212 lines
8.3 KiB
Java
212 lines
8.3 KiB
Java
package org.gcube.dataanalysis.geo.test.infra;
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import java.util.List;
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import org.gcube.contentmanagement.lexicalmatcher.utils.AnalysisLogger;
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import org.gcube.dataanalysis.ecoengine.configuration.AlgorithmConfiguration;
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import org.gcube.dataanalysis.ecoengine.datatypes.StatisticalType;
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import org.gcube.dataanalysis.ecoengine.interfaces.ComputationalAgent;
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import org.gcube.dataanalysis.ecoengine.processing.factories.TransducerersFactory;
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import org.gcube.dataanalysis.ecoengine.test.regression.Regressor;
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import org.gcube.dataanalysis.ecoengine.transducers.TimeSeriesAnalysis;
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import org.gcube.dataanalysis.ecoengine.utils.IOHelper;
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import org.gcube.dataanalysis.geo.connectors.table.TableMatrixRepresentation;
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public class TestTimeExtraction {
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// static AlgorithmConfiguration[] configs = { testTimeExtractionTable(), testTimeExtractionNetCDF(),testTimeExtractionTable2()};
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// static AlgorithmConfiguration[] configs = { testTimeExtractionNetCDF()};
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// static AlgorithmConfiguration[] configs = { testTExtractionAquamaps()};
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static AlgorithmConfiguration[] configs = { testTExtractionTemperature()};
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public static void main(String[] args) throws Exception {
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System.out.println("TEST 1");
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TimeSeriesAnalysis.display=true;
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for (int i = 0; i < configs.length; i++) {
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AnalysisLogger.getLogger().debug("Executing: "+configs[i].getAgent());
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List<ComputationalAgent> trans = null;
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trans = TransducerersFactory.getTransducerers(configs[i]);
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trans.get(0).init();
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Regressor.process(trans.get(0));
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StatisticalType st = trans.get(0).getOutput();
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AnalysisLogger.getLogger().debug("ST:" + st);
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trans = null;
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}
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}
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private static AlgorithmConfiguration testTExtractionTemperature() {
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AlgorithmConfiguration config = new AlgorithmConfiguration();
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config.setAgent("TIMEEXTRACTION");
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config.setConfigPath("./cfg/");
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config.setPersistencePath("./");
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config.setParam("DatabaseUserName","gcube");
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config.setParam("DatabasePassword","d4science2");
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config.setParam("DatabaseURL","jdbc:postgresql://localhost/testdb");
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config.setParam("DatabaseDriver","org.postgresql.Driver");
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config.setGcubeScope("/gcube/devsec/devVRE");
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config.setParam("Layer","b875403f-1e63-44e1-a1c0-2296d3e147a6");
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config.setParam("OutputTableName","testtextractiontemp2");
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config.setParam("OutputTableLabel","testtextractiontemp2");
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config.setParam("X","0");
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config.setParam("Y","0");
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config.setParam("Resolution","0.5");
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config.setParam("Z","0");
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config.setParam("SamplingFreq","-1");
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// config.setParam("MinFrequency","-1");
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// config.setParam("MaxFrequency","-1");
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// config.setParam("FFTSamples","100");
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return config;
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}
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private static AlgorithmConfiguration testTExtractionAquamaps() {
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AlgorithmConfiguration config = new AlgorithmConfiguration();
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config.setAgent("TIMEEXTRACTION");
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config.setConfigPath("./cfg/");
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config.setPersistencePath("./");
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config.setParam("DatabaseUserName","gcube");
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config.setParam("DatabasePassword","d4science2");
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config.setParam("DatabaseURL","jdbc:postgresql://localhost/testdb");
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config.setParam("DatabaseDriver","org.postgresql.Driver");
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config.setGcubeScope("/gcube/devsec/devVRE");
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config.setParam("Layer","40198411-9ceb-420f-8f39-a7e1b8128d6b");
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config.setParam("OutputTableName","testtextractionaquamaps");
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config.setParam("OutputTableLabel","testtextractionaquamaps");
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config.setParam("X","121");
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config.setParam("Y","-4");
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config.setParam("Resolution","0.5");
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config.setParam("Z","0");
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config.setParam("SamplingFreq","-1");
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config.setParam("MinFrequency","-1");
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config.setParam("MaxFrequency","-1");
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config.setParam("FrequencyError","-1");
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return config;
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}
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private static AlgorithmConfiguration testTimeExtractionNetCDF() {
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AlgorithmConfiguration config = new AlgorithmConfiguration();
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config.setAgent("TIMEEXTRACTION");
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config.setConfigPath("./cfg/");
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config.setPersistencePath("./");
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config.setParam("DatabaseUserName","gcube");
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config.setParam("DatabasePassword","d4science2");
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config.setParam("DatabaseURL","jdbc:postgresql://localhost/testdb");
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config.setParam("DatabaseDriver","org.postgresql.Driver");
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// config.setGcubeScope("/d4science.research-infrastructures.eu/gCubeApps/BiodiversityLab");
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config.setGcubeScope("/gcube/devsec/devVRE");
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// config.setParam("Layer","c565e32c-c5b3-4964-b44f-06dc620563e9");
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// config.setParam("Layer","dffa504b-dbc8-4553-896e-002549f8f5d3");
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//wind
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config.setParam("Layer","21715b2e-28de-4646-acce-d4f16b59d6d0");
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config.setParam("OutputTableName","testtimeextraction");
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config.setParam("OutputTableLabel","testtimeextraction");
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config.setParam("Z","0");
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config.setParam("X","0");
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config.setParam("Y","0");
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config.setParam("Resolution","0.5");
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config.setParam("SamplingFreq","-1");
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config.setParam("MinFrequency","-1");
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config.setParam("MaxFrequency","-1");
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config.setParam("FrequencyError","-1");
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return config;
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}
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private static AlgorithmConfiguration testTimeExtractionTable() {
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AlgorithmConfiguration config = new AlgorithmConfiguration();
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config.setAgent("TIMEEXTRACTION");
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config.setConfigPath("./cfg/");
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config.setPersistencePath("./");
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config.setParam("DatabaseUserName", "utente");
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config.setParam("DatabasePassword", "d4science");
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config.setParam("DatabaseURL", "jdbc:postgresql://statistical-manager.d.d4science.research-infrastructures.eu/testdb");
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config.setParam("DatabaseDriver", "org.postgresql.Driver");
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config.setGcubeScope("/d4science.research-infrastructures.eu/gCubeApps/BiodiversityLab");
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config.setParam("Layer","c565e32c-c5b3-4964-b44f-06dc620563e9");
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config.setParam("OutputTableName","testtimeextraction2");
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config.setParam("OutputTableLabel","testtimeextraction2");
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config.setParam("Z","0");
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config.setParam("X","-47.97");
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config.setParam("Y","43.42");
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config.setParam("Resolution","0.5");
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config.setParam("SamplingFreq","-1");
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config.setParam("MinFrequency","-1");
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config.setParam("MaxFrequency","-1");
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config.setParam("FrequencyError","-1");
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config.setParam(TableMatrixRepresentation.tableNameParameter, "generic_id037d302d_2ba0_4e43_b6e4_1a797bb91728");
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config.setParam(TableMatrixRepresentation.xDimensionColumnParameter, "x");
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config.setParam(TableMatrixRepresentation.yDimensionColumnParameter, "y");
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config.setParam(TableMatrixRepresentation.timeDimensionColumnParameter, "datetime");
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config.setParam(TableMatrixRepresentation.valueDimensionColumnParameter, "speed");
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config.setParam(TableMatrixRepresentation.filterParameter, "speed<2");
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return config;
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}
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private static AlgorithmConfiguration testTimeExtractionTable2() {
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AlgorithmConfiguration config = new AlgorithmConfiguration();
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config.setAgent("TIMEEXTRACTION");
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config.setConfigPath("./cfg/");
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config.setPersistencePath("./");
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config.setParam("DatabaseUserName", "utente");
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config.setParam("DatabasePassword", "d4science");
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config.setParam("DatabaseURL", "jdbc:postgresql://statistical-manager.d.d4science.research-infrastructures.eu/testdb");
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config.setParam("DatabaseDriver", "org.postgresql.Driver");
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config.setGcubeScope("/d4science.research-infrastructures.eu/gCubeApps/BiodiversityLab");
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config.setParam("OutputTableName","testtimeextraction2");
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config.setParam("OutputTableLabel","testtimeextraction2");
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config.setParam("Z","0");
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config.setParam("X","18.61669921875");
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config.setParam("Y","-34.1833000183105");
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config.setParam("Resolution","10");
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config.setParam("SamplingFreq","-1");
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config.setParam("MinFrequency","-1");
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config.setParam("MaxFrequency","-1");
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config.setParam("FrequencyError","-1");
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config.setParam(TableMatrixRepresentation.tableNameParameter, "occurrence_species_id0045886b_2a7c_4ede_afc4_3157c694b893");
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config.setParam(TableMatrixRepresentation.xDimensionColumnParameter, "decimallongitude");
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config.setParam(TableMatrixRepresentation.yDimensionColumnParameter, "decimallatitude");
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config.setParam(TableMatrixRepresentation.timeDimensionColumnParameter, "eventdate");
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config.setParam(TableMatrixRepresentation.valueDimensionColumnParameter, "decimallongitude");
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config.setParam(TableMatrixRepresentation.filterParameter, " ");
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return config;
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}
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}
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