dimitris.pierrakos
/
dnet-hadoop
forked from D-Net/dnet-hadoop
1
0
Fork 0
Code Pull Requests Activity
4,813 Commits 67 Branches 18 Tags 644 MiB
Commit Graph

4010 Commits

Author SHA1 Message Date
Miriam Baglioni 5c5a195e97 refactoring and fixing issue on property name 2023-10-23 11:26:17 +02:00
Miriam Baglioni 70b78a40c7 removed file from different propagation 2023-10-20 15:50:49 +02:00
Miriam Baglioni f206ff42d6 modified code to use the the API. Removing not needed parameters. Rewritten the code to exploit the parallel stream on the entity types 2023-10-20 15:49:41 +02:00
Miriam Baglioni 34358afe75 modified resource file, workflow anf default-config. Add 3g of memory Overhead and specified the shuffle partition in the wf confiduration. Removed the multiple instantiation in the wf because of different implementation of the spark job 2023-10-20 15:48:27 +02:00
Miriam Baglioni 18bfff8af3 adding test classes and modifying test for bulktag 2023-10-20 15:47:03 +02:00
Miriam Baglioni 69dac91659 adding the new code to use the API instead of the Information Service 2023-10-20 15:45:52 +02:00
Claudio Atzori 242d647146 cleanup & docs 2023-10-12 12:23:44 +02:00
Claudio Atzori af3ffad6c4 [AMF] docs 2023-10-12 10:07:52 +02:00
Claudio Atzori d13bb534f0 Merge branch 'master' into fix_8997 2023-10-02 11:03:18 +02:00
Sandro La Bruzzo 9c3ab11d5b Merge branch 'master' of code-repo.d4science.org:D-Net/dnet-hadoop 2023-09-25 15:29:19 +02:00
Sandro La Bruzzo 423ef30676 minor fix on the aggregation of uniprot and pdb 2023-09-25 15:28:58 +02:00
Claudio Atzori 4853c19b5e code formatting 2023-09-20 15:53:21 +02:00
Giambattista Bloisi 1f226d1dce Fix defect #8997: GenerateEventsJob is generating huge amounts of logs because broker entity similarity calculation consistently failed 2023-09-20 15:42:00 +02:00
Alessia Bardi 6186cdc2cc Use v5 of the UNIBI Gold ISSN list in test 2023-09-19 14:47:01 +02:00
Alessia Bardi d94b9bebf7 Merge branch 'master' of https://code-repo.d4science.org/D-Net/dnet-hadoop 2023-09-19 13:38:45 +02:00
Alessia Bardi 19abba8fa7 tests for d4science catalog 2023-09-19 13:38:25 +02:00
Serafeim Chatzopoulos 2aed5a74be Run CC and RAM sequentieally in dhp-impact-indicators WF 2023-09-12 22:31:50 +03:00
Alessia Bardi 77a2199837 updated test for EOSC comunity 2023-09-08 11:05:49 +02:00
Claudio Atzori 265180bfd2 added Archive ouverte UNIGE (ETHZ.UNIGENF, opendoar____::1400) to the Datacite hostedBy_map 2023-09-07 11:20:35 +02:00
Claudio Atzori da0e9828f7 resolved conflicts for PR#337 2023-09-06 11:28:46 +02:00
Claudio Atzori adec6692ca Merge branch 'beta' into invisible_relations 2023-09-04 16:13:06 +02:00
Claudio Atzori 15666e86a8 added collectedfrom to the affiliation relations imported from Crossref 2023-09-04 15:56:06 +02:00
Claudio Atzori 5b06c9d06f [graph raw] datainfo.invisible set as true only for entities 2023-09-04 15:15:24 +02:00
Serafeim Chatzopoulos 7de0164c26 Fix import of affiliations relations from Crossref 2023-09-04 16:04:41 +03:00
Giambattista Bloisi 6b1c05d118 Add sparkExecutorMemoryOverhead workflow config to set off-heap memory for Spark actions. If not explicitly set it is defaulted to 1Gb 2023-08-29 16:04:19 +02:00
Claudio Atzori bf35280ea6 code formatting 2023-08-29 11:11:00 +02:00
Claudio Atzori 58665a246c Merge branch 'beta' into propagate_relation_rewrite 2023-08-29 10:47:02 +02:00
Claudio Atzori f437be80ad [impact indicators] adjusted paths in the bip ranker wf parameters 2023-08-29 09:03:03 +02:00
Giambattista Bloisi d012aec0b3 Revert PropagateRelation's argument name from outputPath to graphOutputPath in consistency workflow (#8964) 2023-08-28 22:44:54 +02:00
Giambattista Bloisi a860e19423 Fix ensure all relations are written out, not only those managed by dedup 2023-08-28 15:36:02 +02:00
Giambattista Bloisi 0d7b2bf83d Rewrite SparkPropagateRelation exploiting Dataframe API 2023-08-28 10:34:54 +02:00
Miriam Baglioni 9c8b41475a Merge pull request '8172_impact_indicators_workflow' (#284) from 8172_impact_indicators_workflow into beta 
Reviewed-on: D-Net/dnet-hadoop#284
 2023-08-14 15:50:48 +02:00
Serafeim Chatzopoulos 97c1ba8918 Merge actionsets of results and projects 2023-08-11 15:56:53 +03:00
Giambattista Bloisi 95cd2b9b1e Make filterInvisible a mandatory parameter of DispathEntitiesSparkJob 
Make filterInvisible a mandatory parameter of both dedup/consistency and graph/group oozie workflows
 2023-08-10 11:53:48 +02:00
Giambattista Bloisi fab9920271 DispatchEntitiesSparkJob: manage all entity types together, support filtering by dataInfo.invisible flag 2023-08-09 15:41:43 +02:00
Miriam Baglioni c25ac21e5e Merge pull request 'graph cleaning, suggestions from ticket 8898' (#325) from cleaning_8898 into beta 
Reviewed-on: D-Net/dnet-hadoop#325
 2023-08-08 11:14:19 +02:00
Miriam Baglioni c334fe2438 Merge pull request 'Add a "CleanRelation" action after the PropagateRelation to filter out all relations that have been deleted by inference or that are pointing to dangling entities' (#328) from cleanup_relations_after_dedup into beta 
Reviewed-on: D-Net/dnet-hadoop#328
 2023-08-08 09:49:12 +02:00
Miriam Baglioni 0e2f855807 Merge pull request 'Updates Promotion DBs' (#321) from antonis.lempesis/dnet-hadoop:beta into beta 
Reviewed-on: D-Net/dnet-hadoop#321
 2023-08-07 12:09:16 +02:00
Miriam Baglioni 18fbe52b20 Merge pull request 'Import affiliation relations from Crossref' (#320) from 8876 into beta 
Reviewed-on: D-Net/dnet-hadoop#320
 2023-08-07 10:45:30 +02:00
Giambattista Bloisi 97b6d1dc45 Filter ids by dataInfo.deletedbyinference and DataInfo.invisible flags 
Filter relations also by dataInfo.invisible flag
 2023-08-07 10:24:11 +02:00
Giambattista Bloisi af49424b59 Add a "CleanRelation" action after the PropagateRelation to filter out all relations that have been deleyted by inference or that are pointing to dangling entities 2023-08-04 14:27:39 +02:00
Claudio Atzori 0bc74e2000 code formatting 2023-08-02 11:52:10 +02:00
Claudio Atzori 11ffb9bd68 rule out records with NULL dataInfo 2023-07-31 12:35:33 +02:00
Claudio Atzori ccac6a7f75 rule out records with NULL dataInfo 2023-07-31 12:35:05 +02:00
Serafeim Chatzopoulos 7cefe2665b Remove unnecessary classes 2023-07-28 19:14:39 +03:00
Serafeim Chatzopoulos 26a92ce762 Merge branch '8876' of https://code-repo.d4science.org/D-Net/dnet-hadoop into 8876 2023-07-28 19:03:57 +03:00
Serafeim Chatzopoulos ebfba38ab6 Add changes from code review 2023-07-28 19:03:47 +03:00
Serafeim Chatzopoulos eb8684a8cf Merge branch 'beta' into 8876 2023-07-28 13:39:33 +02:00
Claudio Atzori a72b9e96ac expand the instance level fulltext in the XML records 2023-07-27 14:57:38 +02:00
Claudio Atzori 59764145bb cherry picked & fixed commit 270df939c4 2023-07-25 17:39:00 +02:00