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3036 Commits

Author SHA1 Message Date
Claudio Atzori 863a2f9db3 avoid to filter OAF records defined as invisible = true 2021-12-03 09:08:12 +01:00
Claudio Atzori 9cac283bec implemented Instance serialization features requested in https://support.openaire.eu/issues/7156 2021-12-02 17:20:33 +01:00
Miriam Baglioni d9f80488cc [GRAPH DUMP] Add one more test to check the filtering of the relations 2021-12-02 14:15:19 +01:00
Miriam Baglioni 58bc3f223a [GRAPH DUMP] Add filtering for relation we do not want to dump. It is based on the relclass 2021-12-02 14:09:46 +01:00
Miriam Baglioni 8905a39bf3 mergin with branch beta 2021-12-02 13:17:29 +01:00
Miriam Baglioni 87eedad898 - 2021-12-02 13:17:19 +01:00
Claudio Atzori 3b19821f3c added stats computation on the graph hive DB tables 2021-12-02 10:44:10 +01:00
Claudio Atzori cfa4560769 minor: fixed hive action name 2021-12-02 10:43:36 +01:00
Claudio Atzori d85af6fc25 [cleaning wf] fixed OAF record navigation, a mapping defined on a container object would have prevented the natvigation to continue on its properties 2021-12-01 15:49:15 +01:00
Claudio Atzori 4fe7888817 code formatting 2021-12-01 15:48:15 +01:00
Claudio Atzori 01e5e0142a added test to verify the relation inverse lookup operation 2021-12-01 09:46:26 +01:00
Claudio Atzori 0df9574a6f Merge pull request '[stats wf] Added sprint 3&4 of indicators' (#166) from antonis.lempesis/dnet-hadoop:beta into beta 
Reviewed-on: D-Net/dnet-hadoop#166
 2021-11-29 10:40:26 +01:00
Claudio Atzori 014e872ae1 [resolution wf] added optional parameter to skip the entity resolution 2021-11-26 15:38:56 +01:00
Claudio Atzori 5c6d328537 code formatting 2021-11-26 15:38:16 +01:00
dimitrispie 09fc2afdca Added indi_funder_country_collab 
Kept only indi_pub_has_cc_licence
 2021-11-26 16:13:10 +02:00
Antonis Lempesis 0b4163ee0b added sprint3,4, removed 2, chaos 2021-11-26 15:58:01 +02:00
dimitrispie 29f69f2f89 Sprint 4 2021-11-26 15:22:04 +02:00
Miriam Baglioni ac07ed8251 Merge branch 'beta' of https://code-repo.d4science.org/D-Net/dnet-hadoop into beta 2021-11-25 12:32:58 +01:00
Miriam Baglioni 5fd0e610bf [DOIBOOST Process] fix filtering to filter results with non null id 2021-11-25 12:10:45 +01:00
Sandro La Bruzzo feea154e89 remove working dir after test 2021-11-25 11:02:38 +01:00
Sandro La Bruzzo 028a8acad8 add test resources 2021-11-25 10:54:47 +01:00
Sandro La Bruzzo 2164a2a889 Datacite: Code Refactor generated a general SparkApplication Scala where all the spark scala have to inherit 
Commented a little the Datacite transformation code
 2021-11-25 10:54:13 +01:00
Sandro La Bruzzo a7cf277d98 Datacite: Removed HostedBy Patch as described on ticket #7219, Now all the records will have hosted by Unknown Repository 2021-11-22 16:03:17 +01:00
Sandro La Bruzzo 483d3039d1 entity resolution: added distcpt of missing entities in graph materialization 2021-11-22 15:55:24 +01:00
Sandro La Bruzzo 93fe8ce8b2 entity resolution: fix test 2021-11-22 15:50:43 +01:00
Sandro La Bruzzo 35e20b0647 updated resolution wf: 
- generate a new version of the graph
 - changed merge from union to join
 2021-11-22 11:48:55 +01:00
Miriam Baglioni fdb75b180e [Cleaning] added couple of tests for DOIBOOST publications 2021-11-21 16:35:22 +01:00
Miriam Baglioni 0506fa2654 [Graph Dump] changed to mirror the changes in the model 2021-11-19 15:56:25 +01:00
Sandro La Bruzzo 3426451d3f Merge remote-tracking branch 'origin/beta' into beta 2021-11-19 14:49:04 +01:00
Sandro La Bruzzo 4542a2338b updated site configuration to deploy on website 2021-11-19 13:44:08 +01:00
Claudio Atzori e5a2c596b2 Merge branch 'beta' into preserve_openorg_parent_child_relations 2021-11-19 11:35:46 +01:00
Claudio Atzori f4538f3c4c cleanup 2021-11-19 11:33:10 +01:00
Claudio Atzori 2b46b87f56 fixed filtering criteria applied in SparkCopyRelationsNoOpenorgs to keep the parent/child relations from OpenOrgs 2021-11-19 11:30:29 +01:00
Miriam Baglioni 9fae872181 [Graph Dump] changed to mirror the changes in the model 2021-11-19 11:25:50 +01:00
Sandro La Bruzzo fc03c99805 fixed javadocs url after deploying site 2021-11-19 10:46:33 +01:00
Sandro La Bruzzo 0c0d561bc4 added public class into tests to create correct javadoc 2021-11-19 09:54:22 +01:00
Claudio Atzori 62fa61f3cf merge from beta 2021-11-19 09:23:42 +01:00
Claudio Atzori bd9a43cefd Revert to 4094f2bb9a 2021-11-19 09:20:43 +01:00
Claudio Atzori 3974fa7dc1 Merge branch 'beta' into affiliationPropagation 2021-11-18 18:06:26 +01:00
Claudio Atzori a24b9f8268 [dedup] trivial refactoring 2021-11-18 17:12:02 +01:00
Claudio Atzori c0750fb17c avoid non necessary count operations over large spark datasets 2021-11-18 17:11:31 +01:00
Claudio Atzori bb5dca7979 cleanup 2021-11-18 17:10:46 +01:00
Miriam Baglioni 793b5a8e5f Aggiornare 'dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/oa/graph/dump/ResultMapper.java' 
Removing the dump of Measure at the level of the result. We decided not to map it
 2021-11-18 14:49:38 +01:00
Miriam Baglioni 5dc5792722 [Graph Dump] Change test resource to mirror the movement of the measure element 2021-11-18 14:39:12 +01:00
Miriam Baglioni 0136a8c266 [Graph Dump] Change test to mirror that measure is at the level of the isntance 2021-11-18 14:38:33 +01:00
Miriam Baglioni 1b79c0ee79 mergin with branch beta 2021-11-18 11:01:00 +01:00
Antonis Lempesis cb3adb90f4 Merge branch 'beta' into beta 2021-11-17 14:33:45 +01:00
Antonis Lempesis c283406829 added Universidad Polytecnica de Madrid 2021-11-17 15:33:00 +02:00
Claudio Atzori e0395719d7 Merge branch 'beta' of https://code-repo.d4science.org/D-Net/dnet-hadoop into beta 2021-11-17 14:17:27 +01:00
Claudio Atzori 82a4e4efae [cleaning wf] fixed methodology to rule out invalid result titles, based on https://support.openaire.eu/issues/7206 2021-11-17 14:17:22 +01:00
Miriam Baglioni 6d4a1c57ee [Resolve Entities] Change test dataset to mirror the modification in the creation of the map between the pids and the unresolved 2021-11-17 12:41:52 +01:00
Sandro La Bruzzo 9c82d670b8 make class public in order to create javadoc 2021-11-17 12:31:02 +01:00
Sandro La Bruzzo 1f5ee116ed code refactor, created and moved scala code on the correct maven folder under src/main/scala and src/test/scala 
fixed test
 2021-11-17 12:23:52 +01:00
Sandro La Bruzzo 2fd9ceac13 code refactor, created and moved scala code on the correct maven folder under src/main/scala and src/test/scala 2021-11-17 11:35:22 +01:00
Sandro La Bruzzo 2506d7a679 Merge branch 'mvn_site_documentation' of code-repo.d4science.org:D-Net/dnet-hadoop into mvn_site_documentation 2021-11-17 11:07:24 +01:00
Sandro La Bruzzo cded363b55 code refactor, created and moved scala code on the correct maven folder under src/main/scala and src/test/scala 2021-11-17 11:06:35 +01:00
Miriam Baglioni 4094f2bb9a added integration md file 2021-11-17 10:04:52 +01:00
Miriam Baglioni ec8b0219ff [Documentation] Added first page for Integration via unresolved entities generation 2021-11-16 17:41:34 +01:00
Miriam Baglioni 2bbece2ca5 mergin with branch beta 2021-11-16 16:35:40 +01:00
Sandro La Bruzzo 2d67020c59 added dhp-enrichment maven site template 2021-11-16 16:01:08 +01:00
Miriam Baglioni 28ea532ece [Affilaition Propagation] moved the selection of graph relation as a preparation step 2021-11-16 15:24:19 +01:00
Sandro La Bruzzo 18c1d70ef4 Merge branch 'beta' of code-repo.d4science.org:D-Net/dnet-hadoop into mvn_site_documentation 2021-11-16 15:16:49 +01:00
Sandro La Bruzzo a1cafaf2e3 added mvn site for dnet-hadoop project 2021-11-16 15:16:28 +01:00
Miriam Baglioni 7c96e3fd46 removed not useful dir 2021-11-16 13:57:26 +01:00
Miriam Baglioni c7c0c3187b [AFFILIATION PROPAGATION] Applied some SonarLint suggestions 2021-11-16 13:56:32 +01:00
Miriam Baglioni c6a9f0a1a8 mergin with branch beta 2021-11-16 12:04:40 +01:00
Miriam Baglioni 99d86134f5 [Graph Dump] changed the dump since the measures have been moded at the level of the instance 2021-11-16 12:04:21 +01:00
Claudio Atzori 0a727d325d [dedup] increased number of partitions in the consistency phase 2021-11-16 08:43:41 +01:00
Claudio Atzori bafa2990f3 code formatting 2021-11-15 17:07:16 +01:00
Claudio Atzori 668ac25224 [graph resolution] using existing argument parser file name 2021-11-15 17:02:45 +01:00
Claudio Atzori 7d0a03f607 [graph resolution] minor 2021-11-15 14:45:54 +01:00
Claudio Atzori 941a50a2fc Merge branch 'beta' of https://code-repo.d4science.org/D-Net/dnet-hadoop into beta 2021-11-15 14:42:49 +01:00
Claudio Atzori 7c804acda8 [graph resolution] minor 2021-11-15 14:42:43 +01:00
Sandro La Bruzzo efa09057db Merge branch 'beta' of code-repo.d4science.org:D-Net/dnet-hadoop into beta 2021-11-15 14:32:09 +01:00
Sandro La Bruzzo 48923e46a1 added documentation to Pubmed Class and also added mvn site for dhp-aggregations 2021-11-15 14:32:01 +01:00
Claudio Atzori d2c787d416 [graph resolution] fixed sequence of the workflow steps 2021-11-15 14:31:15 +01:00
Claudio Atzori 975b10b711 [actionmanager] increased spark.sql.shuffle.partitions to 5000 2021-11-15 12:31:45 +01:00
Miriam Baglioni 4ec88c718c merge with beta - resolved conflict in pom 2021-11-15 10:52:16 +01:00
Miriam Baglioni 6f1a434e90 [Bypass Action Set] Fixed test to consider the new identifier utils 2021-11-15 09:59:23 +01:00
Miriam Baglioni 157d33ebf9 [Bypass Action Set] Refactoring 2021-11-15 09:58:48 +01:00
Miriam Baglioni 6595135a1a [Dump Schemas] changed the schema of the dumped result according to the modifications in the bestAccessRight type 2021-11-12 11:45:38 +01:00
Miriam Baglioni 43cae4ad88 Merge branch 'dump' of https://code-repo.d4science.org/D-Net/dnet-hadoop into dump 2021-11-12 11:36:54 +01:00
Miriam Baglioni b3f9370125 merge with beta - resolved conflict in pom 2021-11-12 11:25:26 +01:00
Miriam Baglioni 92d0e18b55 [Bypass Action Set] used constant DOI instead of "doi" 2021-11-12 10:56:58 +01:00
Miriam Baglioni 881113743f [Bypass Action Set] refactoring 2021-11-12 10:55:50 +01:00
Miriam Baglioni 47ccb53c4f [Bypass Action Set] modification for comment D-Net/dnet-hadoop#157 (comment) 2021-11-12 10:54:09 +01:00
Miriam Baglioni ffb0ce1d59 merge with beta - resolved conflict in pom 2021-11-12 10:19:59 +01:00
Miriam Baglioni 716021546e [Bypass Action Set] minor fix 2021-11-12 10:18:01 +01:00
Sandro La Bruzzo 3469cc2b1d Merge branch 'beta' of code-repo.d4science.org:D-Net/dnet-hadoop into beta 2021-11-12 09:56:52 +01:00
Sandro La Bruzzo a7763d2492 removed alternate identifier in resolutionMap 2021-11-12 09:56:45 +01:00
Miriam Baglioni b8bdabfae9 [Graph DUmp] removed OpenAccessRoute from test in best access right 2021-11-11 16:16:48 +01:00
Miriam Baglioni e5498052e8 [Graph DUmp] removed OpenAccessRoute from test in best access right 2021-11-11 16:14:10 +01:00
Miriam Baglioni 935062edec [Bypass Action Set] creation of unresolved entities 2021-11-11 16:11:25 +01:00
Antonis Lempesis 26f086dd64 removed the too restrctive clause. will discuss again 2021-11-11 12:57:19 +02:00
Claudio Atzori 148289150f Merge branch 'beta' into doiboost_url 2021-11-11 10:40:19 +01:00
Sandro La Bruzzo 2ca0a436ad added SparkResolveEntities node to the oozie wf 2021-11-11 10:25:42 +01:00
Sandro La Bruzzo 9cb195314f implemented and tested resolution of entities 2021-11-11 10:17:40 +01:00
Miriam Baglioni 6d3c4c4abe mergin with branch beta 2021-11-11 08:59:53 +01:00
Miriam Baglioni 8cc50ecee0 [Graph Dump] changed AccessRight with BestAccessRight in the dump and modified the dependency to the schema to the SNAPSHOT 2021-11-11 08:59:20 +01:00
Miriam Baglioni 88b73f4f49 mergin with branch beta 2021-11-10 17:00:52 +01:00