173 lines
7.2 KiB
Java
173 lines
7.2 KiB
Java
package org.gcube.dataanalysis.executor.tests;
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import java.util.HashMap;
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import java.util.List;
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import java.util.Map;
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import org.gcube.contentmanagement.lexicalmatcher.utils.AnalysisLogger;
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import org.gcube.dataanalysis.ecoengine.configuration.AlgorithmConfiguration;
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import org.gcube.dataanalysis.ecoengine.datatypes.StatisticalType;
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import org.gcube.dataanalysis.ecoengine.interfaces.ComputationalAgent;
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import org.gcube.dataanalysis.ecoengine.interfaces.Generator;
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import org.gcube.dataanalysis.ecoengine.processing.factories.ClusterersFactory;
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import org.gcube.dataanalysis.ecoengine.processing.factories.EvaluatorsFactory;
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import org.gcube.dataanalysis.ecoengine.processing.factories.GeneratorsFactory;
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import org.gcube.dataanalysis.ecoengine.processing.factories.ModelersFactory;
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import org.gcube.dataanalysis.ecoengine.processing.factories.ProcessorsFactory;
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import org.gcube.dataanalysis.ecoengine.processing.factories.TransducerersFactory;
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public class TestsMetaInfo {
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/**
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* example of parallel processing on a single machine the procedure will generate a new table for a distribution on suitable species
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*
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*/
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public static void main(String[] args) throws Exception {
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System.out.println("***TEST 1 - Get Generation Algorithm Parameters***");
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List<StatisticalType> map;
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// List<StatisticalType> map = GeneratorsFactory.getAlgorithmParameters("./cfg/","DUMMY");
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// System.out.println("input for DUMMY algorithm: "+map);
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AlgorithmConfiguration config = new AlgorithmConfiguration();
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config.setConfigPath("./cfg/");
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StatisticalType type = GeneratorsFactory.getAlgorithmOutput("./cfg/","AQUAMAPS_SUITABLE");
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System.out.println("output for AQUAMAPS_SUITABLE algorithm: "+type);
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type = ModelersFactory.getModelOutput("./cfg/","HSPEN");
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System.out.println("output for HSPEN algorithm: "+type);
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type = EvaluatorsFactory.getEvaluatorOutput("./cfg/","HRS");
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System.out.println("output for HRS algorithm: "+type);
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type = ClusterersFactory.getClustererOutput("./cfg/","DBSCAN");
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System.out.println("output for DBSCAN algorithm: "+type);
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type = TransducerersFactory.getTransducerOutput(config,"BIOCLIMATE_HSPEC");
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System.out.println("output for BIOCLIMATE_HSPEC algorithm: "+type);
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type = TransducerersFactory.getTransducerOutput(config,"BIONYM_LOCAL");
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System.out.println("output for BIONYM_LOCAL algorithm: "+type);
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map = GeneratorsFactory.getAlgorithmParameters("./cfg/","AQUAMAPS_SUITABLE");
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System.out.println("input for AQUAMAPS_SUITABLE algorithm: "+map);
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System.out.println("\n***TEST 2 - Get Generator***");
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Generator g = GeneratorsFactory.getGenerator(testConfig());
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System.out.println("Found generator "+g);
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System.out.println("\n***TEST 3 - Get All Generation Algorithms ***");
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System.out.println("Algs: "+GeneratorsFactory.getProbabilityDistributionAlgorithms("./cfg/"));
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System.out.println("\n***TEST 4 - Get All Generators ***");
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System.out.println("Gens: "+GeneratorsFactory.getAllGenerators("./cfg/"));
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System.out.println("\n***TEST 5 - Get All Models to be trained ***");
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System.out.println("Models: "+ModelersFactory.getModels("./cfg/"));
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System.out.println("\n***TEST 6 - Get All Modelers ***");
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System.out.println("Models: "+ModelersFactory.getModelers("./cfg/"));
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System.out.println("\n***TEST 7- Get Model parameters ***");
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map = ModelersFactory.getModelParameters("./cfg/","HSPEN");
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System.out.println("input for HSPEN algorithm: "+map);
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System.out.println("\n***TEST 8- Get Database Default Parameters***");
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map = ProcessorsFactory.getDefaultDatabaseConfiguration("./cfg/");
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System.out.println("Database Default Values: "+map);
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System.out.println("\n***TEST 9- Get All Evaluators ***");
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System.out.println("Database Default Values: "+EvaluatorsFactory.getAllEvaluators("./cfg/"));
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System.out.println("\n***TEST 10- Get Evaluator Parameters ***");
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map = EvaluatorsFactory.getEvaluatorParameters("./cfg/","QUALITY_ANALYSIS");
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System.out.println("Database Default Values: "+map);
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System.out.println("\n***TEST 11- Get Evaluators with a config***");
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List<ComputationalAgent> eval = EvaluatorsFactory.getEvaluators(testConfigEvaluator());
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System.out.println("Database Default Values: "+eval);
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System.out.println("\n***TEST 12- Get All Supported features***");
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HashMap<String,List<String>> features = ProcessorsFactory.getAllFeatures(config);
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System.out.println("Database Default Values: "+features);
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System.out.println("\n***TEST 13- Get All Clusterers***");
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System.out.println("All Clusterers: "+ClusterersFactory.getAllClusterers("./cfg/"));
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System.out.println("\n***TEST 14- Get Clusterer Parameters ***");
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map = ClusterersFactory.getClustererParameters("./cfg/","DBSCAN");
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System.out.println("Clusterers Params: "+map);
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System.out.println("\n***TEST 15- Get Clusterers with a config***");
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// List<Clusterer> clus = ClusterersFactory.getClusterers(testConfigClusterer());
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// System.out.println("Clusterers list: "+clus);
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System.out.println("\n***TEST 16- Get All Transducerers***");
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System.out.println("All Transducers: "+TransducerersFactory.getAllTransducerers(config));
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System.out.println("\n***TEST 17- Get Transducerers Parameters ***");
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map = TransducerersFactory.getTransducerParameters(config,"BIOCLIMATE_HSPEC");
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System.out.println("Transducerers Params: "+map);
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System.out.println("\n***TEST 18- Get Transducerers with a config***");
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// List<Transducerer> trans = TransducerersFactory.getTransducerers(testConfigTrans());
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// System.out.println("Transducerers list: "+trans);
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System.out.println("\n***TEST 19- Get Agent Description***");
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String desc = ClusterersFactory.getDescription("./cfg/","DBSCAN");
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System.out.println("DESCRIPTION: "+desc);
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System.out.println("\n***TEST 20- Get USER perspective***");
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Map m = ProcessorsFactory.getAllFeaturesUser(config);
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System.out.println("USER PERSPECTIVE: "+m);
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int cores = Runtime.getRuntime().availableProcessors();
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System.out.println("Number of cores: "+cores);
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}
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private static AlgorithmConfiguration testConfigTrans() {
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AlgorithmConfiguration config = new AlgorithmConfiguration();
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config.setConfigPath("./cfg/");
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config.setPersistencePath("./");
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config.setNumberOfResources(1);
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config.setAgent("TESTTRANS");
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return config;
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}
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private static AlgorithmConfiguration testConfigClusterer() {
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AlgorithmConfiguration config = new AlgorithmConfiguration();
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config.setConfigPath("./cfg/");
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config.setPersistencePath("./");
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config.setNumberOfResources(1);
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config.setAgent("DBSCAN");
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return config;
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}
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private static AlgorithmConfiguration testConfigEvaluator() {
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AlgorithmConfiguration config = new AlgorithmConfiguration();
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config.setConfigPath("./cfg/");
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config.setPersistencePath("./");
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config.setNumberOfResources(2);
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config.setAgent("QUALITY_ANALYSIS");
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return config;
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}
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private static AlgorithmConfiguration testConfig() {
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AlgorithmConfiguration config = new AlgorithmConfiguration();
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config.setConfigPath("./cfg/");
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config.setPersistencePath("./");
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config.setNumberOfResources(2);
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config.setModel("TEST");
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config.setAgent("SIMPLE_LOCAL");
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return config;
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}
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}
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