.evaluation.bioclimate.ExperimentForArticle

main(String[]) - Static method in class org.gcube.dataanalysis.ecoengine.evaluation.bioclimate.ExperimentHSPECForArticle

main(String[]) - Static method in class org.gcube.dataanalysis.ecoengine.evaluation.bioclimate.InterpolateTables

main(String[]) - Static method in class org.gcube.dataanalysis.ecoengine.evaluation.bioclimate.ProduceTestMap

main(String[]) - Static method in class org.gcube.dataanalysis.ecoengine.evaluation.DistributionQualityAnalysis

main(String[]) - Static method in class org.gcube.dataanalysis.ecoengine.evaluation.HabitatRepresentativeness

main(String[]) - Static method in class org.gcube.dataanalysis.ecoengine.interfaces.ActorNode

main(String[]) - Static method in class org.gcube.dataanalysis.ecoengine.interfaces.SpatialProbabilityDistributionNode

main(String[]) - Static method in class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.Neural_Network

main(String[]) - Static method in class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.Neuron

main(String[]) - Static method in class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.neurosolutions.example3

main(String[]) - Static method in class org.gcube.dataanalysis.ecoengine.models.cores.pca.PrincipalComponentAnalysis

main(String[]) - Static method in class org.gcube.dataanalysis.ecoengine.processing.factories.GeneratorsFactory

main(String[]) - Static method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.DummyAlgorithm

main(String[]) - Static method in class org.gcube.dataanalysis.ecoengine.test.checks.RegressionComplexGeneration

example of parallel processing on a single machine the procedure will generate a new table for a distribution on suitable species

main(String[]) - Static method in class org.gcube.dataanalysis.ecoengine.test.checks.RegressionSimpleGeneration

example of parallel processing on a single machine the procedure will generate a new table for a distribution on suitable species

main(String[]) - Static method in class org.gcube.dataanalysis.ecoengine.test.checks.TestBayesianModels

example of parallel processing on a single machine the procedure will generate a new table for a distribution on suitable species

main(String[]) - Static method in class org.gcube.dataanalysis.ecoengine.test.checks.TestBayesianModelsDBTest

example of parallel processing on a single machine the procedure will generate a new table for a distribution on suitable species

main(String[]) - Static method in class org.gcube.dataanalysis.ecoengine.test.checks.TestBioClimateAnalysis

main(String[]) - Static method in class org.gcube.dataanalysis.ecoengine.test.checks.TestClusterer

example of parallel processing on a single machine the procedure will generate a new table for a distribution on suitable species

main(String[]) - Static method in class org.gcube.dataanalysis.ecoengine.test.checks.TestDBNEXTEvaluators

main(String[]) - Static method in class org.gcube.dataanalysis.ecoengine.test.checks.TestEvaluation

example of parallel processing on a single machine the procedure will generate a new table for a distribution on suitable species

main(String[]) - Static method in class org.gcube.dataanalysis.ecoengine.test.checks.TestHSPECBioClimateAnalysisDev

main(String[]) - Static method in class org.gcube.dataanalysis.ecoengine.test.checks.TestHSPECBioClimateAnalysisProd

main(String[]) - Static method in class org.gcube.dataanalysis.ecoengine.test.checks.TestMahoutComparison

main(String[]) - Static method in class org.gcube.dataanalysis.ecoengine.test.checks.TestsHSPENTraining

example of parallel processing on a single machine the procedure will generate a new table for a distribution on suitable species

main(String[]) - Static method in class org.gcube.dataanalysis.ecoengine.test.experiments.latimeria.ExperimentsForLatimeria

main(String[]) - Static method in class org.gcube.dataanalysis.ecoengine.test.neuralnetwork.TestNN

main(String[]) - Static method in class org.gcube.dataanalysis.ecoengine.test.PerformanceTests

main(String[]) - Static method in class org.gcube.dataanalysis.ecoengine.test.ProduceTestMap

main(String[]) - Static method in class org.gcube.dataanalysis.ecoengine.test.regression.RegressionTestClusterers

example of parallel processing on a single machine the procedure will generate a new table for a distribution on suitable species

main(String[]) - Static method in class org.gcube.dataanalysis.ecoengine.test.regression.RegressionTestEvaluators

example of parallel processing on a single machine the procedure will generate a new table for a distribution on suitable species

main(String[]) - Static method in class org.gcube.dataanalysis.ecoengine.test.regression.RegressionTestGenerators

example of parallel processing on a single machine the procedure will generate a new table for a distribution on suitable species

main(String[]) - Static method in class org.gcube.dataanalysis.ecoengine.test.regression.RegressionTestModelers

example of parallel processing on a single machine the procedure will generate a new table for a distribution on suitable species

main(String[]) - Static method in class org.gcube.dataanalysis.ecoengine.test.regression.RegressionTestTransducers

main(String[]) - Static method in class org.gcube.dataanalysis.ecoengine.test.TablesComparison

main(String[]) - Static method in class org.gcube.dataanalysis.ecoengine.test.TestsMetaInfo

example of parallel processing on a single machine the procedure will generate a new table for a distribution on suitable species

main(String[]) - Static method in class org.gcube.dataanalysis.ecoengine.test.trainers.TrainProduceTestMap

main(String[]) - Static method in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsIntersector

main(String[]) - Static method in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsMerger

main(String[]) - Static method in class org.gcube.dataanalysis.ecoengine.utils.HspecDiscrepanciesCalculator

main(String[]) - Static method in class org.gcube.dataanalysis.ecoengine.utils.Operations

main(String[]) - Static method in class org.gcube.dataanalysis.ecoengine.utils.ResourceFactory

main(String[]) - Static method in class org.gcube.dataanalysis.ecoengine.utils.TablesDiscrepanciesCalculator

main(String[]) - Static method in class org.gcube.dataanalysis.ecoengine.utils.Transformations

main(String[]) - Static method in class org.gcube.portlets.user.timeseries.charts.support.tests.GenerateDataTest

main1(String[]) - Static method in class org.gcube.contentmanagement.graphtools.tests.old.TestConverters

main1(String[]) - Static method in class org.gcube.dataanalysis.ecoengine.clustering.XMeansWrapper

main1(String[]) - Static method in class org.gcube.dataanalysis.ecoengine.test.checks.TestBayesianModels

main1(String[]) - Static method in class org.gcube.dataanalysis.ecoengine.test.checks.TestBayesianModelsDBTest

main1(String[]) - Static method in class org.gcube.dataanalysis.ecoengine.test.checks.TestBioClimateAnalysis

main1(String[]) - Static method in class org.gcube.dataanalysis.ecoengine.test.experiments.latimeria.ExperimentsForLatimeria

main1(String[]) - Static method in class org.gcube.dataanalysis.ecoengine.test.neuralnetwork.TestNN

main1(String[]) - Static method in class org.gcube.dataanalysis.ecoengine.test.ProduceTestMap

main1(String[]) - Static method in class org.gcube.dataanalysis.ecoengine.utils.Operations

main2(String[]) - Static method in class org.gcube.dataanalysis.ecoengine.test.ProduceTestMap

mainCluster(String[]) - Static method in class org.gcube.dataanalysis.ecoengine.clustering.DBScan

mainRandom(String[]) - Static method in class org.gcube.dataanalysis.ecoengine.clustering.DBScan

makeCentersRandomly(Random, Instances, int) - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Generates new centers randomly.

ManageCDATA(String) - Static method in class org.gcube.contentmanagement.graphtools.utils.HttpRequest

manageHighProbability(float, OccurrencePointsMerger.OccurrenceRecord, OccurrencePointsMerger.OccurrenceRecord) - Method in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsIntersector

manageHighProbability(float, OccurrencePointsMerger.OccurrenceRecord, OccurrencePointsMerger.OccurrenceRecord) - Method in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsMerger

manageHighProbability(float, OccurrencePointsMerger.OccurrenceRecord, OccurrencePointsMerger.OccurrenceRecord) - Method in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsSubtraction

manageLowProbability(float, OccurrencePointsMerger.OccurrenceRecord, OccurrencePointsMerger.OccurrenceRecord) - Method in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsIntersector

manageLowProbability(float, OccurrencePointsMerger.OccurrenceRecord, OccurrencePointsMerger.OccurrenceRecord) - Method in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsMerger

manageLowProbability(float, OccurrencePointsMerger.OccurrenceRecord, OccurrencePointsMerger.OccurrenceRecord) - Method in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsSubtraction

MarineAbsencePointsFromAquamapsDistribution - Class in org.gcube.dataanalysis.ecoengine.transducers.simplequeryexecutors

MarineAbsencePointsFromAquamapsDistribution() - Constructor for class org.gcube.dataanalysis.ecoengine.transducers.simplequeryexecutors.MarineAbsencePointsFromAquamapsDistribution

MarinePresencePoints - Class in org.gcube.dataanalysis.ecoengine.transducers.simplequeryexecutors

MarinePresencePoints() - Constructor for class org.gcube.dataanalysis.ecoengine.transducers.simplequeryexecutors.MarinePresencePoints

MathFunctions - Class in org.gcube.contentmanagement.graphtools.utils

MathFunctions() - Constructor for class org.gcube.contentmanagement.graphtools.utils.MathFunctions

MathFunctions - Class in org.gcube.contentmanagement.lexicalmatcher.utils

MathFunctions() - Constructor for class org.gcube.contentmanagement.lexicalmatcher.utils.MathFunctions

matrix2ExampleSet(double[][]) - Static method in class org.gcube.dataanalysis.ecoengine.utils.Transformations

Max - Variable in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.AquamapsEnvelope

MAX_INTERIOR_GAP - Static variable in class org.gcube.contentmanagement.graphtools.plotting.demo.SpiderWebPlot

The maximum interior gap (currently 40%).

maxfactor - Variable in class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.Neural_Network

maxfactor - Variable in class org.gcube.dataanalysis.ecoengine.models.FeedForwardNN

maxfactor - Variable in class org.gcube.dataanalysis.ecoengine.models.testing.FeedForwardNNFile

maxiter - Variable in class org.gcube.dataanalysis.ecoengine.models.FeedForwardNN

maxiter - Variable in class org.gcube.dataanalysis.ecoengine.models.testing.FeedForwardNNFile

MaxIterations - Static variable in class org.gcube.dataanalysis.ecoengine.models.FeedForwardNN

MaxIterations - Static variable in class org.gcube.dataanalysis.ecoengine.models.testing.FeedForwardNNFile

maxIterationsTipText() - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Returns the tip text for this property.

maxKMeansForChildrenTipText() - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Returns the tip text for this property.

maxKMeansTipText() - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Returns the tip text for this property.

MaxMinGenerator - Class in org.gcube.dataanalysis.ecoengine.models.cores.aquamaps

MaxMinGenerator(SessionFactory) - Constructor for class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.MaxMinGenerator

maxNumClustersTipText() - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Returns the tip text for this property.

maxX - Variable in class org.gcube.contentmanagement.graphtools.abstracts.SamplesTable

maxY - Variable in class org.gcube.contentmanagement.graphtools.abstracts.SamplesTable

mean(double[]) - Static method in class org.gcube.contentmanagement.graphtools.tests.old.ExampleMathFunctions

mean(double[]) - Static method in class org.gcube.contentmanagement.graphtools.utils.MathFunctions

mean(double[]) - Static method in class org.gcube.contentmanagement.lexicalmatcher.utils.MathFunctions

meanOrMode(Instances, int[], int) - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Computes Mean Or Mode of one attribute on a subset of m_Instances.

means - Variable in class org.gcube.dataanalysis.ecoengine.utils.Operations

mergeConfig(LexicalEngineConfiguration) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.LexicalEngineConfiguration

mergeMatrixes(double[][], double[][]) - Static method in class org.gcube.dataanalysis.ecoengine.utils.Transformations

metrics - Variable in class org.gcube.dataanalysis.ecoengine.connectors.RemoteHspecOutputObject

Min - Variable in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.AquamapsEnvelope

minfactor - Variable in class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.Neural_Network

minfactor - Variable in class org.gcube.dataanalysis.ecoengine.models.FeedForwardNN

minfactor - Variable in class org.gcube.dataanalysis.ecoengine.models.testing.FeedForwardNNFile

MinibatchTrainPatterns(Pattern[], double, int) - Method in class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.neurosolutions.NeuralNet

minNumClustersTipText() - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Returns the tip text for this property.

minPoints - Variable in class org.gcube.dataanalysis.ecoengine.clustering.DBScan

minX - Variable in class org.gcube.contentmanagement.graphtools.abstracts.SamplesTable

minY - Variable in class org.gcube.contentmanagement.graphtools.abstracts.SamplesTable

Model - Interface in org.gcube.dataanalysis.ecoengine.interfaces

model(Model) - Method in interface org.gcube.dataanalysis.ecoengine.interfaces.Modeler

model(Model) - Method in class org.gcube.dataanalysis.ecoengine.modeling.SimpleModeler

ModelAquamapsNN - Class in org.gcube.dataanalysis.ecoengine.models

ModelAquamapsNN() - Constructor for class org.gcube.dataanalysis.ecoengine.models.ModelAquamapsNN

ModelAquamapsNNNS - Class in org.gcube.dataanalysis.ecoengine.models

ModelAquamapsNNNS() - Constructor for class org.gcube.dataanalysis.ecoengine.models.ModelAquamapsNNNS

Modeler - Interface in org.gcube.dataanalysis.ecoengine.interfaces

ModelersFactory - Class in org.gcube.dataanalysis.ecoengine.processing.factories

ModelersFactory() - Constructor for class org.gcube.dataanalysis.ecoengine.processing.factories.ModelersFactory

modelersFile - Static variable in class org.gcube.dataanalysis.ecoengine.configuration.AlgorithmConfiguration

ModelerT - Class in org.gcube.dataanalysis.ecoengine.user

ModelerT(ComputationalAgent, AlgorithmConfiguration) - Constructor for class org.gcube.dataanalysis.ecoengine.user.ModelerT

ModelHSPEN - Class in org.gcube.dataanalysis.ecoengine.models

ModelHSPEN() - Constructor for class org.gcube.dataanalysis.ecoengine.models.ModelHSPEN

ModelName - Static variable in class org.gcube.dataanalysis.ecoengine.models.FeedForwardNN

ModelName - Static variable in class org.gcube.dataanalysis.ecoengine.models.testing.FeedForwardNNFile

ModelName - Static variable in class org.gcube.dataanalysis.ecoengine.spatialdistributions.BayesianDistribution

modelName - Variable in class org.gcube.dataanalysis.ecoengine.spatialdistributions.BayesianDistribution

modelsFile - Static variable in class org.gcube.dataanalysis.ecoengine.configuration.AlgorithmConfiguration

modifdate - Variable in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsMerger.OccurrenceRecord

modifDatFld - Variable in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsMerger

momentumrate - Variable in class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.neurosolutions.Neuron

MONTH - Static variable in class org.gcube.contentmanagement.graphtools.utils.DateGuesser

mustInterruptProcess() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.chunks.TimeSeriesChunk

N

name - Variable in class org.gcube.dataanalysis.ecoengine.datatypes.StatisticalType

nameHuman - Variable in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.LexicalEngineConfiguration

Neural_Network - Class in org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks

Neural_Network(int, int, Neural_Network.ACTIVATIONFUNCTION) - Constructor for class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.Neural_Network

Neural_Network(int, int, Neural_Network.ACTIVATIONFUNCTION, float[]) - Constructor for class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.Neural_Network

Neural_Network(int, int, int[], Neural_Network.ACTIVATIONFUNCTION) - Constructor for class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.Neural_Network

Neural_Network(int, int, int) - Constructor for class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.Neural_Network

Neural_Network(int, int, int, float[]) - Constructor for class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.Neural_Network

Neural_Network(int, int, int[], int) - Constructor for class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.Neural_Network

Neural_Network.ACTIVATIONFUNCTION - Enum in org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks

NeuralNet - Class in org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.neurosolutions

NeuralNet(String, Randomizer) - Constructor for class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.neurosolutions.NeuralNet

NeuralNet(int, int, int[]) - Constructor for class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.neurosolutions.NeuralNet

NeuralNet(int[], double[], char[], double[], double[], Randomizer) - Constructor for class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.neurosolutions.NeuralNet

Neuron - Class in org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks

Neuron(int, int) - Constructor for class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.Neuron

Neuron(int, int, float[]) - Constructor for class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.Neuron

Neuron - Class in org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.neurosolutions

Neuron(int) - Constructor for class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.neurosolutions.Neuron

Neuron(int, int, double, char, double, double, Randomizer) - Constructor for class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.neurosolutions.Neuron

neuronsin - Variable in class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.neurosolutions.Neuron

neuronsout - Variable in class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.neurosolutions.Neuron

newCentersAfterSplit(double[], double[], double, Instances) - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Returns new center list.

newCentersAfterSplit(boolean[], Instances) - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Returns new centers.

nextAssignedOne(int, int, int[]) - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Searches along the assignment array for the next entry of the center in question.

nextChunk() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.chunks.ChunkSet

nextChunk() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.chunks.ReferenceChunkSet

nextChunk() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.chunks.SingletonChunkSet

nextChunk() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.chunks.TimeSeriesChunkSet

NextLine() - Method in class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.neurosolutions.LineReader

NextLineSplitted() - Method in class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.neurosolutions.LineReader

nn - Variable in class org.gcube.dataanalysis.ecoengine.models.FeedForwardNN

nn - Variable in class org.gcube.dataanalysis.ecoengine.models.testing.FeedForwardNNFile

nodeAlgorithmsFile - Static variable in class org.gcube.dataanalysis.ecoengine.configuration.AlgorithmConfiguration

normalizeFrequencies(double[], int) - Static method in class org.gcube.dataanalysis.ecoengine.utils.Operations

numberOfClusters() - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Returns the number of clusters.

numberOfEntries - Variable in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.chunks.ChunkSet

numberOfThreadsToUse - Variable in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.LexicalEngineConfiguration

numberOfThreadsToUse - Variable in class org.gcube.dataanalysis.ecoengine.processing.LocalSimpleSplitGenerator

NumericSeriesGraph - Class in org.gcube.contentmanagement.graphtools.plotting.graphs

NumericSeriesGraph(String) - Constructor for class org.gcube.contentmanagement.graphtools.plotting.graphs.NumericSeriesGraph

nWorkers - Variable in class org.gcube.dataanalysis.ecoengine.connectors.RemoteHspecInputObject

O

objectstodelete - Variable in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsMerger

objectstoinsert - Variable in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsMerger

occurrenceCellsTable - Variable in class org.gcube.dataanalysis.ecoengine.connectors.RemoteHspecInputObject

OccurrencePoint - Class in org.gcube.dataanalysis.ecoengine.models.cores.aquamaps

OccurrencePoint(String, String, Double) - Constructor for class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.OccurrencePoint

OccurrencePoint(String, Double) - Constructor for class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.OccurrencePoint

OccurrencePoint(Double) - Constructor for class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.OccurrencePoint

OccurrencePointsClusterLabel - Variable in class org.gcube.dataanalysis.ecoengine.clustering.DBScan

OccurrencePointsClusterTable - Variable in class org.gcube.dataanalysis.ecoengine.clustering.DBScan

OccurrencePointsDuplicatesDeleter - Class in org.gcube.dataanalysis.ecoengine.transducers

OccurrencePointsDuplicatesDeleter() - Constructor for class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsDuplicatesDeleter

OccurrencePointSets - Class in org.gcube.dataanalysis.ecoengine.models.cores.aquamaps

OccurrencePointSets() - Constructor for class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.OccurrencePointSets

OccurrencePointsInSeaOnEarth - Class in org.gcube.dataanalysis.ecoengine.transducers

OccurrencePointsInSeaOnEarth() - Constructor for class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsInSeaOnEarth

OccurrencePointsInSeaOnEarth.inseasonearth - Enum in org.gcube.dataanalysis.ecoengine.transducers

OccurrencePointsIntersector - Class in org.gcube.dataanalysis.ecoengine.transducers

OccurrencePointsIntersector() - Constructor for class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsIntersector

OccurrencePointsMerger - Class in org.gcube.dataanalysis.ecoengine.transducers

OccurrencePointsMerger() - Constructor for class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsMerger

OccurrencePointsMerger.OccurrenceRecord - Class in org.gcube.dataanalysis.ecoengine.transducers

OccurrencePointsMerger.OccurrenceRecord() - Constructor for class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsMerger.OccurrenceRecord

OccurrencePointsSubtraction - Class in org.gcube.dataanalysis.ecoengine.transducers

OccurrencePointsSubtraction() - Constructor for class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsSubtraction

OccurrencePointsTable - Variable in class org.gcube.dataanalysis.ecoengine.clustering.DBScan

occurrenceRecord2String(OccurrencePointsMerger.OccurrenceRecord) - Method in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsMerger

Operations - Class in org.gcube.dataanalysis.ecoengine.utils

Operations() - Constructor for class org.gcube.dataanalysis.ecoengine.utils.Operations

optional - Variable in class org.gcube.dataanalysis.ecoengine.datatypes.StatisticalType

org.gcube.contentmanagement.graphtools.abstracts - package org.gcube.contentmanagement.graphtools.abstracts

org.gcube.contentmanagement.graphtools.core - package org.gcube.contentmanagement.graphtools.core

org.gcube.contentmanagement.graphtools.core.filters - package org.gcube.contentmanagement.graphtools.core.filters

org.gcube.contentmanagement.graphtools.data - package org.gcube.contentmanagement.graphtools.data

org.gcube.contentmanagement.graphtools.data.conversions - package org.gcube.contentmanagement.graphtools.data.conversions

org.gcube.contentmanagement.graphtools.data.databases - package org.gcube.contentmanagement.graphtools.data.databases

org.gcube.contentmanagement.graphtools.examples - package org.gcube.contentmanagement.graphtools.examples

org.gcube.contentmanagement.graphtools.examples.graphsTypes - package org.gcube.contentmanagement.graphtools.examples.graphsTypes

org.gcube.contentmanagement.graphtools.plotting.demo - package org.gcube.contentmanagement.graphtools.plotting.demo

org.gcube.contentmanagement.graphtools.plotting.graphs - package org.gcube.contentmanagement.graphtools.plotting.graphs

org.gcube.contentmanagement.graphtools.tests - package org.gcube.contentmanagement.graphtools.tests

org.gcube.contentmanagement.graphtools.tests.old - package org.gcube.contentmanagement.graphtools.tests.old

org.gcube.contentmanagement.graphtools.tests.show - package org.gcube.contentmanagement.graphtools.tests.show

org.gcube.contentmanagement.graphtools.utils - package org.gcube.contentmanagement.graphtools.utils

org.gcube.contentmanagement.lexicalmatcher.analysis.core - package org.gcube.contentmanagement.lexicalmatcher.analysis.core

org.gcube.contentmanagement.lexicalmatcher.analysis.examples - package org.gcube.contentmanagement.lexicalmatcher.analysis.examples

org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data - package org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data

org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.interfaces - package org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.interfaces

org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.chunks - package org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.chunks

org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.graph - package org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.graph

org.gcube.contentmanagement.lexicalmatcher.analysis.run - package org.gcube.contentmanagement.lexicalmatcher.analysis.run

org.gcube.contentmanagement.lexicalmatcher.analysis.test - package org.gcube.contentmanagement.lexicalmatcher.analysis.test

org.gcube.contentmanagement.lexicalmatcher.analysis.test.old - package org.gcube.contentmanagement.lexicalmatcher.analysis.test.old

org.gcube.contentmanagement.lexicalmatcher.utils - package org.gcube.contentmanagement.lexicalmatcher.utils

org.gcube.dataanalysis.ecoengine.clustering - package org.gcube.dataanalysis.ecoengine.clustering

org.gcube.dataanalysis.ecoengine.configuration - package org.gcube.dataanalysis.ecoengine.configuration

org.gcube.dataanalysis.ecoengine.connectors - package org.gcube.dataanalysis.ecoengine.connectors

org.gcube.dataanalysis.ecoengine.connectors.livemonitor - package org.gcube.dataanalysis.ecoengine.connectors.livemonitor

org.gcube.dataanalysis.ecoengine.datatypes - package org.gcube.dataanalysis.ecoengine.datatypes

org.gcube.dataanalysis.ecoengine.datatypes.enumtypes - package org.gcube.dataanalysis.ecoengine.datatypes.enumtypes

org.gcube.dataanalysis.ecoengine.evaluation - package org.gcube.dataanalysis.ecoengine.evaluation

org.gcube.dataanalysis.ecoengine.evaluation.bioclimate - package org.gcube.dataanalysis.ecoengine.evaluation.bioclimate

org.gcube.dataanalysis.ecoengine.interfaces - package org.gcube.dataanalysis.ecoengine.interfaces

org.gcube.dataanalysis.ecoengine.modeling - package org.gcube.dataanalysis.ecoengine.modeling

org.gcube.dataanalysis.ecoengine.models - package org.gcube.dataanalysis.ecoengine.models

org.gcube.dataanalysis.ecoengine.models.cores.aquamaps - package org.gcube.dataanalysis.ecoengine.models.cores.aquamaps

org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks - package org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks

org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.neurosolutions - package org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.neurosolutions

org.gcube.dataanalysis.ecoengine.models.cores.pca - package org.gcube.dataanalysis.ecoengine.models.cores.pca

org.gcube.dataanalysis.ecoengine.models.testing - package org.gcube.dataanalysis.ecoengine.models.testing

org.gcube.dataanalysis.ecoengine.processing - package org.gcube.dataanalysis.ecoengine.processing

org.gcube.dataanalysis.ecoengine.processing.factories - package org.gcube.dataanalysis.ecoengine.processing.factories

org.gcube.dataanalysis.ecoengine.spatialdistributions - package org.gcube.dataanalysis.ecoengine.spatialdistributions

org.gcube.dataanalysis.ecoengine.test - package org.gcube.dataanalysis.ecoengine.test

org.gcube.dataanalysis.ecoengine.test.checks - package org.gcube.dataanalysis.ecoengine.test.checks

org.gcube.dataanalysis.ecoengine.test.experiments.latimeria - package org.gcube.dataanalysis.ecoengine.test.experiments.latimeria

org.gcube.dataanalysis.ecoengine.test.neuralnetwork - package org.gcube.dataanalysis.ecoengine.test.neuralnetwork

org.gcube.dataanalysis.ecoengine.test.regression - package org.gcube.dataanalysis.ecoengine.test.regression

org.gcube.dataanalysis.ecoengine.test.trainers - package org.gcube.dataanalysis.ecoengine.test.trainers

org.gcube.dataanalysis.ecoengine.transducers - package org.gcube.dataanalysis.ecoengine.transducers

org.gcube.dataanalysis.ecoengine.transducers.simplequeryexecutors - package org.gcube.dataanalysis.ecoengine.transducers.simplequeryexecutors

org.gcube.dataanalysis.ecoengine.user - package org.gcube.dataanalysis.ecoengine.user

org.gcube.dataanalysis.ecoengine.utils - package org.gcube.dataanalysis.ecoengine.utils

org.gcube.portlets.user.timeseries.charts.support.assertions - package org.gcube.portlets.user.timeseries.charts.support.assertions

org.gcube.portlets.user.timeseries.charts.support.exceptions - package org.gcube.portlets.user.timeseries.charts.support.exceptions

org.gcube.portlets.user.timeseries.charts.support.tablemodel - package org.gcube.portlets.user.timeseries.charts.support.tablemodel

org.gcube.portlets.user.timeseries.charts.support.tests - package org.gcube.portlets.user.timeseries.charts.support.tests

org.gcube.portlets.user.timeseries.charts.support.types - package org.gcube.portlets.user.timeseries.charts.support.types

otherValues - Variable in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsMerger.OccurrenceRecord

outliersColumn - Static variable in class org.gcube.dataanalysis.ecoengine.clustering.DBScan

outliersColumnType - Static variable in class org.gcube.dataanalysis.ecoengine.clustering.DBScan

Output(double[]) - Method in class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.neurosolutions.NeuralNet

output - Variable in class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.neurosolutions.Neuron

OutputBatchTrain(double, double) - Method in class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.neurosolutions.Neuron

outputCenterFileTipText() - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Returns the tip text for this property.

OutputIncrementalTrain(double, double) - Method in class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.neurosolutions.Neuron

OutputTable - Class in org.gcube.dataanalysis.ecoengine.datatypes

OutputTable(List<TableTemplates>, String, String, String, String, boolean) - Constructor for class org.gcube.dataanalysis.ecoengine.datatypes.OutputTable

OutputTable(List<TableTemplates>, String, String, String, String) - Constructor for class org.gcube.dataanalysis.ecoengine.datatypes.OutputTable

OutputTable(List<TableTemplates>, String, String, String) - Constructor for class org.gcube.dataanalysis.ecoengine.datatypes.OutputTable

P

paint1(Graphics) - Method in class org.gcube.contentmanagement.graphtools.examples.graphsTypes.ExampleImage

parabolicInterpolation(double, double, int) - Static method in class org.gcube.dataanalysis.ecoengine.utils.Operations

Pattern - Class in org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.neurosolutions

Pattern(double[], double[]) - Constructor for class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.neurosolutions.Pattern

PerformanceTests - Class in org.gcube.dataanalysis.ecoengine.test

PerformanceTests() - Constructor for class org.gcube.dataanalysis.ecoengine.test.PerformanceTests

persist() - Method in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsMerger

PFD(int, String) - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Does debug printouts.

PFD_CURR(String) - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Does debug printouts.

PieChartDemo1 - Class in org.gcube.contentmanagement.graphtools.plotting.demo

A simple demonstration application showing how to create a pie chart using data from a DefaultPieDataset.

PieChartDemo1(String) - Constructor for class org.gcube.contentmanagement.graphtools.plotting.demo.PieChartDemo1

Default constructor.

PieGraph - Class in org.gcube.contentmanagement.graphtools.plotting.graphs

PieGraph(String) - Constructor for class org.gcube.contentmanagement.graphtools.plotting.graphs.PieGraph

PMax - Variable in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.AquamapsEnvelope

PMin - Variable in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.AquamapsEnvelope

Point<S extends Number,T extends Number> - Class in org.gcube.portlets.user.timeseries.charts.support.types

The Point consists of a single entry in the graph system.

Point(S) - Constructor for class org.gcube.portlets.user.timeseries.charts.support.types.Point

Point(String, S) - Constructor for class org.gcube.portlets.user.timeseries.charts.support.types.Point

Point(S, ValueEntry<T>...) - Constructor for class org.gcube.portlets.user.timeseries.charts.support.types.Point

Point(String, S, ValueEntry<T>...) - Constructor for class org.gcube.portlets.user.timeseries.charts.support.types.Point

points - Variable in class org.gcube.dataanalysis.ecoengine.clustering.DBScan

points2Double(List<Point<? extends Number, ? extends Number>>, int, int) - Static method in class org.gcube.contentmanagement.graphtools.utils.MathFunctions

populateData(int) - Static method in class org.gcube.portlets.user.timeseries.charts.support.tests.GenerateDataTest

populatemaxminlat(String, String, String) - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.MaxMinGenerator

populatemaxminlat2(String) - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.MaxMinGenerator

populateRelationWithCategories() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.DBObjectTranslator

postData(Reader, URL, Writer) - Static method in class org.gcube.contentmanagement.graphtools.utils.HttpRequest

Reads data from the data reader and posts it to a server via POST request. data - The data you want to send endpoint - The server's address output - writes the server's response to output

postJSonData(String, Object, Type) - Static method in class org.gcube.contentmanagement.graphtools.utils.HttpRequest

postProcess(boolean, boolean) - Method in class org.gcube.dataanalysis.ecoengine.interfaces.ActorNode

postprocess(AlgorithmConfiguration, Model) - Method in interface org.gcube.dataanalysis.ecoengine.interfaces.Model

postProcess() - Method in interface org.gcube.dataanalysis.ecoengine.interfaces.SpatialProbabilityDistributionGeneric

postProcess(boolean, boolean) - Method in class org.gcube.dataanalysis.ecoengine.interfaces.SpatialProbabilityDistributionNode

postProcess() - Method in interface org.gcube.dataanalysis.ecoengine.interfaces.SpatialProbabilityDistributionTable

postprocess(AlgorithmConfiguration, Model) - Method in class org.gcube.dataanalysis.ecoengine.models.ModelAquamapsNN

postprocess(AlgorithmConfiguration, Model) - Method in class org.gcube.dataanalysis.ecoengine.models.ModelAquamapsNNNS

postprocess(AlgorithmConfiguration, Model) - Method in class org.gcube.dataanalysis.ecoengine.models.ModelHSPEN

postProcess() - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.AquamapsSuitable

postProcess() - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.BayesianDistribution

postProcess() - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.DummyAlgorithm

postProcess() - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.TestAlgorithm

postProcess() - Method in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsDuplicatesDeleter

postProcess() - Method in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsMerger

PrCentersFD(int) - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Print centers for debug.

prepareFinalTable() - Method in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsDuplicatesDeleter

prepareFinalTable() - Method in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsInSeaOnEarth

prepareFinalTable() - Method in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsIntersector

prepareFinalTable() - Method in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsMerger

preprocessObjects(Object[]) - Static method in class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.Neural_Network

preprocessObjects(double[]) - Static method in class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.Neural_Network

preprocessObjects(Object[]) - Static method in class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.neurosolutions.NeuralNet

presenceTable - Variable in class org.gcube.dataanalysis.ecoengine.models.ModelAquamapsNN

PresetConfigGenerator - Class in org.gcube.dataanalysis.ecoengine.utils

PresetConfigGenerator() - Constructor for class org.gcube.dataanalysis.ecoengine.utils.PresetConfigGenerator

prevweight - Variable in class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.neurosolutions.Synapse

PrimitiveType - Class in org.gcube.dataanalysis.ecoengine.datatypes

PrimitiveType(String, Object, PrimitiveTypes, String, String, String, boolean) - Constructor for class org.gcube.dataanalysis.ecoengine.datatypes.PrimitiveType

PrimitiveType(String, Object, PrimitiveTypes, String, String, String) - Constructor for class org.gcube.dataanalysis.ecoengine.datatypes.PrimitiveType

PrimitiveType(String, Object, PrimitiveTypes, String, String) - Constructor for class org.gcube.dataanalysis.ecoengine.datatypes.PrimitiveType

PrimitiveTypes - Enum in org.gcube.dataanalysis.ecoengine.datatypes.enumtypes

PrimitiveTypesList - Class in org.gcube.dataanalysis.ecoengine.datatypes

PrimitiveTypesList(String, PrimitiveTypes, String, String, boolean) - Constructor for class org.gcube.dataanalysis.ecoengine.datatypes.PrimitiveTypesList

PrincipalComponentAnalysis - Class in org.gcube.dataanalysis.ecoengine.models.cores.pca

PrincipalComponentAnalysis() - Constructor for class org.gcube.dataanalysis.ecoengine.models.cores.pca.PrincipalComponentAnalysis

printStackTrace(Exception) - Static method in class org.gcube.contentmanagement.lexicalmatcher.utils.AnalysisLogger

probabilityBuffer - Variable in class org.gcube.dataanalysis.ecoengine.processing.LocalSimpleSplitGenerator

probabilityDates(Calendar, Calendar) - Method in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsMerger

probabilityStrings(String, String) - Method in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsMerger

process(ComputationalAgent) - Static method in class org.gcube.dataanalysis.ecoengine.test.regression.Regressor

processedRecords - Variable in class org.gcube.dataanalysis.ecoengine.interfaces.DataAnalysis

processedRecordsCounter - Variable in class org.gcube.dataanalysis.ecoengine.processing.LocalSimpleSplitGenerator

processedspecies - Variable in class org.gcube.dataanalysis.ecoengine.connectors.RemoteHspecOutputObject.Metric

processedSpeciesCounter - Variable in class org.gcube.dataanalysis.ecoengine.processing.LocalSimpleSplitGenerator

ProcessorsFactory - Class in org.gcube.dataanalysis.ecoengine.processing.factories

ProcessorsFactory() - Constructor for class org.gcube.dataanalysis.ecoengine.processing.factories.ProcessorsFactory

procFAO_2050(String) - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.AquamapsAlgorithmCore

produceCharts(HashMap<String, HashMap<String, double[]>>, String[]) - Method in class org.gcube.dataanalysis.ecoengine.evaluation.bioclimate.BioClimateAnalysis

producedImages - Variable in class org.gcube.dataanalysis.ecoengine.transducers.BioClimateHSPECTransducer

produceGraphs2D() - Method in class org.gcube.dataanalysis.ecoengine.evaluation.bioclimate.BioClimateAnalysis

produceSamples(double[][]) - Method in class org.gcube.dataanalysis.ecoengine.clustering.DBScan

ProduceTestMap - Class in org.gcube.dataanalysis.ecoengine.evaluation.bioclimate

ProduceTestMap() - Constructor for class org.gcube.dataanalysis.ecoengine.evaluation.bioclimate.ProduceTestMap

ProduceTestMap - Class in org.gcube.dataanalysis.ecoengine.test

ProduceTestMap() - Constructor for class org.gcube.dataanalysis.ecoengine.test.ProduceTestMap

propagate(double[]) - Method in class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.Neural_Network

Q

query - Variable in class org.gcube.dataanalysis.ecoengine.transducers.QueryExecutor

QueryExecutor - Class in org.gcube.dataanalysis.ecoengine.transducers

QueryExecutor() - Constructor for class org.gcube.dataanalysis.ecoengine.transducers.QueryExecutor

R

R_HIGH - Static variable in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Index in ranges for HIGH.

R_LOW - Static variable in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Index in ranges for LOW.

R_WIDTH - Static variable in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Index in ranges for WIDTH.

RadarGraph - Class in org.gcube.contentmanagement.graphtools.plotting.graphs

RadarGraph(String) - Constructor for class org.gcube.contentmanagement.graphtools.plotting.graphs.RadarGraph

RainyCloudGenerator - Class in org.gcube.dataanalysis.ecoengine.processing

RainyCloudGenerator(AlgorithmConfiguration) - Constructor for class org.gcube.dataanalysis.ecoengine.processing.RainyCloudGenerator

RainyCloudGenerator() - Constructor for class org.gcube.dataanalysis.ecoengine.processing.RainyCloudGenerator

random - Variable in class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.neurosolutions.Randomizer

Randomizer - Class in org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.neurosolutions

Randomizer() - Constructor for class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.neurosolutions.Randomizer

Randomizer(long) - Constructor for class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.neurosolutions.Randomizer

randomTake - Variable in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.LexicalEngineConfiguration

RapidMinerOperatorsFile - Static variable in class org.gcube.dataanalysis.ecoengine.configuration.AlgorithmConfiguration

readXMLDoc(String) - Static method in class org.gcube.contentmanagement.lexicalmatcher.utils.FileTools

recomputeCenters(Instances, int[][], Instances) - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Recompute the new centers.

recomputeCentersFast(Instances, int[][], Instances) - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Recompute the new centers - 2nd version Same as recomputeCenters, but does not check if center stays the same.

recordedby - Variable in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsMerger.OccurrenceRecord

recordedByColumn - Static variable in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsMerger

recordedByFld - Variable in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsMerger

records_left - Variable in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsMerger

records_right - Variable in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsMerger

reduceDimension(List<Point<? extends Number, ? extends Number>>) - Static method in class org.gcube.contentmanagement.graphtools.data.conversions.GraphConverter2D

Reference - Interface in org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.interfaces

Reference - Static variable in class org.gcube.dataanalysis.ecoengine.models.FeedForwardNN

Reference - Static variable in class org.gcube.dataanalysis.ecoengine.models.testing.FeedForwardNNFile

ReferenceChunk - Class in org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.chunks

ReferenceChunk(String, String, BigInteger, int, Engine) - Constructor for class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.chunks.ReferenceChunk

ReferenceChunkSet - Class in org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.chunks

ReferenceChunkSet(int, int, String, String, LexicalEngineConfiguration, Engine) - Constructor for class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.chunks.ReferenceChunkSet

ReferenceChunkSet(int, int, String, String, BigInteger, LexicalEngineConfiguration, Engine) - Constructor for class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.chunks.ReferenceChunkSet

ReferenceChunksToTake - Variable in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.LexicalEngineConfiguration

referenceColumn - Variable in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.LexicalEngineConfiguration

referenceCriteria - Variable in class org.gcube.dataanalysis.ecoengine.test.TablesComparison

referenceCriteria - Variable in class org.gcube.dataanalysis.ecoengine.utils.HspecDiscrepanciesCalculator

referenceCriteria - Variable in class org.gcube.dataanalysis.ecoengine.utils.TablesDiscrepanciesCalculator

referencedbConnection - Variable in class org.gcube.dataanalysis.ecoengine.evaluation.bioclimate.BioClimateAnalysis

referencedbConnection - Variable in class org.gcube.dataanalysis.ecoengine.evaluation.bioclimate.InterpolateTables

referencedbConnection - Variable in class org.gcube.dataanalysis.ecoengine.test.TablesComparison

referencedbConnection - Variable in class org.gcube.dataanalysis.ecoengine.utils.HspecDiscrepanciesCalculator

referencedbConnection - Variable in class org.gcube.dataanalysis.ecoengine.utils.TablesDiscrepanciesCalculator

referenceSelectedColumns - Variable in class org.gcube.dataanalysis.ecoengine.test.TablesComparison

referenceSelectedColumns - Variable in class org.gcube.dataanalysis.ecoengine.utils.HspecDiscrepanciesCalculator

referenceSelectedColumns - Variable in class org.gcube.dataanalysis.ecoengine.utils.TablesDiscrepanciesCalculator

referenceTable - Variable in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.LexicalEngineConfiguration

referenceTable - Variable in class org.gcube.dataanalysis.ecoengine.test.TablesComparison

referenceTable - Variable in class org.gcube.dataanalysis.ecoengine.utils.HspecDiscrepanciesCalculator

referenceTable - Variable in class org.gcube.dataanalysis.ecoengine.utils.TablesDiscrepanciesCalculator

refreshReferences() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.run.CategoryGuesser

refreshResourcesTime - Static variable in class org.gcube.dataanalysis.ecoengine.configuration.AlgorithmConfiguration

RegressionComplexGeneration - Class in org.gcube.dataanalysis.ecoengine.test.checks

RegressionComplexGeneration() - Constructor for class org.gcube.dataanalysis.ecoengine.test.checks.RegressionComplexGeneration

RegressionComplexGeneration.ThreadCalculator - Class in org.gcube.dataanalysis.ecoengine.test.checks

RegressionComplexGeneration.ThreadCalculator(ComputationalAgent) - Constructor for class org.gcube.dataanalysis.ecoengine.test.checks.RegressionComplexGeneration.ThreadCalculator

RegressionSimpleGeneration - Class in org.gcube.dataanalysis.ecoengine.test.checks

RegressionSimpleGeneration() - Constructor for class org.gcube.dataanalysis.ecoengine.test.checks.RegressionSimpleGeneration

RegressionSimpleGeneration.ThreadCalculator - Class in org.gcube.dataanalysis.ecoengine.test.checks

RegressionSimpleGeneration.ThreadCalculator(ComputationalAgent) - Constructor for class org.gcube.dataanalysis.ecoengine.test.checks.RegressionSimpleGeneration.ThreadCalculator

RegressionTestAllGraphs - Class in org.gcube.contentmanagement.graphtools.tests

RegressionTestAllGraphs() - Constructor for class org.gcube.contentmanagement.graphtools.tests.RegressionTestAllGraphs

RegressionTestClusterers - Class in org.gcube.dataanalysis.ecoengine.test.regression

RegressionTestClusterers() - Constructor for class org.gcube.dataanalysis.ecoengine.test.regression.RegressionTestClusterers

RegressionTestEvaluators - Class in org.gcube.dataanalysis.ecoengine.test.regression

RegressionTestEvaluators() - Constructor for class org.gcube.dataanalysis.ecoengine.test.regression.RegressionTestEvaluators

RegressionTestGenerators - Class in org.gcube.dataanalysis.ecoengine.test.regression

RegressionTestGenerators() - Constructor for class org.gcube.dataanalysis.ecoengine.test.regression.RegressionTestGenerators

RegressionTestModelers - Class in org.gcube.dataanalysis.ecoengine.test.regression

RegressionTestModelers() - Constructor for class org.gcube.dataanalysis.ecoengine.test.regression.RegressionTestModelers

RegressionTestTransducers - Class in org.gcube.dataanalysis.ecoengine.test.regression

RegressionTestTransducers() - Constructor for class org.gcube.dataanalysis.ecoengine.test.regression.RegressionTestTransducers

Regressor - Class in org.gcube.dataanalysis.ecoengine.test.regression

Regressor() - Constructor for class org.gcube.dataanalysis.ecoengine.test.regression.Regressor

Regressor.ThreadCalculator - Class in org.gcube.dataanalysis.ecoengine.test.regression

Regressor.ThreadCalculator(ComputationalAgent) - Constructor for class org.gcube.dataanalysis.ecoengine.test.regression.Regressor.ThreadCalculator

RelationEdge - Class in org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data

RelationEdge(String, String, String) - Constructor for class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.RelationEdge

RelationEdge - Class in org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.graph

RelationEdge(String, long, long) - Constructor for class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.graph.RelationEdge

relations - Variable in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.DBObjectTranslator

RemoteGenerationManager - Class in org.gcube.dataanalysis.ecoengine.connectors

RemoteGenerationManager(String) - Constructor for class org.gcube.dataanalysis.ecoengine.connectors.RemoteGenerationManager

RemoteHspecInputObject - Class in org.gcube.dataanalysis.ecoengine.connectors

RemoteHspecInputObject() - Constructor for class org.gcube.dataanalysis.ecoengine.connectors.RemoteHspecInputObject

RemoteHspecInputObject.Table - Class in org.gcube.dataanalysis.ecoengine.connectors

RemoteHspecInputObject.Table() - Constructor for class org.gcube.dataanalysis.ecoengine.connectors.RemoteHspecInputObject.Table

RemoteHspecOutputObject - Class in org.gcube.dataanalysis.ecoengine.connectors

RemoteHspecOutputObject() - Constructor for class org.gcube.dataanalysis.ecoengine.connectors.RemoteHspecOutputObject

RemoteHspecOutputObject.Metric - Class in org.gcube.dataanalysis.ecoengine.connectors

RemoteHspecOutputObject.Metric() - Constructor for class org.gcube.dataanalysis.ecoengine.connectors.RemoteHspecOutputObject.Metric

render(Dataset) - Method in class org.gcube.contentmanagement.graphtools.abstracts.GenericStandaloneGraph

render(double, double, Dataset) - Method in class org.gcube.contentmanagement.graphtools.abstracts.GenericStandaloneGraph

renderGraphGroup(GraphGroups) - Method in class org.gcube.contentmanagement.graphtools.abstracts.GenericStandaloneGraph

renderGraphGroupImage(int, int, GraphGroups) - Method in class org.gcube.contentmanagement.graphtools.abstracts.GenericStandaloneGraph

renderImages(String, int, int, GraphGroups) - Method in class org.gcube.contentmanagement.graphtools.abstracts.GenericStandaloneGraph

renderImgObject(int, int, Dataset) - Method in class org.gcube.contentmanagement.graphtools.abstracts.GenericStandaloneGraph

renderStaticImgObject(int, int, Dataset, String, double, double) - Static method in class org.gcube.dataanalysis.ecoengine.evaluation.bioclimate.BioClimateGraph

reorder(List<Point<? extends Number, ? extends Number>>) - Static method in class org.gcube.contentmanagement.graphtools.data.conversions.GraphConverter2D

resetEngine(LexicalEngineConfiguration, String, String) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.Engine

resetFilters() - Method in class org.gcube.contentmanagement.graphtools.core.StatisticsGenerator

resId - Variable in class org.gcube.dataanalysis.ecoengine.connectors.livemonitor.SingleResource

ResourceFactory - Class in org.gcube.dataanalysis.ecoengine.utils

ResourceFactory() - Constructor for class org.gcube.dataanalysis.ecoengine.utils.ResourceFactory

ResourceLoad - Class in org.gcube.dataanalysis.ecoengine.connectors.livemonitor

ResourceLoad(long, double) - Constructor for class org.gcube.dataanalysis.ecoengine.connectors.livemonitor.ResourceLoad

resourceManager - Variable in class org.gcube.dataanalysis.ecoengine.interfaces.DataAnalysis

Resources - Class in org.gcube.dataanalysis.ecoengine.connectors.livemonitor

Resources() - Constructor for class org.gcube.dataanalysis.ecoengine.connectors.livemonitor.Resources

resources - Variable in class org.gcube.dataanalysis.ecoengine.connectors.RemoteHspecOutputObject.Metric

restoreConfig(String) - Static method in class org.gcube.dataanalysis.ecoengine.utils.Transformations

resultString(String, String, String) - Static method in class org.gcube.contentmanagement.lexicalmatcher.analysis.run.CategoryGuesser

retrieveCompleteStatus() - Method in class org.gcube.dataanalysis.ecoengine.connectors.RemoteGenerationManager

retrieveCompletion() - Method in class org.gcube.dataanalysis.ecoengine.connectors.RemoteGenerationManager

retrieveEntries(SessionFactory, String, BigInteger, int) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.DBObjectTranslator

retrieveTimeSeriesEntries(SessionFactory, String, String, BigInteger, int) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.DBObjectTranslator

rightRows - Variable in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsMerger

rightTableName - Variable in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsMerger

rightTableNameF - Static variable in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsMerger

rollback(Session) - Static method in class org.gcube.contentmanagement.lexicalmatcher.utils.DatabaseFactory

rollback(Session) - Static method in class org.gcube.dataanalysis.ecoengine.utils.DatabaseFactory

round(double) - Static method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.AquamapsEnvelope

roundDecimal(double, int) - Static method in class org.gcube.contentmanagement.graphtools.utils.MathFunctions

row2OccurrenceRecord(Object[]) - Method in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsMerger

rows - Variable in class org.gcube.dataanalysis.ecoengine.clustering.DBScan

run() - Method in class org.gcube.dataanalysis.ecoengine.test.checks.RegressionComplexGeneration.ThreadCalculator

run() - Method in class org.gcube.dataanalysis.ecoengine.test.checks.RegressionSimpleGeneration.ThreadCalculator

run() - Method in class org.gcube.dataanalysis.ecoengine.test.checks.TestClusterer.ThreadCalculator

run() - Method in class org.gcube.dataanalysis.ecoengine.test.checks.TestEvaluation.ThreadCalculator

run() - Method in class org.gcube.dataanalysis.ecoengine.test.checks.TestsHSPENTraining.ThreadCalculator

run() - Method in class org.gcube.dataanalysis.ecoengine.test.regression.Regressor.ThreadCalculator

run() - Method in class org.gcube.dataanalysis.ecoengine.user.EvaluatorT

run() - Method in class org.gcube.dataanalysis.ecoengine.user.GeneratorT

run() - Method in class org.gcube.dataanalysis.ecoengine.user.ModelerT

runGuesser(String, String, LexicalEngineConfiguration) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.run.CategoryGuesser

runGuesser(String, String) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.run.CategoryGuesser

runGuesser(String, String, LexicalEngineConfiguration, String, String) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.run.CategoryGuesser

runGuesser(String, LexicalEngineConfiguration, String, String) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.run.CategoryGuesser

runGuesser(String, String, LexicalEngineConfiguration, String, String, String) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.run.CategoryGuesser

RunMain() - Static method in class org.gcube.contentmanagement.lexicalmatcher.analysis.run.StarGraphExtraction

runTest() - Method in class org.gcube.dataanalysis.ecoengine.test.TablesComparison

runTest() - Method in class org.gcube.dataanalysis.ecoengine.utils.HspecDiscrepanciesCalculator

runTest() - Method in class org.gcube.dataanalysis.ecoengine.utils.TablesDiscrepanciesCalculator

S

salinityDefaultRange - Static variable in class org.gcube.dataanalysis.ecoengine.evaluation.bioclimate.BioClimateAnalysis

salinityMinFeature - Static variable in class org.gcube.dataanalysis.ecoengine.evaluation.bioclimate.BioClimateAnalysis

salva(String, Neural_Network) - Static method in class org.gcube.dataanalysis.ecoengine.test.neuralnetwork.TestNN

sampleAnotationByRange(List<Point<? extends Number, ? extends Number>>, int) - Static method in class org.gcube.contentmanagement.graphtools.data.conversions.GraphConverter2D

sampleAnotationBySameFollower(List<Point<? extends Number, ? extends Number>>) - Static method in class org.gcube.contentmanagement.graphtools.data.conversions.GraphConverter2D

SamplesTable - Class in org.gcube.contentmanagement.graphtools.abstracts

SamplesTable() - Constructor for class org.gcube.contentmanagement.graphtools.abstracts.SamplesTable

samplesVector - Variable in class org.gcube.dataanalysis.ecoengine.clustering.DBScan

save(String, Neural_Network) - Static method in class org.gcube.dataanalysis.ecoengine.models.ModelAquamapsNN

save(String, NeuralNet) - Static method in class org.gcube.dataanalysis.ecoengine.models.ModelAquamapsNNNS

SaveConfig(String) - Method in class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.neurosolutions.NeuralNet

saveObject(Object, SessionFactory) - Static method in class org.gcube.contentmanagement.lexicalmatcher.utils.DatabaseFactory

saveObject(Object, SessionFactory) - Static method in class org.gcube.dataanalysis.ecoengine.utils.DatabaseFactory

saveString(String, String, boolean, String) - Static method in class org.gcube.contentmanagement.lexicalmatcher.utils.FileTools

saveString2File(String, String) - Static method in class org.gcube.contentmanagement.lexicalmatcher.utils.FileTools

SaveWeights(String) - Method in class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.neurosolutions.NeuralNet

scalarProduct(double[], double[]) - Static method in class org.gcube.dataanalysis.ecoengine.utils.Operations

ScatterGraphGeneric - Class in org.gcube.contentmanagement.graphtools.plotting.graphs

ScatterGraphGeneric(String) - Constructor for class org.gcube.contentmanagement.graphtools.plotting.graphs.ScatterGraphGeneric

ScatterGraphNumeric - Class in org.gcube.contentmanagement.graphtools.plotting.graphs

ScatterGraphNumeric(String) - Constructor for class org.gcube.contentmanagement.graphtools.plotting.graphs.ScatterGraphNumeric

scientificName - Variable in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsMerger.OccurrenceRecord

scientificNameColumn - Static variable in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsMerger

scientificNameFld - Variable in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsMerger

scoresTable - Variable in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.Engine

selectDestElementsQuery - Static variable in class org.gcube.dataanalysis.ecoengine.evaluation.bioclimate.InterpolateTables

selectDestElementsQuery - Static variable in class org.gcube.dataanalysis.ecoengine.utils.HspecDiscrepanciesCalculator

selected - Variable in class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.neurosolutions.Pattern

selectElementsQuery - Static variable in class org.gcube.dataanalysis.ecoengine.evaluation.bioclimate.InterpolateTables

selectElementsQuery - Static variable in class org.gcube.dataanalysis.ecoengine.test.TablesComparison

selectElementsQuery - Static variable in class org.gcube.dataanalysis.ecoengine.utils.HspecDiscrepanciesCalculator

selectElementsQuery - Static variable in class org.gcube.dataanalysis.ecoengine.utils.TablesDiscrepanciesCalculator

sendGetRequest(String, String) - Static method in class org.gcube.contentmanagement.graphtools.utils.HttpRequest

Sends an HTTP GET request to a url

sendPostRequest(String, String) - Static method in class org.gcube.contentmanagement.graphtools.utils.HttpRequest

serialVersionUID - Static variable in class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.Neuron

seriesColumn - Variable in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.chunks.ChunkSet

seriesName - Variable in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.chunks.ChunkSet

serviceParameter - Variable in class org.gcube.dataanalysis.ecoengine.datatypes.ServiceType

ServiceParameters - Enum in org.gcube.dataanalysis.ecoengine.datatypes.enumtypes

ServiceType - Class in org.gcube.dataanalysis.ecoengine.datatypes

ServiceType(ServiceParameters, String, String, String, boolean) - Constructor for class org.gcube.dataanalysis.ecoengine.datatypes.ServiceType

ServiceType(ServiceParameters, String, String, String) - Constructor for class org.gcube.dataanalysis.ecoengine.datatypes.ServiceType

ServiceType(ServiceParameters, String, String) - Constructor for class org.gcube.dataanalysis.ecoengine.datatypes.ServiceType

setAcceptanceThreshold(double) - Method in class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.Neural_Network

setAgent(String) - Method in class org.gcube.dataanalysis.ecoengine.configuration.AlgorithmConfiguration

setAlias(String) - Method in class org.gcube.portlets.user.timeseries.charts.support.tablemodel.FieldDescr

The alias name is the label used to identify the column.

setAlias(String) - Method in class org.gcube.portlets.user.timeseries.charts.support.tablemodel.TableDescr

setAxisLabelGap(double) - Method in class org.gcube.contentmanagement.graphtools.plotting.demo.SpiderWebPlot

Sets the axis label gap and sends a PlotChangeEvent to all registered listeners.

setAxisLinePaint(Paint) - Method in class org.gcube.contentmanagement.graphtools.plotting.demo.SpiderWebPlot

Sets the paint used to draw the axis lines and sends a PlotChangeEvent to all registered listeners.

setAxisLineStroke(Stroke) - Method in class org.gcube.contentmanagement.graphtools.plotting.demo.SpiderWebPlot

Sets the stroke used to draw the axis lines and sends a PlotChangeEvent to all registered listeners.

setBaseSeriesOutlinePaint(Paint) - Method in class org.gcube.contentmanagement.graphtools.plotting.demo.SpiderWebPlot

Sets the base series paint.

setBaseSeriesOutlineStroke(Stroke) - Method in class org.gcube.contentmanagement.graphtools.plotting.demo.SpiderWebPlot

Sets the base series stroke.

setBaseSeriesPaint(Paint) - Method in class org.gcube.contentmanagement.graphtools.plotting.demo.SpiderWebPlot

Sets the base series paint.

setBinValue(double) - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Sets the distance value between true and false of binary attributes.

setCachePath(String) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.EngineConfiguration

setCategory(String) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.SingleResult

setCategoryDiscardDifferencialThreshold(float) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.LexicalEngineConfiguration

setCategoryDiscardThreshold(float) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.LexicalEngineConfiguration

setCategoryElements(BigInteger) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.CategoryScores

setCategoryFrom(String) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.RelationEdge

setCategoryFrom(String) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.graph.RelationEdge

setCategoryName(String) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.chunks.ReferenceChunk

setCategoryTable(HashMap<String, Reference>) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.CategoryOrderedList

setCategoryTo(String) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.RelationEdge

setCategoryTo(String) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.graph.RelationEdge

setChunkSize(int) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.LexicalEngineConfiguration

setChunkSize(int) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.chunks.ChunkSet

setClassName(String) - Method in class org.gcube.dataanalysis.ecoengine.datatypes.PrimitiveType

setColumn(String) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.SingleResult

setConfigPath(String) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.EngineConfiguration

setConfigPath(String) - Method in class org.gcube.dataanalysis.ecoengine.configuration.AlgorithmConfiguration

setConfiguration(AlgorithmConfiguration) - Method in class org.gcube.dataanalysis.ecoengine.clustering.DBScan

setConfiguration(AlgorithmConfiguration) - Method in class org.gcube.dataanalysis.ecoengine.clustering.KMeans

setConfiguration(AlgorithmConfiguration) - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeansWrapper

setConfiguration(AlgorithmConfiguration) - Method in interface org.gcube.dataanalysis.ecoengine.interfaces.ComputationalAgent

setConfiguration(AlgorithmConfiguration) - Method in class org.gcube.dataanalysis.ecoengine.interfaces.DataAnalysis

setConfiguration(AlgorithmConfiguration) - Method in class org.gcube.dataanalysis.ecoengine.modeling.SimpleModeler

setConfiguration(AlgorithmConfiguration) - Method in class org.gcube.dataanalysis.ecoengine.processing.LocalSimpleSplitGenerator

setConfiguration(AlgorithmConfiguration) - Method in class org.gcube.dataanalysis.ecoengine.processing.LocalSplitGenerator

setConfiguration(AlgorithmConfiguration) - Method in class org.gcube.dataanalysis.ecoengine.processing.RainyCloudGenerator

setConfiguration(AlgorithmConfiguration) - Method in class org.gcube.dataanalysis.ecoengine.transducers.BioClimateHSPECTransducer

setConfiguration(AlgorithmConfiguration) - Method in class org.gcube.dataanalysis.ecoengine.transducers.InterpolationTransducer

setConfiguration(AlgorithmConfiguration) - Method in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsMerger

setConfiguration(AlgorithmConfiguration) - Method in class org.gcube.dataanalysis.ecoengine.transducers.QueryExecutor

setConfiguration(AlgorithmConfiguration) - Method in class org.gcube.dataanalysis.ecoengine.transducers.TestTrans

setContent(Object) - Method in class org.gcube.dataanalysis.ecoengine.datatypes.PrimitiveType

setCoordinates(Coordinates) - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.Hspen

setCreateTable(Boolean) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.EngineConfiguration

setCsquareCode(String) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.EngineConfiguration

setCsquareCode(String) - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.OccurrencePoint

setCutOffFactor(double) - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Sets a new cutoff factor.

setCycles(double) - Method in class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.Neural_Network

setDatabaseAutomaticTestTable(String) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.EngineConfiguration

setDatabaseAutomaticTestTable(String) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.LexicalEngineConfiguration

setDatabaseDialect(String) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.EngineConfiguration

setDatabaseDialect(String) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.LexicalEngineConfiguration

setDatabaseDriver(String) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.EngineConfiguration

setDatabaseDriver(String) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.LexicalEngineConfiguration

setDatabaseIdleConnectionTestPeriod(String) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.EngineConfiguration

setDatabaseIdleConnectionTestPeriod(String) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.LexicalEngineConfiguration

setDatabaseParameter(DatabaseParameters) - Method in class org.gcube.dataanalysis.ecoengine.datatypes.DatabaseType

setDatabasePassword(String) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.EngineConfiguration

setDatabasePassword(String) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.LexicalEngineConfiguration

setDatabaseURL(String) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.EngineConfiguration

setDatabaseURL(String) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.LexicalEngineConfiguration

setDatabaseUserName(String) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.EngineConfiguration

setDatabaseUserName(String) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.LexicalEngineConfiguration

setDataExtractOrder(TableOrder) - Method in class org.gcube.contentmanagement.graphtools.plotting.demo.SpiderWebPlot

Sets the data extract order (by row or by column) and sends a PlotChangeEventto all registered listeners.

setDataset(CategoryDataset) - Method in class org.gcube.contentmanagement.graphtools.plotting.demo.SpiderWebPlot

Sets the dataset used by the plot and sends a PlotChangeEvent to all registered listeners.

setDebugLevel(int) - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Sets the debug level.

setDebugVectorsFile(File) - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Sets the file that has the random vectors stored.

setDefaultValue(String) - Method in class org.gcube.dataanalysis.ecoengine.datatypes.StatisticalType

setDepth(Envelope) - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.Hspen

setDescription(String) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.LexicalEngineConfiguration

setDescription(String) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.Category

setDescription(String) - Method in interface org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.interfaces.Reference

setDescription(String) - Method in class org.gcube.dataanalysis.ecoengine.datatypes.StatisticalType

setDirection(Rotation) - Method in class org.gcube.contentmanagement.graphtools.plotting.demo.SpiderWebPlot

Sets the direction in which the radar axes are drawn and sends a PlotChangeEvent to all registered listeners.

setDistanceF(DistanceFunction) - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

gets the "binary" distance value.

setDistributionTable(String) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.EngineConfiguration

setEdges(Object, Object) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.graph.CustomWeightedEdge

setEdgeWeight(E, double) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.graph.CustomListenableDirectedWeightedGraph

setEMostLong(String) - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.Coordinates

setEndpoints(List<String>) - Method in class org.gcube.dataanalysis.ecoengine.configuration.AlgorithmConfiguration

setEntries(ValueEntry<T>...) - Method in class org.gcube.portlets.user.timeseries.charts.support.types.Point

setEntryAcceptanceThreshold(float) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.LexicalEngineConfiguration

setEnvelopes(List<Envelope>) - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.EnvelopeSet

setEnvelopeString(String) - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.EnvelopeSet

setFamilyID(String) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.SingleResult

setFaoAreas(String) - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.Hspen

setFirstElement(String) - Method in class org.gcube.contentmanagement.graphtools.core.filters.Filter

setGcubeScope(String) - Method in class org.gcube.dataanalysis.ecoengine.configuration.AlgorithmConfiguration

setGeneralProperties(HashMap<String, String>) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.EngineConfiguration

setGeneralProperties(HashMap<String, String>) - Method in class org.gcube.dataanalysis.ecoengine.configuration.AlgorithmConfiguration

setHcafTable(String) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.EngineConfiguration

setHeadPercent(double) - Method in class org.gcube.contentmanagement.graphtools.plotting.demo.SpiderWebPlot

Sets the head percent and sends a PlotChangeEvent to all registered listeners.

setHspenTable(String) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.EngineConfiguration

setIceConcentration(Envelope) - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.Hspen

setIdColumn(String) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.LexicalEngineConfiguration

setIndex(String) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.Category

setIndex(String) - Method in interface org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.interfaces.Reference

setInputCenterFile(File) - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Sets the file to read the list of centers from.

setInteriorGap(double) - Method in class org.gcube.contentmanagement.graphtools.plotting.demo.SpiderWebPlot

Sets the interior gap and sends a PlotChangeEvent to all registered listeners.

setKDTree(KDTree) - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Sets the KDTree class.

setLabel(String) - Method in class org.gcube.portlets.user.timeseries.charts.support.types.Point

setLabel(String) - Method in class org.gcube.portlets.user.timeseries.charts.support.types.ValueEntry

setLabelFont(Font) - Method in class org.gcube.contentmanagement.graphtools.plotting.demo.SpiderWebPlot

Sets the series label font and sends a PlotChangeEvent to all registered listeners.

setLabelGenerator(CategoryItemLabelGenerator) - Method in class org.gcube.contentmanagement.graphtools.plotting.demo.SpiderWebPlot

Sets the label generator and sends a PlotChangeEvent to all registered listeners.

setLabelPaint(Paint) - Method in class org.gcube.contentmanagement.graphtools.plotting.demo.SpiderWebPlot

Sets the series label paint and sends a PlotChangeEvent to all registered listeners.

setLandDistance(Envelope) - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.Hspen

setLandDistanceYN(boolean) - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.Hspen

setLayer(String) - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.Hspen

setLegendItemShape(Shape) - Method in class org.gcube.contentmanagement.graphtools.plotting.demo.SpiderWebPlot

Sets the shape used for legend items and sends a PlotChangeEvent to all registered listeners.

setListSeparator(String) - Static method in class org.gcube.dataanalysis.ecoengine.configuration.AlgorithmConfiguration

setLogger(String) - Static method in class org.gcube.contentmanagement.lexicalmatcher.utils.AnalysisLogger

setMax(String) - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.Envelope

setMaxCenterLat(String) - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.Coordinates

setMaximumElements(BigDecimal) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.CategoryScoresOld

setMaxIterations(int) - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Sets the maximum number of iterations to perform.

setMaxKMeans(int) - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Set the maximum number of iterations to perform in KMeans.

setMaxKMeansForChildren(int) - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Sets the maximum number of iterations KMeans that is performed on the child centers.

setMaxminLatTable(String) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.EngineConfiguration

setMaxNumClusters(int) - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Sets the maximum number of clusters to generate.

setMaxValue(double) - Method in class org.gcube.contentmanagement.graphtools.plotting.demo.SpiderWebPlot

Sets the maximum value any category axis can take and sends a PlotChangeEvent to all registered listeners.

setMaxY(Number) - Method in class org.gcube.portlets.user.timeseries.charts.support.types.GraphData

setMeanDepth(String) - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.Hspen

setMin(String) - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.Envelope

setMinCenterLat(String) - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.Coordinates

setMinNumClusters(int) - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Sets the minimum number of clusters to generate.

setMinY(Number) - Method in class org.gcube.portlets.user.timeseries.charts.support.types.GraphData

setModel(String) - Method in class org.gcube.dataanalysis.ecoengine.configuration.AlgorithmConfiguration

setmodel(Model) - Method in interface org.gcube.dataanalysis.ecoengine.interfaces.Modeler

setmodel(Model) - Method in class org.gcube.dataanalysis.ecoengine.modeling.SimpleModeler

setName(String) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.Category

setName(String) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.RelationEdge

setName(String) - Method in interface org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.interfaces.Reference

setName(String) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.graph.RelationEdge

setName(String) - Method in class org.gcube.dataanalysis.ecoengine.datatypes.StatisticalType

setName(String) - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.Coordinates

setName(EnvelopeName) - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.Envelope

setName(String) - Method in class org.gcube.portlets.user.timeseries.charts.support.tablemodel.TableDescr

setNameHuman(String) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.LexicalEngineConfiguration

setNativeGeneration(Boolean) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.EngineConfiguration

setNMostLat(String) - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.Coordinates

setNumberOfElements(BigInteger) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.Category

setNumberOfElements(BigInteger) - Method in interface org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.interfaces.Reference

setNumberOfEntries(BigInteger) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.chunks.ChunkSet

setNumberOfResources(Integer) - Method in class org.gcube.dataanalysis.ecoengine.configuration.AlgorithmConfiguration

setNumberOfThreads(Integer) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.EngineConfiguration

setNumberOfThreadsToUse(int) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.LexicalEngineConfiguration

setOccurrenceCellsTable(String) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.EngineConfiguration

setOccurrenceMap(Map<String, List<OccurrencePoint>>) - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.OccurrencePointSets

SetOfReferenceChunkSet - Class in org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.chunks

SetOfReferenceChunkSet(ArrayList<Reference>, LexicalEngineConfiguration, Engine) - Constructor for class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.chunks.SetOfReferenceChunkSet

setOperator(String) - Method in class org.gcube.contentmanagement.graphtools.core.filters.Filter

setOptional(boolean) - Method in class org.gcube.dataanalysis.ecoengine.datatypes.StatisticalType

setOptions(String[]) - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Parses a given list of options.

setOrderedList(ArrayList<Reference>) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.CategoryOrderedList

setOriginHspenTable(String) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.EngineConfiguration

setOutputCenterFile(File) - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Sets file to write the list of centers to.

setParam(String, String) - Method in class org.gcube.dataanalysis.ecoengine.configuration.AlgorithmConfiguration

setPelagic(boolean) - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.Hspen

setPersistencePath(String) - Method in class org.gcube.dataanalysis.ecoengine.configuration.AlgorithmConfiguration

setPrefmax(String) - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.Envelope

setPrefmin(String) - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.Envelope

setPrimaryProduction(Envelope) - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.Hspen

setRandomTake(boolean) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.LexicalEngineConfiguration

setRawName(String) - Method in class org.gcube.portlets.user.timeseries.charts.support.tablemodel.FieldDescr

The rawName identifies the name of column on the table.

setReferenceChunksToTake(int) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.LexicalEngineConfiguration

setReferenceColumn(String) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.LexicalEngineConfiguration

setReferenceTable(String) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.LexicalEngineConfiguration

setRemoteCalculator(String) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.EngineConfiguration

setRemoteEnvironment(String) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.EngineConfiguration

setSalinity(Envelope) - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.Hspen

setScore(double) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.SingleResult

setSecondElement(String) - Method in class org.gcube.contentmanagement.graphtools.core.filters.Filter

setSeriesColumn(String) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.chunks.ChunkSet

setSeriesName(String) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.chunks.ChunkSet

setSeriesOutlinePaint(Paint) - Method in class org.gcube.contentmanagement.graphtools.plotting.demo.SpiderWebPlot

Sets the outline paint for ALL series in the plot.

setSeriesOutlinePaint(int, Paint) - Method in class org.gcube.contentmanagement.graphtools.plotting.demo.SpiderWebPlot

Sets the paint used to fill a series of the radar and sends a PlotChangeEvent to all registered listeners.

setSeriesOutlineStroke(Stroke) - Method in class org.gcube.contentmanagement.graphtools.plotting.demo.SpiderWebPlot

Sets the outline stroke for ALL series in the plot.

setSeriesOutlineStroke(int, Stroke) - Method in class org.gcube.contentmanagement.graphtools.plotting.demo.SpiderWebPlot

Sets the stroke used to fill a series of the radar and sends a PlotChangeEvent to all registered listeners.

setSeriesPaint(Paint) - Method in class org.gcube.contentmanagement.graphtools.plotting.demo.SpiderWebPlot

Sets the paint for ALL series in the plot.

setSeriesPaint(int, Paint) - Method in class org.gcube.contentmanagement.graphtools.plotting.demo.SpiderWebPlot

Sets the paint used to fill a series of the radar and sends a PlotChangeEvent to all registered listeners.

setServiceParameter(ServiceParameters) - Method in class org.gcube.dataanalysis.ecoengine.datatypes.ServiceType

setServiceUserName(String) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.EngineConfiguration

setSingleEntryRecognitionMaxDeviation(float) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.LexicalEngineConfiguration

setSMostLat(String) - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.Coordinates

setSpeciesID(String) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.EngineConfiguration

setSpeciesID(String) - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.Hspen

setSpeciesID(String) - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.OccurrencePoint

setStartAngle(double) - Method in class org.gcube.contentmanagement.graphtools.plotting.demo.SpiderWebPlot

Sets the starting angle and sends a PlotChangeEvent to all registered listeners.

setTableName(String) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.Category

setTablename(String) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.SingleResult

setTableName(String) - Method in interface org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.interfaces.Reference

setTableName(String) - Method in class org.gcube.dataanalysis.ecoengine.datatypes.ColumnType

setTableSpace(String) - Method in class org.gcube.dataanalysis.ecoengine.configuration.AlgorithmConfiguration

setTableStore(String) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.EngineConfiguration

setTemperature(Envelope) - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.Hspen

setTemplateNames(List<TableTemplates>) - Method in class org.gcube.dataanalysis.ecoengine.datatypes.InputTable

setThreshold(double) - Method in class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.Neural_Network

setTimeSeriesChunksToTake(int) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.LexicalEngineConfiguration

setToolTipGenerator(CategoryToolTipGenerator) - Method in class org.gcube.contentmanagement.graphtools.plotting.demo.SpiderWebPlot

Sets the tool tip generator for the plot and sends a PlotChangeEvent to all registered listeners.

setType(PrimitiveTypes) - Method in class org.gcube.dataanalysis.ecoengine.datatypes.PrimitiveType

setType2050(Boolean) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.EngineConfiguration

setup(AlgorithmConfiguration) - Method in class org.gcube.dataanalysis.ecoengine.interfaces.ActorNode

setup(AlgorithmConfiguration) - Method in class org.gcube.dataanalysis.ecoengine.interfaces.SpatialProbabilityDistributionNode

setupInnerLayers(int...) - Static method in class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.Neural_Network

setupInnerLayers(int...) - Static method in class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.neurosolutions.NeuralNet

setURLGenerator(CategoryURLGenerator) - Method in class org.gcube.contentmanagement.graphtools.plotting.demo.SpiderWebPlot

Sets the URL generator for the plot and sends a PlotChangeEvent to all registered listeners.

setUseDB(Boolean) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.EngineConfiguration

setUseKDTree(boolean) - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Sets whether to use the KDTree or not.

setUseSimpleDistance(boolean) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.LexicalEngineConfiguration

setValue(Double) - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.OccurrencePoint

setValue(S) - Method in class org.gcube.portlets.user.timeseries.charts.support.types.Point

setValue(T) - Method in class org.gcube.portlets.user.timeseries.charts.support.types.ValueEntry

setVersion(float) - Method in interface org.gcube.dataanalysis.ecoengine.interfaces.Model

setVersion(float) - Method in class org.gcube.dataanalysis.ecoengine.models.ModelAquamapsNN

setVersion(float) - Method in class org.gcube.dataanalysis.ecoengine.models.ModelAquamapsNNNS

setVersion(float) - Method in class org.gcube.dataanalysis.ecoengine.models.ModelHSPEN

setWebFilled(boolean) - Method in class org.gcube.contentmanagement.graphtools.plotting.demo.SpiderWebPlot

Sets the webFilled flag and sends a PlotChangeEvent to all registered listeners.

setWeight(double) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.graph.CustomWeightedEdge

setWeigth(BigInteger) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.RelationEdge

setWeigth(BigInteger) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.graph.RelationEdge

setWMostLong(String) - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.Coordinates

setWriteSummaryLog(Boolean) - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.EngineConfiguration

Sha1 - Class in org.gcube.dataanalysis.ecoengine.utils

Sha1() - Constructor for class org.gcube.dataanalysis.ecoengine.utils.Sha1

SHA1(String) - Static method in class org.gcube.dataanalysis.ecoengine.utils.Sha1

showResults(ArrayList<SingleResult>) - Static method in class org.gcube.contentmanagement.lexicalmatcher.analysis.run.CategoryGuesser

showScores() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.CategoryScores

shutdown() - Method in class org.gcube.dataanalysis.ecoengine.clustering.DBScan

shutdown() - Method in interface org.gcube.dataanalysis.ecoengine.interfaces.ComputationalAgent

shutdown() - Method in class org.gcube.dataanalysis.ecoengine.interfaces.DataAnalysis

shutdown() - Method in class org.gcube.dataanalysis.ecoengine.modeling.SimpleModeler

shutdown() - Method in class org.gcube.dataanalysis.ecoengine.processing.LocalSimpleSplitGenerator

shutdown() - Method in class org.gcube.dataanalysis.ecoengine.processing.LocalSplitGenerator

shutdown() - Method in class org.gcube.dataanalysis.ecoengine.processing.RainyCloudGenerator

shutdown() - Method in class org.gcube.dataanalysis.ecoengine.transducers.BioClimateHSPECTransducer

shutdown() - Method in class org.gcube.dataanalysis.ecoengine.transducers.InterpolationTransducer

shutdown() - Method in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsMerger

shutdown() - Method in class org.gcube.dataanalysis.ecoengine.transducers.QueryExecutor

shutdown() - Method in class org.gcube.dataanalysis.ecoengine.transducers.TestTrans

shutdownConnection() - Method in class org.gcube.dataanalysis.ecoengine.models.ModelHSPEN

SimpleModeler - Class in org.gcube.dataanalysis.ecoengine.modeling

SimpleModeler() - Constructor for class org.gcube.dataanalysis.ecoengine.modeling.SimpleModeler

singleEntryRecognitionMaxDeviation - Variable in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.LexicalEngineConfiguration

SingleResource - Class in org.gcube.dataanalysis.ecoengine.connectors.livemonitor

SingleResource(String, double) - Constructor for class org.gcube.dataanalysis.ecoengine.connectors.livemonitor.SingleResource

SingleResult - Class in org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data

SingleResult(String, String, double, String, String) - Constructor for class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.SingleResult

singleStepPostprocess(Object, Object) - Method in interface org.gcube.dataanalysis.ecoengine.interfaces.SpatialProbabilityDistributionGeneric

singleStepPostprocess(Object, Object) - Method in interface org.gcube.dataanalysis.ecoengine.interfaces.SpatialProbabilityDistributionTable

singleStepPostprocess(Object, Object) - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.AquamapsSuitable

singleStepPostprocess(Object, Object) - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.DummyAlgorithm

singleStepPostprocess(Object, Object) - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.FeedForwardNeuralNetworkDistribution

singleStepPostprocess(Object, Object) - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.TestAlgorithm

singleStepPreprocess(Object, Object) - Method in interface org.gcube.dataanalysis.ecoengine.interfaces.SpatialProbabilityDistributionGeneric

singleStepPreprocess(Object, Object) - Method in interface org.gcube.dataanalysis.ecoengine.interfaces.SpatialProbabilityDistributionTable

singleStepPreprocess(Object, Object) - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.AquamapsSuitable

singleStepPreprocess(Object, Object) - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.DummyAlgorithm

singleStepPreprocess(Object, Object) - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.FeedForwardNeuralNetworkDistribution

singleStepPreprocess(Object, Object) - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.TestAlgorithm

SingletonChunkSet - Class in org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.chunks

SingletonChunkSet(String, LexicalEngineConfiguration, Engine) - Constructor for class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.chunks.SingletonChunkSet

size() - Method in class org.gcube.contentmanagement.graphtools.data.BigSparseTable

sortEntries() - Method in class org.gcube.portlets.user.timeseries.charts.support.types.Point

sourceunit - Variable in class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.neurosolutions.Synapse

spaceVectorsNumber - Variable in class org.gcube.dataanalysis.ecoengine.processing.LocalSimpleSplitGenerator

SpatialProbabilityDistributionGeneric - Interface in org.gcube.dataanalysis.ecoengine.interfaces

SpatialProbabilityDistributionNode - Class in org.gcube.dataanalysis.ecoengine.interfaces

SpatialProbabilityDistributionNode() - Constructor for class org.gcube.dataanalysis.ecoengine.interfaces.SpatialProbabilityDistributionNode

SpatialProbabilityDistributionTable - Interface in org.gcube.dataanalysis.ecoengine.interfaces

spatialTolerance - Static variable in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsMerger

spatialToleranceValue - Variable in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsMerger

speciesEvolutionAnalysis(String[], String[], String, String) - Method in class org.gcube.dataanalysis.ecoengine.evaluation.bioclimate.BioClimateAnalysis

Generates a chart for hspens in time according to a certain interval in the parameter e.g. : a chart for several salinity intervals

speciesGeographicEvolutionAnalysis(String[], String[], float) - Method in class org.gcube.dataanalysis.ecoengine.evaluation.bioclimate.BioClimateAnalysis

speciesGeographicEvolutionAnalysis2(String[], String[], float) - Method in class org.gcube.dataanalysis.ecoengine.evaluation.bioclimate.BioClimateAnalysis

Generates a chart for hspec probability > thr in each Fao Area and LME

speciesList - Variable in class org.gcube.dataanalysis.ecoengine.connectors.RemoteHspecInputObject

SpEnv_landdist - Class in org.gcube.dataanalysis.ecoengine.models.cores.aquamaps

SpEnv_landdist() - Constructor for class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.SpEnv_landdist

SpEnv_primprod - Class in org.gcube.dataanalysis.ecoengine.models.cores.aquamaps

SpEnv_primprod() - Constructor for class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.SpEnv_primprod

SpEnv_salinity - Class in org.gcube.dataanalysis.ecoengine.models.cores.aquamaps

SpEnv_salinity() - Constructor for class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.SpEnv_salinity

SpEnv_seaice - Class in org.gcube.dataanalysis.ecoengine.models.cores.aquamaps

SpEnv_seaice() - Constructor for class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.SpEnv_seaice

SpEnv_temp - Class in org.gcube.dataanalysis.ecoengine.models.cores.aquamaps

SpEnv_temp() - Constructor for class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.SpEnv_temp

SpiderWebDemo1 - Class in org.gcube.contentmanagement.graphtools.plotting.demo

A simple demonstration application showing how to create a pie chart using data from a DefaultPieDataset.

SpiderWebDemo1(String) - Constructor for class org.gcube.contentmanagement.graphtools.plotting.demo.SpiderWebDemo1

Default constructor.

SpiderWebPlot - Class in org.gcube.contentmanagement.graphtools.plotting.demo

A plot that displays data from a CategoryDataset in the form of a "spider web".

SpiderWebPlot() - Constructor for class org.gcube.contentmanagement.graphtools.plotting.demo.SpiderWebPlot

Creates a default plot with no dataset.

SpiderWebPlot(CategoryDataset) - Constructor for class org.gcube.contentmanagement.graphtools.plotting.demo.SpiderWebPlot

Creates a new spider web plot with the given dataset, with each row representing a series.

SpiderWebPlot(CategoryDataset, TableOrder) - Constructor for class org.gcube.contentmanagement.graphtools.plotting.demo.SpiderWebPlot

Creates a new spider web plot with the given dataset.

SPIKE - Static variable in class org.gcube.contentmanagement.graphtools.data.conversions.GraphConverter2D

splitCenter(Random, Instance, double, Instances) - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Split centers in their region.

splitCenters(Random, Instances, Instances) - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Split centers in their region.

sqlDateFormat - Static variable in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsMerger

standardize(double[][]) - Method in class org.gcube.dataanalysis.ecoengine.utils.Operations

standardize(double[][], double[], double[]) - Method in class org.gcube.dataanalysis.ecoengine.utils.Operations

StarGraphExtraction - Class in org.gcube.contentmanagement.lexicalmatcher.analysis.run

StarGraphExtraction() - Constructor for class org.gcube.contentmanagement.lexicalmatcher.analysis.run.StarGraphExtraction

start() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.graph.GraphDisplayer

StatisticalManagerClass - Static variable in class org.gcube.dataanalysis.ecoengine.configuration.AlgorithmConfiguration

StatisticalManagerService - Static variable in class org.gcube.dataanalysis.ecoengine.configuration.AlgorithmConfiguration

StatisticalType - Class in org.gcube.dataanalysis.ecoengine.datatypes

StatisticalType(String, String, String, boolean) - Constructor for class org.gcube.dataanalysis.ecoengine.datatypes.StatisticalType

StatisticalType(String, String, String) - Constructor for class org.gcube.dataanalysis.ecoengine.datatypes.StatisticalType

StatisticalType(String, String) - Constructor for class org.gcube.dataanalysis.ecoengine.datatypes.StatisticalType

StatisticalType(String, String, boolean) - Constructor for class org.gcube.dataanalysis.ecoengine.datatypes.StatisticalType

StatisticalTypeList<C extends StatisticalType> - Class in org.gcube.dataanalysis.ecoengine.datatypes

StatisticalTypeList(String, String, boolean) - Constructor for class org.gcube.dataanalysis.ecoengine.datatypes.StatisticalTypeList

StatisticsGenerator - Class in org.gcube.contentmanagement.graphtools.core

StatisticsGenerator() - Constructor for class org.gcube.contentmanagement.graphtools.core.StatisticsGenerator

status - Variable in class org.gcube.dataanalysis.ecoengine.clustering.DBScan

status - Variable in class org.gcube.dataanalysis.ecoengine.connectors.RemoteHspecOutputObject

status - Variable in class org.gcube.dataanalysis.ecoengine.evaluation.bioclimate.InterpolateTables

status - Variable in class org.gcube.dataanalysis.ecoengine.interfaces.DataAnalysis

status - Variable in class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.Neural_Network

status - Variable in class org.gcube.dataanalysis.ecoengine.models.ModelAquamapsNN

status - Variable in class org.gcube.dataanalysis.ecoengine.processing.LocalSimpleSplitGenerator

status - Variable in class org.gcube.dataanalysis.ecoengine.spatialdistributions.BayesianDistribution

status - Variable in class org.gcube.dataanalysis.ecoengine.transducers.BioClimateHSPECTransducer

status - Variable in class org.gcube.dataanalysis.ecoengine.transducers.InterpolationTransducer

status - Variable in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsMerger

status - Variable in class org.gcube.dataanalysis.ecoengine.transducers.QueryExecutor

stop() - Method in class org.gcube.dataanalysis.ecoengine.interfaces.ActorNode

stop() - Method in interface org.gcube.dataanalysis.ecoengine.interfaces.Model

stop() - Method in class org.gcube.dataanalysis.ecoengine.interfaces.SpatialProbabilityDistributionNode

stop() - Method in class org.gcube.dataanalysis.ecoengine.models.ModelAquamapsNN

stop() - Method in class org.gcube.dataanalysis.ecoengine.models.ModelAquamapsNNNS

stop() - Method in class org.gcube.dataanalysis.ecoengine.models.ModelHSPEN

stopInterrupt - Variable in class org.gcube.dataanalysis.ecoengine.processing.LocalSimpleSplitGenerator

stopIteration(int, int) - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Checks if iterationCount has to be checked and if yes (this means max is > 0) compares it with max.

stopKMeansIteration(int, int) - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Controls that counter does not exceed max iteration value.

storeDistribution(Map<Object, Map<Object, Float>>) - Method in interface org.gcube.dataanalysis.ecoengine.interfaces.SpatialProbabilityDistributionGeneric

storeDistribution(Map<Object, Map<Object, Float>>) - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.BayesianDistribution

storeDistribution(Map<Object, Map<Object, Float>>) - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.DummyAlgorithm

storeDistribution(Map<Object, Map<Object, Float>>) - Method in class org.gcube.dataanalysis.ecoengine.spatialdistributions.TestAlgorithm

stringMap2StatisticalMap(HashMap<String, String>) - Static method in class org.gcube.dataanalysis.ecoengine.datatypes.PrimitiveType

submitJob(RemoteHspecInputObject) - Method in class org.gcube.dataanalysis.ecoengine.connectors.RemoteGenerationManager

substColumn(double[], int, double[][]) - Static method in class org.gcube.dataanalysis.ecoengine.utils.Transformations

sumElementsStatement(String, String) - Static method in class org.gcube.dataanalysis.ecoengine.utils.DatabaseUtils

sumVector(double[]) - Static method in class org.gcube.dataanalysis.ecoengine.utils.Operations

Synapse - Class in org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.neurosolutions

Synapse(Neuron, Neuron, Randomizer) - Constructor for class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.neurosolutions.Synapse

synapsesin - Variable in class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.neurosolutions.Neuron

synapsesout - Variable in class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.neurosolutions.Neuron

T

TableDescr - Class in org.gcube.portlets.user.timeseries.charts.support.tablemodel

TableDescr(String) - Constructor for class org.gcube.portlets.user.timeseries.charts.support.tablemodel.TableDescr

TableDescr(String, String) - Constructor for class org.gcube.portlets.user.timeseries.charts.support.tablemodel.TableDescr

tableName - Variable in class org.gcube.dataanalysis.ecoengine.connectors.RemoteHspecInputObject.Table

tableName - Variable in class org.gcube.dataanalysis.ecoengine.datatypes.OutputTable

tableNameF - Static variable in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsMerger

TablesComparison - Class in org.gcube.dataanalysis.ecoengine.test

checks if two tables are equal checks numbers at the second decimal position

TablesComparison(AlgorithmConfiguration) - Constructor for class org.gcube.dataanalysis.ecoengine.test.TablesComparison

TablesDiscrepanciesCalculator - Class in org.gcube.dataanalysis.ecoengine.utils

checks if two tables are equal checks numbers at the second decimal position

TablesDiscrepanciesCalculator(AlgorithmConfiguration) - Constructor for class org.gcube.dataanalysis.ecoengine.utils.TablesDiscrepanciesCalculator

TablesList - Class in org.gcube.dataanalysis.ecoengine.datatypes

TablesList(List<TableTemplates>, String, String, boolean) - Constructor for class org.gcube.dataanalysis.ecoengine.datatypes.TablesList

TableTemplates - Enum in org.gcube.dataanalysis.ecoengine.datatypes.enumtypes

takeChunkOfDestElements(String, String, String, SessionFactory, String) - Method in class org.gcube.dataanalysis.ecoengine.utils.HspecDiscrepanciesCalculator

takeChunkOfElements(String, String, String, int, int, SessionFactory) - Method in class org.gcube.dataanalysis.ecoengine.test.TablesComparison

takeChunkOfElements(String, String, String, int, int, SessionFactory) - Method in class org.gcube.dataanalysis.ecoengine.utils.HspecDiscrepanciesCalculator

takeChunkOfElements(String, String, String, int, int, SessionFactory) - Method in class org.gcube.dataanalysis.ecoengine.utils.TablesDiscrepanciesCalculator

takeChunks(int, int) - Static method in class org.gcube.dataanalysis.ecoengine.utils.Operations

takeFullRanges() - Method in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsDuplicatesDeleter

takeFullRanges() - Method in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsMerger

takeRange(int, int, int, int) - Method in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsDuplicatesDeleter

takeRange(int, int, int, int) - Method in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsMerger

target - Variable in class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.neurosolutions.Pattern

targetunit - Variable in class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.neurosolutions.Synapse

templateNames - Variable in class org.gcube.dataanalysis.ecoengine.datatypes.InputTable

templateNames - Variable in class org.gcube.dataanalysis.ecoengine.datatypes.TablesList

temporaryDirectory - Variable in class org.gcube.dataanalysis.ecoengine.evaluation.bioclimate.InterpolateTables

TestAlgorithm - Class in org.gcube.dataanalysis.ecoengine.spatialdistributions

TestAlgorithm() - Constructor for class org.gcube.dataanalysis.ecoengine.spatialdistributions.TestAlgorithm

TestBayesianModels - Class in org.gcube.dataanalysis.ecoengine.test.checks

TestBayesianModels() - Constructor for class org.gcube.dataanalysis.ecoengine.test.checks.TestBayesianModels

TestBayesianModelsDBTest - Class in org.gcube.dataanalysis.ecoengine.test.checks

TestBayesianModelsDBTest() - Constructor for class org.gcube.dataanalysis.ecoengine.test.checks.TestBayesianModelsDBTest

TestBioClimateAnalysis - Class in org.gcube.dataanalysis.ecoengine.test.checks

TestBioClimateAnalysis() - Constructor for class org.gcube.dataanalysis.ecoengine.test.checks.TestBioClimateAnalysis

TestClusterer - Class in org.gcube.dataanalysis.ecoengine.test.checks

TestClusterer() - Constructor for class org.gcube.dataanalysis.ecoengine.test.checks.TestClusterer

TestClusterer.ThreadCalculator - Class in org.gcube.dataanalysis.ecoengine.test.checks

TestClusterer.ThreadCalculator(ComputationalAgent) - Constructor for class org.gcube.dataanalysis.ecoengine.test.checks.TestClusterer.ThreadCalculator

testConnections - Class in org.gcube.contentmanagement.graphtools.tests

testConnections() - Constructor for class org.gcube.contentmanagement.graphtools.tests.testConnections

TestConverters - Class in org.gcube.contentmanagement.graphtools.tests.old

TestConverters() - Constructor for class org.gcube.contentmanagement.graphtools.tests.old.TestConverters

TestDBExtractor - Class in org.gcube.contentmanagement.graphtools.tests.old

TestDBExtractor() - Constructor for class org.gcube.contentmanagement.graphtools.tests.old.TestDBExtractor

TestDBNEXTEvaluators - Class in org.gcube.dataanalysis.ecoengine.test.checks

TestDBNEXTEvaluators() - Constructor for class org.gcube.dataanalysis.ecoengine.test.checks.TestDBNEXTEvaluators

testDrawWithNullInfo() - Static method in class org.gcube.contentmanagement.graphtools.plotting.demo.TestWeb

TestErrorRatio(PatternSet) - Method in class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.neurosolutions.NeuralNet

TestEvaluation - Class in org.gcube.dataanalysis.ecoengine.test.checks

TestEvaluation() - Constructor for class org.gcube.dataanalysis.ecoengine.test.checks.TestEvaluation

TestEvaluation.ThreadCalculator - Class in org.gcube.dataanalysis.ecoengine.test.checks

TestEvaluation.ThreadCalculator(ComputationalAgent, AlgorithmConfiguration) - Constructor for class org.gcube.dataanalysis.ecoengine.test.checks.TestEvaluation.ThreadCalculator

TestExternalCfgProduction - Class in org.gcube.contentmanagement.lexicalmatcher.analysis.test.old

TestExternalCfgProduction() - Constructor for class org.gcube.contentmanagement.lexicalmatcher.analysis.test.old.TestExternalCfgProduction

TestExternalCfgProduction - Class in org.gcube.contentmanagement.lexicalmatcher.analysis.test

TestExternalCfgProduction() - Constructor for class org.gcube.contentmanagement.lexicalmatcher.analysis.test.TestExternalCfgProduction

TestHSPECBioClimateAnalysisDev - Class in org.gcube.dataanalysis.ecoengine.test.checks

TestHSPECBioClimateAnalysisDev() - Constructor for class org.gcube.dataanalysis.ecoengine.test.checks.TestHSPECBioClimateAnalysisDev

TestHSPECBioClimateAnalysisProd - Class in org.gcube.dataanalysis.ecoengine.test.checks

TestHSPECBioClimateAnalysisProd() - Constructor for class org.gcube.dataanalysis.ecoengine.test.checks.TestHSPECBioClimateAnalysisProd

TestMahoutComparison - Class in org.gcube.dataanalysis.ecoengine.test.checks

TestMahoutComparison() - Constructor for class org.gcube.dataanalysis.ecoengine.test.checks.TestMahoutComparison

TestNN - Class in org.gcube.dataanalysis.ecoengine.test.neuralnetwork

TestNN() - Constructor for class org.gcube.dataanalysis.ecoengine.test.neuralnetwork.TestNN

TestsHSPENTraining - Class in org.gcube.dataanalysis.ecoengine.test.checks

TestsHSPENTraining() - Constructor for class org.gcube.dataanalysis.ecoengine.test.checks.TestsHSPENTraining

TestsHSPENTraining.ThreadCalculator - Class in org.gcube.dataanalysis.ecoengine.test.checks

TestsHSPENTraining.ThreadCalculator(ComputationalAgent, AlgorithmConfiguration) - Constructor for class org.gcube.dataanalysis.ecoengine.test.checks.TestsHSPENTraining.ThreadCalculator

TestSingleExternalCfgProduction - Class in org.gcube.contentmanagement.lexicalmatcher.analysis.test.old

TestSingleExternalCfgProduction() - Constructor for class org.gcube.contentmanagement.lexicalmatcher.analysis.test.old.TestSingleExternalCfgProduction

TestSingleExternalCfgProduction - Class in org.gcube.contentmanagement.lexicalmatcher.analysis.test

TestSingleExternalCfgProduction() - Constructor for class org.gcube.contentmanagement.lexicalmatcher.analysis.test.TestSingleExternalCfgProduction

TestsMetaInfo - Class in org.gcube.dataanalysis.ecoengine.test

TestsMetaInfo() - Constructor for class org.gcube.dataanalysis.ecoengine.test.TestsMetaInfo

TestTrans - Class in org.gcube.dataanalysis.ecoengine.transducers

TestTrans() - Constructor for class org.gcube.dataanalysis.ecoengine.transducers.TestTrans

TestWeb - Class in org.gcube.contentmanagement.graphtools.plotting.demo

TestWeb() - Constructor for class org.gcube.contentmanagement.graphtools.plotting.demo.TestWeb

TextTest - Class in org.gcube.contentmanagement.graphtools.tests.old

TextTest() - Constructor for class org.gcube.contentmanagement.graphtools.tests.old.TextTest

TFD(int) - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Tests on debug status.

threadActivity - Variable in class org.gcube.dataanalysis.ecoengine.processing.LocalSimpleSplitGenerator

threshold - Variable in class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.neurosolutions.Neuron

throughput - Variable in class org.gcube.dataanalysis.ecoengine.connectors.RemoteHspecOutputObject.Metric

TimeSeriesChartDemo1 - Class in org.gcube.contentmanagement.graphtools.plotting.demo

An example of a time series chart.

TimeSeriesChartDemo1(String) - Constructor for class org.gcube.contentmanagement.graphtools.plotting.demo.TimeSeriesChartDemo1

A demonstration application showing how to create a simple time series chart.

TimeSeriesChunk - Class in org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.chunks

TimeSeriesChunk(String, String, String, BigInteger, int, LexicalEngineConfiguration, Engine) - Constructor for class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.chunks.TimeSeriesChunk

TimeSeriesChunk(String, String, BigInteger, int, LexicalEngineConfiguration, Engine) - Constructor for class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.chunks.TimeSeriesChunk

TimeSeriesChunkSet - Class in org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.chunks

TimeSeriesChunkSet(int, int, String, String, LexicalEngineConfiguration, Engine) - Constructor for class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.chunks.TimeSeriesChunkSet

TimeSeriesChunksToTake - Variable in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.LexicalEngineConfiguration

TimeSeriesGraph - Class in org.gcube.contentmanagement.graphtools.plotting.graphs

TimeSeriesGraph(String) - Constructor for class org.gcube.contentmanagement.graphtools.plotting.graphs.TimeSeriesGraph

timestamp - Variable in class org.gcube.dataanalysis.ecoengine.connectors.livemonitor.ResourceLoad

timestamp - Variable in class org.gcube.dataanalysis.ecoengine.connectors.RemoteHspecOutputObject.Metric

toBufferedImage(Image) - Static method in class org.gcube.contentmanagement.graphtools.data.conversions.ImageTools

toEnvelope(EnvelopeName) - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.AquamapsEnvelope

toImage(BufferedImage) - Static method in class org.gcube.contentmanagement.graphtools.data.conversions.ImageTools

toJSon(Object) - Static method in class org.gcube.contentmanagement.graphtools.utils.HttpRequest

toObjectArray() - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.Hspen

toObjectArray() - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.OccurrencePoint

toString() - Method in class org.gcube.contentmanagement.graphtools.abstracts.SamplesTable

toString(String) - Method in class org.gcube.contentmanagement.graphtools.core.filters.Filter

toString() - Method in class org.gcube.contentmanagement.graphtools.core.filters.Filter

toString() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.Category

toString() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.Entry

toString() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.RelationEdge

toString() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.SingleResult

toString() - Method in interface org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.interfaces.Reference

toString() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.graph.CustomWeightedEdge

toString() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.graph.CustomWeightedVertex

toString() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.graph.RelationEdge

toString() - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Return a string describing this clusterer.

toString() - Method in class org.gcube.dataanalysis.ecoengine.connectors.livemonitor.ResourceLoad

toString() - Method in class org.gcube.dataanalysis.ecoengine.connectors.RemoteHspecOutputObject.Metric

toString() - Method in class org.gcube.dataanalysis.ecoengine.connectors.RemoteHspecOutputObject

toString() - Method in class org.gcube.dataanalysis.ecoengine.datatypes.StatisticalType

toString() - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.SpEnv_landdist

toString() - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.SpEnv_primprod

toString() - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.SpEnv_salinity

toString() - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.SpEnv_seaice

toString() - Method in class org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.SpEnv_temp

toString() - Method in class org.gcube.dataanalysis.ecoengine.utils.Tuple

toString() - Method in class org.gcube.portlets.user.timeseries.charts.support.types.Point

toString() - Method in class org.gcube.portlets.user.timeseries.charts.support.types.ValueEntry

totalCatElements - Variable in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.DBObjectTranslator

totalEntries - Variable in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.DBObjectTranslator

totalRelationElements - Variable in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.DBObjectTranslator

train(AlgorithmConfiguration, Model) - Method in interface org.gcube.dataanalysis.ecoengine.interfaces.Model

train(double[][], double[][]) - Method in class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.Neural_Network

train(AlgorithmConfiguration, Model) - Method in class org.gcube.dataanalysis.ecoengine.models.FeedForwardNN

train(AlgorithmConfiguration, Model) - Method in class org.gcube.dataanalysis.ecoengine.models.ModelAquamapsNN

train(AlgorithmConfiguration, Model) - Method in class org.gcube.dataanalysis.ecoengine.models.ModelAquamapsNNNS

train(AlgorithmConfiguration, Model) - Method in class org.gcube.dataanalysis.ecoengine.models.ModelHSPEN

train(AlgorithmConfiguration, Model) - Method in class org.gcube.dataanalysis.ecoengine.models.testing.FeedForwardNNFile

train(AlgorithmConfiguration) - Static method in class org.gcube.dataanalysis.ecoengine.user.ModelerT

trainingColumn - Variable in class org.gcube.dataanalysis.ecoengine.models.FeedForwardNN

trainingColumn - Variable in class org.gcube.dataanalysis.ecoengine.models.testing.FeedForwardNNFile

TrainingDataSet - Static variable in class org.gcube.dataanalysis.ecoengine.models.FeedForwardNN

trainingDataSet - Variable in class org.gcube.dataanalysis.ecoengine.models.FeedForwardNN

TrainingDataSet - Static variable in class org.gcube.dataanalysis.ecoengine.models.testing.FeedForwardNNFile

trainingDataSet - Variable in class org.gcube.dataanalysis.ecoengine.models.testing.FeedForwardNNFile

TrainingDataSetColumns - Static variable in class org.gcube.dataanalysis.ecoengine.models.FeedForwardNN

trainingDataSetColumns - Variable in class org.gcube.dataanalysis.ecoengine.models.FeedForwardNN

TrainingDataSetColumns - Static variable in class org.gcube.dataanalysis.ecoengine.models.testing.FeedForwardNNFile

trainingDataSetColumns - Variable in class org.gcube.dataanalysis.ecoengine.models.testing.FeedForwardNNFile

TrainingDataSetTargetColumn - Static variable in class org.gcube.dataanalysis.ecoengine.models.FeedForwardNN

TrainingDataSetTargetColumn - Static variable in class org.gcube.dataanalysis.ecoengine.models.testing.FeedForwardNNFile

TrainingSetsGenerator - Class in org.gcube.dataanalysis.ecoengine.utils

TrainingSetsGenerator() - Constructor for class org.gcube.dataanalysis.ecoengine.utils.TrainingSetsGenerator

trainNativeNeuralNetworks() - Static method in class org.gcube.dataanalysis.ecoengine.test.experiments.latimeria.ExperimentsForLatimeria

trainNeuralNetworks() - Static method in class org.gcube.dataanalysis.ecoengine.test.experiments.latimeria.ExperimentsForLatimeria

TrainProduceTestMap - Class in org.gcube.dataanalysis.ecoengine.test.trainers

TrainProduceTestMap() - Constructor for class org.gcube.dataanalysis.ecoengine.test.trainers.TrainProduceTestMap

trainSuitableNeuralNetworks() - Static method in class org.gcube.dataanalysis.ecoengine.test.experiments.latimeria.ExperimentsForLatimeria

Transducerer - Interface in org.gcube.dataanalysis.ecoengine.interfaces

transducererFile - Static variable in class org.gcube.dataanalysis.ecoengine.configuration.AlgorithmConfiguration

TransducerersFactory - Class in org.gcube.dataanalysis.ecoengine.processing.factories

TransducerersFactory() - Constructor for class org.gcube.dataanalysis.ecoengine.processing.factories.TransducerersFactory

TransectLineGraph - Class in org.gcube.contentmanagement.graphtools.plotting.graphs

TransectLineGraph(String) - Constructor for class org.gcube.contentmanagement.graphtools.plotting.graphs.TransectLineGraph

transform2Graph(DBObjectTranslator) - Static method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.TSObjectTransformer

transform2List(DBObjectTranslator, LexicalEngineConfiguration) - Static method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.TSObjectTransformer

transform2List(DBObjectTranslator, LexicalEngineConfiguration, String) - Static method in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.TSObjectTransformer

Transformations - Class in org.gcube.dataanalysis.ecoengine.utils

Transformations() - Constructor for class org.gcube.dataanalysis.ecoengine.utils.Transformations

transformTable(SamplesTable) - Static method in class org.gcube.contentmanagement.graphtools.data.conversions.GraphConverter2D

transformTypeFromDB(String) - Static method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.DataTypeRecognizer

traspose(double[][]) - Static method in class org.gcube.dataanalysis.ecoengine.utils.Transformations

TreeExtractor - Class in org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.graph

TreeExtractor() - Constructor for class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.graph.TreeExtractor

TSObjectTransformer - Class in org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data

TSObjectTransformer() - Constructor for class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.data.TSObjectTransformer

Tuple<A> - Class in org.gcube.dataanalysis.ecoengine.utils

Tuple(A...) - Constructor for class org.gcube.dataanalysis.ecoengine.utils.Tuple

type - Variable in class org.gcube.dataanalysis.ecoengine.datatypes.PrimitiveType

type - Variable in class org.gcube.dataanalysis.ecoengine.spatialdistributions.AquamapsSuitable

U

Uniform(double, double) - Method in class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.neurosolutions.Randomizer

uniformDivide(double, double, double[]) - Static method in class org.gcube.dataanalysis.ecoengine.utils.Operations

update(String, String, String, String, String) - Static method in class org.gcube.dataanalysis.ecoengine.utils.DatabaseUtils

updateColumn(String, String, String, List<Object>) - Static method in class org.gcube.dataanalysis.ecoengine.utils.DatabaseUtils

UpdateOutput() - Method in class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.neurosolutions.Neuron

updateTableColumnFromOther(String, String, String, String, String, String) - Static method in class org.gcube.dataanalysis.ecoengine.utils.DatabaseUtils

useDB() - Method in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.EngineConfiguration

useKDTreeTipText() - Method in class org.gcube.dataanalysis.ecoengine.clustering.XMeans

Returns the tip text for this property.

userName - Variable in class org.gcube.dataanalysis.ecoengine.connectors.RemoteHspecInputObject

UserName - Static variable in class org.gcube.dataanalysis.ecoengine.models.FeedForwardNN

UserName - Static variable in class org.gcube.dataanalysis.ecoengine.models.testing.FeedForwardNNFile

UserName - Static variable in class org.gcube.dataanalysis.ecoengine.spatialdistributions.BayesianDistribution

userName - Variable in class org.gcube.dataanalysis.ecoengine.spatialdistributions.BayesianDistribution

userperspectiveFile - Static variable in class org.gcube.dataanalysis.ecoengine.configuration.AlgorithmConfiguration

useSimpleDistance - Variable in class org.gcube.contentmanagement.lexicalmatcher.analysis.core.LexicalEngineConfiguration

V

validate(boolean, T) - Method in class org.gcube.portlets.user.timeseries.charts.support.assertions.Assertion

Makes an assertion and if the expression evaluation fails, throws an exception of type T.

value - Variable in class org.gcube.dataanalysis.ecoengine.connectors.livemonitor.ResourceLoad

value - Variable in class org.gcube.dataanalysis.ecoengine.connectors.livemonitor.SingleResource

ValueEntry<T extends Number> - Class in org.gcube.portlets.user.timeseries.charts.support.types

Each value entry in a graph is identified by its numerical value and possibly its label.

ValueEntry(T) - Constructor for class org.gcube.portlets.user.timeseries.charts.support.types.ValueEntry

ValueEntry(String, T) - Constructor for class org.gcube.portlets.user.timeseries.charts.support.types.ValueEntry

valueOf(String) - Static method in enum org.gcube.dataanalysis.ecoengine.configuration.ALG_PROPS

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.gcube.dataanalysis.ecoengine.configuration.INFRASTRUCTURE

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.gcube.dataanalysis.ecoengine.datatypes.enumtypes.DatabaseParameters

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.gcube.dataanalysis.ecoengine.datatypes.enumtypes.PrimitiveTypes

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.gcube.dataanalysis.ecoengine.datatypes.enumtypes.ServiceParameters

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.gcube.dataanalysis.ecoengine.datatypes.enumtypes.TableTemplates

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.gcube.dataanalysis.ecoengine.evaluation.bioclimate.InterpolateTables.INTERPOLATIONFUNCTIONS

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.EnvelopeModel

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.EnvelopeName

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.Neural_Network.ACTIVATIONFUNCTION

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsInSeaOnEarth.inseasonearth

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum org.gcube.portlets.user.timeseries.charts.support.tablemodel.FieldType

Returns the enum constant of this type with the specified name.

values() - Static method in enum org.gcube.dataanalysis.ecoengine.configuration.ALG_PROPS

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.gcube.dataanalysis.ecoengine.configuration.INFRASTRUCTURE

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.gcube.dataanalysis.ecoengine.datatypes.enumtypes.DatabaseParameters

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.gcube.dataanalysis.ecoengine.datatypes.enumtypes.PrimitiveTypes

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.gcube.dataanalysis.ecoengine.datatypes.enumtypes.ServiceParameters

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.gcube.dataanalysis.ecoengine.datatypes.enumtypes.TableTemplates

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.gcube.dataanalysis.ecoengine.evaluation.bioclimate.InterpolateTables.INTERPOLATIONFUNCTIONS

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.EnvelopeModel

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.gcube.dataanalysis.ecoengine.models.cores.aquamaps.EnvelopeName

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.Neural_Network.ACTIVATIONFUNCTION

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsInSeaOnEarth.inseasonearth

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum org.gcube.portlets.user.timeseries.charts.support.tablemodel.FieldType

Returns an array containing the constants of this enum type, in the order they are declared.

variances - Variable in class org.gcube.dataanalysis.ecoengine.utils.Operations

vector2String(double[]) - Static method in class org.gcube.dataanalysis.ecoengine.utils.Transformations

vectorialAbsoluteDifference(double[], double[]) - Static method in class org.gcube.dataanalysis.ecoengine.utils.Operations

vectorialDifference(double[], double[]) - Static method in class org.gcube.dataanalysis.ecoengine.utils.Operations

visualizeResults(HashMap<String, String>) - Static method in class org.gcube.dataanalysis.ecoengine.evaluation.DistributionQualityAnalysis

visualizeResults(HashMap<String, String>) - Static method in class org.gcube.dataanalysis.ecoengine.evaluation.HabitatRepresentativeness

visualizeResults(HashMap<String, String>) - Static method in class org.gcube.dataanalysis.ecoengine.interfaces.DataAnalysis

visualizes the results of the analysis

W

W - Variable in class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.Neuron

weight - Variable in class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.neurosolutions.Synapse

width() - Method in class org.gcube.contentmanagement.graphtools.data.BigSparseTable

WIDTH - Static variable in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.graph.GraphDisplayer

WIDTHBOX - Static variable in class org.gcube.contentmanagement.lexicalmatcher.analysis.guesser.treeStructure.graph.GraphDisplayer

writeout(double, double) - Method in class org.gcube.dataanalysis.ecoengine.models.cores.neuralnetworks.Neural_Network

X

x - Variable in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsMerger.OccurrenceRecord

x$ - Variable in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsMerger.OccurrenceRecord

XMeans - Class in org.gcube.dataanalysis.ecoengine.clustering

Cluster data using the X-means algorithm.

XMeans() - Constructor for class org.gcube.dataanalysis.ecoengine.clustering.XMeans

the default constructor.

XMeansWrapper - Class in org.gcube.dataanalysis.ecoengine.clustering

XMeansWrapper() - Constructor for class org.gcube.dataanalysis.ecoengine.clustering.XMeansWrapper

XMeansWrapper.CSV2Arff - Class in org.gcube.dataanalysis.ecoengine.clustering

XMeansWrapper.CSV2Arff() - Constructor for class org.gcube.dataanalysis.ecoengine.clustering.XMeansWrapper.CSV2Arff

Y

y - Variable in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsMerger.OccurrenceRecord

y$ - Variable in class org.gcube.dataanalysis.ecoengine.transducers.OccurrencePointsMerger.OccurrenceRecord

YEAR - Static variable in class org.gcube.contentmanagement.graphtools.utils.DateGuesser

$ A B C D E F G H I J K L M N O P Q R S T U V W X Y