package org.gcube.dataanalysis.geo.test.infra; import java.util.List; import org.gcube.contentmanagement.lexicalmatcher.utils.AnalysisLogger; import org.gcube.dataanalysis.ecoengine.configuration.AlgorithmConfiguration; import org.gcube.dataanalysis.ecoengine.datatypes.StatisticalType; import org.gcube.dataanalysis.ecoengine.interfaces.ComputationalAgent; import org.gcube.dataanalysis.ecoengine.processing.factories.TransducerersFactory; import org.gcube.dataanalysis.ecoengine.test.regression.Regressor; import org.gcube.dataanalysis.ecoengine.transducers.TimeSeriesAnalysis; import org.gcube.dataanalysis.ecoengine.utils.IOHelper; import org.gcube.dataanalysis.geo.connectors.table.TableMatrixRepresentation; public class TestTimeExtraction { // static AlgorithmConfiguration[] configs = { testTimeExtractionTable(), testTimeExtractionNetCDF(),testTimeExtractionTable2()}; // static AlgorithmConfiguration[] configs = { testTimeExtractionNetCDF()}; // static AlgorithmConfiguration[] configs = { testTExtractionAquamaps()}; static AlgorithmConfiguration[] configs = { testTExtractionTemperature()}; public static void main(String[] args) throws Exception { System.out.println("TEST 1"); TimeSeriesAnalysis.display=true; for (int i = 0; i < configs.length; i++) { AnalysisLogger.getLogger().debug("Executing: "+configs[i].getAgent()); List trans = null; trans = TransducerersFactory.getTransducerers(configs[i]); trans.get(0).init(); Regressor.process(trans.get(0)); StatisticalType st = trans.get(0).getOutput(); AnalysisLogger.getLogger().debug("ST:" + st); trans = null; } } private static AlgorithmConfiguration testTExtractionTemperature() { AlgorithmConfiguration config = new AlgorithmConfiguration(); config.setAgent("TIMEEXTRACTION"); config.setConfigPath("./cfg/"); config.setPersistencePath("./"); config.setParam("DatabaseUserName","gcube"); config.setParam("DatabasePassword","d4science2"); config.setParam("DatabaseURL","jdbc:postgresql://localhost/testdb"); config.setParam("DatabaseDriver","org.postgresql.Driver"); config.setGcubeScope("/gcube/devsec/devVRE"); config.setParam("Layer","b875403f-1e63-44e1-a1c0-2296d3e147a6"); config.setParam("OutputTableName","testtextractiontemp2"); config.setParam("OutputTableLabel","testtextractiontemp2"); config.setParam("X","0"); config.setParam("Y","0"); config.setParam("Resolution","0.5"); config.setParam("Z","0"); config.setParam("SamplingFreq","-1"); // config.setParam("MinFrequency","-1"); // config.setParam("MaxFrequency","-1"); // config.setParam("FFTSamples","100"); return config; } private static AlgorithmConfiguration testTExtractionAquamaps() { AlgorithmConfiguration config = new AlgorithmConfiguration(); config.setAgent("TIMEEXTRACTION"); config.setConfigPath("./cfg/"); config.setPersistencePath("./"); config.setParam("DatabaseUserName","gcube"); config.setParam("DatabasePassword","d4science2"); config.setParam("DatabaseURL","jdbc:postgresql://localhost/testdb"); config.setParam("DatabaseDriver","org.postgresql.Driver"); config.setGcubeScope("/gcube/devsec/devVRE"); config.setParam("Layer","40198411-9ceb-420f-8f39-a7e1b8128d6b"); config.setParam("OutputTableName","testtextractionaquamaps"); config.setParam("OutputTableLabel","testtextractionaquamaps"); config.setParam("X","121"); config.setParam("Y","-4"); config.setParam("Resolution","0.5"); config.setParam("Z","0"); config.setParam("SamplingFreq","-1"); config.setParam("MinFrequency","-1"); config.setParam("MaxFrequency","-1"); config.setParam("FrequencyError","-1"); return config; } private static AlgorithmConfiguration testTimeExtractionNetCDF() { AlgorithmConfiguration config = new AlgorithmConfiguration(); config.setAgent("TIMEEXTRACTION"); config.setConfigPath("./cfg/"); config.setPersistencePath("./"); config.setParam("DatabaseUserName","gcube"); config.setParam("DatabasePassword","d4science2"); config.setParam("DatabaseURL","jdbc:postgresql://localhost/testdb"); config.setParam("DatabaseDriver","org.postgresql.Driver"); // config.setGcubeScope("/d4science.research-infrastructures.eu/gCubeApps/BiodiversityLab"); config.setGcubeScope("/gcube/devsec/devVRE"); // config.setParam("Layer","c565e32c-c5b3-4964-b44f-06dc620563e9"); // config.setParam("Layer","dffa504b-dbc8-4553-896e-002549f8f5d3"); //wind config.setParam("Layer","21715b2e-28de-4646-acce-d4f16b59d6d0"); config.setParam("OutputTableName","testtimeextraction"); config.setParam("OutputTableLabel","testtimeextraction"); config.setParam("Z","0"); config.setParam("X","0"); config.setParam("Y","0"); config.setParam("Resolution","0.5"); config.setParam("SamplingFreq","-1"); config.setParam("MinFrequency","-1"); config.setParam("MaxFrequency","-1"); config.setParam("FrequencyError","-1"); return config; } private static AlgorithmConfiguration testTimeExtractionTable() { AlgorithmConfiguration config = new AlgorithmConfiguration(); config.setAgent("TIMEEXTRACTION"); config.setConfigPath("./cfg/"); config.setPersistencePath("./"); config.setParam("DatabaseUserName", "utente"); config.setParam("DatabasePassword", "d4science"); config.setParam("DatabaseURL", "jdbc:postgresql://statistical-manager.d.d4science.research-infrastructures.eu/testdb"); config.setParam("DatabaseDriver", "org.postgresql.Driver"); config.setGcubeScope("/d4science.research-infrastructures.eu/gCubeApps/BiodiversityLab"); config.setParam("Layer","c565e32c-c5b3-4964-b44f-06dc620563e9"); config.setParam("OutputTableName","testtimeextraction2"); config.setParam("OutputTableLabel","testtimeextraction2"); config.setParam("Z","0"); config.setParam("X","-47.97"); config.setParam("Y","43.42"); config.setParam("Resolution","0.5"); config.setParam("SamplingFreq","-1"); config.setParam("MinFrequency","-1"); config.setParam("MaxFrequency","-1"); config.setParam("FrequencyError","-1"); config.setParam(TableMatrixRepresentation.tableNameParameter, "generic_id037d302d_2ba0_4e43_b6e4_1a797bb91728"); config.setParam(TableMatrixRepresentation.xDimensionColumnParameter, "x"); config.setParam(TableMatrixRepresentation.yDimensionColumnParameter, "y"); config.setParam(TableMatrixRepresentation.timeDimensionColumnParameter, "datetime"); config.setParam(TableMatrixRepresentation.valueDimensionColumnParameter, "speed"); config.setParam(TableMatrixRepresentation.filterParameter, "speed<2"); return config; } private static AlgorithmConfiguration testTimeExtractionTable2() { AlgorithmConfiguration config = new AlgorithmConfiguration(); config.setAgent("TIMEEXTRACTION"); config.setConfigPath("./cfg/"); config.setPersistencePath("./"); config.setParam("DatabaseUserName", "utente"); config.setParam("DatabasePassword", "d4science"); config.setParam("DatabaseURL", "jdbc:postgresql://statistical-manager.d.d4science.research-infrastructures.eu/testdb"); config.setParam("DatabaseDriver", "org.postgresql.Driver"); config.setGcubeScope("/d4science.research-infrastructures.eu/gCubeApps/BiodiversityLab"); config.setParam("OutputTableName","testtimeextraction2"); config.setParam("OutputTableLabel","testtimeextraction2"); config.setParam("Z","0"); config.setParam("X","18.61669921875"); config.setParam("Y","-34.1833000183105"); config.setParam("Resolution","10"); config.setParam("SamplingFreq","-1"); config.setParam("MinFrequency","-1"); config.setParam("MaxFrequency","-1"); config.setParam("FrequencyError","-1"); config.setParam(TableMatrixRepresentation.tableNameParameter, "occurrence_species_id0045886b_2a7c_4ede_afc4_3157c694b893"); config.setParam(TableMatrixRepresentation.xDimensionColumnParameter, "decimallongitude"); config.setParam(TableMatrixRepresentation.yDimensionColumnParameter, "decimallatitude"); config.setParam(TableMatrixRepresentation.timeDimensionColumnParameter, "eventdate"); config.setParam(TableMatrixRepresentation.valueDimensionColumnParameter, "decimallongitude"); config.setParam(TableMatrixRepresentation.filterParameter, " "); return config; } }