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1616 Commits

Author SHA1 Message Date
Thomas Georgios Giannos a5f46e9328 Adding description templates on dmp persist 2023-11-06 17:42:12 +02:00
George Kalampokis 49e34f9abc Merge remote-tracking branch 'origin/dmp-refactoring' into dmp-refactoring 2023-11-06 17:25:00 +02:00
George Kalampokis 5ceed08b9c Add missing apply filter 2023-11-06 17:22:36 +02:00
Efstratios Giannopoulos 20873ca13e Merge branch 'dmp-refactoring' of code-repo.d4science.org:MaDgiK-CITE/argos into dmp-refactoring 
# Conflicts:
#	dmp-backend/web/src/main/java/eu/eudat/controllers/Admin.java
 2023-11-06 17:17:34 +02:00
Efstratios Giannopoulos 87e22040c5 description template migration 2023-11-06 17:16:55 +02:00
George Kalampokis e42bdcfc0a Code cleanup 2023-11-06 16:58:01 +02:00
George Kalampokis c6cdcc4b15 Apply requested changes to RepositoryDepositService 2023-11-06 16:56:59 +02:00
Efstratios Giannopoulos d8b1211a12 Merge branch 'dmp-refactoring' of code-repo.d4science.org:MaDgiK-CITE/argos into dmp-refactoring 
# Conflicts:
#	dmp-backend/web/src/main/java/eu/eudat/controllers/FileController.java
#	dmp-backend/web/src/main/java/eu/eudat/models/data/listingmodels/DataManagementPlanOverviewModel.java
 2023-11-06 16:19:06 +02:00
Efstratios Giannopoulos 81528dfe55 description refactor 2023-11-06 16:17:57 +02:00
amentis 11bb1a3c8c create Supportive Material query public 2023-11-06 15:25:04 +02:00
Thomas Georgios Giannos 9b9cf0de4d Adding dmp-description-template stack 2023-11-06 13:31:01 +02:00
amentis fda8fcef2c create Supportive Material Entity, (persist in progress) 2023-11-03 18:09:19 +02:00
George Kalampokis c636b3e6b4 Minor query optimization 2023-11-03 18:00:06 +02:00
George Kalampokis 7bb8e850e8 Add first implementation of the new Repository Deposit Service 2023-11-03 17:54:26 +02:00
Thomas Georgios Giannos b389ebf160 Fix on dmp references persisting flow 2023-11-03 16:47:54 +02:00
Thomas Georgios Giannos 2f20675348 Adding reference persisting on dmp persist (work in progress), adding separate persist models for dmp properties 2023-11-03 16:02:47 +02:00
Efstratios Giannopoulos 9cf91aab50 DescriptionTemplate refactor 2023-11-03 15:53:18 +02:00
Efstratios Giannopoulos 08caf64d02 DescriptionTemplate refactor 2023-11-03 14:53:10 +02:00
amentis c37530c022 add supportive material editor to UI 2023-11-03 13:30:11 +02:00
Efstratios Giannopoulos b6278ab1ef DescriptionTemplate refactor 2023-11-03 11:55:26 +02:00
Efstratios Giannopoulos d38f22ccbf DescriptionTemplate refactor 2023-11-02 18:37:12 +02:00
Thomas Georgios Giannos e02237e599 Adding new version service method for Dmps 2023-11-02 18:12:36 +02:00
Thomas Georgios Giannos 752935f6e5 Updating Dmp properties persist 2023-11-02 15:55:17 +02:00
Efstratios Giannopoulos 732dfd9bfb DmpBlueprint feractor 2023-11-02 14:13:13 +02:00
Thomas Georgios Giannos c3808b5548 Updating Dmp Entity fields to reflect the database changes (migration script not yet updated) 2023-11-02 13:45:32 +02:00
Efstratios Giannopoulos ac15e33a87 DescriptionTemplate refactor 2023-11-01 18:12:59 +02:00
George Kalampokis 3c799063cc Fix Deposit Configuration's Authentication system 2023-11-01 14:10:35 +02:00
Efstratios Giannopoulos 4e08d9f073 DescriptionTemplate refactor 2023-11-01 12:03:23 +02:00
amentis be9761b103 add more fields to reference-type.yml 2023-10-31 17:57:41 +02:00
Efstratios Giannopoulos 7e391582b5 User DescriptionTemplate refactor 2023-10-31 17:24:03 +02:00
Diamantis Tziotzios c08f05bc04 no message 2023-10-31 11:19:52 +02:00
Efstratios Giannopoulos 2b074f268d DescriptionTemplate refactor 2023-10-30 18:02:20 +02:00
amentis 477e4e498e add frontend reference search lookup 2023-10-30 17:53:30 +02:00
amentis f744573f02 add reference search builders, lookup 2023-10-30 17:15:40 +02:00
Diamantis Tziotzios 557c444bc1 frontend description template listing component 2023-10-30 15:30:46 +02:00
Efstratios Giannopoulos c06253bb20 DescriptionTemplate refactor 2023-10-30 15:07:59 +02:00
amentis 49d400662b add reference definition censor 2023-10-30 10:57:24 +02:00
amentis a0ac8df5ba rename sourceType 2023-10-30 10:43:50 +02:00
Diamantis Tziotzios 9201f265d2 Merge branch 'dmp-refactoring' of https://code-repo.d4science.org/MaDgiK-CITE/argos into dmp-refactoring 
# Conflicts:
#	dmp-frontend/src/app/core/model/reference/reference.ts
 2023-10-27 18:59:51 +03:00
Diamantis Tziotzios 7214745162 frontend dmp changes 2023-10-27 18:56:19 +03:00
Efstratios Giannopoulos bdcaee004d Merge branch 'dmp-refactoring' of code-repo.d4science.org:MaDgiK-CITE/argos into dmp-refactoring 
# Conflicts:
#	dmp-backend/core/src/main/java/eu/eudat/audit/AuditableAction.java
#	dmp-backend/web/src/main/resources/config/permissions.yml
 2023-10-27 18:52:34 +03:00
Efstratios Giannopoulos 57facf98e5 DescriptionTemplate refactor 2023-10-27 18:46:34 +03:00
amentis 9d3cc9e3d2 rename sourceType to referenceSourceType 2023-10-27 18:29:06 +03:00
amentis 92c165e904 add references definition xml,builder, persist 2023-10-27 17:35:35 +03:00
Thomas Georgios Giannos 65e8635c2f Removing unused dataset entity classes 2023-10-27 17:32:07 +03:00
Thomas Georgios Giannos e31970c7ea Adding migration scripts for Dmp, DmpReference, Description and DescriptionReference entities, other fixes / clear up dmp entity 2023-10-27 17:05:48 +03:00
Thomas Georgios Giannos 8d1c988135 Adding DescriptionReference lookup and linking on description entity builder 2023-10-27 13:48:17 +03:00
Thomas Georgios Giannos 60ca51fe00 Adding DescriptionReference entity stack (former Dataset*** entities) 2023-10-27 11:59:37 +03:00
amentis 7508cf8698 add created, updated in DmpReference 2023-10-27 11:41:44 +03:00
Diamantis Tziotzios e4203a3bb4 backend fixes 2023-10-27 09:54:49 +03:00
George Kalampokis d983e1e38e Add Deposit Security 2023-10-26 18:04:55 +03:00
amentis aecac1995d rename External Reference to Reference 2023-10-26 14:38:18 +03:00
amentis f006587f4a Merge remote-tracking branch 'origin/dmp-refactoring' into dmp-refactoring 2023-10-26 12:09:36 +03:00
amentis bbb21fadba rename External Reference to Reference 2023-10-26 12:07:04 +03:00
Diamantis Tziotzios 4eca9b32c9 various backend fixes 2023-10-26 11:21:33 +03:00
Diamantis Tziotzios 129dbd163a minor fixes dmp blueprints and Dmps. 2023-10-25 20:53:47 +03:00
amentis 45f8f51288 Merge branch 'dmp-refactoring' of https://code-repo.d4science.org/MaDgiK-CITE/argos into dmp-refactoring 2023-10-25 17:38:21 +03:00
amentis 032b30ed04 add DmpExternalReference to DmpBlueprint 2023-10-25 17:37:37 +03:00
Thomas Georgios Giannos 9a78d98751 Updating permissions.yml for dmps, entity_dois and descriptions 2023-10-25 16:55:10 +03:00
Thomas Georgios Giannos c169a103b7 Updating censors for dmp and description entities 2023-10-25 14:49:37 +03:00
amentis 7df098a010 add more to external reference controller, service 2023-10-25 12:42:34 +03:00
Thomas Georgios Giannos 079382556f Added controller for description entity (former dataset) 2023-10-25 11:48:19 +03:00
Thomas Georgios Giannos 7ab1313b83 Updated the dmp builder to be able to populate the associated descriptions on the dmps 2023-10-25 11:17:56 +03:00
amentis bf8edfad92 add ExternalReference, DmpExternalReference entities 2023-10-24 18:47:13 +03:00
Efstratios Giannopoulos a68ddd42ce Merge branch 'dmp-refactoring' of code-repo.d4science.org:MaDgiK-CITE/argos into dmp-refactoring 
# Conflicts:
#	dmp-backend/core/src/main/java/eu/eudat/authorization/Permission.java
 2023-10-24 18:01:38 +03:00
Efstratios Giannopoulos de566729f1 DmpBlueprint refactor 2023-10-24 18:00:11 +03:00
Thomas Georgios Giannos e149b61b58 Adding 'dmp' query option on 'description' query 2023-10-24 17:24:51 +03:00
Thomas Georgios Giannos 1e733cf704 Connecting 'dmp' entity with 'description' entity (description builder populating dmp data) 2023-10-24 17:07:28 +03:00
Thomas Georgios Giannos 3e7b9ca90b Optimize imports 2023-10-24 15:39:11 +03:00
Thomas Georgios Giannos e27468b596 Adding basic service for 'description' entity 2023-10-24 15:38:15 +03:00
Thomas Georgios Giannos 485f7311cd Adding builder and query for 'description' entity 2023-10-24 13:50:53 +03:00
Thomas Georgios Giannos e3536285aa Adding 'description' entity (former 'dataset' entity) 2023-10-24 12:47:48 +03:00
Efstratios Giannopoulos a68668f07e DmpBlueprint refactor 2023-10-24 12:13:05 +03:00
Thomas Georgios Giannos dc380cdc01 Small fix on dmp entity id definition 2023-10-24 11:35:19 +03:00
Efstratios Giannopoulos 167d3d4a4b DmpBlueprint refactor 2023-10-23 18:13:34 +03:00
amentis 10615c6fa9 fix front enums 2023-10-23 17:58:56 +03:00
Efstratios Giannopoulos 3b9b348d4d update External Refence 2023-10-23 16:53:32 +03:00
Efstratios Giannopoulos fe7d6f59b1 DmpBlueprint refacto 2023-10-23 15:58:33 +03:00
Thomas Georgios Giannos f4d84aa807 Implemented controller for dmp entity, dmp lookup update 2023-10-23 14:45:05 +03:00
Thomas Georgios Giannos 074ca35970 Implemented service for dmp entity 2023-10-23 12:51:11 +03:00
Thomas Georgios Giannos eeaa35fab5 Added censor, deleter and lookup for Dmp entity 2023-10-23 12:23:51 +03:00
Diamantis Tziotzios 172caabcd2 Merge branch 'dmp-refactoring' of https://code-repo.d4science.org/MaDgiK-CITE/argos into dmp-refactoring 2023-10-23 11:58:32 +03:00
Diamantis Tziotzios 6a8cb2c853 more frontend dmp blueprint listing changes 2023-10-23 11:58:15 +03:00
Thomas Georgios Giannos 61f2810fcc Renamed DMP -> Dmp to be consistent with the other entities 2023-10-23 11:31:07 +03:00
Diamantis Tziotzios 6d6a4e0341 Merge branch 'dmp-refactoring' of https://code-repo.d4science.org/MaDgiK-CITE/argos into dmp-refactoring 2023-10-23 11:27:27 +03:00
Diamantis Tziotzios 0c1509a1a1 Merge branch 'dmp-refactoring' of https://code-repo.d4science.org/MaDgiK-CITE/argos into dmp-refactoring 
# Conflicts:
#	dmp-backend/core/src/main/java/eu/eudat/audit/AuditableAction.java
 2023-10-23 11:27:03 +03:00
Thomas Georgios Giannos 10df3db7aa Merge branch 'dmp-refactoring' of https://code-repo.d4science.org/MaDgiK-CITE/argos into dmp-refactoring 2023-10-23 11:17:23 +03:00
Thomas Georgios Giannos c338a93d71 Implemented builder and query for DMP entity, refactored services package 2023-10-23 11:16:58 +03:00
Efstratios Giannopoulos 6cde8ae2a9 add cross origin config 2023-10-23 11:15:08 +03:00
Efstratios Giannopoulos 3ad7441bb5 DmpBlueprint refactor 2023-10-23 10:21:25 +03:00
Diamantis Tziotzios 3422b147c8 Merge branch 'dmp-refactoring' of https://code-repo.d4science.org/MaDgiK-CITE/argos into dmp-refactoring 2023-10-22 13:34:12 +03:00
Efstratios Giannopoulos 30bff76163 Merge branch 'dmp-refactoring' of code-repo.d4science.org:MaDgiK-CITE/argos into dmp-refactoring 
# Conflicts:
#	dmp-backend/core/src/main/java/eu/eudat/commons/enums/ExternalReferencesType.java
 2023-10-20 19:17:14 +03:00
Efstratios Giannopoulos 88088d64fd DmpBlueprint refactor 2023-10-20 19:13:57 +03:00
Diamantis Tziotzios 9ed94450bd Merge branch 'dmp-refactoring' of https://code-repo.d4science.org/MaDgiK-CITE/argos into dmp-refactoring 2023-10-20 18:01:15 +03:00
Diamantis Tziotzios 4d3098860d description template type and dmp blueprint frontend changes 2023-10-20 18:01:09 +03:00
amentis 0bd3ff6898 fix external references enums 2023-10-20 17:44:41 +03:00
Thomas Georgios Giannos a94cce47e8 Added DMP Entity (not integrated) 2023-10-20 16:48:55 +03:00
George Kalampokis 7d4b4c171b Apply some minor fixes 2023-10-20 11:57:25 +03:00
Efstratios Giannopoulos 0b3178177a changes for remote fetcher 2023-10-19 17:56:53 +03:00
Thomas Georgios Giannos 2a4e61f08f Added controller for EntityDoi entity 2023-10-19 17:48:41 +03:00
Thomas Georgios Giannos 727702023f Reverting changes on join DMP <-> EntityDoiEntity for now in order for the app to be able to run 2023-10-19 16:52:41 +03:00
Efstratios Giannopoulos 16604a8a50 bug fixes 2023-10-19 13:01:29 +03:00
Thomas Georgios Giannos 07ff58fbd9 Removing joins from DMP <-> EntityDoiEntity 2023-10-19 12:41:47 +03:00
Efstratios Giannopoulos a235eb98f4 task #9088 Authorization model should be changed to be Permission based 2023-10-19 10:44:20 +03:00
Efstratios Giannopoulos ce8ff28955 Merge branch 'dmp-refactoring' of code-repo.d4science.org:MaDgiK-CITE/argos into dmp-refactoring 
# Conflicts:
#	dmp-backend/data/src/main/java/eu/eudat/data/dao/entities/EntityDoiDao.java
#	dmp-backend/data/src/main/java/eu/eudat/data/dao/entities/EntityDoiDaoImpl.java
#	dmp-backend/web/src/main/java/eu/eudat/logic/managers/DataManagementPlanManager.java
#	dmp-backend/web/src/main/java/eu/eudat/logic/managers/DepositManager.java
 2023-10-18 19:03:35 +03:00
Efstratios Giannopoulos 52e59ac11c task #9088 Authorization model should be changed to be Permission based 2023-10-18 18:52:03 +03:00
George Kalampokis dc752f73ca Partially fix Deposit Logic and add support for upcomming micro-services 2023-10-18 18:15:52 +03:00
amentis 7cba7b2346 add external references service 2023-10-18 18:05:39 +03:00
Thomas Georgios Giannos a38342e534 Removed EntityDao logic, added template stack, controller not yet implemented, db script not yet run 2023-10-18 17:58:36 +03:00
Efstratios Giannopoulos 941f2d69cc Merge branch 'dmp-refactoring' of code-repo.d4science.org:MaDgiK-CITE/argos into dmp-refactoring 2023-10-18 13:54:47 +03:00
Efstratios Giannopoulos 5c17027df2 fix delete user info additional data 2023-10-18 13:54:02 +03:00
amentis 5203ec4b72 fix remote fetcher 2023-10-18 13:53:52 +03:00
amentis b2119abc08 fix issue 2023-10-18 13:48:20 +03:00
Thomas Georgios Giannos b7d22b5b07 Moving existing entities from Data module to Core module 2023-10-18 13:04:53 +03:00
amentis 1cda821d9c fix issue 2023-10-18 13:00:17 +03:00
amentis ad91234fd9 Merge remote-tracking branch 'origin/dmp-refactoring' into dmp-refactoring 2023-10-18 12:28:13 +03:00
amentis 17bb6bd4b0 add Supportive Material 2023-10-18 12:26:57 +03:00
Efstratios Giannopoulos 27bcc31e54 task #9088 Authorization model should be changed to be Permission based 2023-10-18 12:10:24 +03:00
amentis 3dee4857f8 Merge branch 'dmp-refactoring' of https://code-repo.d4science.org/MaDgiK-CITE/argos into dmp-refactoring 
 Conflicts:
	dmp-frontend/src/assets/config/config.json
 2023-10-18 10:33:59 +03:00
amentis f67ada842e commit 2023-10-18 10:31:57 +03:00
amentis b8affa3033 change pom 2023-10-18 09:58:05 +03:00
Efstratios Giannopoulos 43f77a4497 add status and inactive 2023-10-17 17:48:02 +03:00
Efstratios Giannopoulos b3a73a50aa task #9088 Authorization model should be changed to be Permission based 2023-10-17 17:13:34 +03:00
Diamantis Tziotzios 9fd30b1198 Merge branch 'dmp-refactoring' of https://code-repo.d4science.org/MaDgiK-CITE/argos into dmp-refactoring 
# Conflicts:
#	dmp-backend/core/pom.xml
 2023-10-17 15:56:28 +03:00
Diamantis Tziotzios 3eaf326c50 Description Template Types backend refactored to new format. 2023-10-17 15:55:00 +03:00
Efstratios Giannopoulos 7ed111e936 task #9088 Authorization model should be changed to be Permission based 2023-10-17 15:22:05 +03:00
Efstratios Giannopoulos 419c4d64f8 database enum handle implementation 2023-10-17 13:45:59 +03:00
Efstratios Giannopoulos bd2807fbdf remove zenodo from user info 2023-10-17 12:40:47 +03:00
Efstratios Giannopoulos 925f195f5a database enum handle implementation 2023-10-17 12:39:29 +03:00
Efstratios Giannopoulos 6443654343 Merge branch 'dmp-refactoring' of code-repo.d4science.org:MaDgiK-CITE/argos into dmp-refactoring 2023-10-16 17:39:19 +03:00
Efstratios Giannopoulos 191f887530 database enum handle implementation 2023-10-16 17:38:12 +03:00
Thomas Georgios Giannos b537810406 Removed redundant code that calculated count on queries, already implemented on the data tools package 2023-10-16 12:22:41 +03:00
Thomas Georgios Giannos 234aa359c0 Removed redundant code that calculated count on queries, already implemented on the data tools package 2023-10-16 12:21:58 +03:00
Efstratios Giannopoulos d5c62539c5 task #9086 public urls support 2023-10-13 18:11:46 +03:00
George Kalampokis 5976084473 Fix security on LanguageController 2023-10-13 16:46:38 +03:00
George Kalampokis a9a3273f62 Fix compilation errors and fix swagger ui description formatting 2023-10-13 09:50:22 +03:00
Efstratios Giannopoulos 5009d658ed task #9045 Refactor authentication mechanism to support using Keycloak 2023-10-12 16:16:19 +03:00
Efstratios Giannopoulos 055d29b95f Merge branch 'dmp-refactoring' of code-repo.d4science.org:MaDgiK-CITE/argos into dmp-refactoring 
# Conflicts:
#	dmp-backend/web/pom.xml
#	dmp-backend/web/src/main/resources/config/application.yml
 2023-10-12 12:04:26 +03:00
Diamantis Tziotzios 958fc468fa Merge branch 'dmp-refactoring' of https://code-repo.d4science.org/MaDgiK-CITE/argos into dmp-refactoring 2023-10-12 10:57:52 +03:00
Diamantis Tziotzios 6b2fae03dd no message 2023-10-12 10:57:38 +03:00
George Kalampokis b845450ebd Update Swagger ui 2023-10-12 10:55:48 +03:00
Efstratios Giannopoulos 968f45d5b3 authn refactor 2023-10-11 17:53:12 +03:00
Efstratios Giannopoulos 8b05ee1d0f add cache yml 2023-10-11 10:09:46 +03:00
George Kalampokis de2f5e67fd Fix profile issue 2023-10-11 09:53:24 +03:00
George Kalampokis 755c79b7af Separate configuration to different files 2023-10-10 16:49:48 +03:00
George Kalampokis 166bea73bf Replace the old .properties configuration files with the .yml 2023-10-09 16:02:14 +03:00
Thomas Georgios Giannos 55aecd9c57 Updating description template type controller with apropriate auditing and logging, added censor, refactored query building to conform with other projects workflows 2023-10-09 11:17:16 +03:00
George Kalampokis cab2f1bc64 Add Environment variables 2023-10-09 10:38:46 +03:00
George Kalampokis b5cbe6a3d8 Merge remote-tracking branch 'origin/dmp-refactoring' into dmp-refactoring 2023-10-06 18:11:11 +03:00
George Kalampokis 70308db668 Add Authentication support for the remote fetcher and rework dataset template's autocomplete sources 2023-10-06 18:07:58 +03:00