package org.gcube.dataanalysis.executor.tests; import java.util.HashMap; import java.util.List; import java.util.Map; import org.gcube.contentmanagement.lexicalmatcher.utils.AnalysisLogger; import org.gcube.dataanalysis.ecoengine.configuration.AlgorithmConfiguration; import org.gcube.dataanalysis.ecoengine.datatypes.StatisticalType; import org.gcube.dataanalysis.ecoengine.interfaces.ComputationalAgent; import org.gcube.dataanalysis.ecoengine.interfaces.Generator; import org.gcube.dataanalysis.ecoengine.processing.factories.ClusterersFactory; import org.gcube.dataanalysis.ecoengine.processing.factories.EvaluatorsFactory; import org.gcube.dataanalysis.ecoengine.processing.factories.GeneratorsFactory; import org.gcube.dataanalysis.ecoengine.processing.factories.ModelersFactory; import org.gcube.dataanalysis.ecoengine.processing.factories.ProcessorsFactory; import org.gcube.dataanalysis.ecoengine.processing.factories.TransducerersFactory; public class TestsMetaInfo { /** * example of parallel processing on a single machine the procedure will generate a new table for a distribution on suitable species * */ public static void main(String[] args) throws Exception { System.out.println("***TEST 1 - Get Generation Algorithm Parameters***"); List map; // List map = GeneratorsFactory.getAlgorithmParameters("./cfg/","DUMMY"); // System.out.println("input for DUMMY algorithm: "+map); AlgorithmConfiguration config = new AlgorithmConfiguration(); config.setConfigPath("./cfg/"); StatisticalType type = GeneratorsFactory.getAlgorithmOutput("./cfg/","AQUAMAPS_SUITABLE"); System.out.println("output for AQUAMAPS_SUITABLE algorithm: "+type); type = ModelersFactory.getModelOutput("./cfg/","HSPEN"); System.out.println("output for HSPEN algorithm: "+type); type = EvaluatorsFactory.getEvaluatorOutput("./cfg/","HRS"); System.out.println("output for HRS algorithm: "+type); type = ClusterersFactory.getClustererOutput("./cfg/","DBSCAN"); System.out.println("output for DBSCAN algorithm: "+type); type = TransducerersFactory.getTransducerOutput(config,"BIOCLIMATE_HSPEC"); System.out.println("output for BIOCLIMATE_HSPEC algorithm: "+type); type = TransducerersFactory.getTransducerOutput(config,"BIONYM_LOCAL"); System.out.println("output for BIONYM_LOCAL algorithm: "+type); map = GeneratorsFactory.getAlgorithmParameters("./cfg/","AQUAMAPS_SUITABLE"); System.out.println("input for AQUAMAPS_SUITABLE algorithm: "+map); System.out.println("\n***TEST 2 - Get Generator***"); Generator g = GeneratorsFactory.getGenerator(testConfig()); System.out.println("Found generator "+g); System.out.println("\n***TEST 3 - Get All Generation Algorithms ***"); System.out.println("Algs: "+GeneratorsFactory.getProbabilityDistributionAlgorithms("./cfg/")); System.out.println("\n***TEST 4 - Get All Generators ***"); System.out.println("Gens: "+GeneratorsFactory.getAllGenerators("./cfg/")); System.out.println("\n***TEST 5 - Get All Models to be trained ***"); System.out.println("Models: "+ModelersFactory.getModels("./cfg/")); System.out.println("\n***TEST 6 - Get All Modelers ***"); System.out.println("Models: "+ModelersFactory.getModelers("./cfg/")); System.out.println("\n***TEST 7- Get Model parameters ***"); map = ModelersFactory.getModelParameters("./cfg/","HSPEN"); System.out.println("input for HSPEN algorithm: "+map); System.out.println("\n***TEST 8- Get Database Default Parameters***"); map = ProcessorsFactory.getDefaultDatabaseConfiguration("./cfg/"); System.out.println("Database Default Values: "+map); System.out.println("\n***TEST 9- Get All Evaluators ***"); System.out.println("Database Default Values: "+EvaluatorsFactory.getAllEvaluators("./cfg/")); System.out.println("\n***TEST 10- Get Evaluator Parameters ***"); map = EvaluatorsFactory.getEvaluatorParameters("./cfg/","QUALITY_ANALYSIS"); System.out.println("Database Default Values: "+map); System.out.println("\n***TEST 11- Get Evaluators with a config***"); List eval = EvaluatorsFactory.getEvaluators(testConfigEvaluator()); System.out.println("Database Default Values: "+eval); System.out.println("\n***TEST 12- Get All Supported features***"); HashMap> features = ProcessorsFactory.getAllFeatures(config); System.out.println("Database Default Values: "+features); System.out.println("\n***TEST 13- Get All Clusterers***"); System.out.println("All Clusterers: "+ClusterersFactory.getAllClusterers("./cfg/")); System.out.println("\n***TEST 14- Get Clusterer Parameters ***"); map = ClusterersFactory.getClustererParameters("./cfg/","DBSCAN"); System.out.println("Clusterers Params: "+map); System.out.println("\n***TEST 15- Get Clusterers with a config***"); // List clus = ClusterersFactory.getClusterers(testConfigClusterer()); // System.out.println("Clusterers list: "+clus); System.out.println("\n***TEST 16- Get All Transducerers***"); System.out.println("All Transducers: "+TransducerersFactory.getAllTransducerers(config)); System.out.println("\n***TEST 17- Get Transducerers Parameters ***"); map = TransducerersFactory.getTransducerParameters(config,"BIOCLIMATE_HSPEC"); System.out.println("Transducerers Params: "+map); System.out.println("\n***TEST 18- Get Transducerers with a config***"); // List trans = TransducerersFactory.getTransducerers(testConfigTrans()); // System.out.println("Transducerers list: "+trans); System.out.println("\n***TEST 19- Get Agent Description***"); String desc = ClusterersFactory.getDescription("./cfg/","DBSCAN"); System.out.println("DESCRIPTION: "+desc); System.out.println("\n***TEST 20- Get USER perspective***"); Map m = ProcessorsFactory.getAllFeaturesUser(config); System.out.println("USER PERSPECTIVE: "+m); int cores = Runtime.getRuntime().availableProcessors(); System.out.println("Number of cores: "+cores); } private static AlgorithmConfiguration testConfigTrans() { AlgorithmConfiguration config = new AlgorithmConfiguration(); config.setConfigPath("./cfg/"); config.setPersistencePath("./"); config.setNumberOfResources(1); config.setAgent("TESTTRANS"); return config; } private static AlgorithmConfiguration testConfigClusterer() { AlgorithmConfiguration config = new AlgorithmConfiguration(); config.setConfigPath("./cfg/"); config.setPersistencePath("./"); config.setNumberOfResources(1); config.setAgent("DBSCAN"); return config; } private static AlgorithmConfiguration testConfigEvaluator() { AlgorithmConfiguration config = new AlgorithmConfiguration(); config.setConfigPath("./cfg/"); config.setPersistencePath("./"); config.setNumberOfResources(2); config.setAgent("QUALITY_ANALYSIS"); return config; } private static AlgorithmConfiguration testConfig() { AlgorithmConfiguration config = new AlgorithmConfiguration(); config.setConfigPath("./cfg/"); config.setPersistencePath("./"); config.setNumberOfResources(2); config.setModel("TEST"); config.setAgent("SIMPLE_LOCAL"); return config; } }