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180 Commits

Author SHA1 Message Date
Efstratios Giannopoulos 57facf98e5 DescriptionTemplate refactor 2023-10-27 18:46:34 +03:00
amentis 92c165e904 add references definition xml,builder, persist 2023-10-27 17:35:35 +03:00
Thomas Georgios Giannos 60ca51fe00 Adding DescriptionReference entity stack (former Dataset*** entities) 2023-10-27 11:59:37 +03:00
George Kalampokis d983e1e38e Add Deposit Security 2023-10-26 18:04:55 +03:00
amentis aecac1995d rename External Reference to Reference 2023-10-26 14:38:18 +03:00
Diamantis Tziotzios 4eca9b32c9 various backend fixes 2023-10-26 11:21:33 +03:00
Thomas Georgios Giannos 9a78d98751 Updating permissions.yml for dmps, entity_dois and descriptions 2023-10-25 16:55:10 +03:00
amentis bf8edfad92 add ExternalReference, DmpExternalReference entities 2023-10-24 18:47:13 +03:00
Efstratios Giannopoulos de566729f1 DmpBlueprint refactor 2023-10-24 18:00:11 +03:00
Efstratios Giannopoulos 6cde8ae2a9 add cross origin config 2023-10-23 11:15:08 +03:00
Efstratios Giannopoulos 88088d64fd DmpBlueprint refactor 2023-10-20 19:13:57 +03:00
Efstratios Giannopoulos ce8ff28955 Merge branch 'dmp-refactoring' of code-repo.d4science.org:MaDgiK-CITE/argos into dmp-refactoring 
# Conflicts:
#	dmp-backend/data/src/main/java/eu/eudat/data/dao/entities/EntityDoiDao.java
#	dmp-backend/data/src/main/java/eu/eudat/data/dao/entities/EntityDoiDaoImpl.java
#	dmp-backend/web/src/main/java/eu/eudat/logic/managers/DataManagementPlanManager.java
#	dmp-backend/web/src/main/java/eu/eudat/logic/managers/DepositManager.java
 2023-10-18 19:03:35 +03:00
Efstratios Giannopoulos 52e59ac11c task #9088 Authorization model should be changed to be Permission based 2023-10-18 18:52:03 +03:00
George Kalampokis dc752f73ca Partially fix Deposit Logic and add support for upcomming micro-services 2023-10-18 18:15:52 +03:00
amentis ad91234fd9 Merge remote-tracking branch 'origin/dmp-refactoring' into dmp-refactoring 2023-10-18 12:28:13 +03:00
amentis 17bb6bd4b0 add Supportive Material 2023-10-18 12:26:57 +03:00
Efstratios Giannopoulos 27bcc31e54 task #9088 Authorization model should be changed to be Permission based 2023-10-18 12:10:24 +03:00
amentis 3dee4857f8 Merge branch 'dmp-refactoring' of https://code-repo.d4science.org/MaDgiK-CITE/argos into dmp-refactoring 
 Conflicts:
	dmp-frontend/src/assets/config/config.json
 2023-10-18 10:33:59 +03:00
amentis f67ada842e commit 2023-10-18 10:31:57 +03:00
Efstratios Giannopoulos b3a73a50aa task #9088 Authorization model should be changed to be Permission based 2023-10-17 17:13:34 +03:00
Efstratios Giannopoulos 7ed111e936 task #9088 Authorization model should be changed to be Permission based 2023-10-17 15:22:05 +03:00
Efstratios Giannopoulos bd2807fbdf remove zenodo from user info 2023-10-17 12:40:47 +03:00
George Kalampokis a9a3273f62 Fix compilation errors and fix swagger ui description formatting 2023-10-13 09:50:22 +03:00
Efstratios Giannopoulos 5009d658ed task #9045 Refactor authentication mechanism to support using Keycloak 2023-10-12 16:16:19 +03:00
Efstratios Giannopoulos 055d29b95f Merge branch 'dmp-refactoring' of code-repo.d4science.org:MaDgiK-CITE/argos into dmp-refactoring 
# Conflicts:
#	dmp-backend/web/pom.xml
#	dmp-backend/web/src/main/resources/config/application.yml
 2023-10-12 12:04:26 +03:00
George Kalampokis b845450ebd Update Swagger ui 2023-10-12 10:55:48 +03:00
Efstratios Giannopoulos 968f45d5b3 authn refactor 2023-10-11 17:53:12 +03:00
Efstratios Giannopoulos 8b05ee1d0f add cache yml 2023-10-11 10:09:46 +03:00
George Kalampokis de2f5e67fd Fix profile issue 2023-10-11 09:53:24 +03:00
George Kalampokis 755c79b7af Separate configuration to different files 2023-10-10 16:49:48 +03:00
George Kalampokis 166bea73bf Replace the old .properties configuration files with the .yml 2023-10-09 16:02:14 +03:00
George Kalampokis cab2f1bc64 Add Environment variables 2023-10-09 10:38:46 +03:00
Thomas Georgios Giannos c7778e80b9 Adding missing auditing configuration property 2023-10-06 15:22:38 +03:00
Bernaldo Mihasi d996acdcc4 #8842 - add notification templates html files to application properties 2023-06-21 13:09:20 +03:00
Bernaldo Mihasi dfa2f0cd38 #8737 - make elastic fetch 100 inner hits instead of the default 3. 2023-06-21 12:05:51 +03:00
Bernaldo Mihasi 3d367b0589 #8765 - make pids coming from apis as hypelinks in export 2023-06-21 12:00:20 +03:00
Bernaldo Mihasi b2f2a79a5d add unlink functionality in profile section, when an email is unlinked that account is starting from scratch resulting in an empty dashboard. 2023-05-23 17:15:11 +03:00
Bernaldo Mihasi 5e764559cf fix typo (semantics) 2023-05-19 12:34:08 +03:00
Bernaldo Mihasi 8c30c558b2 User Guide, ToS, FAQ, Glossary, About html pages can now be dynamically updated so that they can be changed per installation. 2023-04-26 17:25:59 +03:00
Bernaldo Mihasi c35bc2efed remove rda property from models 2023-03-27 14:52:37 +03:00
Bernaldo Mihasi e2505039df cleanup unused code 2023-02-21 14:09:33 +02:00
Bernaldo Mihasi 9a8fc5e92e schematics implementation, xml import export of dataset profiles 2023-02-21 11:46:44 +02:00
George Kalampokis 0888b7cd74 Enable health and metrics built-in endpoints 2022-11-21 14:06:59 +02:00
Diamantis Tziotzios 0cd20605f0 user guide image update 2022-11-02 15:39:42 +02:00
Bernaldo Mihasi 2b692fa579 fix public api paths 2022-10-10 11:56:48 +03:00
Bernaldo Mihasi 5087a37e15 dockerization 2022-09-13 10:35:56 +03:00
Konstantina Galouni a2228a5fb6 #7597, #7893, #7895, #7898: Updated DMP template file (h2020.docx) for export | Added Dataset template file (h2020_dataset.docx) for export | Updated indentation on exported docs. 
1. h2020.docx, h2020_dataset.docx: Updated DMP template & Added Dataset template.
2. application.properties, application-devel.properties, application-production.properties, application-staging.properties: Added property for dataset template file path configuration.h2020datasettemplate=documents/h2020_dataset.docx
3. ConfigLoader.java: Added method XWPFDocument getDatasetDocument();
4. DefaultConfigLoader.java: Added fiedls and methods for loading Dataset template (h2020_dataset.docx).
5. DataManagementPlanManager.java, DatasetManager.java, , HtmlToWorldBuilder.java, WordBuilder.java: Updated header/footer/first page in exports for DMPs and Datasets  | Updated indentation in exports.
 2022-07-26 17:00:54 +03:00
Diamantis Tziotzios 2ecce0acb0 elastic conf changes 2022-06-14 14:22:59 +03:00
Bernaldo Mihasi 3433f58506 Add ssl support for elasticsearch 2022-06-08 16:23:49 +03:00
Konstantina Galouni 2a9d8b8296 #7528: [NEW] Upload files field type. 
1. Datasets.java: In "delete()" method, call also fileManager.markAllFilesOfEntityIdAsDeleted.
2. DatasetManager.java: Added method "deleteOldFilesAndAddNew()" which is called by "createOrUpdate()", to mark as deleted files that are not used any more and save the new ones.
3. DatabaseRepository.java & DatabaseRepositoryImpl.java: Include in DAOs FileUploadDAO.
4. ModelBuilder.java & ViewStyle.java: Incluse "upload" field type.
5. field-data.ts:
	a. In "getOrdinal()" method return Integer instead of int.
	b. In "getValidations()" method added null check.
	c. In methods "fromJsonObject()" and "toMap()" added special if clauses for "upload" field type.
6. application.properties:
   a. Added property "file.storage", to set the folder where the files will be permanently saved.
   b. Changed default spring.servlet.multipart.max-file-size and pring.servlet.multipart.max-request-size to 10 MB.
7. UserInvitationController.java: Deleted a print in System.out.
8. New files for upload field type: FileUploadDao.java, FileUploadDaoImpl.java, FileUpload.java, PostgreSQLEnumType.java (necessary for the enum EntityType), FileController.java, FileManager.java, UploadData.java.
 2022-03-16 12:14:08 +02:00
George Kalampokis ea72f64ed4 Replace DB DOIFunder with a json config file 2022-03-01 14:37:49 +02:00
Bernaldo Mihasi 641088e289 Remove local configs, commited by mistake 2022-01-12 16:31:07 +02:00
DESKTOP-4ES9U2E\aldom 16c124cc3d Merge branch 'Development' of https://code-repo.d4science.org/MaDgiK-CITE/argos into Development 
# Conflicts:
#	dmp-backend/web/src/main/java/eu/eudat/models/rda/mapper/DatasetIdRDAMapper.java
#	dmp-backend/web/src/main/java/eu/eudat/models/rda/mapper/DatasetRDAMapper.java
#	dmp-backend/web/src/main/java/eu/eudat/models/rda/mapper/DistributionRDAMapper.java
#	dmp-backend/web/src/main/java/eu/eudat/models/rda/mapper/HostRDAMapper.java
#	dmp-backend/web/src/main/java/eu/eudat/models/rda/mapper/KeywordRDAMapper.java
#	dmp-backend/web/src/main/java/eu/eudat/models/rda/mapper/LicenseRDAMapper.java
#	dmp-backend/web/src/main/java/eu/eudat/models/rda/mapper/SecurityAndPrivacyRDAMapper.java
#	dmp-backend/web/src/main/java/eu/eudat/models/rda/mapper/TechnicalResourceRDAMapper.java
 2021-12-30 11:28:15 +02:00
George Kalampokis 1a373bc6f8 Add email notification when a user is added to a Dataset Template (ref #7148) 2021-11-09 14:23:22 +02:00
George Kalampokis 2c29469590 Allow to configure the path of the email templates (ref #7122) 2021-10-25 16:06:08 +03:00
George Kalampokis 0257ff713b Remove the actuator from the prometheus path 2021-09-07 10:29:57 +03:00
George Kalampokis 6f92409f1e Update Spring boot framework to version 2.5.2 2021-09-07 09:42:31 +03:00
George Kalampokis 501ca9fcc2 Put elastic search index into the configurations 2021-04-27 16:53:15 +03:00
George Kalampokis aca31dc9da Add prometheus integration (ref #294) 2021-04-09 19:05:04 +03:00
apapachristou 2ed101888d fix syntax on application-devel.properties 2020-12-14 19:37:06 +02:00
Diamantis Tziotzios af5ab43c2e db pool connection fix 2020-12-14 19:23:10 +02:00
George Kalampokis fcd24fd907 Add community when depositing to zenodo (ARGOS). 2020-11-23 18:16:32 +02:00
George Kalampokis 66358acfcf Replace the openDMP Affiliation on Zenodo with either a configurable 
affiliation or the related organizations of the DMP
 2020-11-19 18:39:25 +02:00
Diamantis Tziotzios 0d408ff68a fixes 2020-10-05 12:08:57 +03:00
George Kalampokis 5cc6a5117a Fixed path issue with externalUrls on devel (backend) 2020-07-17 16:11:40 +03:00
George Kalampokis ac43dc8bd9 Updated application-devel.properties language.path 2020-06-17 17:32:52 +03:00
George Kalampokis ddd0b60d37 Load various resources from classpath instead of an actual path on Stagging and Production 2020-06-16 11:19:27 +03:00
George Kalampokis 33423b92f6 Removed HTTP-Logger (deprecated) 2020-06-10 13:18:04 +03:00
George Kalampokis 7695772d55 Updated production settings 2020-06-09 18:01:26 +03:00
George Kalampokis 5b0a66ce06 Removed deprecated configurations and added additional RDA Common Standards for dataset Templates 2020-05-29 11:57:21 +03:00
George Kalampokis af62e192ae Improved deployment 2020-05-12 13:10:23 +03:00
George Kalampokis 5d6fbd3e37 Improve self deployment 2020-05-04 17:15:52 +03:00
George Kalampokis 75fc400349 Added postgres on docker compose 2020-04-29 14:03:19 +03:00
George Kalampokis d67e68d0d9 Improve self deployment 2020-04-27 16:21:03 +03:00
George Kalampokis f39c113b7b Add Zenodo Login and the ability to use it's access token for DOI creation 2020-04-07 18:42:31 +03:00
George Kalampokis 78753404b5 Add temp folder for downloading DMP exported files 2020-03-30 18:24:19 +03:00
Diamantis Tziotzios d5c5c9743b conf changes 2020-03-24 17:08:03 +02:00
Diamantis Tziotzios ce8f838537 profile changes 2020-03-11 12:26:51 +02:00
George Kalampokis c807d28c29 Updated Elastic stack in order to store log files and add (expirimental) dataset index 2020-03-09 16:47:32 +02:00
George Kalampokis bf60e661ab Refactor backend resources and added logback configurations 2020-03-03 11:09:27 +02:00