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ecological-engine
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git-svn-id: https://svn.d4science.research-infrastructures.eu/gcube/trunk/data-analysis/EcologicalEngine@61414 82a268e6-3cf1-43bd-a215-b396298e98cf

This commit is contained in:
Gianpaolo Coro 2012-11-23 11:11:39 +00:00
parent 061e0b895a
commit 1e065fbec7
884 changed files with 3132 additions and 1749 deletions
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4
src/main/java/org/gcube/dataanalysis/ecoengine/clustering/DBScan.java
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@ -164,6 +164,7 @@ public class DBScan implements Clusterer{
return INFRASTRUCTURE.LOCAL; return INFRASTRUCTURE.LOCAL;
} }
long t00;
@Override @Override
public void init() throws Exception { public void init() throws Exception {
status = 0; status = 0;
@ -220,6 +221,7 @@ public class DBScan implements Clusterer{
} }
protected void getSamples() throws Exception{ protected void getSamples() throws Exception{
t00=System.currentTimeMillis();
// System.out.println("->"+DatabaseUtils.getColumnsElementsStatement(OccurrencePointsTable, FeaturesColumnNames, "")); // System.out.println("->"+DatabaseUtils.getColumnsElementsStatement(OccurrencePointsTable, FeaturesColumnNames, ""));
FeaturesColumnNames=FeaturesColumnNames.replace(AlgorithmConfiguration.listSeparator, ","); FeaturesColumnNames=FeaturesColumnNames.replace(AlgorithmConfiguration.listSeparator, ",");
List<Object> samples = DatabaseFactory.executeSQLQuery(DatabaseUtils.getColumnsElementsStatement(OccurrencePointsTable, FeaturesColumnNames, ""), dbHibConnection); List<Object> samples = DatabaseFactory.executeSQLQuery(DatabaseUtils.getColumnsElementsStatement(OccurrencePointsTable, FeaturesColumnNames, ""), dbHibConnection);
@ -281,7 +283,7 @@ public class DBScan implements Clusterer{
long ti= System.currentTimeMillis(); long ti= System.currentTimeMillis();
IOContainer output = clusterer.apply(innerInput); IOContainer output = clusterer.apply(innerInput);
AnalysisLogger.getLogger().debug("DBScan: ...ELAPSED CLUSTERING TIME: "+(System.currentTimeMillis()-ti)); AnalysisLogger.getLogger().debug("DBScan: ...ELAPSED CLUSTERING TIME: "+(System.currentTimeMillis()-ti));
AnalysisLogger.getLogger().debug("DBScan: ...Clustering Finished"); AnalysisLogger.getLogger().debug("DBScan: ...Clustering Finished in "+(System.currentTimeMillis()-t00));
status = 70f; status = 70f;
IOObject[] outputvector = output.getIOObjects(); IOObject[] outputvector = output.getIOObjects();

12
src/main/java/org/gcube/dataanalysis/ecoengine/clustering/KMeans.java
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@ -74,7 +74,7 @@ public class KMeans extends DBScan{
@Override @Override
public void compute() throws Exception { public void compute() throws Exception {
try{
if ((config==null)||kk==null||maxRuns==null||maxOptimizations==null){ if ((config==null)||kk==null||maxRuns==null||maxOptimizations==null){
throw new Exception("KMeans: Error incomplete parameters"); throw new Exception("KMeans: Error incomplete parameters");
} }
@ -103,9 +103,13 @@ public class KMeans extends DBScan{
IOObject[] outputvector = output.getIOObjects(); IOObject[] outputvector = output.getIOObjects();
BuildClusterTable(outputvector); BuildClusterTable(outputvector);
}catch(Exception e){
shutdown(); throw e;
status = 100f; }
finally{
shutdown();
status = 100f;
}
} }

12
src/main/java/org/gcube/dataanalysis/ecoengine/clustering/XMeansWrapper.java
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@ -164,7 +164,7 @@ public class XMeansWrapper extends DBScan {
@Override @Override
public void compute() throws Exception { public void compute() throws Exception {
try{
if ((config == null) || maxIterations == null || minClusters == null || maxClusters == null) { if ((config == null) || maxIterations == null || minClusters == null || maxClusters == null) {
throw new Exception("XMeans: Error incomplete parameters"); throw new Exception("XMeans: Error incomplete parameters");
} }
@ -228,9 +228,13 @@ public class XMeansWrapper extends DBScan {
} else } else
AnalysisLogger.getLogger().debug("XMeans: Warning - Empty Training Set"); AnalysisLogger.getLogger().debug("XMeans: Warning - Empty Training Set");
}catch(Exception e){
shutdown(); throw e;
status = 100f; }
finally{
shutdown();
status = 100f;
}
} }
protected void BuildClusterTable(int[] clusteringAssignments, int[] counters) throws Exception { protected void BuildClusterTable(int[] clusteringAssignments, int[] counters) throws Exception {

4
src/main/java/org/gcube/dataanalysis/ecoengine/evaluation/bioclimate/BioClimateAnalysis.java
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@ -337,7 +337,9 @@ public class BioClimateAnalysis {
throw e; throw e;
} finally { } finally {
status = 100f; status = 100f;
try{
referencedbConnection.close(); referencedbConnection.close();
}catch(Exception e){}
} }
} }
@ -643,7 +645,9 @@ public class BioClimateAnalysis {
throw e; throw e;
} finally { } finally {
status = 100f; status = 100f;
try{
referencedbConnection.close(); referencedbConnection.close();
}catch(Exception e2){}
} }
} }

2
src/main/java/org/gcube/dataanalysis/ecoengine/evaluation/bioclimate/InterpolateTables.java
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@ -171,7 +171,9 @@ public class InterpolateTables {
} finally { } finally {
// close connections // close connections
if (referencedbConnection!=null) if (referencedbConnection!=null)
try{
referencedbConnection.close(); referencedbConnection.close();
}catch(Exception e){}
status = 100f; status = 100f;
} }
} }

7
src/main/java/org/gcube/dataanalysis/ecoengine/interfaces/DataAnalysis.java
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@ -40,12 +40,13 @@ public abstract class DataAnalysis implements Evaluator{
out = new HashMap<String, String>(); out = new HashMap<String, String>();
try{ try{
out = analyze(); out = analyze();
shutdown();
}catch(Exception e){ }catch(Exception e){
e.printStackTrace(); e.printStackTrace();
throw e; throw e;
} }
finally{ finally{
shutdown();
status = 100; status = 100;
} }
@ -118,8 +119,10 @@ public abstract class DataAnalysis implements Evaluator{
public void shutdown() { public void shutdown() {
try { try {
connection.close(); AnalysisLogger.getLogger().debug("Closing DB connections");
connection.close();
} catch (Exception e) { } catch (Exception e) {
AnalysisLogger.getLogger().debug("Error in closing DB connections "+e.getLocalizedMessage());
} }
} }

1
src/main/java/org/gcube/dataanalysis/ecoengine/models/FeedForwardNN.java
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@ -200,6 +200,7 @@ public class FeedForwardNN extends ModelAquamapsNN{
e.printStackTrace(); e.printStackTrace();
AnalysisLogger.getLogger().error("ERROR during training"); AnalysisLogger.getLogger().error("ERROR during training");
} }
status = 100f; status = 100f;
} }

7
src/main/java/org/gcube/dataanalysis/ecoengine/models/ModelAquamapsNN.java
View File

@ -153,7 +153,12 @@ public class ModelAquamapsNN implements Model {
@Override @Override
public void postprocess(AlgorithmConfiguration Input, Model previousModel) { public void postprocess(AlgorithmConfiguration Input, Model previousModel) {
connection.close(); AnalysisLogger.getLogger().debug("Closing DB Connection");
try{
connection.close();
}catch(Exception e){
AnalysisLogger.getLogger().debug("Error in Closing DB Connection "+e.getLocalizedMessage());
}
} }
// private String takeElementsQuery = "select depthmean,depthmax,depthmin, sstanmean,sbtanmean,salinitymean,salinitybmean, primprodmean,iceconann,landdist,oceanarea,centerlat,centerlong from %1$s d where oceanarea>0 limit 100"; // private String takeElementsQuery = "select depthmean,depthmax,depthmin, sstanmean,sbtanmean,salinitymean,salinitybmean, primprodmean,iceconann,landdist,oceanarea,centerlat,centerlong from %1$s d where oceanarea>0 limit 100";

3
src/main/java/org/gcube/dataanalysis/ecoengine/processing/LocalSplitGenerator.java
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@ -220,8 +220,9 @@ public class LocalSplitGenerator implements Generator {
} }
} }
AnalysisLogger.getLogger().trace("CLOSING CONNECTIONS"); AnalysisLogger.getLogger().trace("CLOSING CONNECTIONS");
try{
dbHibConnection.close(); dbHibConnection.close();
}catch(Exception eee){}
} }
// waits for thread to be free // waits for thread to be free

2
src/main/java/org/gcube/dataanalysis/ecoengine/spatialdistributions/BayesianDistribution.java
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@ -140,7 +140,7 @@ public abstract class BayesianDistribution implements SpatialProbabilityDistribu
@Override @Override
public void postProcess() { public void postProcess() {
status = 100f; status = 100f;
if (dbConnection==null){ if (dbConnection!=null){
dbConnection.close(); dbConnection.close();
} }
} }

25
src/main/java/org/gcube/dataanalysis/ecoengine/test/ProduceTestMap.java
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@ -5,7 +5,32 @@ import org.gcube.dataanalysis.ecoengine.user.ModelerT;
public class ProduceTestMap { public class ProduceTestMap {
public static void main2(String[] args) throws Exception {
StringBuffer create = new StringBuffer("CREATE TABLE mahoutclustering("+System.getProperty("line.separator"));
int max =60;
for (int i=0;i<max;i++){
create.append("field"+i+" real");
if (i<max-1)
create.append(","+System.getProperty("line.separator"));
}
create.append(")");
System.out.println(create);
}
public static void main(String[] args) throws Exception { public static void main(String[] args) throws Exception {
StringBuffer create = new StringBuffer("");
int max =60;
for (int i=0;i<max;i++){
create.append("field"+i);
if (i<max-1)
create.append("#");
}
System.out.println(create);
}
public static void main1(String[] args) throws Exception {
String configPath = "./cfg/"; String configPath = "./cfg/";
String presenceTable = "presence_data_baskingshark"; String presenceTable = "presence_data_baskingshark";
String absenceTable = "absence_data_baskingshark_random"; String absenceTable = "absence_data_baskingshark_random";

34
src/main/java/org/gcube/dataanalysis/ecoengine/test/checks/TestClusterer.java
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@ -18,7 +18,7 @@ public class TestClusterer {
public static void main(String[] args) throws Exception { public static void main(String[] args) throws Exception {
System.out.println("TEST 1"); System.out.println("TEST 1");
List<Clusterer> clus = ClusterersFactory.getClusterers(testConfigLocal()); List<Clusterer> clus = ClusterersFactory.getClusterers(testConfigLocal2());
clus .get(0).init(); clus .get(0).init();
cluster(clus .get(0)); cluster(clus .get(0));
clus = null; clus = null;
@ -65,9 +65,9 @@ public class TestClusterer {
AlgorithmConfiguration config = new AlgorithmConfiguration(); AlgorithmConfiguration config = new AlgorithmConfiguration();
config.setConfigPath("./cfg/"); config.setConfigPath("./cfg/");
config.setPersistencePath("./"); config.setPersistencePath("./");
config.setParam("OccurrencePointsTable","occurrence_species_id5397d3c4_a7eb_4227_adb4_d9d7d36e8b21"); config.setParam("OccurrencePointsTable","mahoutclustering");
config.setParam("FeaturesColumnNames","recordedby#basisofrecord#locality"); config.setParam("FeaturesColumnNames","recordedby#basisofrecord#locality");
config.setParam("OccurrencePointsClusterTable","occCluster_gp"); config.setParam("OccurrencePointsClusterTable","occCluster_mahout");
config.setParam("epsilon","10"); config.setParam("epsilon","10");
config.setParam("min_points","1"); config.setParam("min_points","1");
@ -84,4 +84,32 @@ public class TestClusterer {
return config; return config;
} }
private static AlgorithmConfiguration testConfigLocal2() {
AlgorithmConfiguration config = new AlgorithmConfiguration();
config.setConfigPath("./cfg/");
config.setPersistencePath("./");
config.setParam("OccurrencePointsTable","generic_idbff59a4c_cada_4447_96b1_5d9a67f89fe8");
config.setParam("FeaturesColumnNames","x#y");
config.setParam("OccurrencePointsClusterTable","occCluster_nafo");
config.setParam("k","10");
config.setParam("max_runs","300");
config.setParam("max_optimization_steps","1");
config.setParam("min_points","1");
config.setConfigPath("./cfg/");
config.setPersistencePath("./");
config.setNumberOfResources(1);
config.setAgent("KMEANS");
/*
config.setParam("DatabaseUserName","utente");
config.setParam("DatabasePassword","d4science");
config.setParam("DatabaseURL","jdbc:postgresql://dbtest.next.research-infrastructures.eu/testdb");
config.setParam("DatabaseDriver","org.postgresql.Driver");
*/
return config;
}
} }

84
src/main/java/org/gcube/dataanalysis/ecoengine/test/checks/TestDBNEXTEvaluators.java
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@ -57,7 +57,7 @@ public static void main(String[] args) throws Exception {
*/ */
// List<Evaluator> trans = null; // List<Evaluator> trans = null;
// trans = EvaluatorsFactory.getEvaluators(testConfigLocal12()); // trans = EvaluatorsFactory.getEvaluators(testConfigLocal12());
List<Transducerer> trans = TransducerersFactory.getTransducerers(testConfigLocal4()); List<Transducerer> trans = TransducerersFactory.getTransducerers(testConfigLocal5c());
trans.get(0).init(); trans.get(0).init();
Regressor.process(trans.get(0)); Regressor.process(trans.get(0));
@ -136,16 +136,94 @@ public static void main(String[] args) throws Exception {
config.setParam("scientificNameColumn", "scientificname"); config.setParam("scientificNameColumn", "scientificname");
config.setParam("eventDateColumn", "eventdate"); config.setParam("eventDateColumn", "eventdate");
config.setParam("lastModificationColumn", "modified"); config.setParam("lastModificationColumn", "modified");
config.setParam("rightTableName", "occurrencetestduplicates2"); // config.setParam("rightTableName", "occurrencetestduplicates2");
config.setParam("leftTableName", "occurrencetestduplicates"); // config.setParam("leftTableName", "occurrencetestduplicates");
config.setParam("rightTableName", "occurrence_species_id7a77d613_c21d_495d_8a04_b9534cf5e159");
config.setParam("leftTableName", "processedoccurrences_id_6d416554_7a06_422f_8f4c_a65051025221");
config.setParam("finalTableName", "occurrencesmerged"); config.setParam("finalTableName", "occurrencesmerged");
config.setParam("spatialTolerance", "0.5"); config.setParam("spatialTolerance", "0.5");
config.setParam("confidence", "90"); config.setParam("confidence", "90");
config.setParam("DatabaseUserName","utente");
config.setParam("DatabasePassword","d4science");
config.setParam("DatabaseURL","jdbc:postgresql://dbtest.research-infrastructures.eu/testdb");
config.setParam("DatabaseDriver","org.postgresql.Driver");
return config; return config;
} }
private static AlgorithmConfiguration testConfigLocal5b() {
AlgorithmConfiguration config = Regressor.getConfig();
config.setAgent("OCCURRENCES_SUBTRACTION");
config.setParam("longitudeColumn", "decimallongitude");
config.setParam("latitudeColumn", "decimallatitude");
config.setParam("recordedByColumn", "recordedby");
config.setParam("scientificNameColumn", "scientificname");
config.setParam("eventDateColumn", "eventdate");
config.setParam("lastModificationColumn", "modified");
/*
config.setParam("rightTableName", "occurrence_species2");
config.setParam("leftTableName", "occurrence_species1");
*/
/*
config.setParam("rightTableName", "occurrence_species_id1e8f7b48_b99a_48a3_8b52_89976fd79cd4");
config.setParam("leftTableName", "occurrence_species_id0045886b_2a7c_4ede_afc4_3157c694b893");
*/
config.setParam("rightTableName", "occurrence_species_id7a77d613_c21d_495d_8a04_b9534cf5e159");
config.setParam("leftTableName", "occurrence_species_idbb2931ef_af2c_495a_ad5f_4ef81ad16159");
config.setParam("finalTableName", "occurrencessubtracted2");
config.setParam("spatialTolerance", "0.000001");
config.setParam("confidence", "90");
config.setParam("DatabaseUserName","utente");
config.setParam("DatabasePassword","d4science");
config.setParam("DatabaseURL","jdbc:postgresql://dbtest.research-infrastructures.eu/testdb");
config.setParam("DatabaseDriver","org.postgresql.Driver");
return config;
}
private static AlgorithmConfiguration testConfigLocal5c() {
AlgorithmConfiguration config = Regressor.getConfig();
config.setAgent("OCCURRENCES_INTERSECTOR");
config.setParam("longitudeColumn", "decimallongitude");
config.setParam("latitudeColumn", "decimallatitude");
config.setParam("recordedByColumn", "recordedby");
config.setParam("scientificNameColumn", "scientificname");
config.setParam("eventDateColumn", "eventdate");
config.setParam("lastModificationColumn", "modified");
/*
config.setParam("rightTableName", "occurrence_species2");
config.setParam("leftTableName", "occurrence_species1");
*/
/*
config.setParam("rightTableName", "occurrence_species_id1e8f7b48_b99a_48a3_8b52_89976fd79cd4");
config.setParam("leftTableName", "occurrence_species_id0045886b_2a7c_4ede_afc4_3157c694b893");
*/
config.setParam("leftTableName", "occurrence_species_idbb2931ef_af2c_495a_ad5f_4ef81ad16159");
config.setParam("rightTableName", "occurrence_species_id7a77d613_c21d_495d_8a04_b9534cf5e159");
config.setParam("finalTableName", "occurrencesintersected");
config.setParam("spatialTolerance", "0.000001");
config.setParam("confidence", "90");
config.setParam("DatabaseUserName","utente");
config.setParam("DatabasePassword","d4science");
config.setParam("DatabaseURL","jdbc:postgresql://dbtest.research-infrastructures.eu/testdb");
config.setParam("DatabaseDriver","org.postgresql.Driver");
return config;
}
private static AlgorithmConfiguration testConfigLocal6() { private static AlgorithmConfiguration testConfigLocal6() {
AlgorithmConfiguration config = Regressor.getConfig(); AlgorithmConfiguration config = Regressor.getConfig();

112
src/main/java/org/gcube/dataanalysis/ecoengine/test/checks/TestMahoutComparison.java Normal file
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@ -0,0 +1,112 @@
package org.gcube.dataanalysis.ecoengine.test.checks;
import java.util.HashMap;
import java.util.List;
import org.gcube.dataanalysis.ecoengine.configuration.AlgorithmConfiguration;
import org.gcube.dataanalysis.ecoengine.datatypes.InputTable;
import org.gcube.dataanalysis.ecoengine.datatypes.PrimitiveType;
import org.gcube.dataanalysis.ecoengine.datatypes.StatisticalType;
import org.gcube.dataanalysis.ecoengine.datatypes.enumtypes.PrimitiveTypes;
import org.gcube.dataanalysis.ecoengine.evaluation.DiscrepancyAnalysis;
import org.gcube.dataanalysis.ecoengine.evaluation.bioclimate.InterpolateTables.INTERPOLATIONFUNCTIONS;
import org.gcube.dataanalysis.ecoengine.interfaces.Clusterer;
import org.gcube.dataanalysis.ecoengine.interfaces.Evaluator;
import org.gcube.dataanalysis.ecoengine.interfaces.Transducerer;
import org.gcube.dataanalysis.ecoengine.processing.factories.ClusterersFactory;
import org.gcube.dataanalysis.ecoengine.processing.factories.EvaluatorsFactory;
import org.gcube.dataanalysis.ecoengine.processing.factories.TransducerersFactory;
import org.gcube.dataanalysis.ecoengine.test.regression.Regressor;
public class TestMahoutComparison {
public static void main(String[] args) throws Exception {
System.out.println("TEST 1");
/*
trans = TransducerersFactory.getTransducerers(testConfigLocal());
trans.get(0).init();
Regressor.process(trans.get(0));
trans = null;
trans = TransducerersFactory.getTransducerers(testConfigLocal2());
trans.get(0).init();
Regressor.process(trans.get(0));
trans = null;
trans = TransducerersFactory.getTransducerers(testConfigLocal3());
trans.get(0).init();
Regressor.process(trans.get(0));
trans = null;
trans = TransducerersFactory.getTransducerers(testConfigLocal4());
trans.get(0).init();
Regressor.process(trans.get(0));
trans = null;
*/
/*
trans = TransducerersFactory.getTransducerers(testConfigLocal8());
trans.get(0).init();
Regressor.process(trans.get(0));
trans = null;
trans = TransducerersFactory.getTransducerers(testConfigLocal6());
trans.get(0).init();
Regressor.process(trans.get(0));
trans = null;
*/
// List<Evaluator> trans = null;
// trans = EvaluatorsFactory.getEvaluators(testConfigLocal12());
List<Clusterer> trans = ClusterersFactory.getClusterers(testConfigLocal2());
trans.get(0).init();
Regressor.process(trans.get(0));
// PrimitiveType output = (PrimitiveType) trans.get(0).getOutput();
// HashMap<String, String> out = (HashMap<String, String>)output.getContent();
// DiscrepancyAnalysis.visualizeResults(out);
StatisticalType output = trans.get(0).getOutput();
trans = null;
}
private static AlgorithmConfiguration testConfigLocal() {
AlgorithmConfiguration config = Regressor.getConfig();
config.setNumberOfResources(1);
config.setAgent("DBSCAN");
config.setParam("OccurrencePointsTable","mahoutclustering");
config.setParam("FeaturesColumnNames","field0#field1#field2#field3#field4#field5#field6#field7#field8#field9#field10#field11#field12#field13#field14#field15#field16#field17#field18#field19#field20#field21#field22#field23#field24#field25#field26#field27#field28#field29#field30#field31#field32#field33#field34#field35#field36#field37#field38#field39#field40#field41#field42#field43#field44#field45#field46#field47#field48#field49#field50#field51#field52#field53#field54#field55#field56#field57#field58#field59");
config.setParam("OccurrencePointsClusterTable","occCluster_mahout");
config.setParam("epsilon","10");
config.setParam("min_points","1");
return config;
}
private static AlgorithmConfiguration testConfigLocal2() {
AlgorithmConfiguration config = Regressor.getConfig();
config.setNumberOfResources(1);
config.setAgent("KMEANS");
config.setParam("OccurrencePointsTable","mahoutclustering");
config.setParam("FeaturesColumnNames","field0#field1#field2#field3#field4#field5#field6#field7#field8#field9#field10#field11#field12#field13#field14#field15#field16#field17#field18#field19#field20#field21#field22#field23#field24#field25#field26#field27#field28#field29#field30#field31#field32#field33#field34#field35#field36#field37#field38#field39#field40#field41#field42#field43#field44#field45#field46#field47#field48#field49#field50#field51#field52#field53#field54#field55#field56#field57#field58#field59");
config.setParam("OccurrencePointsClusterTable","occCluster_mahout");
config.setParam("k","20");
config.setParam("max_runs","10");
config.setParam("max_optimization_steps","1");
config.setParam("min_points","1");
return config;
}
}

2
src/main/java/org/gcube/dataanalysis/ecoengine/transducers/OccurrencePointsInSeaOnEarth.java
View File

@ -107,7 +107,9 @@ public class OccurrencePointsInSeaOnEarth extends OccurrencePointsMerger{
throw e; throw e;
} finally { } finally {
if (dbconnection != null) if (dbconnection != null)
try{
dbconnection.close(); dbconnection.close();
}catch(Exception e2){}
status = 100; status = 100;
AnalysisLogger.getLogger().trace("Occ Points Processing Finished and db closed"); AnalysisLogger.getLogger().trace("Occ Points Processing Finished and db closed");
} }

2
src/main/java/org/gcube/dataanalysis/ecoengine/transducers/OccurrencePointsIntersector.java
View File

@ -8,7 +8,7 @@ import org.gcube.dataanalysis.ecoengine.utils.DatabaseUtils;
public class OccurrencePointsIntersector extends OccurrencePointsMerger{ public class OccurrencePointsIntersector extends OccurrencePointsMerger{
public OccurrencePointsIntersector(){ public OccurrencePointsIntersector(){
firstbest=false;
} }
@Override @Override

82
src/main/java/org/gcube/dataanalysis/ecoengine/transducers/OccurrencePointsMerger.java
View File

@ -42,7 +42,8 @@ public class OccurrencePointsMerger implements Transducerer {
static String finalTableNameF = "finalTableName"; static String finalTableNameF = "finalTableName";
static String spatialTolerance = "spatialTolerance"; static String spatialTolerance = "spatialTolerance";
static String confidence = "confidence"; static String confidence = "confidence";
static String sqlDateFormat="MM/DD/YYYY HH24:MI:SS";
static String javaDateFormat="MM/dd/yyyy HH:mm:ss";
protected List<OccurrenceRecord> records_left; protected List<OccurrenceRecord> records_left;
protected List<OccurrenceRecord> records_right; protected List<OccurrenceRecord> records_right;
@ -66,10 +67,10 @@ public class OccurrencePointsMerger implements Transducerer {
protected List<Object> columnsNames; protected List<Object> columnsNames;
protected SessionFactory dbconnection; protected SessionFactory dbconnection;
protected float status; protected float status;
protected boolean firstbest;
public OccurrencePointsMerger(){ public OccurrencePointsMerger(){
firstbest=true;
} }
protected class OccurrenceRecord { protected class OccurrenceRecord {
@ -80,9 +81,10 @@ public class OccurrencePointsMerger implements Transducerer {
public Calendar modifdate; public Calendar modifdate;
// public String locality; // public String locality;
// public String country; // public String country;
public float x; public double x;
public float y; public double y;
public String x$;
public String y$;
// Map<String,String> metadata; // Map<String,String> metadata;
public List<String> otherValues; public List<String> otherValues;
@ -94,7 +96,7 @@ public class OccurrencePointsMerger implements Transducerer {
public static String convert2conventionalFormat(Calendar date) { public static String convert2conventionalFormat(Calendar date) {
if (date == null) if (date == null)
return ""; return "";
SimpleDateFormat formatter = new SimpleDateFormat("MM/dd/yy KK:mm:ss a"); SimpleDateFormat formatter = new SimpleDateFormat(javaDateFormat);
String formattedDate = formatter.format(new Date(date.getTimeInMillis())); String formattedDate = formatter.format(new Date(date.getTimeInMillis()));
return formattedDate; return formattedDate;
} }
@ -109,9 +111,11 @@ public class OccurrencePointsMerger implements Transducerer {
String name$ = "" + name; String name$ = "" + name;
String value$ = "" + row[index]; String value$ = "" + row[index];
if (name$.equalsIgnoreCase(lonFld)) { if (name$.equalsIgnoreCase(lonFld)) {
record.x = Float.parseFloat(value$); record.x = Double.parseDouble(value$);
record.x$ = value$;
} else if (name$.equalsIgnoreCase(latFld)) { } else if (name$.equalsIgnoreCase(latFld)) {
record.y = Float.parseFloat(value$); record.y = Double.parseDouble(value$);
record.y$ = value$;
} else if (name$.equalsIgnoreCase(recordedByFld)) { } else if (name$.equalsIgnoreCase(recordedByFld)) {
record.recordedby = value$; record.recordedby = value$;
} else if (name$.equalsIgnoreCase(scientificNameFld)) { } else if (name$.equalsIgnoreCase(scientificNameFld)) {
@ -151,9 +155,9 @@ public class OccurrencePointsMerger implements Transducerer {
String name$ = "" + name; String name$ = "" + name;
String value$ = "NULL"; String value$ = "NULL";
if (name$.equalsIgnoreCase(lonFld)) { if (name$.equalsIgnoreCase(lonFld)) {
value$ = "'" + record.x + "'"; value$ = "'" + record.x$ + "'";
} else if (name$.equalsIgnoreCase(latFld)) { } else if (name$.equalsIgnoreCase(latFld)) {
value$ = "'" + record.y + "'"; value$ = "'" + record.y$ + "'";
} else if (name$.equalsIgnoreCase(recordedByFld)) { } else if (name$.equalsIgnoreCase(recordedByFld)) {
if (record.recordedby != null) if (record.recordedby != null)
value$ = "'" + record.recordedby.replace("'", "") + "'"; value$ = "'" + record.recordedby.replace("'", "") + "'";
@ -376,15 +380,16 @@ public class OccurrencePointsMerger implements Transducerer {
for (OccurrenceRecord record : objectstodelete) { for (OccurrenceRecord record : objectstodelete) {
String rec = recordedByFld + "='" + record.recordedby.replace("'","")+"'"; String rec = recordedByFld + "='" + record.recordedby.replace("'","")+"'";
String sci = scientificNameFld + "='" + record.scientificName.replace("'","")+"'"; String sci = scientificNameFld + "='" + record.scientificName.replace("'","")+"'";
String x = lonFld + "='" + record.x+"'"; String x = lonFld + "='" + record.x$+"'";
String y = latFld + "='" + record.y+"'"; String y = latFld + "='" + record.y$+"'";
String event = null; String event = null;
String modified = null; String modified = null;
if (record.eventdate!=null) if (record.eventdate!=null)
event = eventDatFld + "='" + convert2conventionalFormat(record.eventdate)+"'"; //to_timestamp('09/30/56 11:00:00 PM', 'MM/DD/YY HH12:MI:SS a')
event = eventDatFld + "=to_timestamp('" + convert2conventionalFormat(record.eventdate)+"','"+sqlDateFormat+"')";
if (record.modifdate!=null) if (record.modifdate!=null)
modified = modifDatFld + "='" + convert2conventionalFormat(record.modifdate)+"'"; modified = modifDatFld + "=to_timestamp('" + convert2conventionalFormat(record.modifdate)+"','"+sqlDateFormat+"')";
buffer.append("("); buffer.append("(");
buffer.append(rec + " AND " + sci + " AND " + x + " AND " + y); buffer.append(rec + " AND " + sci + " AND " + x + " AND " + y);
@ -401,7 +406,7 @@ public class OccurrencePointsMerger implements Transducerer {
} }
String updateQ = DatabaseUtils.deleteFromBuffer(finalTableName, buffer); String updateQ = DatabaseUtils.deleteFromBuffer(finalTableName, buffer);
// System.out.println("Update:\n"+updateQ); // AnalysisLogger.getLogger().debug("Update:\n"+updateQ);
DatabaseFactory.executeSQLUpdate(updateQ, dbconnection); DatabaseFactory.executeSQLUpdate(updateQ, dbconnection);
AnalysisLogger.getLogger().debug("Objects deleted"); AnalysisLogger.getLogger().debug("Objects deleted");
} }
@ -422,12 +427,17 @@ public class OccurrencePointsMerger implements Transducerer {
} }
String updateQ = DatabaseUtils.insertFromBuffer(finalTableName, columns.toString(), buffer); String updateQ = DatabaseUtils.insertFromBuffer(finalTableName, columns.toString(), buffer);
System.out.println("Update:\n"+updateQ); // System.out.println("Update:\n"+updateQ);
AnalysisLogger.getLogger().debug("Update:\n"+updateQ); // AnalysisLogger.getLogger().debug("Update:\n"+updateQ);
DatabaseFactory.executeSQLUpdate(updateQ, dbconnection); DatabaseFactory.executeSQLUpdate(updateQ, dbconnection);
AnalysisLogger.getLogger().debug("Objects inserted"); AnalysisLogger.getLogger().debug("Objects inserted");
} }
objectstoinsert = null;
objectstodelete= null;
objectstoinsert = new ArrayList<OccurrencePointsMerger.OccurrenceRecord>();
objectstodelete = new ArrayList<OccurrencePointsMerger.OccurrenceRecord>();
System.gc();
} }
protected void prepareFinalTable() throws Exception{ protected void prepareFinalTable() throws Exception{
DatabaseFactory.executeSQLUpdate(DatabaseUtils.duplicateTableStatement(leftTableName, finalTableName), dbconnection); DatabaseFactory.executeSQLUpdate(DatabaseUtils.duplicateTableStatement(leftTableName, finalTableName), dbconnection);
@ -489,6 +499,7 @@ public class OccurrencePointsMerger implements Transducerer {
for (Object lRow : leftRows) { for (Object lRow : leftRows) {
OccurrenceRecord leftOcc = null; OccurrenceRecord leftOcc = null;
// only for the first iteration on the left occurrences perform the transformation // only for the first iteration on the left occurrences perform the transformation
/*
if (leftrecordsSize <= k) { if (leftrecordsSize <= k) {
// transform into an occurrence object // transform into an occurrence object
leftOcc = row2OccurrenceRecord((Object[]) lRow); leftOcc = row2OccurrenceRecord((Object[]) lRow);
@ -497,7 +508,8 @@ public class OccurrencePointsMerger implements Transducerer {
// System.out.println("ADDED "+k+"-th elements size: "+leftRecords.size()); // System.out.println("ADDED "+k+"-th elements size: "+leftRecords.size());
} else } else
leftOcc = leftRecords.get(k); leftOcc = leftRecords.get(k);
*/
leftOcc = row2OccurrenceRecord((Object[]) lRow);
// evaluate P(dx,sx) // evaluate P(dx,sx)
p = extProb(leftOcc, rightOcc); p = extProb(leftOcc, rightOcc);
@ -505,18 +517,32 @@ public class OccurrencePointsMerger implements Transducerer {
bestleftOcc = leftOcc; bestleftOcc = leftOcc;
found = true; found = true;
similaritiesCounter++; similaritiesCounter++;
AnalysisLogger.getLogger().trace("Found a similarity with P=" + p + " between (" + "\"" + leftOcc.scientificName + "\"" + "," + leftOcc.x + "\"" + "," + "\"" + leftOcc.y + "\"" + "," + "\"" + leftOcc.recordedby + "\"" + "," + "\"" + convert2conventionalFormat(leftOcc.eventdate) + "\"" + ") VS " + "(" + "\"" + rightOcc.scientificName + "\"" + "," + "\"" + rightOcc.x + "\"" + "," + "\"" + rightOcc.y + "\"" + "," + "\"" + rightOcc.recordedby + "\"" + "," + "\"" + convert2conventionalFormat(rightOcc.eventdate) + "\"" + ")"); AnalysisLogger.getLogger().trace("Found a similarity with P=" + p + " between (" + "\"" + leftOcc.scientificName + "\"" + ",\"" + leftOcc.x + "\"" + "," + "\"" + leftOcc.y + "\"" + "," + "\"" + leftOcc.recordedby + "\"" + "," + "\"" + convert2conventionalFormat(leftOcc.eventdate) + "\"" + ") VS " + "(" + "\"" + rightOcc.scientificName + "\"" + "," + "\"" + rightOcc.x + "\"" + "," + "\"" + rightOcc.y + "\"" + "," + "\"" + rightOcc.recordedby + "\"" + "," + "\"" + convert2conventionalFormat(rightOcc.eventdate) + "\"" + ")");
break; // break;
if (!firstbest)
manageHighProbability(p, bestleftOcc, rightOcc);
else
break;
} }
else if (!firstbest)
manageLowProbability(p, bestleftOcc, rightOcc);
k++; k++;
} }
rightCounter++; rightCounter++;
if (found)
manageHighProbability(p, bestleftOcc, rightOcc); if (firstbest){
else if (found)
manageLowProbability(p, bestleftOcc, rightOcc); manageHighProbability(p, bestleftOcc, rightOcc);
else
manageLowProbability(p, bestleftOcc, rightOcc);
}
status = Math.min(90, 10f + (80 * ((float) rightCounter) / ((float) allrightrows))); status = Math.min(90, 10f + (80 * ((float) rightCounter) / ((float) allrightrows)));
if (rightCounter%500==0){
AnalysisLogger.getLogger().trace("Persisting ... "+rightCounter+" over "+allrightrows);
persist();
}
} }
AnalysisLogger.getLogger().trace("Found " + similaritiesCounter + " similarities on " + rightCounter + " elements"); AnalysisLogger.getLogger().trace("Found " + similaritiesCounter + " similarities on " + rightCounter + " elements");
@ -528,7 +554,9 @@ public class OccurrencePointsMerger implements Transducerer {
throw e; throw e;
} finally { } finally {
if (dbconnection != null) if (dbconnection != null)
try{
dbconnection.close(); dbconnection.close();
}catch(Exception e){}
status = 100; status = 100;
AnalysisLogger.getLogger().trace("Occ Points Processing Finished and db closed"); AnalysisLogger.getLogger().trace("Occ Points Processing Finished and db closed");
} }

25
src/main/java/org/gcube/dataanalysis/ecoengine/transducers/OccurrencePointsSubtraction.java Normal file
View File

@ -0,0 +1,25 @@
package org.gcube.dataanalysis.ecoengine.transducers;
public class OccurrencePointsSubtraction extends OccurrencePointsMerger{
public OccurrencePointsSubtraction(){
firstbest=false;
}
@Override
public String getDescription() {
return "An algorithm for subtracting a sets of occurrence points from another. Sets refer to species coming from the Species Discovery Facility of D4Science";
}
protected void manageHighProbability(float probability, OccurrenceRecord leftOcc, OccurrenceRecord rightOcc) {
//cancel the left Occ record matching the right
objectstodelete.add(leftOcc);
}
@Override
protected void manageLowProbability(float probability, OccurrenceRecord leftOcc, OccurrenceRecord rightOcc) {
}
}

2
src/main/java/org/gcube/dataanalysis/ecoengine/transducers/QueryExecutor.java
View File

@ -103,7 +103,9 @@ public class QueryExecutor implements Transducerer {
throw e; throw e;
} finally { } finally {
if (dbconnection != null) if (dbconnection != null)
try{
dbconnection.close(); dbconnection.close();
}catch(Exception e2){}
status = 100; status = 100;
AnalysisLogger.getLogger().trace("Processing Finished and db closed"); AnalysisLogger.getLogger().trace("Processing Finished and db closed");
} }

8
target/apidocs/allclasses-frame.html
View File

@ -2,13 +2,13 @@
<!--NewPage--> <!--NewPage-->
<HTML> <HTML>
<HEAD> <HEAD>
<!-- Generated by javadoc (build 1.6.0_26) on Mon Oct 22 11:35:56 CEST 2012 --> <!-- Generated by javadoc (build 1.6.0_26) on Wed Oct 31 16:08:44 CET 2012 -->
<META http-equiv="Content-Type" content="text/html; charset=UTF-8"> <META http-equiv="Content-Type" content="text/html; charset=UTF-8">
<TITLE> <TITLE>
All Classes (ecological-engine 1.4.0-SNAPSHOT API) All Classes (ecological-engine 1.4.0-SNAPSHOT API)
</TITLE> </TITLE>
<META NAME="date" CONTENT="2012-10-22"> <META NAME="date" CONTENT="2012-10-31">
<LINK REL ="stylesheet" TYPE="text/css" HREF="stylesheet.css" TITLE="Style"> <LINK REL ="stylesheet" TYPE="text/css" HREF="stylesheet.css" TITLE="Style">
@ -520,6 +520,8 @@ All Classes (ecological-engine 1.4.0-SNAPSHOT API)
<BR> <BR>
<A HREF="org/gcube/dataanalysis/ecoengine/test/checks/TestBayesianModels.html" title="class in org.gcube.dataanalysis.ecoengine.test.checks" target="classFrame">TestBayesianModels</A> <A HREF="org/gcube/dataanalysis/ecoengine/test/checks/TestBayesianModels.html" title="class in org.gcube.dataanalysis.ecoengine.test.checks" target="classFrame">TestBayesianModels</A>
<BR> <BR>
<A HREF="org/gcube/dataanalysis/ecoengine/test/checks/TestBayesianModelsDBTest.html" title="class in org.gcube.dataanalysis.ecoengine.test.checks" target="classFrame">TestBayesianModelsDBTest</A>
<BR>
<A HREF="org/gcube/dataanalysis/ecoengine/test/checks/TestBioClimateAnalysis.html" title="class in org.gcube.dataanalysis.ecoengine.test.checks" target="classFrame">TestBioClimateAnalysis</A> <A HREF="org/gcube/dataanalysis/ecoengine/test/checks/TestBioClimateAnalysis.html" title="class in org.gcube.dataanalysis.ecoengine.test.checks" target="classFrame">TestBioClimateAnalysis</A>
<BR> <BR>
<A HREF="org/gcube/dataanalysis/ecoengine/test/checks/TestClusterer.html" title="class in org.gcube.dataanalysis.ecoengine.test.checks" target="classFrame">TestClusterer</A> <A HREF="org/gcube/dataanalysis/ecoengine/test/checks/TestClusterer.html" title="class in org.gcube.dataanalysis.ecoengine.test.checks" target="classFrame">TestClusterer</A>
@ -542,6 +544,8 @@ All Classes (ecological-engine 1.4.0-SNAPSHOT API)
<BR> <BR>
<A HREF="org/gcube/dataanalysis/ecoengine/test/checks/TestHSPECBioClimateAnalysisProd.html" title="class in org.gcube.dataanalysis.ecoengine.test.checks" target="classFrame">TestHSPECBioClimateAnalysisProd</A> <A HREF="org/gcube/dataanalysis/ecoengine/test/checks/TestHSPECBioClimateAnalysisProd.html" title="class in org.gcube.dataanalysis.ecoengine.test.checks" target="classFrame">TestHSPECBioClimateAnalysisProd</A>
<BR> <BR>
<A HREF="org/gcube/dataanalysis/ecoengine/test/checks/TestMahoutComparison.html" title="class in org.gcube.dataanalysis.ecoengine.test.checks" target="classFrame">TestMahoutComparison</A>
<BR>
<A HREF="org/gcube/dataanalysis/ecoengine/test/neuralnetwork/TestNN.html" title="class in org.gcube.dataanalysis.ecoengine.test.neuralnetwork" target="classFrame">TestNN</A> <A HREF="org/gcube/dataanalysis/ecoengine/test/neuralnetwork/TestNN.html" title="class in org.gcube.dataanalysis.ecoengine.test.neuralnetwork" target="classFrame">TestNN</A>
<BR> <BR>
<A HREF="org/gcube/dataanalysis/ecoengine/test/checks/TestsDUMMYGeneration.html" title="class in org.gcube.dataanalysis.ecoengine.test.checks" target="classFrame">TestsDUMMYGeneration</A> <A HREF="org/gcube/dataanalysis/ecoengine/test/checks/TestsDUMMYGeneration.html" title="class in org.gcube.dataanalysis.ecoengine.test.checks" target="classFrame">TestsDUMMYGeneration</A>

8
target/apidocs/allclasses-noframe.html
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@ -2,13 +2,13 @@
<!--NewPage--> <!--NewPage-->
<HTML> <HTML>
<HEAD> <HEAD>
<!-- Generated by javadoc (build 1.6.0_26) on Mon Oct 22 11:35:56 CEST 2012 --> <!-- Generated by javadoc (build 1.6.0_26) on Wed Oct 31 16:08:44 CET 2012 -->
<META http-equiv="Content-Type" content="text/html; charset=UTF-8"> <META http-equiv="Content-Type" content="text/html; charset=UTF-8">
<TITLE> <TITLE>
All Classes (ecological-engine 1.4.0-SNAPSHOT API) All Classes (ecological-engine 1.4.0-SNAPSHOT API)
</TITLE> </TITLE>
<META NAME="date" CONTENT="2012-10-22"> <META NAME="date" CONTENT="2012-10-31">
<LINK REL ="stylesheet" TYPE="text/css" HREF="stylesheet.css" TITLE="Style"> <LINK REL ="stylesheet" TYPE="text/css" HREF="stylesheet.css" TITLE="Style">
@ -520,6 +520,8 @@ All Classes (ecological-engine 1.4.0-SNAPSHOT API)
<BR> <BR>
<A HREF="org/gcube/dataanalysis/ecoengine/test/checks/TestBayesianModels.html" title="class in org.gcube.dataanalysis.ecoengine.test.checks">TestBayesianModels</A> <A HREF="org/gcube/dataanalysis/ecoengine/test/checks/TestBayesianModels.html" title="class in org.gcube.dataanalysis.ecoengine.test.checks">TestBayesianModels</A>
<BR> <BR>
<A HREF="org/gcube/dataanalysis/ecoengine/test/checks/TestBayesianModelsDBTest.html" title="class in org.gcube.dataanalysis.ecoengine.test.checks">TestBayesianModelsDBTest</A>
<BR>
<A HREF="org/gcube/dataanalysis/ecoengine/test/checks/TestBioClimateAnalysis.html" title="class in org.gcube.dataanalysis.ecoengine.test.checks">TestBioClimateAnalysis</A> <A HREF="org/gcube/dataanalysis/ecoengine/test/checks/TestBioClimateAnalysis.html" title="class in org.gcube.dataanalysis.ecoengine.test.checks">TestBioClimateAnalysis</A>
<BR> <BR>
<A HREF="org/gcube/dataanalysis/ecoengine/test/checks/TestClusterer.html" title="class in org.gcube.dataanalysis.ecoengine.test.checks">TestClusterer</A> <A HREF="org/gcube/dataanalysis/ecoengine/test/checks/TestClusterer.html" title="class in org.gcube.dataanalysis.ecoengine.test.checks">TestClusterer</A>
@ -542,6 +544,8 @@ All Classes (ecological-engine 1.4.0-SNAPSHOT API)
<BR> <BR>
<A HREF="org/gcube/dataanalysis/ecoengine/test/checks/TestHSPECBioClimateAnalysisProd.html" title="class in org.gcube.dataanalysis.ecoengine.test.checks">TestHSPECBioClimateAnalysisProd</A> <A HREF="org/gcube/dataanalysis/ecoengine/test/checks/TestHSPECBioClimateAnalysisProd.html" title="class in org.gcube.dataanalysis.ecoengine.test.checks">TestHSPECBioClimateAnalysisProd</A>
<BR> <BR>
<A HREF="org/gcube/dataanalysis/ecoengine/test/checks/TestMahoutComparison.html" title="class in org.gcube.dataanalysis.ecoengine.test.checks">TestMahoutComparison</A>
<BR>
<A HREF="org/gcube/dataanalysis/ecoengine/test/neuralnetwork/TestNN.html" title="class in org.gcube.dataanalysis.ecoengine.test.neuralnetwork">TestNN</A> <A HREF="org/gcube/dataanalysis/ecoengine/test/neuralnetwork/TestNN.html" title="class in org.gcube.dataanalysis.ecoengine.test.neuralnetwork">TestNN</A>
<BR> <BR>
<A HREF="org/gcube/dataanalysis/ecoengine/test/checks/TestsDUMMYGeneration.html" title="class in org.gcube.dataanalysis.ecoengine.test.checks">TestsDUMMYGeneration</A> <A HREF="org/gcube/dataanalysis/ecoengine/test/checks/TestsDUMMYGeneration.html" title="class in org.gcube.dataanalysis.ecoengine.test.checks">TestsDUMMYGeneration</A>

4
target/apidocs/constant-values.html
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@ -2,13 +2,13 @@
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<HTML> <HTML>
<HEAD> <HEAD>
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<META http-equiv="Content-Type" content="text/html; charset=UTF-8"> <META http-equiv="Content-Type" content="text/html; charset=UTF-8">
<TITLE> <TITLE>
Constant Field Values (ecological-engine 1.4.0-SNAPSHOT API) Constant Field Values (ecological-engine 1.4.0-SNAPSHOT API)
</TITLE> </TITLE>
<META NAME="date" CONTENT="2012-10-22"> <META NAME="date" CONTENT="2012-10-31">
<LINK REL ="stylesheet" TYPE="text/css" HREF="stylesheet.css" TITLE="Style"> <LINK REL ="stylesheet" TYPE="text/css" HREF="stylesheet.css" TITLE="Style">

4
target/apidocs/deprecated-list.html
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@ -2,13 +2,13 @@
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<HTML> <HTML>
<HEAD> <HEAD>
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<META http-equiv="Content-Type" content="text/html; charset=UTF-8"> <META http-equiv="Content-Type" content="text/html; charset=UTF-8">
<TITLE> <TITLE>
Deprecated List (ecological-engine 1.4.0-SNAPSHOT API) Deprecated List (ecological-engine 1.4.0-SNAPSHOT API)
</TITLE> </TITLE>
<META NAME="date" CONTENT="2012-10-22"> <META NAME="date" CONTENT="2012-10-31">
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4
target/apidocs/help-doc.html
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@ -2,13 +2,13 @@
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<META http-equiv="Content-Type" content="text/html; charset=UTF-8"> <META http-equiv="Content-Type" content="text/html; charset=UTF-8">
<TITLE> <TITLE>
API Help (ecological-engine 1.4.0-SNAPSHOT API) API Help (ecological-engine 1.4.0-SNAPSHOT API)
</TITLE> </TITLE>
<META NAME="date" CONTENT="2012-10-22"> <META NAME="date" CONTENT="2012-10-31">
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25
target/apidocs/index-all.html
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@ -2,13 +2,13 @@
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<HTML> <HTML>
<HEAD> <HEAD>
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<META http-equiv="Content-Type" content="text/html; charset=UTF-8"> <META http-equiv="Content-Type" content="text/html; charset=UTF-8">
<TITLE> <TITLE>
Index (ecological-engine 1.4.0-SNAPSHOT API) Index (ecological-engine 1.4.0-SNAPSHOT API)
</TITLE> </TITLE>
<META NAME="date" CONTENT="2012-10-22"> <META NAME="date" CONTENT="2012-10-31">
<LINK REL ="stylesheet" TYPE="text/css" HREF="./stylesheet.css" TITLE="Style"> <LINK REL ="stylesheet" TYPE="text/css" HREF="./stylesheet.css" TITLE="Style">
@ -4766,6 +4766,9 @@ Static method in class org.gcube.dataanalysis.ecoengine.test.checks.<A HREF="./o
<DT><A HREF="./org/gcube/dataanalysis/ecoengine/test/checks/TestBayesianModels.html#main(java.lang.String[])"><B>main(String[])</B></A> - <DT><A HREF="./org/gcube/dataanalysis/ecoengine/test/checks/TestBayesianModels.html#main(java.lang.String[])"><B>main(String[])</B></A> -
Static method in class org.gcube.dataanalysis.ecoengine.test.checks.<A HREF="./org/gcube/dataanalysis/ecoengine/test/checks/TestBayesianModels.html" title="class in org.gcube.dataanalysis.ecoengine.test.checks">TestBayesianModels</A> Static method in class org.gcube.dataanalysis.ecoengine.test.checks.<A HREF="./org/gcube/dataanalysis/ecoengine/test/checks/TestBayesianModels.html" title="class in org.gcube.dataanalysis.ecoengine.test.checks">TestBayesianModels</A>
<DD>&nbsp; <DD>&nbsp;
<DT><A HREF="./org/gcube/dataanalysis/ecoengine/test/checks/TestBayesianModelsDBTest.html#main(java.lang.String[])"><B>main(String[])</B></A> -
Static method in class org.gcube.dataanalysis.ecoengine.test.checks.<A HREF="./org/gcube/dataanalysis/ecoengine/test/checks/TestBayesianModelsDBTest.html" title="class in org.gcube.dataanalysis.ecoengine.test.checks">TestBayesianModelsDBTest</A>
<DD>&nbsp;
<DT><A HREF="./org/gcube/dataanalysis/ecoengine/test/checks/TestBioClimateAnalysis.html#main(java.lang.String[])"><B>main(String[])</B></A> - <DT><A HREF="./org/gcube/dataanalysis/ecoengine/test/checks/TestBioClimateAnalysis.html#main(java.lang.String[])"><B>main(String[])</B></A> -
Static method in class org.gcube.dataanalysis.ecoengine.test.checks.<A HREF="./org/gcube/dataanalysis/ecoengine/test/checks/TestBioClimateAnalysis.html" title="class in org.gcube.dataanalysis.ecoengine.test.checks">TestBioClimateAnalysis</A> Static method in class org.gcube.dataanalysis.ecoengine.test.checks.<A HREF="./org/gcube/dataanalysis/ecoengine/test/checks/TestBioClimateAnalysis.html" title="class in org.gcube.dataanalysis.ecoengine.test.checks">TestBioClimateAnalysis</A>
<DD>&nbsp; <DD>&nbsp;
@ -4784,6 +4787,9 @@ Static method in class org.gcube.dataanalysis.ecoengine.test.checks.<A HREF="./o
<DT><A HREF="./org/gcube/dataanalysis/ecoengine/test/checks/TestHSPECBioClimateAnalysisProd.html#main(java.lang.String[])"><B>main(String[])</B></A> - <DT><A HREF="./org/gcube/dataanalysis/ecoengine/test/checks/TestHSPECBioClimateAnalysisProd.html#main(java.lang.String[])"><B>main(String[])</B></A> -
Static method in class org.gcube.dataanalysis.ecoengine.test.checks.<A HREF="./org/gcube/dataanalysis/ecoengine/test/checks/TestHSPECBioClimateAnalysisProd.html" title="class in org.gcube.dataanalysis.ecoengine.test.checks">TestHSPECBioClimateAnalysisProd</A> Static method in class org.gcube.dataanalysis.ecoengine.test.checks.<A HREF="./org/gcube/dataanalysis/ecoengine/test/checks/TestHSPECBioClimateAnalysisProd.html" title="class in org.gcube.dataanalysis.ecoengine.test.checks">TestHSPECBioClimateAnalysisProd</A>
<DD>&nbsp; <DD>&nbsp;
<DT><A HREF="./org/gcube/dataanalysis/ecoengine/test/checks/TestMahoutComparison.html#main(java.lang.String[])"><B>main(String[])</B></A> -
Static method in class org.gcube.dataanalysis.ecoengine.test.checks.<A HREF="./org/gcube/dataanalysis/ecoengine/test/checks/TestMahoutComparison.html" title="class in org.gcube.dataanalysis.ecoengine.test.checks">TestMahoutComparison</A>
<DD>&nbsp;
<DT><A HREF="./org/gcube/dataanalysis/ecoengine/test/checks/TestsDUMMYGeneration.html#main(java.lang.String[])"><B>main(String[])</B></A> - <DT><A HREF="./org/gcube/dataanalysis/ecoengine/test/checks/TestsDUMMYGeneration.html#main(java.lang.String[])"><B>main(String[])</B></A> -
Static method in class org.gcube.dataanalysis.ecoengine.test.checks.<A HREF="./org/gcube/dataanalysis/ecoengine/test/checks/TestsDUMMYGeneration.html" title="class in org.gcube.dataanalysis.ecoengine.test.checks">TestsDUMMYGeneration</A> Static method in class org.gcube.dataanalysis.ecoengine.test.checks.<A HREF="./org/gcube/dataanalysis/ecoengine/test/checks/TestsDUMMYGeneration.html" title="class in org.gcube.dataanalysis.ecoengine.test.checks">TestsDUMMYGeneration</A>
<DD>example of parallel processing on a single machine the procedure will generate a new table for a distribution on suitable species <DD>example of parallel processing on a single machine the procedure will generate a new table for a distribution on suitable species
@ -4871,6 +4877,9 @@ Static method in class org.gcube.dataanalysis.ecoengine.clustering.<A HREF="./or
<DT><A HREF="./org/gcube/dataanalysis/ecoengine/test/checks/TestBayesianModels.html#main1(java.lang.String[])"><B>main1(String[])</B></A> - <DT><A HREF="./org/gcube/dataanalysis/ecoengine/test/checks/TestBayesianModels.html#main1(java.lang.String[])"><B>main1(String[])</B></A> -
Static method in class org.gcube.dataanalysis.ecoengine.test.checks.<A HREF="./org/gcube/dataanalysis/ecoengine/test/checks/TestBayesianModels.html" title="class in org.gcube.dataanalysis.ecoengine.test.checks">TestBayesianModels</A> Static method in class org.gcube.dataanalysis.ecoengine.test.checks.<A HREF="./org/gcube/dataanalysis/ecoengine/test/checks/TestBayesianModels.html" title="class in org.gcube.dataanalysis.ecoengine.test.checks">TestBayesianModels</A>
<DD>example of parallel processing on a single machine the procedure will generate a new table for a distribution on suitable species <DD>example of parallel processing on a single machine the procedure will generate a new table for a distribution on suitable species
<DT><A HREF="./org/gcube/dataanalysis/ecoengine/test/checks/TestBayesianModelsDBTest.html#main1(java.lang.String[])"><B>main1(String[])</B></A> -
Static method in class org.gcube.dataanalysis.ecoengine.test.checks.<A HREF="./org/gcube/dataanalysis/ecoengine/test/checks/TestBayesianModelsDBTest.html" title="class in org.gcube.dataanalysis.ecoengine.test.checks">TestBayesianModelsDBTest</A>
<DD>example of parallel processing on a single machine the procedure will generate a new table for a distribution on suitable species
<DT><A HREF="./org/gcube/dataanalysis/ecoengine/test/checks/TestBioClimateAnalysis.html#main1(java.lang.String[])"><B>main1(String[])</B></A> - <DT><A HREF="./org/gcube/dataanalysis/ecoengine/test/checks/TestBioClimateAnalysis.html#main1(java.lang.String[])"><B>main1(String[])</B></A> -
Static method in class org.gcube.dataanalysis.ecoengine.test.checks.<A HREF="./org/gcube/dataanalysis/ecoengine/test/checks/TestBioClimateAnalysis.html" title="class in org.gcube.dataanalysis.ecoengine.test.checks">TestBioClimateAnalysis</A> Static method in class org.gcube.dataanalysis.ecoengine.test.checks.<A HREF="./org/gcube/dataanalysis/ecoengine/test/checks/TestBioClimateAnalysis.html" title="class in org.gcube.dataanalysis.ecoengine.test.checks">TestBioClimateAnalysis</A>
<DD>&nbsp; <DD>&nbsp;
@ -4880,9 +4889,15 @@ Static method in class org.gcube.dataanalysis.ecoengine.test.experiments.latimer
<DT><A HREF="./org/gcube/dataanalysis/ecoengine/test/neuralnetwork/TestNN.html#main1(java.lang.String[])"><B>main1(String[])</B></A> - <DT><A HREF="./org/gcube/dataanalysis/ecoengine/test/neuralnetwork/TestNN.html#main1(java.lang.String[])"><B>main1(String[])</B></A> -
Static method in class org.gcube.dataanalysis.ecoengine.test.neuralnetwork.<A HREF="./org/gcube/dataanalysis/ecoengine/test/neuralnetwork/TestNN.html" title="class in org.gcube.dataanalysis.ecoengine.test.neuralnetwork">TestNN</A> Static method in class org.gcube.dataanalysis.ecoengine.test.neuralnetwork.<A HREF="./org/gcube/dataanalysis/ecoengine/test/neuralnetwork/TestNN.html" title="class in org.gcube.dataanalysis.ecoengine.test.neuralnetwork">TestNN</A>
<DD>&nbsp; <DD>&nbsp;
<DT><A HREF="./org/gcube/dataanalysis/ecoengine/test/ProduceTestMap.html#main1(java.lang.String[])"><B>main1(String[])</B></A> -
Static method in class org.gcube.dataanalysis.ecoengine.test.<A HREF="./org/gcube/dataanalysis/ecoengine/test/ProduceTestMap.html" title="class in org.gcube.dataanalysis.ecoengine.test">ProduceTestMap</A>
<DD>&nbsp;
<DT><A HREF="./org/gcube/dataanalysis/ecoengine/utils/Operations.html#main1(java.lang.String[])"><B>main1(String[])</B></A> - <DT><A HREF="./org/gcube/dataanalysis/ecoengine/utils/Operations.html#main1(java.lang.String[])"><B>main1(String[])</B></A> -
Static method in class org.gcube.dataanalysis.ecoengine.utils.<A HREF="./org/gcube/dataanalysis/ecoengine/utils/Operations.html" title="class in org.gcube.dataanalysis.ecoengine.utils">Operations</A> Static method in class org.gcube.dataanalysis.ecoengine.utils.<A HREF="./org/gcube/dataanalysis/ecoengine/utils/Operations.html" title="class in org.gcube.dataanalysis.ecoengine.utils">Operations</A>
<DD>&nbsp; <DD>&nbsp;
<DT><A HREF="./org/gcube/dataanalysis/ecoengine/test/ProduceTestMap.html#main2(java.lang.String[])"><B>main2(String[])</B></A> -
Static method in class org.gcube.dataanalysis.ecoengine.test.<A HREF="./org/gcube/dataanalysis/ecoengine/test/ProduceTestMap.html" title="class in org.gcube.dataanalysis.ecoengine.test">ProduceTestMap</A>
<DD>&nbsp;
<DT><A HREF="./org/gcube/dataanalysis/ecoengine/clustering/DBScan.html#mainCluster(java.lang.String[])"><B>mainCluster(String[])</B></A> - <DT><A HREF="./org/gcube/dataanalysis/ecoengine/clustering/DBScan.html#mainCluster(java.lang.String[])"><B>mainCluster(String[])</B></A> -
Static method in class org.gcube.dataanalysis.ecoengine.clustering.<A HREF="./org/gcube/dataanalysis/ecoengine/clustering/DBScan.html" title="class in org.gcube.dataanalysis.ecoengine.clustering">DBScan</A> Static method in class org.gcube.dataanalysis.ecoengine.clustering.<A HREF="./org/gcube/dataanalysis/ecoengine/clustering/DBScan.html" title="class in org.gcube.dataanalysis.ecoengine.clustering">DBScan</A>
<DD>&nbsp; <DD>&nbsp;
@ -6991,6 +7006,9 @@ Constructor for class org.gcube.dataanalysis.ecoengine.spatialdistributions.<A H
<DT><A HREF="./org/gcube/dataanalysis/ecoengine/test/checks/TestBayesianModels.html" title="class in org.gcube.dataanalysis.ecoengine.test.checks"><B>TestBayesianModels</B></A> - Class in <A HREF="./org/gcube/dataanalysis/ecoengine/test/checks/package-summary.html">org.gcube.dataanalysis.ecoengine.test.checks</A><DD>&nbsp;<DT><A HREF="./org/gcube/dataanalysis/ecoengine/test/checks/TestBayesianModels.html#TestBayesianModels()"><B>TestBayesianModels()</B></A> - <DT><A HREF="./org/gcube/dataanalysis/ecoengine/test/checks/TestBayesianModels.html" title="class in org.gcube.dataanalysis.ecoengine.test.checks"><B>TestBayesianModels</B></A> - Class in <A HREF="./org/gcube/dataanalysis/ecoengine/test/checks/package-summary.html">org.gcube.dataanalysis.ecoengine.test.checks</A><DD>&nbsp;<DT><A HREF="./org/gcube/dataanalysis/ecoengine/test/checks/TestBayesianModels.html#TestBayesianModels()"><B>TestBayesianModels()</B></A> -
Constructor for class org.gcube.dataanalysis.ecoengine.test.checks.<A HREF="./org/gcube/dataanalysis/ecoengine/test/checks/TestBayesianModels.html" title="class in org.gcube.dataanalysis.ecoengine.test.checks">TestBayesianModels</A> Constructor for class org.gcube.dataanalysis.ecoengine.test.checks.<A HREF="./org/gcube/dataanalysis/ecoengine/test/checks/TestBayesianModels.html" title="class in org.gcube.dataanalysis.ecoengine.test.checks">TestBayesianModels</A>
<DD>&nbsp; <DD>&nbsp;
<DT><A HREF="./org/gcube/dataanalysis/ecoengine/test/checks/TestBayesianModelsDBTest.html" title="class in org.gcube.dataanalysis.ecoengine.test.checks"><B>TestBayesianModelsDBTest</B></A> - Class in <A HREF="./org/gcube/dataanalysis/ecoengine/test/checks/package-summary.html">org.gcube.dataanalysis.ecoengine.test.checks</A><DD>&nbsp;<DT><A HREF="./org/gcube/dataanalysis/ecoengine/test/checks/TestBayesianModelsDBTest.html#TestBayesianModelsDBTest()"><B>TestBayesianModelsDBTest()</B></A> -
Constructor for class org.gcube.dataanalysis.ecoengine.test.checks.<A HREF="./org/gcube/dataanalysis/ecoengine/test/checks/TestBayesianModelsDBTest.html" title="class in org.gcube.dataanalysis.ecoengine.test.checks">TestBayesianModelsDBTest</A>
<DD>&nbsp;
<DT><A HREF="./org/gcube/dataanalysis/ecoengine/test/checks/TestBioClimateAnalysis.html" title="class in org.gcube.dataanalysis.ecoengine.test.checks"><B>TestBioClimateAnalysis</B></A> - Class in <A HREF="./org/gcube/dataanalysis/ecoengine/test/checks/package-summary.html">org.gcube.dataanalysis.ecoengine.test.checks</A><DD>&nbsp;<DT><A HREF="./org/gcube/dataanalysis/ecoengine/test/checks/TestBioClimateAnalysis.html#TestBioClimateAnalysis()"><B>TestBioClimateAnalysis()</B></A> - <DT><A HREF="./org/gcube/dataanalysis/ecoengine/test/checks/TestBioClimateAnalysis.html" title="class in org.gcube.dataanalysis.ecoengine.test.checks"><B>TestBioClimateAnalysis</B></A> - Class in <A HREF="./org/gcube/dataanalysis/ecoengine/test/checks/package-summary.html">org.gcube.dataanalysis.ecoengine.test.checks</A><DD>&nbsp;<DT><A HREF="./org/gcube/dataanalysis/ecoengine/test/checks/TestBioClimateAnalysis.html#TestBioClimateAnalysis()"><B>TestBioClimateAnalysis()</B></A> -
Constructor for class org.gcube.dataanalysis.ecoengine.test.checks.<A HREF="./org/gcube/dataanalysis/ecoengine/test/checks/TestBioClimateAnalysis.html" title="class in org.gcube.dataanalysis.ecoengine.test.checks">TestBioClimateAnalysis</A> Constructor for class org.gcube.dataanalysis.ecoengine.test.checks.<A HREF="./org/gcube/dataanalysis/ecoengine/test/checks/TestBioClimateAnalysis.html" title="class in org.gcube.dataanalysis.ecoengine.test.checks">TestBioClimateAnalysis</A>
<DD>&nbsp; <DD>&nbsp;
@ -7036,6 +7054,9 @@ Constructor for class org.gcube.dataanalysis.ecoengine.test.checks.<A HREF="./or
<DT><A HREF="./org/gcube/dataanalysis/ecoengine/test/checks/TestHSPECBioClimateAnalysisProd.html" title="class in org.gcube.dataanalysis.ecoengine.test.checks"><B>TestHSPECBioClimateAnalysisProd</B></A> - Class in <A HREF="./org/gcube/dataanalysis/ecoengine/test/checks/package-summary.html">org.gcube.dataanalysis.ecoengine.test.checks</A><DD>&nbsp;<DT><A HREF="./org/gcube/dataanalysis/ecoengine/test/checks/TestHSPECBioClimateAnalysisProd.html#TestHSPECBioClimateAnalysisProd()"><B>TestHSPECBioClimateAnalysisProd()</B></A> - <DT><A HREF="./org/gcube/dataanalysis/ecoengine/test/checks/TestHSPECBioClimateAnalysisProd.html" title="class in org.gcube.dataanalysis.ecoengine.test.checks"><B>TestHSPECBioClimateAnalysisProd</B></A> - Class in <A HREF="./org/gcube/dataanalysis/ecoengine/test/checks/package-summary.html">org.gcube.dataanalysis.ecoengine.test.checks</A><DD>&nbsp;<DT><A HREF="./org/gcube/dataanalysis/ecoengine/test/checks/TestHSPECBioClimateAnalysisProd.html#TestHSPECBioClimateAnalysisProd()"><B>TestHSPECBioClimateAnalysisProd()</B></A> -
Constructor for class org.gcube.dataanalysis.ecoengine.test.checks.<A HREF="./org/gcube/dataanalysis/ecoengine/test/checks/TestHSPECBioClimateAnalysisProd.html" title="class in org.gcube.dataanalysis.ecoengine.test.checks">TestHSPECBioClimateAnalysisProd</A> Constructor for class org.gcube.dataanalysis.ecoengine.test.checks.<A HREF="./org/gcube/dataanalysis/ecoengine/test/checks/TestHSPECBioClimateAnalysisProd.html" title="class in org.gcube.dataanalysis.ecoengine.test.checks">TestHSPECBioClimateAnalysisProd</A>
<DD>&nbsp; <DD>&nbsp;
<DT><A HREF="./org/gcube/dataanalysis/ecoengine/test/checks/TestMahoutComparison.html" title="class in org.gcube.dataanalysis.ecoengine.test.checks"><B>TestMahoutComparison</B></A> - Class in <A HREF="./org/gcube/dataanalysis/ecoengine/test/checks/package-summary.html">org.gcube.dataanalysis.ecoengine.test.checks</A><DD>&nbsp;<DT><A HREF="./org/gcube/dataanalysis/ecoengine/test/checks/TestMahoutComparison.html#TestMahoutComparison()"><B>TestMahoutComparison()</B></A> -
Constructor for class org.gcube.dataanalysis.ecoengine.test.checks.<A HREF="./org/gcube/dataanalysis/ecoengine/test/checks/TestMahoutComparison.html" title="class in org.gcube.dataanalysis.ecoengine.test.checks">TestMahoutComparison</A>
<DD>&nbsp;
<DT><A HREF="./org/gcube/dataanalysis/ecoengine/test/neuralnetwork/TestNN.html" title="class in org.gcube.dataanalysis.ecoengine.test.neuralnetwork"><B>TestNN</B></A> - Class in <A HREF="./org/gcube/dataanalysis/ecoengine/test/neuralnetwork/package-summary.html">org.gcube.dataanalysis.ecoengine.test.neuralnetwork</A><DD>&nbsp;<DT><A HREF="./org/gcube/dataanalysis/ecoengine/test/neuralnetwork/TestNN.html#TestNN()"><B>TestNN()</B></A> - <DT><A HREF="./org/gcube/dataanalysis/ecoengine/test/neuralnetwork/TestNN.html" title="class in org.gcube.dataanalysis.ecoengine.test.neuralnetwork"><B>TestNN</B></A> - Class in <A HREF="./org/gcube/dataanalysis/ecoengine/test/neuralnetwork/package-summary.html">org.gcube.dataanalysis.ecoengine.test.neuralnetwork</A><DD>&nbsp;<DT><A HREF="./org/gcube/dataanalysis/ecoengine/test/neuralnetwork/TestNN.html#TestNN()"><B>TestNN()</B></A> -
Constructor for class org.gcube.dataanalysis.ecoengine.test.neuralnetwork.<A HREF="./org/gcube/dataanalysis/ecoengine/test/neuralnetwork/TestNN.html" title="class in org.gcube.dataanalysis.ecoengine.test.neuralnetwork">TestNN</A> Constructor for class org.gcube.dataanalysis.ecoengine.test.neuralnetwork.<A HREF="./org/gcube/dataanalysis/ecoengine/test/neuralnetwork/TestNN.html" title="class in org.gcube.dataanalysis.ecoengine.test.neuralnetwork">TestNN</A>
<DD>&nbsp; <DD>&nbsp;

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ecological-engine 1.4.0-SNAPSHOT API ecological-engine 1.4.0-SNAPSHOT API

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<TITLE> <TITLE>
GenericDBExtractor (ecological-engine 1.4.0-SNAPSHOT API) GenericDBExtractor (ecological-engine 1.4.0-SNAPSHOT API)
</TITLE> </TITLE>
<META NAME="date" CONTENT="2012-10-22"> <META NAME="date" CONTENT="2012-10-31">
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<TITLE> <TITLE>
GenericStandaloneGraph (ecological-engine 1.4.0-SNAPSHOT API) GenericStandaloneGraph (ecological-engine 1.4.0-SNAPSHOT API)
</TITLE> </TITLE>
<META NAME="date" CONTENT="2012-10-22"> <META NAME="date" CONTENT="2012-10-31">
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SamplesTable (ecological-engine 1.4.0-SNAPSHOT API) SamplesTable (ecological-engine 1.4.0-SNAPSHOT API)
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<META NAME="date" CONTENT="2012-10-22"> <META NAME="date" CONTENT="2012-10-31">
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Uses of Interface org.gcube.contentmanagement.graphtools.abstracts.GenericDBExtractor (ecological-engine 1.4.0-SNAPSHOT API) Uses of Interface org.gcube.contentmanagement.graphtools.abstracts.GenericDBExtractor (ecological-engine 1.4.0-SNAPSHOT API)
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Uses of Class org.gcube.contentmanagement.graphtools.abstracts.GenericStandaloneGraph (ecological-engine 1.4.0-SNAPSHOT API) Uses of Class org.gcube.contentmanagement.graphtools.abstracts.GenericStandaloneGraph (ecological-engine 1.4.0-SNAPSHOT API)
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Uses of Class org.gcube.contentmanagement.graphtools.abstracts.SamplesTable (ecological-engine 1.4.0-SNAPSHOT API) Uses of Class org.gcube.contentmanagement.graphtools.abstracts.SamplesTable (ecological-engine 1.4.0-SNAPSHOT API)
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org.gcube.contentmanagement.graphtools.abstracts (ecological-engine 1.4.0-SNAPSHOT API) org.gcube.contentmanagement.graphtools.abstracts (ecological-engine 1.4.0-SNAPSHOT API)
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org.gcube.contentmanagement.graphtools.abstracts (ecological-engine 1.4.0-SNAPSHOT API) org.gcube.contentmanagement.graphtools.abstracts (ecological-engine 1.4.0-SNAPSHOT API)
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org.gcube.contentmanagement.graphtools.abstracts Class Hierarchy (ecological-engine 1.4.0-SNAPSHOT API) org.gcube.contentmanagement.graphtools.abstracts Class Hierarchy (ecological-engine 1.4.0-SNAPSHOT API)
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Uses of Class org.gcube.contentmanagement.graphtools.examples.ExampleExternalConfigPostGress (ecological-engine 1.4.0-SNAPSHOT API) Uses of Class org.gcube.contentmanagement.graphtools.examples.ExampleExternalConfigPostGress (ecological-engine 1.4.0-SNAPSHOT API)
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Uses of Class org.gcube.contentmanagement.graphtools.examples.ExampleExternalConfigPostGressProd (ecological-engine 1.4.0-SNAPSHOT API) Uses of Class org.gcube.contentmanagement.graphtools.examples.ExampleExternalConfigPostGressProd (ecological-engine 1.4.0-SNAPSHOT API)
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Uses of Class org.gcube.contentmanagement.graphtools.examples.ExampleFilters (ecological-engine 1.4.0-SNAPSHOT API) Uses of Class org.gcube.contentmanagement.graphtools.examples.ExampleFilters (ecological-engine 1.4.0-SNAPSHOT API)
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Uses of Class org.gcube.contentmanagement.graphtools.examples.ExampleFilters2 (ecological-engine 1.4.0-SNAPSHOT API) Uses of Class org.gcube.contentmanagement.graphtools.examples.ExampleFilters2 (ecological-engine 1.4.0-SNAPSHOT API)
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Uses of Class org.gcube.contentmanagement.graphtools.examples.ExampleMeanVariance (ecological-engine 1.4.0-SNAPSHOT API) Uses of Class org.gcube.contentmanagement.graphtools.examples.ExampleMeanVariance (ecological-engine 1.4.0-SNAPSHOT API)
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ExampleDataBuiltGraph (ecological-engine 1.4.0-SNAPSHOT API) ExampleDataBuiltGraph (ecological-engine 1.4.0-SNAPSHOT API)
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ExampleDerivative (ecological-engine 1.4.0-SNAPSHOT API) ExampleDerivative (ecological-engine 1.4.0-SNAPSHOT API)
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ExampleHistogram (ecological-engine 1.4.0-SNAPSHOT API) ExampleHistogram (ecological-engine 1.4.0-SNAPSHOT API)
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ExampleImage (ecological-engine 1.4.0-SNAPSHOT API) ExampleImage (ecological-engine 1.4.0-SNAPSHOT API)
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ExampleLines (ecological-engine 1.4.0-SNAPSHOT API) ExampleLines (ecological-engine 1.4.0-SNAPSHOT API)
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ExampleNormalDistribution (ecological-engine 1.4.0-SNAPSHOT API) ExampleNormalDistribution (ecological-engine 1.4.0-SNAPSHOT API)
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ExampleNumericSeries (ecological-engine 1.4.0-SNAPSHOT API) ExampleNumericSeries (ecological-engine 1.4.0-SNAPSHOT API)
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ExamplePie (ecological-engine 1.4.0-SNAPSHOT API) ExamplePie (ecological-engine 1.4.0-SNAPSHOT API)
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ExampleRadar (ecological-engine 1.4.0-SNAPSHOT API) ExampleRadar (ecological-engine 1.4.0-SNAPSHOT API)
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ExampleScatter (ecological-engine 1.4.0-SNAPSHOT API) ExampleScatter (ecological-engine 1.4.0-SNAPSHOT API)
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