378 lines
13 KiB
Java
378 lines
13 KiB
Java
***REMOVED***package org.gcube.dataanalysis.dataminer.poolmanager.rest;
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***REMOVED***
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***REMOVED******REMOVED***
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***REMOVED***import java.net.MalformedURLException;
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***REMOVED***import java.net.ProxySelector;
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***REMOVED******REMOVED***
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***REMOVED***import java.net.UnknownHostException;
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***REMOVED***
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***REMOVED***import javax.ws.rs.GET;
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***REMOVED***import javax.ws.rs.Path;
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***REMOVED***import javax.ws.rs.Produces;
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***REMOVED***import javax.ws.rs.QueryParam;
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***REMOVED***
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***REMOVED******REMOVED***
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***REMOVED***import org.gcube.dataanalysis.dataminer.poolmanager.datamodel.Algorithm;
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***REMOVED***import org.gcube.dataanalysis.dataminer.poolmanager.service.DataminerPoolManager;
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***REMOVED***import org.gcube.dataanalysis.dataminer.poolmanager.util.PropertiesBasedProxySelector;
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***REMOVED******REMOVED***
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***REMOVED******REMOVED***
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***REMOVED***
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***REMOVED***
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***REMOVED***@Path("/")
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***REMOVED***public class RestPoolManager implements PoolManager {
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***REMOVED***
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***REMOVED*** private static final Logger LOGGER = LoggerFactory.getLogger(RestPoolManager.class);
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***REMOVED***
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***REMOVED*** private PoolManager service = new DataminerPoolManager();
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***REMOVED***
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***REMOVED***
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***REMOVED*** @GET
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***REMOVED*** @Path("/add")
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***REMOVED*** @Produces("text/plain")
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***REMOVED*** public String addAlgorithmToVRE(
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***REMOVED*** @QueryParam("algorithm") String algorithm,
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***REMOVED*** @QueryParam("vre") String vre,
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***REMOVED*** @QueryParam("name") String name,
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***REMOVED*** @QueryParam("description") String description,
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***REMOVED*** @QueryParam("category") String category,
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***REMOVED*** @QueryParam("algorithmType") String algorithmType,
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***REMOVED*** @QueryParam("skipJava") String skipJava) throws IOException, InterruptedException {
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***REMOVED*** ***REMOVED*** TODO Auto-generated method stub
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***REMOVED*** LOGGER.debug("Adding algorithm =" + algorithm + " to VRE =" + vre);
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***REMOVED*** Algorithm algo = service.extractAlgorithm(algorithm);
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***REMOVED***
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***REMOVED*** if (algo.getCategory() == null){
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***REMOVED*** algo.setCategory(category);
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***REMOVED*** ***REMOVED*** else category = algo.getCategory();
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***REMOVED***
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***REMOVED*** if (algo.getAlgorithmType() == null){
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***REMOVED*** algo.setAlgorithmType(algorithmType);
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***REMOVED*** ***REMOVED*** else algorithmType = algo.getCategory();
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***REMOVED***
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***REMOVED*** if (algo.getSkipJava() == null){
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***REMOVED*** algo.setSkipJava(skipJava);
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***REMOVED*** ***REMOVED*** else skipJava = algo.getSkipJava();
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***REMOVED***
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***REMOVED*** if (algo.getName() == null){
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***REMOVED*** algo.setCategory(name);
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***REMOVED*** ***REMOVED*** else name = algo.getName();
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***REMOVED***
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***REMOVED*** if (algo.getDescription() == null){
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***REMOVED*** algo.setDescription(description);;
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***REMOVED*** ***REMOVED*** else description = algo.getDescription();
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***REMOVED***
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***REMOVED*** return service.addAlgorithmToVRE(algo, vre);
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***REMOVED******REMOVED***
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***REMOVED***
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***REMOVED***
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***REMOVED*** @GET
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***REMOVED*** @Path("/log")
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***REMOVED*** @Produces("text/plain")
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***REMOVED*** public String getLogById(@QueryParam("logUrl") String logUrl) throws IOException {
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***REMOVED*** ***REMOVED*** TODO Auto-generated method stub
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***REMOVED*** LOGGER.debug("Returning Log =" + logUrl);
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***REMOVED*** return service.getScriptFromURL(service.getURLfromWorkerLog(logUrl));
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***REMOVED******REMOVED***
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***REMOVED***
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***REMOVED***
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***REMOVED***
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***REMOVED***
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***REMOVED***
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***REMOVED*** @Override
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***REMOVED*** public Algorithm extractAlgorithm(String url) throws IOException {
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***REMOVED*** ***REMOVED*** TODO Auto-generated method stub
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***REMOVED*** return null;
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***REMOVED******REMOVED***
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***REMOVED***
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***REMOVED***
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***REMOVED*** public static void main(String[] args) throws IOException, InterruptedException {
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***REMOVED*** RestPoolManager a = new RestPoolManager();
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***REMOVED*** ***REMOVED***System.out.println(System.getProperty("user.home")+File.separator+"/gcube/dataminer-pool-manager");
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***REMOVED***
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***REMOVED***
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***REMOVED*** ***REMOVED***ProxySelector.setDefault(new PropertiesBasedProxySelector("/home/ngalante/.proxy-settings"));
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***REMOVED***
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***REMOVED*** ScopeProvider.instance.set("/gcube/devNext/NextNext");
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***REMOVED*** a.addAlgorithmToVRE(
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***REMOVED*** "http:***REMOVED***data.d4science.org/S2h1RHZGd0JpWnBjZk9qTytQTndqcDRLVHNrQUt6QjhHbWJQNStIS0N6Yz0",
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***REMOVED*** "/gcube/devNext/NextNext",
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***REMOVED*** null, null, "test", "transducerers", "N");
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***REMOVED***
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***REMOVED*** ***REMOVED***System.out.println(a.getLogById("34ac474d-b9df-4929-87e1-2a0ae26cf898"));
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***REMOVED******REMOVED***
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***REMOVED***
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***REMOVED***
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***REMOVED*** @Override
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***REMOVED*** public void getLogId(Algorithm algo, String vre) {
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***REMOVED*** ***REMOVED*** TODO Auto-generated method stub
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***REMOVED***
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***REMOVED******REMOVED***
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***REMOVED***
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***REMOVED***
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***REMOVED*** @Override
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***REMOVED*** public String getScriptFromURL(URL logId) throws IOException {
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***REMOVED*** ***REMOVED*** TODO Auto-generated method stub
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***REMOVED*** return null;
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***REMOVED******REMOVED***
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***REMOVED***
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***REMOVED***
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***REMOVED*** @Override
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***REMOVED*** public String addAlgorithmToVRE(Algorithm algo, String vre) throws IOException, InterruptedException {
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***REMOVED*** ***REMOVED*** TODO Auto-generated method stub
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***REMOVED*** return null;
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***REMOVED******REMOVED***
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***REMOVED***
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***REMOVED***
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***REMOVED*** @Override
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***REMOVED*** public URL getURLfromWorkerLog(String logUrl) throws MalformedURLException, UnknownHostException {
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***REMOVED*** ***REMOVED*** TODO Auto-generated method stub
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***REMOVED*** return null;
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***REMOVED******REMOVED***
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***REMOVED***
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***REMOVED***
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***REMOVED***
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***REMOVED***
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***REMOVED***
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***REMOVED***
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***REMOVED***
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***REMOVED***
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***REMOVED***
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***REMOVED***
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***REMOVED******REMOVED***
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package org.gcube.dataanalysis.dataminer.poolmanager.rest;
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import java.awt.color.ICC_ColorSpace;
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***REMOVED***
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import java.net.MalformedURLException;
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import java.net.ProxySelector;
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***REMOVED***
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import java.net.UnknownHostException;
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***REMOVED***
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***REMOVED***
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import java.util.Random;
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import java.util.Set;
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import java.util.UUID;
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import javax.ws.rs.DefaultValue;
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import javax.ws.rs.GET;
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import javax.ws.rs.Path;
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import javax.ws.rs.Produces;
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import javax.ws.rs.QueryParam;
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import org.apache.commons.lang.math.RandomUtils;
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***REMOVED***
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import org.gcube.dataanalysis.dataminer.poolmanager.clients.ISClient;
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import org.gcube.dataanalysis.dataminer.poolmanager.datamodel.Algorithm;
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import org.gcube.dataanalysis.dataminer.poolmanager.datamodel.Dependency;
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import org.gcube.dataanalysis.dataminer.poolmanager.service.DataminerPoolManager;
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import org.gcube.dataanalysis.dataminer.poolmanager.util.PropertiesBasedProxySelector;
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***REMOVED***
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***REMOVED***
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import org.tmatesoft.svn.core.SVNException;
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@Path("/")
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public class RestPoolManager implements PoolManager {
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private static final Logger LOGGER = LoggerFactory.getLogger(RestPoolManager.class);
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private PoolManager service = new DataminerPoolManager();
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/*
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* /scopes/<scope> POST ***REMOVED*** add an algorithm to all dataminers in the scope
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* /hosts/<hostname> POST ***REMOVED*** add an algorithm to the given host
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*/
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@GET
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@Path("/scopes/add")
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@Produces("text/plain")
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public String addAlgorithmToVRE(
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@QueryParam("algorithm") String algorithm,
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@QueryParam("name") String name,
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@QueryParam("description") String description,
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@QueryParam("category") String category,
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@DefaultValue("transducerers") @QueryParam("algorithmType") String algorithmType,
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@DefaultValue("N") @QueryParam("skipJava") String skipJava,
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@DefaultValue("false") @QueryParam("publish") boolean publish,
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@DefaultValue("false") @QueryParam("updateSVN") boolean updateSVN)
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throws IOException, InterruptedException, SVNException {
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Algorithm algo = this.getAlgorithm(algorithm, /*vre*/null, null, name, description, category, algorithmType, skipJava);
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***REMOVED*** publish algo
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if (publish) {
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service.addAlgToIs(algo);
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***REMOVED***
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return service.addAlgorithmToVRE(algo, ScopeProvider.instance.get(),updateSVN);
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***REMOVED***
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@GET
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@Path("/hosts/add")
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@Produces("text/plain")
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public String addAlgorithmToHost(
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@QueryParam("algorithm") String algorithm,
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@QueryParam("hostname") String hostname,
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@QueryParam("name") String name,
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@QueryParam("description") String description,
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@QueryParam("category") String category,
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@DefaultValue("transducerers") @QueryParam("algorithmType") String algorithmType,
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@DefaultValue("N") @QueryParam("skipJava") String skipJava,
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@DefaultValue("false") @QueryParam("publish") boolean publish,
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@DefaultValue("false") @QueryParam("updateSVN") boolean updateSVN)
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throws IOException, InterruptedException, SVNException {
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Algorithm algo = this.getAlgorithm(algorithm, null, hostname, name, description, category, algorithmType,
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skipJava);
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***REMOVED*** publish algo
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if (publish) {
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service.addAlgToIs(algo);
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***REMOVED***
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return service.addAlgorithmToHost(algo, hostname,updateSVN);
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***REMOVED***
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private Algorithm getAlgorithm(String algorithm, String vre, String hostname, String name, String description,
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String category, String algorithmType, String skipJava) throws IOException, InterruptedException {
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LOGGER.debug("Adding algorithm =" + algorithm + " to VRE =" + ScopeProvider.instance.get());
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Algorithm algo = service.extractAlgorithm(algorithm);
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if (algo.getCategory() == null) {
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algo.setCategory(category);
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***REMOVED*** else
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algo.setCategory(algo.getCategory());
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if (algo.getAlgorithmType() == null) {
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algo.setAlgorithmType(algorithmType);
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***REMOVED*** else
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algo.setAlgorithmType(algo.getCategory());
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if (algo.getSkipJava() == null) {
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algo.setSkipJava(skipJava);
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***REMOVED*** else
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algo.setSkipJava(algo.getSkipJava());
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if (algo.getName() == null) {
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algo.setName(name);
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***REMOVED*** else
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algo.setName(algo.getName());
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if (algo.getDescription() == null) {
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algo.setDescription(description);
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;
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***REMOVED*** else
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algo.setDescription(algo.getDescription());
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return algo;
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***REMOVED***
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@GET
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@Path("/log")
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@Produces("text/plain")
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public String getLogById(@QueryParam("logUrl") String logUrl) throws IOException {
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***REMOVED*** TODO Auto-generated method stub
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LOGGER.debug("Returning Log =" + logUrl);
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return service.getScriptFromURL(service.getURLfromWorkerLog(logUrl));
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***REMOVED***
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@Override
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public Algorithm extractAlgorithm(String url) throws IOException {
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***REMOVED*** TODO Auto-generated method stub
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return null;
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***REMOVED***
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public static void main(String[] args) throws IOException, InterruptedException, SVNException {
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***REMOVED*** System.out.println(System.getProperty("user.home")+File.separator+"/gcube/dataminer-pool-manager");
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***REMOVED*** ProxySelector.setDefault(new
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***REMOVED*** PropertiesBasedProxySelector("/home/ngalante/.proxy-settings"));
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ScopeProvider.instance.set("/gcube/preprod/preVRE");
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***REMOVED*** PoolManager aa = new DataminerPoolManager();
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***REMOVED*** System.out.println(aa.getAlgoById("ICHTHYOP_MODEL_ONE_BY_ONE@3141d3aa-5f93-409f-b6f8-9fae0a6c0ee3"));
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***REMOVED*** System.out.println(aa.getAlgoFromIs());
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RestPoolManager a = new RestPoolManager();
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***REMOVED*** a.addAlgorithmToVRE(
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***REMOVED*** "http:***REMOVED***data.d4science.org/TVc0TW9Ud1FjYlppK0NHd2pvU0owNmRFWHE4OW4xSGNHbWJQNStIS0N6Yz0",
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***REMOVED*** "test",
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***REMOVED*** null,
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***REMOVED*** null,
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***REMOVED*** "N",
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***REMOVED*** "transducerers",
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***REMOVED*** true,
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***REMOVED*** false);
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a.addAlgorithmToHost(
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"http:***REMOVED***data.d4science.org/MnovRjZIdGV5WlB0WXE5NVNaZnRoRVg0SU8xZWpWQlFHbWJQNStIS0N6Yz0",
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"dataminer1-pre.d4science.org",
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"ICHTHYOP_MODEL_ONE_BY_ONE", null, "ICHTHYOP_MODEL", "transducerers",
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"N",false, false);
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***REMOVED*** PoolManager aa = new DataminerPoolManager();
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***REMOVED*** List<String> ls = new LinkedList<String>();
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***REMOVED*** String afa = "test";
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***REMOVED*** ls.add(afa);
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***REMOVED***
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***REMOVED*** System.out.println(aa.updateSVN("r_deb_pkgs.txt", ls));
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***REMOVED***
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@Override
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public void getLogId(Algorithm algo, String vre) {
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***REMOVED*** TODO Auto-generated method stub
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***REMOVED***
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@Override
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public String getScriptFromURL(URL logId) throws IOException {
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***REMOVED*** TODO Auto-generated method stub
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return null;
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***REMOVED***
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@Override
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public URL getURLfromWorkerLog(String logUrl) throws MalformedURLException, UnknownHostException {
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***REMOVED*** TODO Auto-generated method stub
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return null;
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***REMOVED***
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@Override
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public void addAlgToIs(Algorithm algo) {
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***REMOVED*** TODO Auto-generated method stub
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***REMOVED***
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@Override
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public Set<Algorithm> getAlgoFromIs() {
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***REMOVED*** TODO Auto-generated method stub
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return null;
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***REMOVED***
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@Override
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public List<String> updateSVN(String file, List<String> ldep) throws SVNException {
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***REMOVED*** TODO Auto-generated method stub
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return null;
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***REMOVED***
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@Override
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public String addAlgorithmToVRE(Algorithm algo, String vre, boolean svn) throws IOException, InterruptedException {
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***REMOVED*** TODO Auto-generated method stub
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return null;
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***REMOVED***
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@Override
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public String addAlgorithmToHost(Algorithm algo, String host, boolean svn)
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throws IOException, InterruptedException {
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***REMOVED*** TODO Auto-generated method stub
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return null;
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***REMOVED***
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***REMOVED***
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