19 Commits

Author	SHA1	Message	Date
Enrico Ottonello	33dcf9964c	fixed alternate identifier	2022-05-18 12:02:27 +02:00
Enrico Ottonello	792e78e848	fixed alternate identifier redundant	2022-05-18 10:44:31 +02:00
Enrico Ottonello	aef88f9e5c	added accessrights and hostedby	2022-05-18 10:07:50 +02:00
Enrico Ottonello	f6c37656c9	instance type set to 0046 - Bioentity	2022-05-18 09:46:43 +02:00
Enrico Ottonello	41de8fb785	added ped test with doi citation; fix pmid pid type	2022-05-13 12:27:40 +02:00
Enrico Ottonello	9a0ca0296a	added mobidb constants configuration and test	2022-04-07 13:17:50 +02:00
Enrico Ottonello	d0df02062c	raised runtimeexception on record without title or url	2022-04-06 13:19:58 +02:00
Enrico Ottonello	7fc5b97871	skipped record without title or url	2022-04-06 13:08:48 +02:00
Enrico Ottonello	a203c33693	added disprot constants configuration	2022-04-06 12:48:24 +02:00
Enrico Ottonello	f11dfc51f7	fix resolved url format, added alternate identifier from original pid	2022-03-22 16:39:21 +01:00
Enrico Ottonello	afe84c4244	added subjects to oaf generation	2022-03-18 18:10:39 +01:00
Enrico Ottonello	e53a606afc	added date of collection, resource type as workflow parameter	2022-03-15 17:36:48 +01:00
Enrico Ottonello	29ee1b9d82	added datasource key to workflow parameter to properly choose collected from and id values	2022-03-03 12:31:29 +01:00
Enrico Ottonello	e57216a1fa	added oozie workflow to generate bioschema dataset on hdfs	2022-03-02 16:58:10 +01:00
Enrico Ottonello	f28d7e3b9d	added spark dataset creation	2022-03-02 12:12:37 +01:00
Enrico Ottonello	7f9636ef00	added alternateIdentifiers to oaf	2022-02-25 14:42:08 +01:00
Enrico Ottonello	2f5caef77b	resolution of generated relations url to uniprot and pubmed datasources	2022-02-24 16:59:50 +01:00
Enrico Ottonello	2bc79c50f8	mapping bioschema to oaf	2022-02-22 11:46:29 +01:00
Enrico Ottonello	446f81ee60	wf to generate oaf from bioschema json datacite	2022-02-22 11:42:57 +01:00