325 lines
12 KiB
Java
Executable File
325 lines
12 KiB
Java
Executable File
package org.gcube.dataanalysis.dataminer.poolmanager.ansiblebridge;
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import java.io.File;
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***REMOVED***
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import java.util.Collection;
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***REMOVED***
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import java.util.Map;
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***REMOVED***
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import java.util.TreeMap;
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import java.util.TreeSet;
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import java.util.UUID;
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import java.util.Vector;
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import org.gcube.dataanalysis.dataminer.poolmanager.ansible.AnsibleWorker;
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import org.gcube.dataanalysis.dataminer.poolmanager.ansible.model.AnsibleHost;
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import org.gcube.dataanalysis.dataminer.poolmanager.ansible.model.Inventory;
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import org.gcube.dataanalysis.dataminer.poolmanager.ansible.model.Playbook;
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import org.gcube.dataanalysis.dataminer.poolmanager.ansible.model.Role;
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import org.gcube.dataanalysis.dataminer.poolmanager.ansiblebridge.template.AlgorithmPackage;
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import org.gcube.dataanalysis.dataminer.poolmanager.ansiblebridge.template.CranDependencyPackage;
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import org.gcube.dataanalysis.dataminer.poolmanager.ansiblebridge.template.CustomDependencyPackage;
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import org.gcube.dataanalysis.dataminer.poolmanager.ansiblebridge.template.CustomRoleManager;
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import org.gcube.dataanalysis.dataminer.poolmanager.ansiblebridge.template.OSDependencyPackage;
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import org.gcube.dataanalysis.dataminer.poolmanager.ansiblebridge.template.StaticRoleManager;
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import org.gcube.dataanalysis.dataminer.poolmanager.ansiblebridge.template.TemplateManager;
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***REMOVED***
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import org.gcube.dataanalysis.dataminer.poolmanager.datamodel.AlgorithmSet;
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import org.gcube.dataanalysis.dataminer.poolmanager.datamodel.Cluster;
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import org.gcube.dataanalysis.dataminer.poolmanager.datamodel.Dependency;
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import org.gcube.dataanalysis.dataminer.poolmanager.datamodel.Host;
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import org.gcube.dataanalysis.dataminer.poolmanager.datamodel.comparator.HostComparator;
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public class AnsibleBridge ***REMOVED***
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***REMOVED*** private static final org.slf4j.Logger LOGGER =
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***REMOVED*** LoggerFactory.getLogger(AnsibleBridge.class);
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private String dpmRoot;
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***REMOVED*** public AnsibleBridge() ***REMOVED***
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***REMOVED*** this(System.getProperty("user.home")+File.separator+"dataminer-pool-manager");
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***REMOVED*** ***REMOVED***this(System.getProperty("/home/gcube/dataminer-pool-manager"));
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***REMOVED***
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***REMOVED*** ***REMOVED***
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public AnsibleBridge(String root) ***REMOVED***
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this.dpmRoot = root;
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this.ensureServiceRoot();
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***REMOVED***
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private void ensureServiceRoot() ***REMOVED***
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***REMOVED*** generate root
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new File(dpmRoot).mkdirs();
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***REMOVED*** 'template' is for template roles
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***REMOVED*** this.getTemplatesDir().mkdirs();
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***REMOVED*** 'static' is for custom roles
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***REMOVED*** this.getCustomDir().mkdirs();
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***REMOVED*** 'work' is for temporary working directories
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this.getWorkDir().mkdirs();
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***REMOVED***
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private File getWorkDir() ***REMOVED***
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return new File(this.dpmRoot, "work");
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***REMOVED***
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***REMOVED*** private String getTemplatesDir() ***REMOVED***
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***REMOVED*** String input = null;
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***REMOVED*** input =
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***REMOVED*** AnsibleBridge.class.getClassLoader().getResource("templates").getPath();
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***REMOVED*** return input;
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***REMOVED*** ***REMOVED***
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***REMOVED***
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***REMOVED***
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***REMOVED*** private String getCustomDir() ***REMOVED***
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***REMOVED*** String input = null;
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***REMOVED*** input =
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***REMOVED*** AnsibleBridge.class.getClassLoader().getResource("custom").getPath();
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***REMOVED*** return input;
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***REMOVED*** ***REMOVED***
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public AnsibleWorker createWorker(Algorithm algorithm, Cluster dataminerCluster,
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boolean includeAlgorithmDependencies, String user) throws IOException ***REMOVED***
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File workerRoot = new File(this.getWorkDir(), UUID.randomUUID().toString());
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AnsibleWorker worker = new AnsibleWorker(workerRoot);
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List<Role> algoRoles = new Vector<>();
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***REMOVED*** add algorithms and dependencies to the worker
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for (Role r : this.generateRoles(algorithm, includeAlgorithmDependencies)) ***REMOVED***
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algoRoles.add(r);
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worker.addRole(r);
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***REMOVED***
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***REMOVED*** to comment the for in case of just install algo
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if (includeAlgorithmDependencies) ***REMOVED***
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for (Dependency d : algorithm.getDependencies()) ***REMOVED***
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for (Role r : this.generateRoles(d)) ***REMOVED***
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worker.addRole(r);
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***REMOVED***
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***REMOVED***
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***REMOVED***
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***REMOVED*** add static roles
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for (Role r : this.getStaticRoleManager().getStaticRoles()) ***REMOVED***
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worker.addRole(r);
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***REMOVED***
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***REMOVED*** generate the inventory
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Inventory inventory = new Inventory();
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for (Host h : dataminerCluster.getHosts()) ***REMOVED***
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AnsibleHost ah = new AnsibleHost(h.getName());
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inventory.addHost(ah, "universe");
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inventory.addHost(ah, "d4science");
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***REMOVED***
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worker.setInventory(inventory);
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***REMOVED*** generate the playbook
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Playbook playbook = new Playbook();
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playbook.setRemote_user(user);
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playbook.applyTo("universe");
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for (Role r : algoRoles) ***REMOVED***
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***REMOVED*** add only 'add' roles
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if (!r.getName().endsWith("remove")) ***REMOVED***
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playbook.addRole(r.getName());
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***REMOVED***
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***REMOVED***
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worker.setPlaybook(playbook);
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return worker;
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***REMOVED***
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public void printInventoryByDomainAndSets(Collection<Cluster> clusters) ***REMOVED***
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Map<String, Set<Host>> inventory = new TreeMap<>();
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for (Cluster cluster : clusters) ***REMOVED***
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for (AlgorithmSet as : cluster.getAlgorithmSets()) ***REMOVED***
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String asName = as.getName();
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for (Host h : cluster.getHosts()) ***REMOVED***
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String domain = h.getDomain().getName();
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String key = String.format("[%s@%s]", asName, domain);
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Set<Host> hosts = inventory.get(key);
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if (hosts == null) ***REMOVED***
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hosts = new TreeSet<>(new HostComparator());
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inventory.put(key, hosts);
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***REMOVED***
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hosts.add(h);
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***REMOVED***
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***REMOVED***
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***REMOVED***
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for (String key : inventory.keySet()) ***REMOVED***
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System.out.println(key);
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Collection<Host> hosts = inventory.get(key);
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for (Host h : hosts) ***REMOVED***
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System.out.println(h.getName() + "." + h.getDomain().getName());
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***REMOVED***
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System.out.println();
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***REMOVED***
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***REMOVED***
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public void printInventoryBySets(Collection<Cluster> clusters) ***REMOVED***
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Map<String, Set<Host>> inventory = new TreeMap<>();
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for (Cluster cluster : clusters) ***REMOVED***
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for (AlgorithmSet as : cluster.getAlgorithmSets()) ***REMOVED***
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String asName = as.getName();
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for (Host h : cluster.getHosts()) ***REMOVED***
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String key = String.format("[%s]", asName);
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Set<Host> hosts = inventory.get(key);
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if (hosts == null) ***REMOVED***
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hosts = new TreeSet<>(new HostComparator());
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inventory.put(key, hosts);
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***REMOVED***
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hosts.add(h);
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***REMOVED***
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***REMOVED***
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***REMOVED***
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for (String key : inventory.keySet()) ***REMOVED***
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System.out.println(key);
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Collection<Host> hosts = inventory.get(key);
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for (Host h : hosts) ***REMOVED***
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System.out.println(h.getName() + "." + h.getDomain().getName());
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***REMOVED***
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System.out.println();
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***REMOVED***
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***REMOVED***
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***REMOVED*** public AnsibleWorker applyAlgorithmSetToCluster(AlgorithmSet as, Cluster
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***REMOVED*** cluster, /*boolean updateSVN,*/ boolean test) throws IOException,
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***REMOVED*** InterruptedException, SVNException ***REMOVED***
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***REMOVED***
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***REMOVED***
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***REMOVED*** return applyAlgorithmSetToCluster
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***REMOVED*** (as,cluster,UUID.randomUUID().toString(),/*updateSVN,*/ test);
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***REMOVED*** ***REMOVED***
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***REMOVED*** public AnsibleWorker applyAlgorithmSetToCluster(AlgorithmSet as, Cluster
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***REMOVED*** cluster,String uuid, /*boolean updateSVN,*/ boolean test) throws
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***REMOVED*** IOException, InterruptedException, SVNException ***REMOVED***
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***REMOVED*** AnsibleWorker worker = new AnsibleWorker(new File(this.getWorkDir(),
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***REMOVED*** uuid));
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***REMOVED***
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***REMOVED***
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***REMOVED*** List<Role> algoRoles = new Vector<>();
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***REMOVED***
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***REMOVED*** ***REMOVED*** add algorithms and dependencies to the worker
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***REMOVED*** for (Algorithm a : as.getAlgorithms()) ***REMOVED***
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***REMOVED*** for (Role r : this.generateRoles(a)) ***REMOVED***
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***REMOVED*** algoRoles.add(r);
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***REMOVED*** worker.addRole(r);
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***REMOVED*** ***REMOVED***
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***REMOVED*** ***REMOVED***to comment the for in case of just install algo
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***REMOVED*** if(test)***REMOVED***
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***REMOVED*** for (Dependency d : a.getDependencies()) ***REMOVED***
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***REMOVED*** for (Role r : this.generateRoles(d)) ***REMOVED***
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***REMOVED*** worker.addRole(r);
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***REMOVED*** ***REMOVED***
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***REMOVED*** ***REMOVED***
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***REMOVED*** ***REMOVED***
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***REMOVED*** ***REMOVED***
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***REMOVED***
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***REMOVED*** ***REMOVED*** add static roles
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***REMOVED*** for(Role r:this.getStaticRoleManager().getStaticRoles()) ***REMOVED***
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***REMOVED*** worker.addRole(r);
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***REMOVED*** ***REMOVED***
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***REMOVED***
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***REMOVED*** ***REMOVED*** generate the inventory
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***REMOVED*** Inventory inventory = new Inventory();
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***REMOVED*** for (Host h : cluster.getHosts()) ***REMOVED***
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***REMOVED*** AnsibleHost ah = new AnsibleHost(h.getName());
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***REMOVED*** inventory.addHost(ah, "universe");
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***REMOVED*** inventory.addHost(ah, "d4science");
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***REMOVED*** ***REMOVED***
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***REMOVED*** worker.setInventory(inventory);
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***REMOVED***
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***REMOVED*** ***REMOVED*** generate the playbook
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***REMOVED*** Playbook playbook = new Playbook();
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***REMOVED*** if(test)***REMOVED***
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***REMOVED*** playbook.setRemote_user("root");***REMOVED***
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***REMOVED*** playbook.setRemote_user("gcube");
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***REMOVED*** playbook.applyTo("universe");
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***REMOVED*** for(Role r:algoRoles) ***REMOVED***
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***REMOVED*** ***REMOVED*** add only 'add' roles
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***REMOVED*** if(!r.getName().endsWith("remove")) ***REMOVED***
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***REMOVED*** playbook.addRole(r.getName());
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***REMOVED*** ***REMOVED***
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***REMOVED*** ***REMOVED***
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***REMOVED***
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***REMOVED*** worker.setPlaybook(playbook);
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***REMOVED***
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***REMOVED*** ***REMOVED*** execute and save log locally
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***REMOVED*** ***REMOVED***PrintStream console = System.out;
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***REMOVED*** File path = new File(worker.getWorkdir() + File.separator + "logs");
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***REMOVED*** path.mkdirs();
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***REMOVED*** File n = new File(path + File.separator + worker.getWorkerId());
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***REMOVED*** FileOutputStream fos = new FileOutputStream(n);
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***REMOVED*** PrintStream ps = new PrintStream(fos);
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***REMOVED***
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***REMOVED*** ***REMOVED***System.setErr(console);
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***REMOVED***
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***REMOVED*** worker.apply(as,ps,test);
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***REMOVED*** ***REMOVED***System.setOut(console);
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***REMOVED*** ***REMOVED***worker.apply();
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***REMOVED*** System.out.println("Log stored to to " + n.getAbsolutePath());
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***REMOVED***
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***REMOVED*** ***REMOVED*** destroy the worker
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***REMOVED*** worker.destroy();
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***REMOVED*** return worker;
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***REMOVED*** ***REMOVED***
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private TemplateManager getTemplateManager() ***REMOVED***
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return new TemplateManager();
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***REMOVED***
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private CustomRoleManager getCustomRoleManager() ***REMOVED***
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return new CustomRoleManager();
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***REMOVED***
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private StaticRoleManager getStaticRoleManager() ***REMOVED***
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return new StaticRoleManager();
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***REMOVED***
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***REMOVED****
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* Generate all roles for this dependency
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*
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* @param dep
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* Dependency
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* @return Collection of Roles
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***REMOVED***
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public Collection<Role> generateRoles(Dependency dep) ***REMOVED***
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Collection<Role> roles = new Vector<>();
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if ("os".equalsIgnoreCase(dep.getType())) ***REMOVED***
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OSDependencyPackage pkg = new OSDependencyPackage(dep);
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if (pkg != null) ***REMOVED***
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roles.addAll(pkg.getRoles(this.getTemplateManager()));
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***REMOVED***
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***REMOVED*** else if ("custom".equalsIgnoreCase(dep.getType())) ***REMOVED***
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CustomDependencyPackage pkg = new CustomDependencyPackage(dep);
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if (pkg != null) ***REMOVED***
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roles.addAll(pkg.getRoles(this.getCustomRoleManager()));
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***REMOVED***
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***REMOVED*** else if ("github".equalsIgnoreCase(dep.getType())) ***REMOVED***
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CranDependencyPackage pkg = new CranDependencyPackage(dep);
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if (pkg != null) ***REMOVED***
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roles.addAll(pkg.getRoles(this.getTemplateManager()));
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***REMOVED***
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***REMOVED*** else if ("cran".equalsIgnoreCase(dep.getType())) ***REMOVED***
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CranDependencyPackage pkg = new CranDependencyPackage(dep);
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if (pkg != null) ***REMOVED***
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roles.addAll(pkg.getRoles(this.getTemplateManager()));
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***REMOVED***
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***REMOVED***
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return roles;
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***REMOVED***
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public Collection<Role> generateRoles(Algorithm a, boolean includeAlgorithmDependencies) ***REMOVED***
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AlgorithmPackage pkg = new AlgorithmPackage(a, includeAlgorithmDependencies);
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return pkg.getRoles(this.getTemplateManager());
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***REMOVED***
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***REMOVED***
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