diff --git a/src/main/java/org/gcube/dataanalysis/ecoengine/clustering/DBScan.java b/src/main/java/org/gcube/dataanalysis/ecoengine/clustering/DBScan.java index d099071..59e06d5 100644 --- a/src/main/java/org/gcube/dataanalysis/ecoengine/clustering/DBScan.java +++ b/src/main/java/org/gcube/dataanalysis/ecoengine/clustering/DBScan.java @@ -164,6 +164,7 @@ public class DBScan implements Clusterer{ return INFRASTRUCTURE.LOCAL; } + long t00; @Override public void init() throws Exception { status = 0; @@ -220,6 +221,7 @@ public class DBScan implements Clusterer{ } protected void getSamples() throws Exception{ + t00=System.currentTimeMillis(); // System.out.println("->"+DatabaseUtils.getColumnsElementsStatement(OccurrencePointsTable, FeaturesColumnNames, "")); FeaturesColumnNames=FeaturesColumnNames.replace(AlgorithmConfiguration.listSeparator, ","); List samples = DatabaseFactory.executeSQLQuery(DatabaseUtils.getColumnsElementsStatement(OccurrencePointsTable, FeaturesColumnNames, ""), dbHibConnection); @@ -281,7 +283,7 @@ public class DBScan implements Clusterer{ long ti= System.currentTimeMillis(); IOContainer output = clusterer.apply(innerInput); AnalysisLogger.getLogger().debug("DBScan: ...ELAPSED CLUSTERING TIME: "+(System.currentTimeMillis()-ti)); - AnalysisLogger.getLogger().debug("DBScan: ...Clustering Finished"); + AnalysisLogger.getLogger().debug("DBScan: ...Clustering Finished in "+(System.currentTimeMillis()-t00)); status = 70f; IOObject[] outputvector = output.getIOObjects(); diff --git a/src/main/java/org/gcube/dataanalysis/ecoengine/clustering/KMeans.java b/src/main/java/org/gcube/dataanalysis/ecoengine/clustering/KMeans.java index e39d4aa..71de928 100644 --- a/src/main/java/org/gcube/dataanalysis/ecoengine/clustering/KMeans.java +++ b/src/main/java/org/gcube/dataanalysis/ecoengine/clustering/KMeans.java @@ -74,7 +74,7 @@ public class KMeans extends DBScan{ @Override public void compute() throws Exception { - + try{ if ((config==null)||kk==null||maxRuns==null||maxOptimizations==null){ throw new Exception("KMeans: Error incomplete parameters"); } @@ -103,9 +103,13 @@ public class KMeans extends DBScan{ IOObject[] outputvector = output.getIOObjects(); BuildClusterTable(outputvector); - - shutdown(); - status = 100f; + }catch(Exception e){ + throw e; + } + finally{ + shutdown(); + status = 100f; + } } diff --git a/src/main/java/org/gcube/dataanalysis/ecoengine/clustering/XMeansWrapper.java b/src/main/java/org/gcube/dataanalysis/ecoengine/clustering/XMeansWrapper.java index bed1222..646513f 100644 --- a/src/main/java/org/gcube/dataanalysis/ecoengine/clustering/XMeansWrapper.java +++ b/src/main/java/org/gcube/dataanalysis/ecoengine/clustering/XMeansWrapper.java @@ -164,7 +164,7 @@ public class XMeansWrapper extends DBScan { @Override public void compute() throws Exception { - + try{ if ((config == null) || maxIterations == null || minClusters == null || maxClusters == null) { throw new Exception("XMeans: Error incomplete parameters"); } @@ -228,9 +228,13 @@ public class XMeansWrapper extends DBScan { } else AnalysisLogger.getLogger().debug("XMeans: Warning - Empty Training Set"); - - shutdown(); - status = 100f; + }catch(Exception e){ + throw e; + } + finally{ + shutdown(); + status = 100f; + } } protected void BuildClusterTable(int[] clusteringAssignments, int[] counters) throws Exception { diff --git a/src/main/java/org/gcube/dataanalysis/ecoengine/evaluation/bioclimate/BioClimateAnalysis.java b/src/main/java/org/gcube/dataanalysis/ecoengine/evaluation/bioclimate/BioClimateAnalysis.java index da9921f..d699152 100644 --- a/src/main/java/org/gcube/dataanalysis/ecoengine/evaluation/bioclimate/BioClimateAnalysis.java +++ b/src/main/java/org/gcube/dataanalysis/ecoengine/evaluation/bioclimate/BioClimateAnalysis.java @@ -337,7 +337,9 @@ public class BioClimateAnalysis { throw e; } finally { status = 100f; + try{ referencedbConnection.close(); + }catch(Exception e){} } } @@ -643,7 +645,9 @@ public class BioClimateAnalysis { throw e; } finally { status = 100f; + try{ referencedbConnection.close(); + }catch(Exception e2){} } } diff --git a/src/main/java/org/gcube/dataanalysis/ecoengine/evaluation/bioclimate/InterpolateTables.java b/src/main/java/org/gcube/dataanalysis/ecoengine/evaluation/bioclimate/InterpolateTables.java index 0d6101b..1266c99 100644 --- a/src/main/java/org/gcube/dataanalysis/ecoengine/evaluation/bioclimate/InterpolateTables.java +++ b/src/main/java/org/gcube/dataanalysis/ecoengine/evaluation/bioclimate/InterpolateTables.java @@ -171,7 +171,9 @@ public class InterpolateTables { } finally { // close connections if (referencedbConnection!=null) + try{ referencedbConnection.close(); + }catch(Exception e){} status = 100f; } } diff --git a/src/main/java/org/gcube/dataanalysis/ecoengine/interfaces/DataAnalysis.java b/src/main/java/org/gcube/dataanalysis/ecoengine/interfaces/DataAnalysis.java index 000eb0d..05dfb4a 100644 --- a/src/main/java/org/gcube/dataanalysis/ecoengine/interfaces/DataAnalysis.java +++ b/src/main/java/org/gcube/dataanalysis/ecoengine/interfaces/DataAnalysis.java @@ -40,12 +40,13 @@ public abstract class DataAnalysis implements Evaluator{ out = new HashMap(); try{ out = analyze(); - shutdown(); + }catch(Exception e){ e.printStackTrace(); throw e; } finally{ + shutdown(); status = 100; } @@ -118,8 +119,10 @@ public abstract class DataAnalysis implements Evaluator{ public void shutdown() { try { - connection.close(); + AnalysisLogger.getLogger().debug("Closing DB connections"); + connection.close(); } catch (Exception e) { + AnalysisLogger.getLogger().debug("Error in closing DB connections "+e.getLocalizedMessage()); } } diff --git a/src/main/java/org/gcube/dataanalysis/ecoengine/models/FeedForwardNN.java b/src/main/java/org/gcube/dataanalysis/ecoengine/models/FeedForwardNN.java index 8d7824e..1720bc7 100644 --- a/src/main/java/org/gcube/dataanalysis/ecoengine/models/FeedForwardNN.java +++ b/src/main/java/org/gcube/dataanalysis/ecoengine/models/FeedForwardNN.java @@ -200,6 +200,7 @@ public class FeedForwardNN extends ModelAquamapsNN{ e.printStackTrace(); AnalysisLogger.getLogger().error("ERROR during training"); } + status = 100f; } diff --git a/src/main/java/org/gcube/dataanalysis/ecoengine/models/ModelAquamapsNN.java b/src/main/java/org/gcube/dataanalysis/ecoengine/models/ModelAquamapsNN.java index 2ae9710..c024d77 100644 --- a/src/main/java/org/gcube/dataanalysis/ecoengine/models/ModelAquamapsNN.java +++ b/src/main/java/org/gcube/dataanalysis/ecoengine/models/ModelAquamapsNN.java @@ -153,7 +153,12 @@ public class ModelAquamapsNN implements Model { @Override public void postprocess(AlgorithmConfiguration Input, Model previousModel) { - connection.close(); + AnalysisLogger.getLogger().debug("Closing DB Connection"); + try{ + connection.close(); + }catch(Exception e){ + AnalysisLogger.getLogger().debug("Error in Closing DB Connection "+e.getLocalizedMessage()); + } } // private String takeElementsQuery = "select depthmean,depthmax,depthmin, sstanmean,sbtanmean,salinitymean,salinitybmean, primprodmean,iceconann,landdist,oceanarea,centerlat,centerlong from %1$s d where oceanarea>0 limit 100"; diff --git a/src/main/java/org/gcube/dataanalysis/ecoengine/processing/LocalSplitGenerator.java b/src/main/java/org/gcube/dataanalysis/ecoengine/processing/LocalSplitGenerator.java index 36cc718..04b4d86 100644 --- a/src/main/java/org/gcube/dataanalysis/ecoengine/processing/LocalSplitGenerator.java +++ b/src/main/java/org/gcube/dataanalysis/ecoengine/processing/LocalSplitGenerator.java @@ -220,8 +220,9 @@ public class LocalSplitGenerator implements Generator { } } AnalysisLogger.getLogger().trace("CLOSING CONNECTIONS"); + try{ dbHibConnection.close(); - + }catch(Exception eee){} } // waits for thread to be free diff --git a/src/main/java/org/gcube/dataanalysis/ecoengine/spatialdistributions/BayesianDistribution.java b/src/main/java/org/gcube/dataanalysis/ecoengine/spatialdistributions/BayesianDistribution.java index 6529d85..396182c 100644 --- a/src/main/java/org/gcube/dataanalysis/ecoengine/spatialdistributions/BayesianDistribution.java +++ b/src/main/java/org/gcube/dataanalysis/ecoengine/spatialdistributions/BayesianDistribution.java @@ -140,7 +140,7 @@ public abstract class BayesianDistribution implements SpatialProbabilityDistribu @Override public void postProcess() { status = 100f; - if (dbConnection==null){ + if (dbConnection!=null){ dbConnection.close(); } } diff --git a/src/main/java/org/gcube/dataanalysis/ecoengine/test/ProduceTestMap.java b/src/main/java/org/gcube/dataanalysis/ecoengine/test/ProduceTestMap.java index ea88829..6e0d07c 100644 --- a/src/main/java/org/gcube/dataanalysis/ecoengine/test/ProduceTestMap.java +++ b/src/main/java/org/gcube/dataanalysis/ecoengine/test/ProduceTestMap.java @@ -5,7 +5,32 @@ import org.gcube.dataanalysis.ecoengine.user.ModelerT; public class ProduceTestMap { + public static void main2(String[] args) throws Exception { + StringBuffer create = new StringBuffer("CREATE TABLE mahoutclustering("+System.getProperty("line.separator")); + int max =60; + for (int i=0;i clus = ClusterersFactory.getClusterers(testConfigLocal()); + List clus = ClusterersFactory.getClusterers(testConfigLocal2()); clus .get(0).init(); cluster(clus .get(0)); clus = null; @@ -65,9 +65,9 @@ public class TestClusterer { AlgorithmConfiguration config = new AlgorithmConfiguration(); config.setConfigPath("./cfg/"); config.setPersistencePath("./"); - config.setParam("OccurrencePointsTable","occurrence_species_id5397d3c4_a7eb_4227_adb4_d9d7d36e8b21"); + config.setParam("OccurrencePointsTable","mahoutclustering"); config.setParam("FeaturesColumnNames","recordedby#basisofrecord#locality"); - config.setParam("OccurrencePointsClusterTable","occCluster_gp"); + config.setParam("OccurrencePointsClusterTable","occCluster_mahout"); config.setParam("epsilon","10"); config.setParam("min_points","1"); @@ -84,4 +84,32 @@ public class TestClusterer { return config; } + + private static AlgorithmConfiguration testConfigLocal2() { + + AlgorithmConfiguration config = new AlgorithmConfiguration(); + config.setConfigPath("./cfg/"); + config.setPersistencePath("./"); + config.setParam("OccurrencePointsTable","generic_idbff59a4c_cada_4447_96b1_5d9a67f89fe8"); + config.setParam("FeaturesColumnNames","x#y"); + config.setParam("OccurrencePointsClusterTable","occCluster_nafo"); + config.setParam("k","10"); + config.setParam("max_runs","300"); + config.setParam("max_optimization_steps","1"); + config.setParam("min_points","1"); + + config.setConfigPath("./cfg/"); + config.setPersistencePath("./"); + config.setNumberOfResources(1); + config.setAgent("KMEANS"); + + /* + config.setParam("DatabaseUserName","utente"); + config.setParam("DatabasePassword","d4science"); + config.setParam("DatabaseURL","jdbc:postgresql://dbtest.next.research-infrastructures.eu/testdb"); + config.setParam("DatabaseDriver","org.postgresql.Driver"); + */ + return config; + } + } diff --git a/src/main/java/org/gcube/dataanalysis/ecoengine/test/checks/TestDBNEXTEvaluators.java b/src/main/java/org/gcube/dataanalysis/ecoengine/test/checks/TestDBNEXTEvaluators.java index dad2d23..b5baa55 100644 --- a/src/main/java/org/gcube/dataanalysis/ecoengine/test/checks/TestDBNEXTEvaluators.java +++ b/src/main/java/org/gcube/dataanalysis/ecoengine/test/checks/TestDBNEXTEvaluators.java @@ -57,7 +57,7 @@ public static void main(String[] args) throws Exception { */ // List trans = null; // trans = EvaluatorsFactory.getEvaluators(testConfigLocal12()); - List trans = TransducerersFactory.getTransducerers(testConfigLocal4()); + List trans = TransducerersFactory.getTransducerers(testConfigLocal5c()); trans.get(0).init(); Regressor.process(trans.get(0)); @@ -136,16 +136,94 @@ public static void main(String[] args) throws Exception { config.setParam("scientificNameColumn", "scientificname"); config.setParam("eventDateColumn", "eventdate"); config.setParam("lastModificationColumn", "modified"); - config.setParam("rightTableName", "occurrencetestduplicates2"); - config.setParam("leftTableName", "occurrencetestduplicates"); +// config.setParam("rightTableName", "occurrencetestduplicates2"); +// config.setParam("leftTableName", "occurrencetestduplicates"); + config.setParam("rightTableName", "occurrence_species_id7a77d613_c21d_495d_8a04_b9534cf5e159"); + config.setParam("leftTableName", "processedoccurrences_id_6d416554_7a06_422f_8f4c_a65051025221"); + + config.setParam("finalTableName", "occurrencesmerged"); config.setParam("spatialTolerance", "0.5"); config.setParam("confidence", "90"); + config.setParam("DatabaseUserName","utente"); + config.setParam("DatabasePassword","d4science"); + config.setParam("DatabaseURL","jdbc:postgresql://dbtest.research-infrastructures.eu/testdb"); + config.setParam("DatabaseDriver","org.postgresql.Driver"); + return config; } + private static AlgorithmConfiguration testConfigLocal5b() { + + AlgorithmConfiguration config = Regressor.getConfig(); + config.setAgent("OCCURRENCES_SUBTRACTION"); + + config.setParam("longitudeColumn", "decimallongitude"); + config.setParam("latitudeColumn", "decimallatitude"); + config.setParam("recordedByColumn", "recordedby"); + config.setParam("scientificNameColumn", "scientificname"); + config.setParam("eventDateColumn", "eventdate"); + config.setParam("lastModificationColumn", "modified"); + /* + config.setParam("rightTableName", "occurrence_species2"); + config.setParam("leftTableName", "occurrence_species1"); + */ + /* + config.setParam("rightTableName", "occurrence_species_id1e8f7b48_b99a_48a3_8b52_89976fd79cd4"); + config.setParam("leftTableName", "occurrence_species_id0045886b_2a7c_4ede_afc4_3157c694b893"); + */ + config.setParam("rightTableName", "occurrence_species_id7a77d613_c21d_495d_8a04_b9534cf5e159"); + config.setParam("leftTableName", "occurrence_species_idbb2931ef_af2c_495a_ad5f_4ef81ad16159"); + + config.setParam("finalTableName", "occurrencessubtracted2"); + config.setParam("spatialTolerance", "0.000001"); + config.setParam("confidence", "90"); + + config.setParam("DatabaseUserName","utente"); + config.setParam("DatabasePassword","d4science"); + config.setParam("DatabaseURL","jdbc:postgresql://dbtest.research-infrastructures.eu/testdb"); + config.setParam("DatabaseDriver","org.postgresql.Driver"); + + return config; + } + + + private static AlgorithmConfiguration testConfigLocal5c() { + + AlgorithmConfiguration config = Regressor.getConfig(); + config.setAgent("OCCURRENCES_INTERSECTOR"); + + config.setParam("longitudeColumn", "decimallongitude"); + config.setParam("latitudeColumn", "decimallatitude"); + config.setParam("recordedByColumn", "recordedby"); + config.setParam("scientificNameColumn", "scientificname"); + config.setParam("eventDateColumn", "eventdate"); + config.setParam("lastModificationColumn", "modified"); + /* + config.setParam("rightTableName", "occurrence_species2"); + config.setParam("leftTableName", "occurrence_species1"); + */ + /* + config.setParam("rightTableName", "occurrence_species_id1e8f7b48_b99a_48a3_8b52_89976fd79cd4"); + config.setParam("leftTableName", "occurrence_species_id0045886b_2a7c_4ede_afc4_3157c694b893"); + */ + config.setParam("leftTableName", "occurrence_species_idbb2931ef_af2c_495a_ad5f_4ef81ad16159"); + config.setParam("rightTableName", "occurrence_species_id7a77d613_c21d_495d_8a04_b9534cf5e159"); + + config.setParam("finalTableName", "occurrencesintersected"); + config.setParam("spatialTolerance", "0.000001"); + config.setParam("confidence", "90"); + + config.setParam("DatabaseUserName","utente"); + config.setParam("DatabasePassword","d4science"); + config.setParam("DatabaseURL","jdbc:postgresql://dbtest.research-infrastructures.eu/testdb"); + config.setParam("DatabaseDriver","org.postgresql.Driver"); + + return config; + } + private static AlgorithmConfiguration testConfigLocal6() { AlgorithmConfiguration config = Regressor.getConfig(); diff --git a/src/main/java/org/gcube/dataanalysis/ecoengine/test/checks/TestMahoutComparison.java b/src/main/java/org/gcube/dataanalysis/ecoengine/test/checks/TestMahoutComparison.java new file mode 100644 index 0000000..ee832bd --- /dev/null +++ b/src/main/java/org/gcube/dataanalysis/ecoengine/test/checks/TestMahoutComparison.java @@ -0,0 +1,112 @@ +package org.gcube.dataanalysis.ecoengine.test.checks; + +import java.util.HashMap; +import java.util.List; + +import org.gcube.dataanalysis.ecoengine.configuration.AlgorithmConfiguration; +import org.gcube.dataanalysis.ecoengine.datatypes.InputTable; +import org.gcube.dataanalysis.ecoengine.datatypes.PrimitiveType; +import org.gcube.dataanalysis.ecoengine.datatypes.StatisticalType; +import org.gcube.dataanalysis.ecoengine.datatypes.enumtypes.PrimitiveTypes; +import org.gcube.dataanalysis.ecoengine.evaluation.DiscrepancyAnalysis; +import org.gcube.dataanalysis.ecoengine.evaluation.bioclimate.InterpolateTables.INTERPOLATIONFUNCTIONS; +import org.gcube.dataanalysis.ecoengine.interfaces.Clusterer; +import org.gcube.dataanalysis.ecoengine.interfaces.Evaluator; +import org.gcube.dataanalysis.ecoengine.interfaces.Transducerer; +import org.gcube.dataanalysis.ecoengine.processing.factories.ClusterersFactory; +import org.gcube.dataanalysis.ecoengine.processing.factories.EvaluatorsFactory; +import org.gcube.dataanalysis.ecoengine.processing.factories.TransducerersFactory; +import org.gcube.dataanalysis.ecoengine.test.regression.Regressor; + +public class TestMahoutComparison { + +public static void main(String[] args) throws Exception { + + System.out.println("TEST 1"); + + /* + trans = TransducerersFactory.getTransducerers(testConfigLocal()); + trans.get(0).init(); + Regressor.process(trans.get(0)); + trans = null; + + trans = TransducerersFactory.getTransducerers(testConfigLocal2()); + trans.get(0).init(); + Regressor.process(trans.get(0)); + trans = null; + + trans = TransducerersFactory.getTransducerers(testConfigLocal3()); + trans.get(0).init(); + Regressor.process(trans.get(0)); + trans = null; + + trans = TransducerersFactory.getTransducerers(testConfigLocal4()); + trans.get(0).init(); + Regressor.process(trans.get(0)); + trans = null; + */ + + /* + trans = TransducerersFactory.getTransducerers(testConfigLocal8()); + trans.get(0).init(); + Regressor.process(trans.get(0)); + trans = null; + + trans = TransducerersFactory.getTransducerers(testConfigLocal6()); + trans.get(0).init(); + Regressor.process(trans.get(0)); + trans = null; + */ +// List trans = null; +// trans = EvaluatorsFactory.getEvaluators(testConfigLocal12()); + List trans = ClusterersFactory.getClusterers(testConfigLocal2()); + trans.get(0).init(); + Regressor.process(trans.get(0)); + +// PrimitiveType output = (PrimitiveType) trans.get(0).getOutput(); +// HashMap out = (HashMap)output.getContent(); +// DiscrepancyAnalysis.visualizeResults(out); + + StatisticalType output = trans.get(0).getOutput(); + + + trans = null; + +} + + + private static AlgorithmConfiguration testConfigLocal() { + + AlgorithmConfiguration config = Regressor.getConfig(); + config.setNumberOfResources(1); + config.setAgent("DBSCAN"); + + config.setParam("OccurrencePointsTable","mahoutclustering"); + config.setParam("FeaturesColumnNames","field0#field1#field2#field3#field4#field5#field6#field7#field8#field9#field10#field11#field12#field13#field14#field15#field16#field17#field18#field19#field20#field21#field22#field23#field24#field25#field26#field27#field28#field29#field30#field31#field32#field33#field34#field35#field36#field37#field38#field39#field40#field41#field42#field43#field44#field45#field46#field47#field48#field49#field50#field51#field52#field53#field54#field55#field56#field57#field58#field59"); + config.setParam("OccurrencePointsClusterTable","occCluster_mahout"); + config.setParam("epsilon","10"); + config.setParam("min_points","1"); + + + return config; + } + + private static AlgorithmConfiguration testConfigLocal2() { + + AlgorithmConfiguration config = Regressor.getConfig(); + config.setNumberOfResources(1); + config.setAgent("KMEANS"); + config.setParam("OccurrencePointsTable","mahoutclustering"); + config.setParam("FeaturesColumnNames","field0#field1#field2#field3#field4#field5#field6#field7#field8#field9#field10#field11#field12#field13#field14#field15#field16#field17#field18#field19#field20#field21#field22#field23#field24#field25#field26#field27#field28#field29#field30#field31#field32#field33#field34#field35#field36#field37#field38#field39#field40#field41#field42#field43#field44#field45#field46#field47#field48#field49#field50#field51#field52#field53#field54#field55#field56#field57#field58#field59"); + config.setParam("OccurrencePointsClusterTable","occCluster_mahout"); + + config.setParam("k","20"); + config.setParam("max_runs","10"); + config.setParam("max_optimization_steps","1"); + config.setParam("min_points","1"); + + + return config; + } + +} diff --git a/src/main/java/org/gcube/dataanalysis/ecoengine/transducers/OccurrencePointsInSeaOnEarth.java b/src/main/java/org/gcube/dataanalysis/ecoengine/transducers/OccurrencePointsInSeaOnEarth.java index 04d1fc5..b6a27a6 100644 --- a/src/main/java/org/gcube/dataanalysis/ecoengine/transducers/OccurrencePointsInSeaOnEarth.java +++ b/src/main/java/org/gcube/dataanalysis/ecoengine/transducers/OccurrencePointsInSeaOnEarth.java @@ -107,7 +107,9 @@ public class OccurrencePointsInSeaOnEarth extends OccurrencePointsMerger{ throw e; } finally { if (dbconnection != null) + try{ dbconnection.close(); + }catch(Exception e2){} status = 100; AnalysisLogger.getLogger().trace("Occ Points Processing Finished and db closed"); } diff --git a/src/main/java/org/gcube/dataanalysis/ecoengine/transducers/OccurrencePointsIntersector.java b/src/main/java/org/gcube/dataanalysis/ecoengine/transducers/OccurrencePointsIntersector.java index 9009b91..b3bb74f 100644 --- a/src/main/java/org/gcube/dataanalysis/ecoengine/transducers/OccurrencePointsIntersector.java +++ b/src/main/java/org/gcube/dataanalysis/ecoengine/transducers/OccurrencePointsIntersector.java @@ -8,7 +8,7 @@ import org.gcube.dataanalysis.ecoengine.utils.DatabaseUtils; public class OccurrencePointsIntersector extends OccurrencePointsMerger{ public OccurrencePointsIntersector(){ - + firstbest=false; } @Override diff --git a/src/main/java/org/gcube/dataanalysis/ecoengine/transducers/OccurrencePointsMerger.java b/src/main/java/org/gcube/dataanalysis/ecoengine/transducers/OccurrencePointsMerger.java index 87938ff..8afc189 100644 --- a/src/main/java/org/gcube/dataanalysis/ecoengine/transducers/OccurrencePointsMerger.java +++ b/src/main/java/org/gcube/dataanalysis/ecoengine/transducers/OccurrencePointsMerger.java @@ -42,7 +42,8 @@ public class OccurrencePointsMerger implements Transducerer { static String finalTableNameF = "finalTableName"; static String spatialTolerance = "spatialTolerance"; static String confidence = "confidence"; - + static String sqlDateFormat="MM/DD/YYYY HH24:MI:SS"; + static String javaDateFormat="MM/dd/yyyy HH:mm:ss"; protected List records_left; protected List records_right; @@ -66,10 +67,10 @@ public class OccurrencePointsMerger implements Transducerer { protected List columnsNames; protected SessionFactory dbconnection; protected float status; - + protected boolean firstbest; public OccurrencePointsMerger(){ - + firstbest=true; } protected class OccurrenceRecord { @@ -80,9 +81,10 @@ public class OccurrencePointsMerger implements Transducerer { public Calendar modifdate; // public String locality; // public String country; - public float x; - public float y; - + public double x; + public double y; + public String x$; + public String y$; // Map metadata; public List otherValues; @@ -94,7 +96,7 @@ public class OccurrencePointsMerger implements Transducerer { public static String convert2conventionalFormat(Calendar date) { if (date == null) return ""; - SimpleDateFormat formatter = new SimpleDateFormat("MM/dd/yy KK:mm:ss a"); + SimpleDateFormat formatter = new SimpleDateFormat(javaDateFormat); String formattedDate = formatter.format(new Date(date.getTimeInMillis())); return formattedDate; } @@ -109,9 +111,11 @@ public class OccurrencePointsMerger implements Transducerer { String name$ = "" + name; String value$ = "" + row[index]; if (name$.equalsIgnoreCase(lonFld)) { - record.x = Float.parseFloat(value$); + record.x = Double.parseDouble(value$); + record.x$ = value$; } else if (name$.equalsIgnoreCase(latFld)) { - record.y = Float.parseFloat(value$); + record.y = Double.parseDouble(value$); + record.y$ = value$; } else if (name$.equalsIgnoreCase(recordedByFld)) { record.recordedby = value$; } else if (name$.equalsIgnoreCase(scientificNameFld)) { @@ -151,9 +155,9 @@ public class OccurrencePointsMerger implements Transducerer { String name$ = "" + name; String value$ = "NULL"; if (name$.equalsIgnoreCase(lonFld)) { - value$ = "'" + record.x + "'"; + value$ = "'" + record.x$ + "'"; } else if (name$.equalsIgnoreCase(latFld)) { - value$ = "'" + record.y + "'"; + value$ = "'" + record.y$ + "'"; } else if (name$.equalsIgnoreCase(recordedByFld)) { if (record.recordedby != null) value$ = "'" + record.recordedby.replace("'", "") + "'"; @@ -376,15 +380,16 @@ public class OccurrencePointsMerger implements Transducerer { for (OccurrenceRecord record : objectstodelete) { String rec = recordedByFld + "='" + record.recordedby.replace("'","")+"'"; String sci = scientificNameFld + "='" + record.scientificName.replace("'","")+"'"; - String x = lonFld + "='" + record.x+"'"; - String y = latFld + "='" + record.y+"'"; + String x = lonFld + "='" + record.x$+"'"; + String y = latFld + "='" + record.y$+"'"; String event = null; String modified = null; if (record.eventdate!=null) - event = eventDatFld + "='" + convert2conventionalFormat(record.eventdate)+"'"; + //to_timestamp('09/30/56 11:00:00 PM', 'MM/DD/YY HH12:MI:SS a') + event = eventDatFld + "=to_timestamp('" + convert2conventionalFormat(record.eventdate)+"','"+sqlDateFormat+"')"; if (record.modifdate!=null) - modified = modifDatFld + "='" + convert2conventionalFormat(record.modifdate)+"'"; + modified = modifDatFld + "=to_timestamp('" + convert2conventionalFormat(record.modifdate)+"','"+sqlDateFormat+"')"; buffer.append("("); buffer.append(rec + " AND " + sci + " AND " + x + " AND " + y); @@ -401,7 +406,7 @@ public class OccurrencePointsMerger implements Transducerer { } String updateQ = DatabaseUtils.deleteFromBuffer(finalTableName, buffer); -// System.out.println("Update:\n"+updateQ); +// AnalysisLogger.getLogger().debug("Update:\n"+updateQ); DatabaseFactory.executeSQLUpdate(updateQ, dbconnection); AnalysisLogger.getLogger().debug("Objects deleted"); } @@ -422,12 +427,17 @@ public class OccurrencePointsMerger implements Transducerer { } String updateQ = DatabaseUtils.insertFromBuffer(finalTableName, columns.toString(), buffer); - System.out.println("Update:\n"+updateQ); - AnalysisLogger.getLogger().debug("Update:\n"+updateQ); +// System.out.println("Update:\n"+updateQ); +// AnalysisLogger.getLogger().debug("Update:\n"+updateQ); DatabaseFactory.executeSQLUpdate(updateQ, dbconnection); AnalysisLogger.getLogger().debug("Objects inserted"); } - + + objectstoinsert = null; + objectstodelete= null; + objectstoinsert = new ArrayList(); + objectstodelete = new ArrayList(); + System.gc(); } protected void prepareFinalTable() throws Exception{ DatabaseFactory.executeSQLUpdate(DatabaseUtils.duplicateTableStatement(leftTableName, finalTableName), dbconnection); @@ -489,6 +499,7 @@ public class OccurrencePointsMerger implements Transducerer { for (Object lRow : leftRows) { OccurrenceRecord leftOcc = null; // only for the first iteration on the left occurrences perform the transformation + /* if (leftrecordsSize <= k) { // transform into an occurrence object leftOcc = row2OccurrenceRecord((Object[]) lRow); @@ -497,7 +508,8 @@ public class OccurrencePointsMerger implements Transducerer { // System.out.println("ADDED "+k+"-th elements size: "+leftRecords.size()); } else leftOcc = leftRecords.get(k); - + */ + leftOcc = row2OccurrenceRecord((Object[]) lRow); // evaluate P(dx,sx) p = extProb(leftOcc, rightOcc); @@ -505,18 +517,32 @@ public class OccurrencePointsMerger implements Transducerer { bestleftOcc = leftOcc; found = true; similaritiesCounter++; - AnalysisLogger.getLogger().trace("Found a similarity with P=" + p + " between (" + "\"" + leftOcc.scientificName + "\"" + "," + leftOcc.x + "\"" + "," + "\"" + leftOcc.y + "\"" + "," + "\"" + leftOcc.recordedby + "\"" + "," + "\"" + convert2conventionalFormat(leftOcc.eventdate) + "\"" + ") VS " + "(" + "\"" + rightOcc.scientificName + "\"" + "," + "\"" + rightOcc.x + "\"" + "," + "\"" + rightOcc.y + "\"" + "," + "\"" + rightOcc.recordedby + "\"" + "," + "\"" + convert2conventionalFormat(rightOcc.eventdate) + "\"" + ")"); - break; + AnalysisLogger.getLogger().trace("Found a similarity with P=" + p + " between (" + "\"" + leftOcc.scientificName + "\"" + ",\"" + leftOcc.x + "\"" + "," + "\"" + leftOcc.y + "\"" + "," + "\"" + leftOcc.recordedby + "\"" + "," + "\"" + convert2conventionalFormat(leftOcc.eventdate) + "\"" + ") VS " + "(" + "\"" + rightOcc.scientificName + "\"" + "," + "\"" + rightOcc.x + "\"" + "," + "\"" + rightOcc.y + "\"" + "," + "\"" + rightOcc.recordedby + "\"" + "," + "\"" + convert2conventionalFormat(rightOcc.eventdate) + "\"" + ")"); +// break; + if (!firstbest) + manageHighProbability(p, bestleftOcc, rightOcc); + else + break; } + else if (!firstbest) + manageLowProbability(p, bestleftOcc, rightOcc); k++; } rightCounter++; - if (found) - manageHighProbability(p, bestleftOcc, rightOcc); - else - manageLowProbability(p, bestleftOcc, rightOcc); - + + if (firstbest){ + if (found) + manageHighProbability(p, bestleftOcc, rightOcc); + else + manageLowProbability(p, bestleftOcc, rightOcc); + } + status = Math.min(90, 10f + (80 * ((float) rightCounter) / ((float) allrightrows))); + + if (rightCounter%500==0){ + AnalysisLogger.getLogger().trace("Persisting ... "+rightCounter+" over "+allrightrows); + persist(); + } } AnalysisLogger.getLogger().trace("Found " + similaritiesCounter + " similarities on " + rightCounter + " elements"); @@ -528,7 +554,9 @@ public class OccurrencePointsMerger implements Transducerer { throw e; } finally { if (dbconnection != null) + try{ dbconnection.close(); + }catch(Exception e){} status = 100; AnalysisLogger.getLogger().trace("Occ Points Processing Finished and db closed"); } diff --git a/src/main/java/org/gcube/dataanalysis/ecoengine/transducers/OccurrencePointsSubtraction.java b/src/main/java/org/gcube/dataanalysis/ecoengine/transducers/OccurrencePointsSubtraction.java new file mode 100644 index 0000000..484ab47 --- /dev/null +++ b/src/main/java/org/gcube/dataanalysis/ecoengine/transducers/OccurrencePointsSubtraction.java @@ -0,0 +1,25 @@ +package org.gcube.dataanalysis.ecoengine.transducers; + +public class OccurrencePointsSubtraction extends OccurrencePointsMerger{ + + public OccurrencePointsSubtraction(){ + firstbest=false; + } + + @Override + public String getDescription() { + return "An algorithm for subtracting a sets of occurrence points from another. Sets refer to species coming from the Species Discovery Facility of D4Science"; + } + + protected void manageHighProbability(float probability, OccurrenceRecord leftOcc, OccurrenceRecord rightOcc) { + //cancel the left Occ record matching the right + objectstodelete.add(leftOcc); + } + + @Override + protected void manageLowProbability(float probability, OccurrenceRecord leftOcc, OccurrenceRecord rightOcc) { + + } + + +} diff --git a/src/main/java/org/gcube/dataanalysis/ecoengine/transducers/QueryExecutor.java b/src/main/java/org/gcube/dataanalysis/ecoengine/transducers/QueryExecutor.java index e33c1ca..c3de97d 100644 --- a/src/main/java/org/gcube/dataanalysis/ecoengine/transducers/QueryExecutor.java +++ b/src/main/java/org/gcube/dataanalysis/ecoengine/transducers/QueryExecutor.java @@ -103,7 +103,9 @@ public class QueryExecutor implements Transducerer { throw e; } finally { if (dbconnection != null) + try{ dbconnection.close(); + }catch(Exception e2){} status = 100; AnalysisLogger.getLogger().trace("Processing Finished and db closed"); } diff --git a/target/apidocs/allclasses-frame.html b/target/apidocs/allclasses-frame.html index 80225a9..1ef57be 100644 --- a/target/apidocs/allclasses-frame.html +++ b/target/apidocs/allclasses-frame.html @@ -2,13 +2,13 @@ - + All Classes (ecological-engine 1.4.0-SNAPSHOT API) - + @@ -520,6 +520,8 @@ All Classes (ecological-engine 1.4.0-SNAPSHOT API)
TestBayesianModels
+TestBayesianModelsDBTest +
TestBioClimateAnalysis
TestClusterer @@ -542,6 +544,8 @@ All Classes (ecological-engine 1.4.0-SNAPSHOT API)
TestHSPECBioClimateAnalysisProd
+TestMahoutComparison +
TestNN
TestsDUMMYGeneration diff --git a/target/apidocs/allclasses-noframe.html b/target/apidocs/allclasses-noframe.html index 19d2f6d..45b0248 100644 --- a/target/apidocs/allclasses-noframe.html +++ b/target/apidocs/allclasses-noframe.html @@ -2,13 +2,13 @@ - + All Classes (ecological-engine 1.4.0-SNAPSHOT API) - + @@ -520,6 +520,8 @@ All Classes (ecological-engine 1.4.0-SNAPSHOT API)
TestBayesianModels
+TestBayesianModelsDBTest +
TestBioClimateAnalysis
TestClusterer @@ -542,6 +544,8 @@ All Classes (ecological-engine 1.4.0-SNAPSHOT API)
TestHSPECBioClimateAnalysisProd
+TestMahoutComparison +
TestNN
TestsDUMMYGeneration diff --git a/target/apidocs/constant-values.html b/target/apidocs/constant-values.html index da43bc8..c717d7c 100644 --- a/target/apidocs/constant-values.html +++ b/target/apidocs/constant-values.html @@ -2,13 +2,13 @@ - + Constant Field Values (ecological-engine 1.4.0-SNAPSHOT API) - + diff --git a/target/apidocs/deprecated-list.html b/target/apidocs/deprecated-list.html index b300c74..dd1bb55 100644 --- a/target/apidocs/deprecated-list.html +++ b/target/apidocs/deprecated-list.html @@ -2,13 +2,13 @@ - + Deprecated List (ecological-engine 1.4.0-SNAPSHOT API) - + diff --git a/target/apidocs/help-doc.html b/target/apidocs/help-doc.html index bd9e529..3f2430b 100644 --- a/target/apidocs/help-doc.html +++ b/target/apidocs/help-doc.html @@ -2,13 +2,13 @@ - + API Help (ecological-engine 1.4.0-SNAPSHOT API) - + diff --git a/target/apidocs/index-all.html b/target/apidocs/index-all.html index f8a8b80..efc7479 100644 --- a/target/apidocs/index-all.html +++ b/target/apidocs/index-all.html @@ -2,13 +2,13 @@ - + Index (ecological-engine 1.4.0-SNAPSHOT API) - + @@ -4766,6 +4766,9 @@ Static method in class org.gcube.dataanalysis.ecoengine.test.checks.main(String[]) - Static method in class org.gcube.dataanalysis.ecoengine.test.checks.TestBayesianModels
  +
main(String[]) - +Static method in class org.gcube.dataanalysis.ecoengine.test.checks.TestBayesianModelsDBTest +
 
main(String[]) - Static method in class org.gcube.dataanalysis.ecoengine.test.checks.TestBioClimateAnalysis
  @@ -4784,6 +4787,9 @@ Static method in class org.gcube.dataanalysis.ecoengine.test.checks.main(String[]) - Static method in class org.gcube.dataanalysis.ecoengine.test.checks.TestHSPECBioClimateAnalysisProd
  +
main(String[]) - +Static method in class org.gcube.dataanalysis.ecoengine.test.checks.TestMahoutComparison +
 
main(String[]) - Static method in class org.gcube.dataanalysis.ecoengine.test.checks.TestsDUMMYGeneration
example of parallel processing on a single machine the procedure will generate a new table for a distribution on suitable species @@ -4871,6 +4877,9 @@ Static method in class org.gcube.dataanalysis.ecoengine.clustering.main1(String[]) - Static method in class org.gcube.dataanalysis.ecoengine.test.checks.TestBayesianModels
example of parallel processing on a single machine the procedure will generate a new table for a distribution on suitable species +
main1(String[]) - +Static method in class org.gcube.dataanalysis.ecoengine.test.checks.TestBayesianModelsDBTest +
example of parallel processing on a single machine the procedure will generate a new table for a distribution on suitable species
main1(String[]) - Static method in class org.gcube.dataanalysis.ecoengine.test.checks.TestBioClimateAnalysis
  @@ -4880,9 +4889,15 @@ Static method in class org.gcube.dataanalysis.ecoengine.test.experiments.latimer
main1(String[]) - Static method in class org.gcube.dataanalysis.ecoengine.test.neuralnetwork.TestNN
  +
main1(String[]) - +Static method in class org.gcube.dataanalysis.ecoengine.test.ProduceTestMap +
 
main1(String[]) - Static method in class org.gcube.dataanalysis.ecoengine.utils.Operations
  +
main2(String[]) - +Static method in class org.gcube.dataanalysis.ecoengine.test.ProduceTestMap +
 
mainCluster(String[]) - Static method in class org.gcube.dataanalysis.ecoengine.clustering.DBScan
  @@ -6991,6 +7006,9 @@ Constructor for class org.gcube.dataanalysis.ecoengine.spatialdistributions.TestBayesianModels - Class in org.gcube.dataanalysis.ecoengine.test.checks
 
TestBayesianModels() - Constructor for class org.gcube.dataanalysis.ecoengine.test.checks.TestBayesianModels
  +
TestBayesianModelsDBTest - Class in org.gcube.dataanalysis.ecoengine.test.checks
 
TestBayesianModelsDBTest() - +Constructor for class org.gcube.dataanalysis.ecoengine.test.checks.TestBayesianModelsDBTest +
 
TestBioClimateAnalysis - Class in org.gcube.dataanalysis.ecoengine.test.checks
 
TestBioClimateAnalysis() - Constructor for class org.gcube.dataanalysis.ecoengine.test.checks.TestBioClimateAnalysis
  @@ -7036,6 +7054,9 @@ Constructor for class org.gcube.dataanalysis.ecoengine.test.checks.TestHSPECBioClimateAnalysisProd - Class in org.gcube.dataanalysis.ecoengine.test.checks
 
TestHSPECBioClimateAnalysisProd() - Constructor for class org.gcube.dataanalysis.ecoengine.test.checks.TestHSPECBioClimateAnalysisProd
  +
TestMahoutComparison - Class in org.gcube.dataanalysis.ecoengine.test.checks
 
TestMahoutComparison() - +Constructor for class org.gcube.dataanalysis.ecoengine.test.checks.TestMahoutComparison +
 
TestNN - Class in org.gcube.dataanalysis.ecoengine.test.neuralnetwork
 
TestNN() - Constructor for class org.gcube.dataanalysis.ecoengine.test.neuralnetwork.TestNN
  diff --git a/target/apidocs/index.html b/target/apidocs/index.html index 89b00d1..2db97f4 100644 --- a/target/apidocs/index.html +++ b/target/apidocs/index.html @@ -2,7 +2,7 @@ - + ecological-engine 1.4.0-SNAPSHOT API diff --git a/target/apidocs/org/gcube/contentmanagement/graphtools/abstracts/GenericDBExtractor.html b/target/apidocs/org/gcube/contentmanagement/graphtools/abstracts/GenericDBExtractor.html index ac95933..0e07f80 100644 --- a/target/apidocs/org/gcube/contentmanagement/graphtools/abstracts/GenericDBExtractor.html +++ b/target/apidocs/org/gcube/contentmanagement/graphtools/abstracts/GenericDBExtractor.html @@ -2,13 +2,13 @@ <!--NewPage--> <HTML> <HEAD> -<!-- Generated by javadoc (build 1.6.0_26) on Mon Oct 22 11:35:49 CEST 2012 --> +<!-- Generated by javadoc (build 1.6.0_26) on Wed Oct 31 16:08:39 CET 2012 --> <META http-equiv="Content-Type" content="text/html; charset=UTF-8"> <TITLE> GenericDBExtractor (ecological-engine 1.4.0-SNAPSHOT API) - + diff --git a/target/apidocs/org/gcube/contentmanagement/graphtools/abstracts/GenericStandaloneGraph.html b/target/apidocs/org/gcube/contentmanagement/graphtools/abstracts/GenericStandaloneGraph.html index af67dab..deb6c50 100644 --- a/target/apidocs/org/gcube/contentmanagement/graphtools/abstracts/GenericStandaloneGraph.html +++ b/target/apidocs/org/gcube/contentmanagement/graphtools/abstracts/GenericStandaloneGraph.html @@ -2,13 +2,13 @@ - 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+ Uses of Interface org.gcube.contentmanagement.graphtools.abstracts.GenericDBExtractor (ecological-engine 1.4.0-SNAPSHOT API) - + diff --git a/target/apidocs/org/gcube/contentmanagement/graphtools/abstracts/class-use/GenericStandaloneGraph.html b/target/apidocs/org/gcube/contentmanagement/graphtools/abstracts/class-use/GenericStandaloneGraph.html index fb266cf..ded5a24 100644 --- a/target/apidocs/org/gcube/contentmanagement/graphtools/abstracts/class-use/GenericStandaloneGraph.html +++ b/target/apidocs/org/gcube/contentmanagement/graphtools/abstracts/class-use/GenericStandaloneGraph.html @@ -2,13 +2,13 @@ - + Uses of Class org.gcube.contentmanagement.graphtools.abstracts.GenericStandaloneGraph (ecological-engine 1.4.0-SNAPSHOT API) - + diff --git a/target/apidocs/org/gcube/contentmanagement/graphtools/abstracts/class-use/SamplesTable.html b/target/apidocs/org/gcube/contentmanagement/graphtools/abstracts/class-use/SamplesTable.html index a12880f..8578ac6 100644 --- a/target/apidocs/org/gcube/contentmanagement/graphtools/abstracts/class-use/SamplesTable.html +++ b/target/apidocs/org/gcube/contentmanagement/graphtools/abstracts/class-use/SamplesTable.html @@ -2,13 +2,13 @@ - 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+ Uses of Class org.gcube.dataanalysis.ecoengine.spatialdistributions.AquamapsNative2050 (ecological-engine 1.4.0-SNAPSHOT API) - + diff --git a/target/apidocs/org/gcube/dataanalysis/ecoengine/spatialdistributions/class-use/AquamapsSuitable.html b/target/apidocs/org/gcube/dataanalysis/ecoengine/spatialdistributions/class-use/AquamapsSuitable.html index af84b44..1e51f26 100644 --- a/target/apidocs/org/gcube/dataanalysis/ecoengine/spatialdistributions/class-use/AquamapsSuitable.html +++ b/target/apidocs/org/gcube/dataanalysis/ecoengine/spatialdistributions/class-use/AquamapsSuitable.html @@ -2,13 +2,13 @@ - + Uses of Class org.gcube.dataanalysis.ecoengine.spatialdistributions.AquamapsSuitable (ecological-engine 1.4.0-SNAPSHOT API) - + diff --git a/target/apidocs/org/gcube/dataanalysis/ecoengine/spatialdistributions/class-use/AquamapsSuitable2050.html b/target/apidocs/org/gcube/dataanalysis/ecoengine/spatialdistributions/class-use/AquamapsSuitable2050.html index 352fa1d..25446fa 100644 --- a/target/apidocs/org/gcube/dataanalysis/ecoengine/spatialdistributions/class-use/AquamapsSuitable2050.html +++ b/target/apidocs/org/gcube/dataanalysis/ecoengine/spatialdistributions/class-use/AquamapsSuitable2050.html @@ -2,13 +2,13 @@ - + Uses of Class org.gcube.dataanalysis.ecoengine.spatialdistributions.AquamapsSuitable2050 (ecological-engine 1.4.0-SNAPSHOT API) - + diff --git a/target/apidocs/org/gcube/dataanalysis/ecoengine/spatialdistributions/class-use/BayesianDistribution.html b/target/apidocs/org/gcube/dataanalysis/ecoengine/spatialdistributions/class-use/BayesianDistribution.html index 7c1d35d..b1b0dea 100644 --- a/target/apidocs/org/gcube/dataanalysis/ecoengine/spatialdistributions/class-use/BayesianDistribution.html +++ b/target/apidocs/org/gcube/dataanalysis/ecoengine/spatialdistributions/class-use/BayesianDistribution.html @@ -2,13 +2,13 @@ - + Uses of Class org.gcube.dataanalysis.ecoengine.spatialdistributions.BayesianDistribution (ecological-engine 1.4.0-SNAPSHOT API) - + diff --git a/target/apidocs/org/gcube/dataanalysis/ecoengine/spatialdistributions/class-use/DummyAlgorithm.html b/target/apidocs/org/gcube/dataanalysis/ecoengine/spatialdistributions/class-use/DummyAlgorithm.html index 330cfad..505ad92 100644 --- a/target/apidocs/org/gcube/dataanalysis/ecoengine/spatialdistributions/class-use/DummyAlgorithm.html +++ b/target/apidocs/org/gcube/dataanalysis/ecoengine/spatialdistributions/class-use/DummyAlgorithm.html @@ -2,13 +2,13 @@ - + Uses of Class org.gcube.dataanalysis.ecoengine.spatialdistributions.DummyAlgorithm (ecological-engine 1.4.0-SNAPSHOT API) - + diff --git a/target/apidocs/org/gcube/dataanalysis/ecoengine/spatialdistributions/class-use/FeedForwardNeuralNetworkDistribution.html b/target/apidocs/org/gcube/dataanalysis/ecoengine/spatialdistributions/class-use/FeedForwardNeuralNetworkDistribution.html index 8bf01d3..bdc3c9d 100644 --- a/target/apidocs/org/gcube/dataanalysis/ecoengine/spatialdistributions/class-use/FeedForwardNeuralNetworkDistribution.html +++ b/target/apidocs/org/gcube/dataanalysis/ecoengine/spatialdistributions/class-use/FeedForwardNeuralNetworkDistribution.html @@ -2,13 +2,13 @@ - + Uses of Class org.gcube.dataanalysis.ecoengine.spatialdistributions.FeedForwardNeuralNetworkDistribution (ecological-engine 1.4.0-SNAPSHOT API) - + diff --git a/target/apidocs/org/gcube/dataanalysis/ecoengine/spatialdistributions/class-use/TestAlgorithm.html b/target/apidocs/org/gcube/dataanalysis/ecoengine/spatialdistributions/class-use/TestAlgorithm.html index 759d83d..3184e51 100644 --- a/target/apidocs/org/gcube/dataanalysis/ecoengine/spatialdistributions/class-use/TestAlgorithm.html +++ b/target/apidocs/org/gcube/dataanalysis/ecoengine/spatialdistributions/class-use/TestAlgorithm.html @@ -2,13 +2,13 @@ - + Uses of Class org.gcube.dataanalysis.ecoengine.spatialdistributions.TestAlgorithm (ecological-engine 1.4.0-SNAPSHOT API) - + diff --git a/target/apidocs/org/gcube/dataanalysis/ecoengine/spatialdistributions/package-frame.html b/target/apidocs/org/gcube/dataanalysis/ecoengine/spatialdistributions/package-frame.html index e04addb..446467b 100644 --- a/target/apidocs/org/gcube/dataanalysis/ecoengine/spatialdistributions/package-frame.html +++ b/target/apidocs/org/gcube/dataanalysis/ecoengine/spatialdistributions/package-frame.html @@ -2,13 +2,13 @@ - + org.gcube.dataanalysis.ecoengine.spatialdistributions (ecological-engine 1.4.0-SNAPSHOT API) - + diff --git a/target/apidocs/org/gcube/dataanalysis/ecoengine/spatialdistributions/package-summary.html b/target/apidocs/org/gcube/dataanalysis/ecoengine/spatialdistributions/package-summary.html index bd673ad..ff01f37 100644 --- a/target/apidocs/org/gcube/dataanalysis/ecoengine/spatialdistributions/package-summary.html +++ b/target/apidocs/org/gcube/dataanalysis/ecoengine/spatialdistributions/package-summary.html @@ -2,13 +2,13 @@ - + org.gcube.dataanalysis.ecoengine.spatialdistributions (ecological-engine 1.4.0-SNAPSHOT API) - + diff --git a/target/apidocs/org/gcube/dataanalysis/ecoengine/spatialdistributions/package-tree.html b/target/apidocs/org/gcube/dataanalysis/ecoengine/spatialdistributions/package-tree.html index c9bf1e1..fe143ab 100644 --- a/target/apidocs/org/gcube/dataanalysis/ecoengine/spatialdistributions/package-tree.html +++ b/target/apidocs/org/gcube/dataanalysis/ecoengine/spatialdistributions/package-tree.html @@ -2,13 +2,13 @@ - + org.gcube.dataanalysis.ecoengine.spatialdistributions Class Hierarchy (ecological-engine 1.4.0-SNAPSHOT API) - + diff --git a/target/apidocs/org/gcube/dataanalysis/ecoengine/spatialdistributions/package-use.html b/target/apidocs/org/gcube/dataanalysis/ecoengine/spatialdistributions/package-use.html index c51623d..dadd254 100644 --- a/target/apidocs/org/gcube/dataanalysis/ecoengine/spatialdistributions/package-use.html +++ b/target/apidocs/org/gcube/dataanalysis/ecoengine/spatialdistributions/package-use.html @@ -2,13 +2,13 @@ - + Uses of Package org.gcube.dataanalysis.ecoengine.spatialdistributions (ecological-engine 1.4.0-SNAPSHOT API) - + diff --git a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/PerformanceTests.html b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/PerformanceTests.html index 7102b37..82617dd 100644 --- a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/PerformanceTests.html +++ b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/PerformanceTests.html @@ -2,13 +2,13 @@ - + PerformanceTests (ecological-engine 1.4.0-SNAPSHOT API) - + diff --git a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/ProduceTestMap.html b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/ProduceTestMap.html index fad99bb..67e38be 100644 --- a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/ProduceTestMap.html +++ b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/ProduceTestMap.html @@ -2,13 +2,13 @@ - + ProduceTestMap (ecological-engine 1.4.0-SNAPSHOT API) - + @@ -135,6 +135,22 @@ Class ProduceTestMap static void main(String[] args) +
+            + + + +static void +main1(String[] args) + +
+            + + + +static void +main2(String[] args) +
            @@ -178,6 +194,20 @@ public ProduceTestMap() +

+main2

+
+public static void main2(String[] args)
+                  throws Exception
+
+
+ +
Throws: +
Exception
+
+
+
+

main

@@ -186,6 +216,20 @@ public static void main(Exception
+
+ +
+ +

+main1

+
+public static void main1(String[] args)
+                  throws Exception
+
+
+
Throws:
Exception
diff --git a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/TablesComparison.html b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/TablesComparison.html index b20374a..241e192 100644 --- a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/TablesComparison.html +++ b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/TablesComparison.html @@ -2,13 +2,13 @@ - + TablesComparison (ecological-engine 1.4.0-SNAPSHOT API) - + diff --git a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/TestsMetaInfo.html b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/TestsMetaInfo.html index c769e8d..cdca5bb 100644 --- a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/TestsMetaInfo.html +++ b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/TestsMetaInfo.html @@ -2,13 +2,13 @@ - + TestsMetaInfo (ecological-engine 1.4.0-SNAPSHOT API) - + diff --git a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/RegressionComplexGeneration.ThreadCalculator.html b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/RegressionComplexGeneration.ThreadCalculator.html index 82a5d41..dad7fc7 100644 --- a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/RegressionComplexGeneration.ThreadCalculator.html +++ b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/RegressionComplexGeneration.ThreadCalculator.html @@ -2,13 +2,13 @@ - + RegressionComplexGeneration.ThreadCalculator (ecological-engine 1.4.0-SNAPSHOT API) - + diff --git a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/RegressionComplexGeneration.html b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/RegressionComplexGeneration.html index 5c6929a..83c095b 100644 --- a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/RegressionComplexGeneration.html +++ b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/RegressionComplexGeneration.html @@ -2,13 +2,13 @@ - + RegressionComplexGeneration (ecological-engine 1.4.0-SNAPSHOT API) - + diff --git a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/RegressionSimpleGeneration.ThreadCalculator.html b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/RegressionSimpleGeneration.ThreadCalculator.html index 61d228b..91b8544 100644 --- a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/RegressionSimpleGeneration.ThreadCalculator.html +++ b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/RegressionSimpleGeneration.ThreadCalculator.html @@ -2,13 +2,13 @@ - + RegressionSimpleGeneration.ThreadCalculator (ecological-engine 1.4.0-SNAPSHOT API) - + diff --git a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/RegressionSimpleGeneration.html b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/RegressionSimpleGeneration.html index f697b0e..0bf632e 100644 --- a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/RegressionSimpleGeneration.html +++ b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/RegressionSimpleGeneration.html @@ -2,13 +2,13 @@ - + RegressionSimpleGeneration (ecological-engine 1.4.0-SNAPSHOT API) - + diff --git a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/TestBayesianModels.html b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/TestBayesianModels.html index 20d3de2..e42ec6c 100644 --- a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/TestBayesianModels.html +++ b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/TestBayesianModels.html @@ -2,13 +2,13 @@ - + TestBayesianModels (ecological-engine 1.4.0-SNAPSHOT API) - + @@ -57,7 +57,7 @@ function windowTitle()  PREV CLASS  - NEXT CLASSNEXT CLASS FRAMES    NO FRAMES   @@ -246,7 +246,7 @@ public static void main(  PREV CLASS  - NEXT CLASSNEXT CLASS FRAMES    NO FRAMES   diff --git a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/TestBayesianModelsDBTest.html b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/TestBayesianModelsDBTest.html new file mode 100644 index 0000000..356e919 --- /dev/null +++ b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/TestBayesianModelsDBTest.html @@ -0,0 +1,280 @@ + + + + + + + +TestBayesianModelsDBTest (ecological-engine 1.4.0-SNAPSHOT API) + + + + + + + + + + + + +
+ + + + + + + + + + + + + + + + + + + +
+ +
+ + + +
+ +

+ +org.gcube.dataanalysis.ecoengine.test.checks +
+Class TestBayesianModelsDBTest

+
+java.lang.Object
+  extended by org.gcube.dataanalysis.ecoengine.test.checks.TestBayesianModelsDBTest
+
+
+
+
public class TestBayesianModelsDBTest
extends Object
+ + +

+


+ +

+ + + + + + + + + + + +
+Constructor Summary
TestBayesianModelsDBTest() + +
+           
+  + + + + + + + + + + + + + + + +
+Method Summary
+static voidmain(String[] args) + +
+           
+static voidmain1(String[] args) + +
+          example of parallel processing on a single machine the procedure will generate a new table for a distribution on suitable species
+ + + + + + + +
Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
+  +

+ + + + + + + + +
+Constructor Detail
+ +

+TestBayesianModelsDBTest

+
+public TestBayesianModelsDBTest()
+
+
+ + + + + + + + +
+Method Detail
+ +

+main1

+
+public static void main1(String[] args)
+                  throws Exception
+
+
example of parallel processing on a single machine the procedure will generate a new table for a distribution on suitable species +

+

+ +
Throws: +
Exception
+
+
+
+ +

+main

+
+public static void main(String[] args)
+                 throws Exception
+
+
+ +
Throws: +
Exception
+
+
+ +
+ + + + + + + + + + + + + + + + + + + +
+ +
+ + + +
+Copyright © 2012. All Rights Reserved. + + diff --git a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/TestBioClimateAnalysis.html b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/TestBioClimateAnalysis.html index d745b4b..b3b3468 100644 --- a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/TestBioClimateAnalysis.html +++ b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/TestBioClimateAnalysis.html @@ -2,13 +2,13 @@ - + TestBioClimateAnalysis (ecological-engine 1.4.0-SNAPSHOT API) - + @@ -56,7 +56,7 @@ function windowTitle() PREV CLASS  + PREV CLASS   NEXT CLASS FRAMES   @@ -243,7 +243,7 @@ public static void main1(PREV CLASS  + PREV CLASS   NEXT CLASS FRAMES   diff --git a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/TestClusterer.ThreadCalculator.html b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/TestClusterer.ThreadCalculator.html index 2ec98b6..797a907 100644 --- a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/TestClusterer.ThreadCalculator.html +++ b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/TestClusterer.ThreadCalculator.html @@ -2,13 +2,13 @@ - + TestClusterer.ThreadCalculator (ecological-engine 1.4.0-SNAPSHOT API) - + diff --git a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/TestClusterer.html b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/TestClusterer.html index 3fceb73..3d77c3e 100644 --- a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/TestClusterer.html +++ b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/TestClusterer.html @@ -2,13 +2,13 @@ - + TestClusterer (ecological-engine 1.4.0-SNAPSHOT API) - + diff --git a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/TestDBNEXTEvaluators.html b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/TestDBNEXTEvaluators.html index 1a796ff..42322e9 100644 --- a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/TestDBNEXTEvaluators.html +++ b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/TestDBNEXTEvaluators.html @@ -2,13 +2,13 @@ - + TestDBNEXTEvaluators (ecological-engine 1.4.0-SNAPSHOT API) - + diff --git a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/TestEvaluation.ThreadCalculator.html b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/TestEvaluation.ThreadCalculator.html index 6d8255e..c79a50f 100644 --- a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/TestEvaluation.ThreadCalculator.html +++ b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/TestEvaluation.ThreadCalculator.html @@ -2,13 +2,13 @@ - + TestEvaluation.ThreadCalculator (ecological-engine 1.4.0-SNAPSHOT API) - + diff --git a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/TestEvaluation.html b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/TestEvaluation.html index 69b68f5..31e36d6 100644 --- a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/TestEvaluation.html +++ b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/TestEvaluation.html @@ -2,13 +2,13 @@ - + TestEvaluation (ecological-engine 1.4.0-SNAPSHOT API) - + diff --git a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/TestHSPECBioClimateAnalysisDev.html b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/TestHSPECBioClimateAnalysisDev.html index aa4563f..0dba8f5 100644 --- a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/TestHSPECBioClimateAnalysisDev.html +++ b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/TestHSPECBioClimateAnalysisDev.html @@ -2,13 +2,13 @@ - + TestHSPECBioClimateAnalysisDev (ecological-engine 1.4.0-SNAPSHOT API) - + diff --git a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/TestHSPECBioClimateAnalysisProd.html b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/TestHSPECBioClimateAnalysisProd.html index 79a0149..1a505df 100644 --- a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/TestHSPECBioClimateAnalysisProd.html +++ b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/TestHSPECBioClimateAnalysisProd.html @@ -2,13 +2,13 @@ - + TestHSPECBioClimateAnalysisProd (ecological-engine 1.4.0-SNAPSHOT API) - + @@ -57,7 +57,7 @@ function windowTitle()  PREV CLASS  - NEXT CLASSNEXT CLASS FRAMES    NO FRAMES   @@ -222,7 +222,7 @@ public static void main(  PREV CLASS  - NEXT CLASSNEXT CLASS FRAMES    NO FRAMES   diff --git a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/TestMahoutComparison.html b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/TestMahoutComparison.html new file mode 100644 index 0000000..e49e4f3 --- /dev/null +++ b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/TestMahoutComparison.html @@ -0,0 +1,256 @@ + + + + + + + +TestMahoutComparison (ecological-engine 1.4.0-SNAPSHOT API) + + + + + + + + + + + + +
+ + + + + + + + + + + + + + + + + + + +
+ +
+ + + +
+ +

+ +org.gcube.dataanalysis.ecoengine.test.checks +
+Class TestMahoutComparison

+
+java.lang.Object
+  extended by org.gcube.dataanalysis.ecoengine.test.checks.TestMahoutComparison
+
+
+
+
public class TestMahoutComparison
extends Object
+ + +

+


+ +

+ + + + + + + + + + + +
+Constructor Summary
TestMahoutComparison() + +
+           
+  + + + + + + + + + + + +
+Method Summary
+static voidmain(String[] args) + +
+           
+ + + + + + + +
Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
+  +

+ + + + + + + + +
+Constructor Detail
+ +

+TestMahoutComparison

+
+public TestMahoutComparison()
+
+
+ + + + + + + + +
+Method Detail
+ +

+main

+
+public static void main(String[] args)
+                 throws Exception
+
+
+ +
Throws: +
Exception
+
+
+ +
+ + + + + + + + + + + + + + + + + + + +
+ +
+ + + +
+Copyright © 2012. All Rights Reserved. + + diff --git a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/TestSingleHSPECGeneration.ThreadCalculator.html b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/TestSingleHSPECGeneration.ThreadCalculator.html index f58b7ee..5baa5fc 100644 --- a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/TestSingleHSPECGeneration.ThreadCalculator.html +++ b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/TestSingleHSPECGeneration.ThreadCalculator.html @@ -2,13 +2,13 @@ - + TestSingleHSPECGeneration.ThreadCalculator (ecological-engine 1.4.0-SNAPSHOT API) - + diff --git a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/TestSingleHSPECGeneration.html b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/TestSingleHSPECGeneration.html index 23c020d..821d082 100644 --- a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/TestSingleHSPECGeneration.html +++ b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/TestSingleHSPECGeneration.html @@ -2,13 +2,13 @@ - + TestSingleHSPECGeneration (ecological-engine 1.4.0-SNAPSHOT API) - + diff --git a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/TestTransducer.ThreadCalculator.html b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/TestTransducer.ThreadCalculator.html index f4951c6..4e0a933 100644 --- a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/TestTransducer.ThreadCalculator.html +++ b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/TestTransducer.ThreadCalculator.html @@ -2,13 +2,13 @@ - + TestTransducer.ThreadCalculator (ecological-engine 1.4.0-SNAPSHOT API) - + diff --git a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/TestTransducer.html b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/TestTransducer.html index a979ea2..f38253c 100644 --- a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/TestTransducer.html +++ b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/TestTransducer.html @@ -2,13 +2,13 @@ - + TestTransducer (ecological-engine 1.4.0-SNAPSHOT API) - + diff --git a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/TestTransducers.html b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/TestTransducers.html index ed1de6b..22d0665 100644 --- a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/TestTransducers.html +++ b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/TestTransducers.html @@ -2,13 +2,13 @@ - + TestTransducers (ecological-engine 1.4.0-SNAPSHOT API) - + diff --git a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/TestsDUMMYGeneration.ThreadCalculator.html b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/TestsDUMMYGeneration.ThreadCalculator.html index 78cf41a..843195a 100644 --- a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/TestsDUMMYGeneration.ThreadCalculator.html +++ b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/TestsDUMMYGeneration.ThreadCalculator.html @@ -2,13 +2,13 @@ - + TestsDUMMYGeneration.ThreadCalculator (ecological-engine 1.4.0-SNAPSHOT API) - + diff --git a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/TestsDUMMYGeneration.html b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/TestsDUMMYGeneration.html index 4ddbd58..cc1db60 100644 --- a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/TestsDUMMYGeneration.html +++ b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/TestsDUMMYGeneration.html @@ -2,13 +2,13 @@ - + TestsDUMMYGeneration (ecological-engine 1.4.0-SNAPSHOT API) - + @@ -56,7 +56,7 @@ function windowTitle() PREV CLASS  + PREV CLASS   NEXT CLASS FRAMES   @@ -240,7 +240,7 @@ public static void main(PREV CLASS  + PREV CLASS   NEXT CLASS FRAMES   diff --git a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/TestsHSPENTraining.ThreadCalculator.html b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/TestsHSPENTraining.ThreadCalculator.html index 872efb4..60d804e 100644 --- a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/TestsHSPENTraining.ThreadCalculator.html +++ b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/TestsHSPENTraining.ThreadCalculator.html @@ -2,13 +2,13 @@ - + TestsHSPENTraining.ThreadCalculator (ecological-engine 1.4.0-SNAPSHOT API) - + diff --git a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/TestsHSPENTraining.html b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/TestsHSPENTraining.html index 3097928..24b0b8c 100644 --- a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/TestsHSPENTraining.html +++ b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/TestsHSPENTraining.html @@ -2,13 +2,13 @@ - + TestsHSPENTraining (ecological-engine 1.4.0-SNAPSHOT API) - + diff --git a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/TestsTESTGeneration.ThreadCalculator.html b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/TestsTESTGeneration.ThreadCalculator.html index 9c17161..bacc460 100644 --- a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/TestsTESTGeneration.ThreadCalculator.html +++ b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/TestsTESTGeneration.ThreadCalculator.html @@ -2,13 +2,13 @@ - + TestsTESTGeneration.ThreadCalculator (ecological-engine 1.4.0-SNAPSHOT API) - + diff --git a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/TestsTESTGeneration.html b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/TestsTESTGeneration.html index fe94dc3..f420c05 100644 --- a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/TestsTESTGeneration.html +++ b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/TestsTESTGeneration.html @@ -2,13 +2,13 @@ - + TestsTESTGeneration (ecological-engine 1.4.0-SNAPSHOT API) - + diff --git a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/RegressionComplexGeneration.ThreadCalculator.html b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/RegressionComplexGeneration.ThreadCalculator.html index e2c37dd..4d8e14e 100644 --- a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/RegressionComplexGeneration.ThreadCalculator.html +++ b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/RegressionComplexGeneration.ThreadCalculator.html @@ -2,13 +2,13 @@ - + Uses of Class org.gcube.dataanalysis.ecoengine.test.checks.RegressionComplexGeneration.ThreadCalculator (ecological-engine 1.4.0-SNAPSHOT API) - + diff --git a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/RegressionComplexGeneration.html b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/RegressionComplexGeneration.html index 61ab335..0c39507 100644 --- a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/RegressionComplexGeneration.html +++ b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/RegressionComplexGeneration.html @@ -2,13 +2,13 @@ - + Uses of Class org.gcube.dataanalysis.ecoengine.test.checks.RegressionComplexGeneration (ecological-engine 1.4.0-SNAPSHOT API) - + diff --git a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/RegressionSimpleGeneration.ThreadCalculator.html b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/RegressionSimpleGeneration.ThreadCalculator.html index 58cd73f..ac3059f 100644 --- a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/RegressionSimpleGeneration.ThreadCalculator.html +++ b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/RegressionSimpleGeneration.ThreadCalculator.html @@ -2,13 +2,13 @@ - + Uses of Class org.gcube.dataanalysis.ecoengine.test.checks.RegressionSimpleGeneration.ThreadCalculator (ecological-engine 1.4.0-SNAPSHOT API) - + diff --git a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/RegressionSimpleGeneration.html b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/RegressionSimpleGeneration.html index cd81dee..67108b0 100644 --- a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/RegressionSimpleGeneration.html +++ b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/RegressionSimpleGeneration.html @@ -2,13 +2,13 @@ - + Uses of Class org.gcube.dataanalysis.ecoengine.test.checks.RegressionSimpleGeneration (ecological-engine 1.4.0-SNAPSHOT API) - + diff --git a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/TestBayesianModels.html b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/TestBayesianModels.html index 7b1a2db..1284756 100644 --- a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/TestBayesianModels.html +++ b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/TestBayesianModels.html @@ -2,13 +2,13 @@ - + Uses of Class org.gcube.dataanalysis.ecoengine.test.checks.TestBayesianModels (ecological-engine 1.4.0-SNAPSHOT API) - + diff --git a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/TestBayesianModelsDBTest.html b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/TestBayesianModelsDBTest.html new file mode 100644 index 0000000..5557d60 --- /dev/null +++ b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/TestBayesianModelsDBTest.html @@ -0,0 +1,145 @@ + + + + + + + +Uses of Class org.gcube.dataanalysis.ecoengine.test.checks.TestBayesianModelsDBTest (ecological-engine 1.4.0-SNAPSHOT API) + + + + + + + + + + + + +
+ + + + + + + + + + + + + + + +
+ +
+ + + +
+
+

+Uses of Class
org.gcube.dataanalysis.ecoengine.test.checks.TestBayesianModelsDBTest

+
+No usage of org.gcube.dataanalysis.ecoengine.test.checks.TestBayesianModelsDBTest +

+


+ + + + + + + + + + + + + + + +
+ +
+ + + +
+Copyright © 2012. All Rights Reserved. + + diff --git a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/TestBioClimateAnalysis.html b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/TestBioClimateAnalysis.html index 7c7439f..ef02877 100644 --- a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/TestBioClimateAnalysis.html +++ b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/TestBioClimateAnalysis.html @@ -2,13 +2,13 @@ - + Uses of Class org.gcube.dataanalysis.ecoengine.test.checks.TestBioClimateAnalysis (ecological-engine 1.4.0-SNAPSHOT API) - + diff --git a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/TestClusterer.ThreadCalculator.html b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/TestClusterer.ThreadCalculator.html index e13125e..759960a 100644 --- a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/TestClusterer.ThreadCalculator.html +++ b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/TestClusterer.ThreadCalculator.html @@ -2,13 +2,13 @@ - + Uses of Class org.gcube.dataanalysis.ecoengine.test.checks.TestClusterer.ThreadCalculator (ecological-engine 1.4.0-SNAPSHOT API) - + diff --git a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/TestClusterer.html b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/TestClusterer.html index afefc94..fbfe039 100644 --- a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/TestClusterer.html +++ b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/TestClusterer.html @@ -2,13 +2,13 @@ - + Uses of Class org.gcube.dataanalysis.ecoengine.test.checks.TestClusterer (ecological-engine 1.4.0-SNAPSHOT API) - + diff --git a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/TestDBNEXTEvaluators.html b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/TestDBNEXTEvaluators.html index 3598ebb..caa8740 100644 --- a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/TestDBNEXTEvaluators.html +++ b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/TestDBNEXTEvaluators.html @@ -2,13 +2,13 @@ - + Uses of Class org.gcube.dataanalysis.ecoengine.test.checks.TestDBNEXTEvaluators (ecological-engine 1.4.0-SNAPSHOT API) - + diff --git a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/TestEvaluation.ThreadCalculator.html b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/TestEvaluation.ThreadCalculator.html index 781fa21..26b022e 100644 --- a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/TestEvaluation.ThreadCalculator.html +++ b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/TestEvaluation.ThreadCalculator.html @@ -2,13 +2,13 @@ - + Uses of Class org.gcube.dataanalysis.ecoengine.test.checks.TestEvaluation.ThreadCalculator (ecological-engine 1.4.0-SNAPSHOT API) - + diff --git a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/TestEvaluation.html b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/TestEvaluation.html index ff6341b..f5b3fee 100644 --- a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/TestEvaluation.html +++ b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/TestEvaluation.html @@ -2,13 +2,13 @@ - + Uses of Class org.gcube.dataanalysis.ecoengine.test.checks.TestEvaluation (ecological-engine 1.4.0-SNAPSHOT API) - + diff --git a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/TestHSPECBioClimateAnalysisDev.html b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/TestHSPECBioClimateAnalysisDev.html index a051415..6ea20cd 100644 --- a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/TestHSPECBioClimateAnalysisDev.html +++ b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/TestHSPECBioClimateAnalysisDev.html @@ -2,13 +2,13 @@ - + Uses of Class org.gcube.dataanalysis.ecoengine.test.checks.TestHSPECBioClimateAnalysisDev (ecological-engine 1.4.0-SNAPSHOT API) - + diff --git a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/TestHSPECBioClimateAnalysisProd.html b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/TestHSPECBioClimateAnalysisProd.html index 5ca5a8b..d368f46 100644 --- a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/TestHSPECBioClimateAnalysisProd.html +++ b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/TestHSPECBioClimateAnalysisProd.html @@ -2,13 +2,13 @@ - + Uses of Class org.gcube.dataanalysis.ecoengine.test.checks.TestHSPECBioClimateAnalysisProd (ecological-engine 1.4.0-SNAPSHOT API) - + diff --git a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/TestMahoutComparison.html b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/TestMahoutComparison.html new file mode 100644 index 0000000..b7bb76e --- /dev/null +++ b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/TestMahoutComparison.html @@ -0,0 +1,145 @@ + + + + + + + +Uses of Class org.gcube.dataanalysis.ecoengine.test.checks.TestMahoutComparison (ecological-engine 1.4.0-SNAPSHOT API) + + + + + + + + + + + + +
+ + + + + + + + + + + + + + + +
+ +
+ + + +
+
+

+Uses of Class
org.gcube.dataanalysis.ecoengine.test.checks.TestMahoutComparison

+
+No usage of org.gcube.dataanalysis.ecoengine.test.checks.TestMahoutComparison +

+


+ + + + + + + + + + + + + + + +
+ +
+ + + +
+Copyright © 2012. All Rights Reserved. + + diff --git a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/TestSingleHSPECGeneration.ThreadCalculator.html b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/TestSingleHSPECGeneration.ThreadCalculator.html index 65ed47e..ce17869 100644 --- a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/TestSingleHSPECGeneration.ThreadCalculator.html +++ b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/TestSingleHSPECGeneration.ThreadCalculator.html @@ -2,13 +2,13 @@ - + Uses of Class org.gcube.dataanalysis.ecoengine.test.checks.TestSingleHSPECGeneration.ThreadCalculator (ecological-engine 1.4.0-SNAPSHOT API) - + diff --git a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/TestSingleHSPECGeneration.html b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/TestSingleHSPECGeneration.html index 0a9f22a..c94d163 100644 --- a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/TestSingleHSPECGeneration.html +++ b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/TestSingleHSPECGeneration.html @@ -2,13 +2,13 @@ - + Uses of Class org.gcube.dataanalysis.ecoengine.test.checks.TestSingleHSPECGeneration (ecological-engine 1.4.0-SNAPSHOT API) - + diff --git a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/TestTransducer.ThreadCalculator.html b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/TestTransducer.ThreadCalculator.html index f30f6b3..d47361c 100644 --- a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/TestTransducer.ThreadCalculator.html +++ b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/TestTransducer.ThreadCalculator.html @@ -2,13 +2,13 @@ - + Uses of Class org.gcube.dataanalysis.ecoengine.test.checks.TestTransducer.ThreadCalculator (ecological-engine 1.4.0-SNAPSHOT API) - + diff --git a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/TestTransducer.html b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/TestTransducer.html index b2db6a6..31622e0 100644 --- a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/TestTransducer.html +++ b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/TestTransducer.html @@ -2,13 +2,13 @@ - + Uses of Class org.gcube.dataanalysis.ecoengine.test.checks.TestTransducer (ecological-engine 1.4.0-SNAPSHOT API) - + diff --git a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/TestTransducers.html b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/TestTransducers.html index 2211264..46badcb 100644 --- a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/TestTransducers.html +++ b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/TestTransducers.html @@ -2,13 +2,13 @@ - + Uses of Class org.gcube.dataanalysis.ecoengine.test.checks.TestTransducers (ecological-engine 1.4.0-SNAPSHOT API) - + diff --git a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/TestsDUMMYGeneration.ThreadCalculator.html b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/TestsDUMMYGeneration.ThreadCalculator.html index 4e96e44..4018296 100644 --- a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/TestsDUMMYGeneration.ThreadCalculator.html +++ b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/TestsDUMMYGeneration.ThreadCalculator.html @@ -2,13 +2,13 @@ - + Uses of Class org.gcube.dataanalysis.ecoengine.test.checks.TestsDUMMYGeneration.ThreadCalculator (ecological-engine 1.4.0-SNAPSHOT API) - + diff --git a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/TestsDUMMYGeneration.html b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/TestsDUMMYGeneration.html index d379f47..b7f2e08 100644 --- a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/TestsDUMMYGeneration.html +++ b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/TestsDUMMYGeneration.html @@ -2,13 +2,13 @@ - + Uses of Class org.gcube.dataanalysis.ecoengine.test.checks.TestsDUMMYGeneration (ecological-engine 1.4.0-SNAPSHOT API) - + diff --git a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/TestsHSPENTraining.ThreadCalculator.html b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/TestsHSPENTraining.ThreadCalculator.html index 64a5cc4..518ad9c 100644 --- a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/TestsHSPENTraining.ThreadCalculator.html +++ b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/TestsHSPENTraining.ThreadCalculator.html @@ -2,13 +2,13 @@ - + Uses of Class org.gcube.dataanalysis.ecoengine.test.checks.TestsHSPENTraining.ThreadCalculator (ecological-engine 1.4.0-SNAPSHOT API) - + diff --git a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/TestsHSPENTraining.html b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/TestsHSPENTraining.html index 5ff818b..a353926 100644 --- a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/TestsHSPENTraining.html +++ b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/TestsHSPENTraining.html @@ -2,13 +2,13 @@ - + Uses of Class org.gcube.dataanalysis.ecoengine.test.checks.TestsHSPENTraining (ecological-engine 1.4.0-SNAPSHOT API) - + diff --git a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/TestsTESTGeneration.ThreadCalculator.html b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/TestsTESTGeneration.ThreadCalculator.html index 00dba71..6906adc 100644 --- a/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/TestsTESTGeneration.ThreadCalculator.html +++ b/target/apidocs/org/gcube/dataanalysis/ecoengine/test/checks/class-use/TestsTESTGeneration.ThreadCalculator.html @@ -2,13 +2,13 @@ - 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    • org.gcube.dataanalysis.ecoengine.test.checks.TestsTESTGeneration
    • org.gcube.dataanalysis.ecoengine.test.checks.TestsTESTGeneration.ThreadCalculator (implements java.lang.Runnable) diff --git a/target/apidocs/serialized-form.html b/target/apidocs/serialized-form.html index a96459b..c881048 100644 --- a/target/apidocs/serialized-form.html +++ b/target/apidocs/serialized-form.html @@ -2,13 +2,13 @@ - + Serialized Form (ecological-engine 1.4.0-SNAPSHOT API) - + diff --git a/target/archive-tmp/fileSetFormatter.1051734519.tmp/INSTALL b/target/archive-tmp/fileSetFormatter.1051734519.tmp/INSTALL new file mode 100644 index 0000000..9bcbb15 --- /dev/null +++ b/target/archive-tmp/fileSetFormatter.1051734519.tmp/INSTALL @@ -0,0 +1 @@ +Used as a library in the gCube Framework \ No newline at end of file diff --git a/target/archive-tmp/fileSetFormatter.1051734519.tmp/INSTALL.1508334958.filtered b/target/archive-tmp/fileSetFormatter.1051734519.tmp/INSTALL.1508334958.filtered new file mode 100644 index 0000000..9bcbb15 --- /dev/null +++ b/target/archive-tmp/fileSetFormatter.1051734519.tmp/INSTALL.1508334958.filtered @@ -0,0 +1 @@ +Used as a library in the gCube Framework \ No newline at end of file diff --git a/target/archive-tmp/fileSetFormatter.1051734519.tmp/LICENSE b/target/archive-tmp/fileSetFormatter.1051734519.tmp/LICENSE new file mode 100644 index 0000000..bd0c2b4 --- /dev/null +++ b/target/archive-tmp/fileSetFormatter.1051734519.tmp/LICENSE @@ -0,0 +1,8 @@ +gCube System - License +------------------------------------------------------------ + +The gCube/gCore software is licensed as Free Open Source software conveying to +the EUPL (http://ec.europa.eu/idabc/eupl). +The software and documentation is provided by its authors/distributors "as is" +and no expressed or implied warranty is given for its use, quality or fitness +for a particular case. diff --git a/target/archive-tmp/fileSetFormatter.1051734519.tmp/LICENSE.1629749097.filtered b/target/archive-tmp/fileSetFormatter.1051734519.tmp/LICENSE.1629749097.filtered new file mode 100644 index 0000000..bd0c2b4 --- /dev/null +++ b/target/archive-tmp/fileSetFormatter.1051734519.tmp/LICENSE.1629749097.filtered @@ -0,0 +1,8 @@ +gCube System - License +------------------------------------------------------------ + +The gCube/gCore software is licensed as Free Open Source software conveying to +the EUPL (http://ec.europa.eu/idabc/eupl). +The software and documentation is provided by its authors/distributors "as is" +and no expressed or implied warranty is given for its use, quality or fitness +for a particular case. diff --git a/target/archive-tmp/fileSetFormatter.1051734519.tmp/MAINTAINERS b/target/archive-tmp/fileSetFormatter.1051734519.tmp/MAINTAINERS new file mode 100644 index 0000000..1f1e62d --- /dev/null +++ b/target/archive-tmp/fileSetFormatter.1051734519.tmp/MAINTAINERS @@ -0,0 +1,2 @@ +Gianpaolo Coro (gianpaolo.coro@isti.cnr.it), CNR Pisa, +Istituto di Scienza e Tecnologie dell'Informazione "A. Faedo" \ No newline at end of file diff --git a/target/archive-tmp/fileSetFormatter.1051734519.tmp/MAINTAINERS.2095965729.filtered b/target/archive-tmp/fileSetFormatter.1051734519.tmp/MAINTAINERS.2095965729.filtered new file mode 100644 index 0000000..1f1e62d --- /dev/null +++ b/target/archive-tmp/fileSetFormatter.1051734519.tmp/MAINTAINERS.2095965729.filtered @@ -0,0 +1,2 @@ +Gianpaolo Coro (gianpaolo.coro@isti.cnr.it), CNR Pisa, +Istituto di Scienza e Tecnologie dell'Informazione "A. Faedo" \ No newline at end of file diff --git a/target/archive-tmp/fileSetFormatter.1051734519.tmp/README b/target/archive-tmp/fileSetFormatter.1051734519.tmp/README new file mode 100644 index 0000000..b13566d --- /dev/null +++ b/target/archive-tmp/fileSetFormatter.1051734519.tmp/README @@ -0,0 +1,42 @@ +The gCube System - Ecological Engine Library +------------------------------------------------------------ + +This work is partially funded by the European Commission in the +context of the D4Science project (www.d4science.eu), under the +1st call of FP7 IST priority. + +Authors +------- + +* Gianpaolo Coro (gianpaolo.coro@isti.cnr.it), CNR Pisa, + Istituto di Scienza e Tecnologie dell'Informazione "A. Faedo" + +Version and Release Date +------------------------ + +version 1.2.0 (03-05-2012) + +Description +-------------------- + +Support library for statistics analysis on Time Series data. + + +Download information +-------------------- + +Source code is available from SVN: +http://svn.research-infrastructures.eu/d4science/gcube/trunk/content-management/EcologicalModelling + +Binaries can be downloaded from: +http://software.d4science.research-infrastructures.eu/ + +Documentation +------------- +VREManager documentation is available on-line from the Projects Documentation Wiki: +https://gcube.wiki.gcube-system.org/gcube/index.php/Ecological_Modeling + +Licensing +--------- + +This software is licensed under the terms you may find in the file named "LICENSE" in this directory. diff --git a/target/archive-tmp/fileSetFormatter.1051734519.tmp/README.1227909510.filtered b/target/archive-tmp/fileSetFormatter.1051734519.tmp/README.1227909510.filtered new file mode 100644 index 0000000..b13566d --- /dev/null +++ b/target/archive-tmp/fileSetFormatter.1051734519.tmp/README.1227909510.filtered @@ -0,0 +1,42 @@ +The gCube System - Ecological Engine Library +------------------------------------------------------------ + +This work is partially funded by the European Commission in the +context of the D4Science project (www.d4science.eu), under the +1st call of FP7 IST priority. + +Authors +------- + +* Gianpaolo Coro (gianpaolo.coro@isti.cnr.it), CNR Pisa, + Istituto di Scienza e Tecnologie dell'Informazione "A. Faedo" + +Version and Release Date +------------------------ + +version 1.2.0 (03-05-2012) + +Description +-------------------- + +Support library for statistics analysis on Time Series data. + + +Download information +-------------------- + +Source code is available from SVN: +http://svn.research-infrastructures.eu/d4science/gcube/trunk/content-management/EcologicalModelling + +Binaries can be downloaded from: +http://software.d4science.research-infrastructures.eu/ + +Documentation +------------- +VREManager documentation is available on-line from the Projects Documentation Wiki: +https://gcube.wiki.gcube-system.org/gcube/index.php/Ecological_Modeling + +Licensing +--------- + +This software is licensed under the terms you may find in the file named "LICENSE" in this directory. diff --git a/target/archive-tmp/fileSetFormatter.1051734519.tmp/changelog.xml b/target/archive-tmp/fileSetFormatter.1051734519.tmp/changelog.xml new file mode 100644 index 0000000..e72b78e --- /dev/null +++ b/target/archive-tmp/fileSetFormatter.1051734519.tmp/changelog.xml @@ -0,0 +1,7 @@ + + + First Release + + \ No newline at end of file diff --git a/target/archive-tmp/fileSetFormatter.1051734519.tmp/changelog.xml.567258680.filtered b/target/archive-tmp/fileSetFormatter.1051734519.tmp/changelog.xml.567258680.filtered new file mode 100644 index 0000000..e72b78e --- /dev/null +++ b/target/archive-tmp/fileSetFormatter.1051734519.tmp/changelog.xml.567258680.filtered @@ -0,0 +1,7 @@ + + + First Release + + \ No newline at end of file diff --git a/target/archive-tmp/profile.xml.1328557775.filtered b/target/archive-tmp/profile.xml.1328557775.filtered new file mode 100644 index 0000000..84c9ac1 --- /dev/null +++ b/target/archive-tmp/profile.xml.1328557775.filtered @@ -0,0 +1,25 @@ + + + + Library + + Ecological Engine Library + EcologicalEngine + ecological-engine + 1.0.0 + + + ecological-engine + 1.4.0-SNAPSHOT + + org.gcube.dataanalysis + ecological-engine + 1.4.0-SNAPSHOT + + + ecological-engine-1.4.0-SNAPSHOT.jar + + + + + \ No newline at end of file diff --git a/target/archive-tmp/svnpath.txt.1206641888.filtered b/target/archive-tmp/svnpath.txt.1206641888.filtered new file mode 100644 index 0000000..3f85e8c --- /dev/null +++ b/target/archive-tmp/svnpath.txt.1206641888.filtered @@ -0,0 +1 @@ +https://svn.d4science.research-infrastructures.eu/gcube/trunk/data-analysis/EcologicalEngine \ No newline at end of file diff --git a/target/ecological-engine-1.4.0-SNAPSHOT-javadoc.jar b/target/ecological-engine-1.4.0-SNAPSHOT-javadoc.jar index b402b1c..3371181 100644 Binary files a/target/ecological-engine-1.4.0-SNAPSHOT-javadoc.jar and b/target/ecological-engine-1.4.0-SNAPSHOT-javadoc.jar differ diff --git a/target/ecological-engine-1.4.0-SNAPSHOT-servicearchive.tar.gz b/target/ecological-engine-1.4.0-SNAPSHOT-servicearchive.tar.gz index 5cb0f38..6c555e2 100644 Binary files a/target/ecological-engine-1.4.0-SNAPSHOT-servicearchive.tar.gz and b/target/ecological-engine-1.4.0-SNAPSHOT-servicearchive.tar.gz differ diff --git a/target/ecological-engine-1.4.0-SNAPSHOT-sources.jar b/target/ecological-engine-1.4.0-SNAPSHOT-sources.jar index 30a4ac2..28a1b78 100644 Binary files a/target/ecological-engine-1.4.0-SNAPSHOT-sources.jar and b/target/ecological-engine-1.4.0-SNAPSHOT-sources.jar differ diff --git a/target/ecological-engine-1.4.0-SNAPSHOT.jar b/target/ecological-engine-1.4.0-SNAPSHOT.jar index f401b7c..de84f37 100644 Binary files a/target/ecological-engine-1.4.0-SNAPSHOT.jar and b/target/ecological-engine-1.4.0-SNAPSHOT.jar differ