Enrico Ottonello
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41de8fb785
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added ped test with doi citation; fix pmid pid type
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2022-05-13 12:27:40 +02:00 |
Enrico Ottonello
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6fa9624c29
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merge with beta for bioschemas
Merge branch 'beta' of https://code-repo.d4science.org/D-Net/dnet-hadoop into beta_bioschema
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2022-05-11 10:56:03 +02:00 |
Miriam Baglioni
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89657a0b78
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[UsageCount] refactoring
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2022-05-09 14:43:27 +02:00 |
Miriam Baglioni
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a056f59c6e
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[UsageCount] make it as an action set as it should be, plus changed the test to make them work as well now
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2022-05-09 12:51:35 +02:00 |
Miriam Baglioni
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5feae77937
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[Measures] last changes to accomodate tests
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2022-04-20 15:13:09 +02:00 |
Miriam Baglioni
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869407c6e2
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[Measures] added new measure (usagecounts) as action set. Measure added at the level of the result. Ref #7587
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2022-04-20 14:02:05 +02:00 |
Enrico Ottonello
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9a0ca0296a
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added mobidb constants configuration and test
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2022-04-07 13:17:50 +02:00 |
Enrico Ottonello
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a203c33693
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added disprot constants configuration
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2022-04-06 12:48:24 +02:00 |
Claudio Atzori
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8c457f1b2c
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conflicts resolved, merged from beta
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2022-04-06 10:27:52 +02:00 |
Sandro La Bruzzo
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1b11010169
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minor fix
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2022-03-29 10:59:14 +02:00 |
Enrico Ottonello
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afe84c4244
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added subjects to oaf generation
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2022-03-18 18:10:39 +01:00 |
Enrico Ottonello
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e53a606afc
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added date of collection, resource type as workflow parameter
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2022-03-15 17:36:48 +01:00 |
Enrico Ottonello
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29ee1b9d82
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added datasource key to workflow parameter to properly choose collected from and id values
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2022-03-03 12:31:29 +01:00 |
Enrico Ottonello
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f28d7e3b9d
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added spark dataset creation
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2022-03-02 12:12:37 +01:00 |
Enrico Ottonello
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8f281846a4
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update test file
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2022-02-28 13:37:53 +01:00 |
Enrico Ottonello
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2f5caef77b
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resolution of generated relations url to uniprot and pubmed datasources
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2022-02-24 16:59:50 +01:00 |
Enrico Ottonello
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446f81ee60
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wf to generate oaf from bioschema json datacite
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2022-02-22 11:42:57 +01:00 |
Claudio Atzori
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401dd38074
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code formatting
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2022-02-18 15:19:15 +01:00 |
Claudio Atzori
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89c7313fc5
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Merge branch 'beta' into hierarchical_orgs_relations
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2022-02-17 10:30:04 +01:00 |
Miriam Baglioni
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be64055cfe
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[OpenCitation] changed the name of destination folders
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2022-02-14 15:49:44 +01:00 |
Miriam Baglioni
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759ed519f2
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[OpenCitation] added logic to avoid the genration of self citations relations
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2022-02-08 16:15:34 +01:00 |
Miriam Baglioni
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b071f8e415
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[OpenCitation] change to extract in json format each folder just onece
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2022-02-08 15:37:28 +01:00 |
Miriam Baglioni
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fbc28ee8c3
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[OpenCitation] change the integration logic to consider dois with commas inside
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2022-02-07 18:32:08 +01:00 |
Miriam Baglioni
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73eba34d42
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[UnresolvedEntities] Changed the way to merge the unresolved because the new merge removed the dataInfo from the merged result. Added also data info for subjects
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2022-02-01 08:38:41 +01:00 |
Miriam Baglioni
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a75fb8c47a
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[BipFinderInstanceLevel] change pom to align to the dhp-schema release 2.10.24 and refactoring
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2022-01-12 18:06:26 +01:00 |
Miriam Baglioni
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e7d5a39c03
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[BipFinderInstanceLevel] added tests in test class
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2022-01-12 17:25:04 +01:00 |
Claudio Atzori
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dcd282977c
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pulled from beta
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2022-01-11 16:59:41 +01:00 |
Claudio Atzori
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4f212652ca
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scalafmt: code formatting
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2022-01-11 16:57:48 +01:00 |
Miriam Baglioni
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92fd69e25d
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[SDG-FOS] alternative way to get input data to avoid OOM error while getting csv
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2022-01-03 15:23:06 +01:00 |
Miriam Baglioni
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7a1b440413
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[SDG] logic to create unresolved entities out of SDG input. This changes also some classes related to FOS to reuse the same code. The code under createunresolvedentities create results with the merged update of the the inputs provided (bip at the level of the isntance, fos and sdg for subjects)
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2021-12-23 13:24:28 +01:00 |
Miriam Baglioni
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10579c0dd0
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[FOS]fixed doi value in test
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2021-12-22 23:10:16 +01:00 |
Miriam Baglioni
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6116fc5d40
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[FOS]added logic to include only different subjects. Test refactoring and extention
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2021-12-22 23:04:22 +01:00 |
Miriam Baglioni
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b81efb6a9d
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[FOS]changed the mapping between the csv and the model. Changed Test classes and resources
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2021-12-22 21:40:35 +01:00 |
Miriam Baglioni
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34ac56565d
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refactoring
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2021-12-22 16:28:11 +01:00 |
Miriam Baglioni
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2c126ed014
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[BipFinder] create unresolved entities with measures at the level of the instance
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2021-12-22 16:03:41 +01:00 |
Miriam Baglioni
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0807fdb65a
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[BipFinder] remove not needed resources
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2021-12-22 15:37:00 +01:00 |
Miriam Baglioni
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22d4b5619b
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[BipFinder Result] last changes to test and resources files
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2021-12-14 14:54:13 +01:00 |
Miriam Baglioni
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4eb8276493
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-
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2021-12-14 11:12:17 +01:00 |
Miriam Baglioni
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d9836f0cf3
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[OpenCitations] fixed test when executed one after the other
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2021-12-06 15:27:09 +01:00 |
Sandro La Bruzzo
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7af0bbd0b1
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[scala-refactor] Module dhp-aggregation:
Moved all scala source into src/main/scala and src/test/scala
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2021-12-06 11:26:36 +01:00 |
Sandro La Bruzzo
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f7011b90d8
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format code
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2021-12-03 11:15:09 +01:00 |
Sandro La Bruzzo
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feea154e89
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remove working dir after test
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2021-11-25 11:02:38 +01:00 |
Sandro La Bruzzo
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028a8acad8
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add test resources
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2021-11-25 10:54:47 +01:00 |
Sandro La Bruzzo
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2164a2a889
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Datacite: Code Refactor generated a general SparkApplication Scala where all the spark scala have to inherit
Commented a little the Datacite transformation code
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2021-11-25 10:54:13 +01:00 |
Sandro La Bruzzo
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a7cf277d98
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Datacite: Removed HostedBy Patch as described on ticket #7219, Now all the records will have hosted by Unknown Repository
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2021-11-22 16:03:17 +01:00 |
Claudio Atzori
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3a4d925386
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Merge branch 'beta' into hierarchical_orgs_relations
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2021-11-18 18:07:08 +01:00 |
Claudio Atzori
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bafa2990f3
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code formatting
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2021-11-15 17:07:16 +01:00 |
Miriam Baglioni
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4ec88c718c
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merge with beta - resolved conflict in pom
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2021-11-15 10:52:16 +01:00 |
Miriam Baglioni
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6f1a434e90
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[Bypass Action Set] Fixed test to consider the new identifier utils
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2021-11-15 09:59:23 +01:00 |
Miriam Baglioni
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716021546e
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[Bypass Action Set] minor fix
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2021-11-12 10:18:01 +01:00 |