Merge branch 'dmp-refactoring' of https://code-repo.d4science.org/MaDgiK-CITE/argos into dmp-refactoring

# Conflicts:
#	dmp-frontend/src/assets/i18n/en.json
This commit is contained in:
Sofia Papacharalampous 2024-03-13 09:47:38 +02:00
commit e7cb7f44d3
156 changed files with 1934 additions and 1166 deletions

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@ -42,9 +42,10 @@ queue:
options: options:
exchange: null exchange: null
tenant-removal-topic: tenant.remove tenant-removal-topic: tenant.remove
tenant-touched-topic: tenant.touch tenant-touch-topic: tenant.touch
user-removal-topic: user.remove user-removal-topic: user.remove
user-touched-topic: user.touch user-touch-topic: user.touch
annotation-entity-touch-topic: annotation.entity.touch
rabbitmq: rabbitmq:
enable: false enable: false
interval-seconds: 30 interval-seconds: 30

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@ -51,4 +51,9 @@ public class AuditableAction {
public static final EventId Annotation_Persist = new EventId(24002, "Annotation_Persist"); public static final EventId Annotation_Persist = new EventId(24002, "Annotation_Persist");
public static final EventId Annotation_Delete = new EventId(24003, "Annotation_Delete"); public static final EventId Annotation_Delete = new EventId(24003, "Annotation_Delete");
public static final EventId Entity_User_Query = new EventId(25000, "Entity_User_Query");
public static final EventId Entity_User_Lookup = new EventId(25001, "Entity_User_Lookup");
public static final EventId Entity_User_Persist = new EventId(25002, "Entity_User_Persist");
public static final EventId Entity_User_Delete = new EventId(25003, "Entity_User_Delete");
} }

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@ -0,0 +1,43 @@
package gr.cite.annotation.common.validation;
import gr.cite.annotation.convention.ConventionService;
import gr.cite.annotation.errorcode.ErrorThesaurusProperties;
import gr.cite.annotation.integrationevent.inbox.annotationentitytouch.AnnotationEntityTouchedIntegrationEvent;
import gr.cite.tools.validation.specification.Specification;
import org.springframework.beans.factory.config.ConfigurableBeanFactory;
import org.springframework.context.MessageSource;
import org.springframework.context.annotation.Scope;
import org.springframework.context.i18n.LocaleContextHolder;
import org.springframework.stereotype.Component;
import java.util.Arrays;
import java.util.List;
import java.util.UUID;
@Component(UuidValidator.ValidatorName)
@Scope(ConfigurableBeanFactory.SCOPE_PROTOTYPE)
public class UuidValidator extends BaseValidator<UUID> {
public static final String ValidatorName = "UuidValidator";
private final MessageSource messageSource;
protected UuidValidator(ConventionService conventionService, ErrorThesaurusProperties errors, MessageSource messageSource) {
super(conventionService, errors);
this.messageSource = messageSource;
}
@Override
protected Class<UUID> modelClass() {
return UUID.class;
}
@Override
protected List<Specification> specifications(UUID item) {
return Arrays.asList(
this.spec()
.must(() -> this.isValidGuid(item))
.failOn("uuid").failWith(messageSource.getMessage("Validation_Required", new Object[]{"uuid"}, LocaleContextHolder.getLocale()))
);
}
}

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@ -19,7 +19,6 @@ public class AnnotationEntity {
public static final String _id = "id"; public static final String _id = "id";
@Id
@Column(name = "entity_id", columnDefinition = "uuid", nullable = false) @Column(name = "entity_id", columnDefinition = "uuid", nullable = false)
private UUID entityId; private UUID entityId;

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@ -12,19 +12,17 @@ import java.util.UUID;
public class EntityUserEntity { public class EntityUserEntity {
@Id @Id
@Column(name = "id", columnDefinition = "uuid", updatable = false, nullable = false) @Column(name = "\"id\"", columnDefinition = "uuid", updatable = false, nullable = false)
private UUID id; private UUID id;
public static final String _id = "id"; public static final String _id = "id";
@Id @Column(name = "\"entity_id\"", columnDefinition = "uuid", nullable = false)
@Column(name = "id", columnDefinition = "uuid", nullable = false)
private UUID entityId; private UUID entityId;
public static final String _entityId = "entityId"; public static final String _entityId = "entityId";
@Id @Column(name = "\"user_id\"", columnDefinition = "uuid", nullable = false)
@Column(name = "id", columnDefinition = "uuid", nullable = false)
private UUID userId; private UUID userId;
public static final String _userId = "userId"; public static final String _userId = "userId";

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@ -33,9 +33,10 @@ public class AppRabbitConfigurer extends RabbitConfigurer {
public InboxBindings inboxBindingsCreator() { public InboxBindings inboxBindingsCreator() {
List<String> bindingItems = new ArrayList<>(); List<String> bindingItems = new ArrayList<>();
bindingItems.addAll(this.inboxProperties.getTenantRemovalTopic()); bindingItems.addAll(this.inboxProperties.getTenantRemovalTopic());
bindingItems.addAll(this.inboxProperties.getTenantTouchedTopic()); bindingItems.addAll(this.inboxProperties.getTenantTouchTopic());
bindingItems.addAll(this.inboxProperties.getUserRemovalTopic()); bindingItems.addAll(this.inboxProperties.getUserRemovalTopic());
bindingItems.addAll(this.inboxProperties.getUserTouchedTopic()); bindingItems.addAll(this.inboxProperties.getUserTouchTopic());
bindingItems.addAll(this.inboxProperties.getAnnotationEntityTouchTopic());
return new InboxBindings(bindingItems); return new InboxBindings(bindingItems);
} }

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@ -11,39 +11,47 @@ public class InboxProperties {
private final List<String> tenantRemovalTopic; private final List<String> tenantRemovalTopic;
private final List<String> tenantTouchedTopic; private final List<String> tenantTouchTopic;
private final List<String> userRemovalTopic; private final List<String> userRemovalTopic;
private final List<String> userTouchedTopic; private final List<String> userTouchTopic;
private final List<String> annotationEntityTouchTopic;
public InboxProperties( public InboxProperties(
String exchange, String exchange,
List<String> tenantRemovalTopic, List<String> tenantRemovalTopic,
List<String> tenantTouchedTopic, List<String> tenantTouchTopic,
List<String> userRemovalTopic, List<String> userRemovalTopic,
List<String> userTouchedTopic) { List<String> userTouchTopic,
List<String> annotationEntityTouchTopic) {
this.exchange = exchange; this.exchange = exchange;
this.tenantRemovalTopic = tenantRemovalTopic; this.tenantRemovalTopic = tenantRemovalTopic;
this.tenantTouchedTopic = tenantTouchedTopic; this.tenantTouchTopic = tenantTouchTopic;
this.userRemovalTopic = userRemovalTopic; this.userRemovalTopic = userRemovalTopic;
this.userTouchedTopic = userTouchedTopic; this.userTouchTopic = userTouchTopic;
this.annotationEntityTouchTopic = annotationEntityTouchTopic;
} }
public List<String> getTenantRemovalTopic() { public List<String> getTenantRemovalTopic() {
return tenantRemovalTopic; return tenantRemovalTopic;
} }
public List<String> getTenantTouchedTopic() { public List<String> getTenantTouchTopic() {
return tenantTouchedTopic; return tenantTouchTopic;
} }
public List<String> getUserRemovalTopic() { public List<String> getUserRemovalTopic() {
return userRemovalTopic; return userRemovalTopic;
} }
public List<String> getUserTouchedTopic() { public List<String> getUserTouchTopic() {
return userTouchedTopic; return userTouchTopic;
}
public List<String> getAnnotationEntityTouchTopic() {
return annotationEntityTouchTopic;
} }
public String getExchange() { public String getExchange() {

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@ -5,10 +5,11 @@ import gr.cite.annotation.common.enums.IsActive;
import gr.cite.annotation.common.scope.fake.FakeRequestScope; import gr.cite.annotation.common.scope.fake.FakeRequestScope;
import gr.cite.annotation.data.QueueInboxEntity; import gr.cite.annotation.data.QueueInboxEntity;
import gr.cite.annotation.integrationevent.TrackedEvent; import gr.cite.annotation.integrationevent.TrackedEvent;
import gr.cite.annotation.integrationevent.inbox.annotationentitytouch.AnnotationEntityTouchedIntegrationEventHandler;
import gr.cite.annotation.integrationevent.inbox.tenantremoval.TenantRemovalIntegrationEventHandler; import gr.cite.annotation.integrationevent.inbox.tenantremoval.TenantRemovalIntegrationEventHandler;
import gr.cite.annotation.integrationevent.inbox.tenanttouched.TenantTouchedIntegrationEventHandler; import gr.cite.annotation.integrationevent.inbox.tenanttouch.TenantTouchedIntegrationEventHandler;
import gr.cite.annotation.integrationevent.inbox.userremoval.UserRemovalIntegrationEventHandler; import gr.cite.annotation.integrationevent.inbox.userremoval.UserRemovalIntegrationEventHandler;
import gr.cite.annotation.integrationevent.inbox.usertouched.UserTouchedIntegrationEventHandler; import gr.cite.annotation.integrationevent.inbox.usertouch.UserTouchedIntegrationEventHandler;
import gr.cite.annotation.query.QueueInboxQuery; import gr.cite.annotation.query.QueueInboxQuery;
import gr.cite.queueinbox.entity.QueueInbox; import gr.cite.queueinbox.entity.QueueInbox;
import gr.cite.queueinbox.entity.QueueInboxStatus; import gr.cite.queueinbox.entity.QueueInboxStatus;
@ -325,12 +326,14 @@ public class InboxRepositoryImpl implements InboxRepository {
logger.debug("Processing message with routing key '{}'", routingKey); logger.debug("Processing message with routing key '{}'", routingKey);
if (this.routingKeyMatched(routingKey, this.inboxProperties.getTenantRemovalTopic())) if (this.routingKeyMatched(routingKey, this.inboxProperties.getTenantRemovalTopic()))
handler = this.applicationContext.getBean(TenantRemovalIntegrationEventHandler.class); handler = this.applicationContext.getBean(TenantRemovalIntegrationEventHandler.class);
else if (this.routingKeyMatched(routingKey, this.inboxProperties.getTenantTouchedTopic())) else if (this.routingKeyMatched(routingKey, this.inboxProperties.getTenantTouchTopic()))
handler = this.applicationContext.getBean(TenantTouchedIntegrationEventHandler.class); handler = this.applicationContext.getBean(TenantTouchedIntegrationEventHandler.class);
else if (this.routingKeyMatched(routingKey, this.inboxProperties.getUserRemovalTopic())) else if (this.routingKeyMatched(routingKey, this.inboxProperties.getUserRemovalTopic()))
handler = this.applicationContext.getBean(UserRemovalIntegrationEventHandler.class); handler = this.applicationContext.getBean(UserRemovalIntegrationEventHandler.class);
else if (this.routingKeyMatched(routingKey, this.inboxProperties.getUserTouchedTopic())) else if (this.routingKeyMatched(routingKey, this.inboxProperties.getUserTouchTopic()))
handler = this.applicationContext.getBean(UserTouchedIntegrationEventHandler.class); handler = this.applicationContext.getBean(UserTouchedIntegrationEventHandler.class);
else if (this.routingKeyMatched(routingKey, this.inboxProperties.getAnnotationEntityTouchTopic()))
handler = this.applicationContext.getBean(AnnotationEntityTouchedIntegrationEventHandler.class);
else { else {
logger.error("No handler found for message routing key '{}'. Discarding.", routingKey); logger.error("No handler found for message routing key '{}'. Discarding.", routingKey);
handler = null; handler = null;

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@ -0,0 +1,86 @@
package gr.cite.annotation.integrationevent.inbox.annotationentitytouch;
import gr.cite.annotation.common.validation.BaseValidator;
import gr.cite.annotation.common.validation.UuidValidator;
import gr.cite.annotation.convention.ConventionService;
import gr.cite.annotation.errorcode.ErrorThesaurusProperties;
import gr.cite.annotation.integrationevent.TrackedEvent;
import gr.cite.tools.validation.ValidatorFactory;
import gr.cite.tools.validation.specification.Specification;
import org.springframework.beans.factory.config.ConfigurableBeanFactory;
import org.springframework.context.MessageSource;
import org.springframework.context.annotation.Scope;
import org.springframework.context.i18n.LocaleContextHolder;
import org.springframework.stereotype.Component;
import java.util.Arrays;
import java.util.List;
import java.util.UUID;
public class AnnotationEntityTouchedIntegrationEvent extends TrackedEvent {
private UUID entityId;
public static final String _entityId = "entityId";
private List<UUID> userIds;
public static final String _userIds = "userIds";
public UUID getEntityId() {
return entityId;
}
public void setEntityId(UUID entityId) {
this.entityId = entityId;
}
public List<UUID> getUserIds() {
return userIds;
}
public void setUserIds(List<UUID> userIds) {
this.userIds = userIds;
}
@Component(AnnotationEntityTouchedIntegrationEvent.AnnotationEntityTouchedIntegrationEventValidator.ValidatorName)
@Scope(ConfigurableBeanFactory.SCOPE_PROTOTYPE)
public static class AnnotationEntityTouchedIntegrationEventValidator extends BaseValidator<AnnotationEntityTouchedIntegrationEvent> {
public static final String ValidatorName = "AnnotationEntityTouchedIntegrationEventValidator";
private final MessageSource messageSource;
private final ValidatorFactory validatorFactory;
protected AnnotationEntityTouchedIntegrationEventValidator(ConventionService conventionService, ErrorThesaurusProperties errors, MessageSource messageSource, ValidatorFactory validatorFactory) {
super(conventionService, errors);
this.messageSource = messageSource;
this.validatorFactory = validatorFactory;
}
@Override
protected Class<AnnotationEntityTouchedIntegrationEvent> modelClass() {
return AnnotationEntityTouchedIntegrationEvent.class;
}
@Override
protected List<Specification> specifications(AnnotationEntityTouchedIntegrationEvent item) {
return Arrays.asList(
this.spec()
.iff(() -> !this.isNull(item.getEntityId()))
.must(() -> this.isValidGuid(item.getEntityId()))
.failOn(AnnotationEntityTouchedIntegrationEvent._entityId).failWith(messageSource.getMessage("Validation_Required", new Object[]{AnnotationEntityTouchedIntegrationEvent._entityId}, LocaleContextHolder.getLocale())),
this.spec()
.must(() -> !this.isListNullOrEmpty(item.getUserIds()))
.failOn(AnnotationEntityTouchedIntegrationEvent._userIds).failWith(messageSource.getMessage("Validation_Required", new Object[]{AnnotationEntityTouchedIntegrationEvent._userIds}, LocaleContextHolder.getLocale())),
this.navSpec()
.iff(() -> !this.isListNullOrEmpty(item.getUserIds()))
.on(AnnotationEntityTouchedIntegrationEvent._userIds)
.over(item.getUserIds())
.using((i) -> this.validatorFactory.validator(UuidValidator.class))
);
}
}
}

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@ -0,0 +1,7 @@
package gr.cite.annotation.integrationevent.inbox.annotationentitytouch;
import gr.cite.annotation.integrationevent.inbox.IntegrationEventHandler;
public interface AnnotationEntityTouchedIntegrationEventHandler extends IntegrationEventHandler {
}

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@ -0,0 +1,149 @@
package gr.cite.annotation.integrationevent.inbox.annotationentitytouch;
import gr.cite.annotation.audit.AuditableAction;
import gr.cite.annotation.common.JsonHandlingService;
import gr.cite.annotation.common.enums.IsActive;
import gr.cite.annotation.common.scope.fake.FakeRequestScope;
import gr.cite.annotation.data.EntityUserEntity;
import gr.cite.annotation.integrationevent.inbox.EventProcessingStatus;
import gr.cite.annotation.integrationevent.inbox.InboxPrincipal;
import gr.cite.annotation.integrationevent.inbox.IntegrationEventProperties;
import gr.cite.annotation.query.EntityUserQuery;
import gr.cite.commons.web.oidc.principal.CurrentPrincipalResolver;
import gr.cite.tools.auditing.AuditService;
import gr.cite.tools.data.query.QueryFactory;
import gr.cite.tools.logging.LoggerService;
import gr.cite.tools.validation.ValidatorFactory;
import jakarta.persistence.EntityManager;
import jakarta.persistence.EntityManagerFactory;
import jakarta.persistence.EntityTransaction;
import jakarta.persistence.OptimisticLockException;
import org.slf4j.LoggerFactory;
import org.springframework.beans.factory.config.ConfigurableBeanFactory;
import org.springframework.context.ApplicationContext;
import org.springframework.context.annotation.Scope;
import org.springframework.stereotype.Component;
import java.time.Instant;
import java.util.AbstractMap;
import java.util.List;
import java.util.Map;
import java.util.UUID;
@Component
@Scope(value = ConfigurableBeanFactory.SCOPE_PROTOTYPE)
public class AnnotationEntityTouchedIntegrationEventHandlerImpl implements AnnotationEntityTouchedIntegrationEventHandler {
private static final LoggerService logger = new LoggerService(LoggerFactory.getLogger(AnnotationEntityTouchedIntegrationEventHandlerImpl.class));
private final JsonHandlingService jsonHandlingService;
private final ValidatorFactory validatorFactory;
private final ApplicationContext applicationContext;
private final QueryFactory queryFactory;
public AnnotationEntityTouchedIntegrationEventHandlerImpl(JsonHandlingService jsonHandlingService, ValidatorFactory validatorFactory, ApplicationContext applicationContext, QueryFactory queryFactory) {
this.jsonHandlingService = jsonHandlingService;
this.validatorFactory = validatorFactory;
this.applicationContext = applicationContext;
this.queryFactory = queryFactory;
}
@Override
public EventProcessingStatus handle(IntegrationEventProperties properties, String message) {
AnnotationEntityTouchedIntegrationEvent event = this.jsonHandlingService.fromJsonSafe(AnnotationEntityTouchedIntegrationEvent.class, message);
if (event == null)
return EventProcessingStatus.Error;
logger.debug("Handling {}", AnnotationEntityTouchedIntegrationEvent.class.getSimpleName());
this.validatorFactory.validator(AnnotationEntityTouchedIntegrationEvent.AnnotationEntityTouchedIntegrationEventValidator.class).validateForce(event);
EntityManager entityManager = null;
EntityTransaction transaction = null;
try (FakeRequestScope ignored = new FakeRequestScope()) {
try {
// QueryFactory queryFactory = this.applicationContext.getBean(QueryFactory.class);
// TenantScope scope = this.applicationContext.getBean(TenantScope.class);
// if (scope.isMultitenant() && event.getTenant() != null) {
// TenantEntity tenant = queryFactory.query(TenantQuery.class).ids(event.getTenant()).firstAs(new BaseFieldSet().ensure(Tenant._id).ensure(Tenant._code));
// if (tenant == null) {
// logger.error("missing tenant from event message");
// return EventProcessingStatus.Error;
// }
// scope.setTenant(event.getTenant(), tenant.getCode());
// } else if (scope.isMultitenant()) {
// logger.error("missing tenant from event message");
// return EventProcessingStatus.Error;
// }
//
// ValidationService validator = this.applicationContext.getBean(ValidationService.class);
// validator.validateForce(model);
CurrentPrincipalResolver currentPrincipalResolver = this.applicationContext.getBean(CurrentPrincipalResolver.class);
currentPrincipalResolver.push(InboxPrincipal.build(properties));
EntityManagerFactory entityManagerFactory = this.applicationContext.getBean(EntityManagerFactory.class);
entityManager = entityManagerFactory.createEntityManager();
transaction = entityManager.getTransaction();
transaction.begin();
try {
EntityUserQuery entityUserQuery = this.queryFactory.query(EntityUserQuery.class);
List<EntityUserEntity> associatedUsersEntities = entityUserQuery
.entityIds(event.getEntityId())
.isActive(IsActive.Active)
.collect();
List<UUID> associatedUsers = associatedUsersEntities.stream()
.map(EntityUserEntity::getUserId)
.toList();
for (UUID user : event.getUserIds()) {
if (!associatedUsers.contains(user)) {
EntityUserEntity entityUserEntity = new EntityUserEntity();
entityUserEntity.setId(UUID.randomUUID());
entityUserEntity.setEntityId(event.getEntityId());
entityUserEntity.setUserId(user);
entityUserEntity.setCreatedAt(Instant.now());
entityUserEntity.setUpdatedAt(Instant.now());
entityUserEntity.setIsActive(IsActive.Active);
entityManager.persist(entityUserEntity);
}
}
AuditService auditService = this.applicationContext.getBean(AuditService.class);
auditService.track(AuditableAction.User_Persist, Map.ofEntries(
new AbstractMap.SimpleEntry<String, Object>("model", event)
));
transaction.commit();
} catch (Exception e) {
transaction.rollback();
throw e;
} finally {
currentPrincipalResolver.pop();
}
} catch (OptimisticLockException ex) {
// we get this if/when someone else already modified the notifications. We want to essentially ignore this, and keep working
logger.debug("Concurrency exception getting queue outbox. Skipping: {} ", ex.getMessage());
if (transaction != null)
transaction.rollback();
} catch (Exception ex) {
logger.error("Problem getting list of queue outbox. Skipping: {}", ex.getMessage(), ex);
if (transaction != null)
transaction.rollback();
} finally {
if (entityManager != null)
entityManager.close();
}
} catch (Exception ex) {
logger.error("Problem getting list of queue outbox. Skipping: {}", ex.getMessage(), ex);
}
return EventProcessingStatus.Success;
}
}

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@ -1,4 +1,4 @@
package gr.cite.annotation.integrationevent.inbox.tenanttouched; package gr.cite.annotation.integrationevent.inbox.tenanttouch;
import gr.cite.annotation.integrationevent.TrackedEvent; import gr.cite.annotation.integrationevent.TrackedEvent;

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@ -1,4 +1,4 @@
package gr.cite.annotation.integrationevent.inbox.tenanttouched; package gr.cite.annotation.integrationevent.inbox.tenanttouch;
import gr.cite.annotation.integrationevent.inbox.IntegrationEventHandler; import gr.cite.annotation.integrationevent.inbox.IntegrationEventHandler;

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@ -1,4 +1,4 @@
package gr.cite.annotation.integrationevent.inbox.tenanttouched; package gr.cite.annotation.integrationevent.inbox.tenanttouch;
import gr.cite.commons.web.oidc.principal.CurrentPrincipalResolver; import gr.cite.commons.web.oidc.principal.CurrentPrincipalResolver;
import gr.cite.annotation.audit.AuditableAction; import gr.cite.annotation.audit.AuditableAction;

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@ -1,4 +1,4 @@
package gr.cite.annotation.integrationevent.inbox.usertouched; package gr.cite.annotation.integrationevent.inbox.usertouch;
import gr.cite.annotation.common.enums.ContactInfoType; import gr.cite.annotation.common.enums.ContactInfoType;
import gr.cite.annotation.common.validation.BaseValidator; import gr.cite.annotation.common.validation.BaseValidator;

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@ -1,4 +1,4 @@
package gr.cite.annotation.integrationevent.inbox.usertouched; package gr.cite.annotation.integrationevent.inbox.usertouch;
import gr.cite.annotation.integrationevent.inbox.IntegrationEventHandler; import gr.cite.annotation.integrationevent.inbox.IntegrationEventHandler;

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@ -1,4 +1,4 @@
package gr.cite.annotation.integrationevent.inbox.usertouched; package gr.cite.annotation.integrationevent.inbox.usertouch;
import gr.cite.commons.web.oidc.principal.CurrentPrincipalResolver; import gr.cite.commons.web.oidc.principal.CurrentPrincipalResolver;
import gr.cite.annotation.audit.AuditableAction; import gr.cite.annotation.audit.AuditableAction;

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@ -3,7 +3,7 @@ package gr.cite.annotation.model.persist;
import gr.cite.annotation.common.validation.BaseValidator; import gr.cite.annotation.common.validation.BaseValidator;
import gr.cite.annotation.convention.ConventionService; import gr.cite.annotation.convention.ConventionService;
import gr.cite.annotation.errorcode.ErrorThesaurusProperties; import gr.cite.annotation.errorcode.ErrorThesaurusProperties;
import gr.cite.annotation.integrationevent.inbox.usertouched.UserTouchedIntegrationEvent; import gr.cite.annotation.integrationevent.inbox.usertouch.UserTouchedIntegrationEvent;
import gr.cite.tools.validation.specification.Specification; import gr.cite.tools.validation.specification.Specification;
import org.springframework.beans.factory.config.ConfigurableBeanFactory; import org.springframework.beans.factory.config.ConfigurableBeanFactory;
import org.springframework.context.MessageSource; import org.springframework.context.MessageSource;

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@ -0,0 +1,146 @@
package gr.cite.annotation.query;
import gr.cite.annotation.authorization.AuthorizationFlags;
import gr.cite.annotation.common.enums.IsActive;
import gr.cite.annotation.data.EntityUserEntity;
import gr.cite.tools.data.query.FieldResolver;
import gr.cite.tools.data.query.QueryBase;
import gr.cite.tools.data.query.QueryContext;
import jakarta.persistence.Tuple;
import jakarta.persistence.criteria.CriteriaBuilder;
import jakarta.persistence.criteria.Predicate;
import org.springframework.stereotype.Component;
import org.springframework.web.context.annotation.RequestScope;
import java.util.*;
@Component
@RequestScope
public class EntityUserQuery extends QueryBase<EntityUserEntity> {
private Collection<UUID> ids, entityIds, userIds;
private Collection<IsActive> isActives;
private EnumSet<AuthorizationFlags> authorize = EnumSet.of(AuthorizationFlags.None);
public EntityUserQuery ids(UUID value) {
this.ids = List.of(value);
return this;
}
public EntityUserQuery ids(UUID... value) {
this.ids = Arrays.asList(value);
return this;
}
public EntityUserQuery ids(Collection<UUID> values) {
this.ids = values;
return this;
}
public EntityUserQuery entityIds(UUID value) {
this.entityIds = List.of(value);
return this;
}
public EntityUserQuery entityIds(UUID... value) {
this.entityIds = Arrays.asList(value);
return this;
}
public EntityUserQuery entityIds(Collection<UUID> values) {
this.entityIds = values;
return this;
}
public EntityUserQuery userIds(UUID value) {
this.userIds = List.of(value);
return this;
}
public EntityUserQuery userIds(UUID... value) {
this.userIds = Arrays.asList(value);
return this;
}
public EntityUserQuery userIds(Collection<UUID> values) {
this.userIds = values;
return this;
}
public EntityUserQuery isActive(IsActive value) {
this.isActives = List.of(value);
return this;
}
public EntityUserQuery isActive(IsActive... value) {
this.isActives = Arrays.asList(value);
return this;
}
public EntityUserQuery isActive(Collection<IsActive> values) {
this.isActives = values;
return this;
}
public EntityUserQuery authorize(EnumSet<AuthorizationFlags> values) {
this.authorize = values;
return this;
}
@Override
protected Boolean isFalseQuery() {
return false;
}
@Override
protected Class<EntityUserEntity> entityClass() {
return EntityUserEntity.class;
}
@Override
protected <X, Y> Predicate applyFilters(QueryContext<X, Y> queryContext) {
List<Predicate> predicates = new ArrayList<>();
if (this.ids != null) {
CriteriaBuilder.In<UUID> inClause = queryContext.CriteriaBuilder.in(queryContext.Root.get(EntityUserEntity._id));
for (UUID item : this.ids)
inClause.value(item);
predicates.add(inClause);
}
if (this.entityIds != null) {
CriteriaBuilder.In<UUID> inClause = queryContext.CriteriaBuilder.in(queryContext.Root.get(EntityUserEntity._entityId));
for (UUID item : this.entityIds)
inClause.value(item);
predicates.add(inClause);
}
if (this.userIds != null) {
CriteriaBuilder.In<UUID> inClause = queryContext.CriteriaBuilder.in(queryContext.Root.get(EntityUserEntity._userId));
for (UUID item : this.userIds)
inClause.value(item);
predicates.add(inClause);
}
if (this.isActives != null) {
CriteriaBuilder.In<IsActive> inClause = queryContext.CriteriaBuilder.in(queryContext.Root.get(EntityUserEntity._isActive));
for (IsActive item : this.isActives)
inClause.value(item);
predicates.add(inClause);
}
if (!predicates.isEmpty()) {
Predicate[] predicatesArray = predicates.toArray(new Predicate[0]);
return queryContext.CriteriaBuilder.and(predicatesArray);
} else {
return null;
}
}
@Override
protected String fieldNameOf(FieldResolver item) {
return null;
}
@Override
protected EntityUserEntity convert(Tuple tuple, Set<String> columns) {
return null;
}
}

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@ -1,6 +1,5 @@
package gr.cite.annotation.query; package gr.cite.annotation.query;
import gr.cite.commons.web.authz.service.AuthorizationService;
import gr.cite.annotation.authorization.AuthorizationFlags; import gr.cite.annotation.authorization.AuthorizationFlags;
import gr.cite.annotation.authorization.Permission; import gr.cite.annotation.authorization.Permission;
import gr.cite.annotation.common.enums.IsActive; import gr.cite.annotation.common.enums.IsActive;
@ -8,6 +7,7 @@ import gr.cite.annotation.common.scope.user.UserScope;
import gr.cite.annotation.data.UserEntity; import gr.cite.annotation.data.UserEntity;
import gr.cite.annotation.model.User; import gr.cite.annotation.model.User;
import gr.cite.annotation.model.user.PublicUser; import gr.cite.annotation.model.user.PublicUser;
import gr.cite.commons.web.authz.service.AuthorizationService;
import gr.cite.tools.data.query.FieldResolver; import gr.cite.tools.data.query.FieldResolver;
import gr.cite.tools.data.query.QueryBase; import gr.cite.tools.data.query.QueryBase;
import gr.cite.tools.data.query.QueryContext; import gr.cite.tools.data.query.QueryContext;
@ -25,12 +25,15 @@ import java.util.*;
public class UserQuery extends QueryBase<UserEntity> { public class UserQuery extends QueryBase<UserEntity> {
private String like; private String like;
private Collection<UUID> ids; private Collection<UUID> ids;
private Collection<IsActive> isActives; private Collection<IsActive> isActives;
private EnumSet<AuthorizationFlags> authorize = EnumSet.of(AuthorizationFlags.None); private EnumSet<AuthorizationFlags> authorize = EnumSet.of(AuthorizationFlags.None);
private final UserScope userScope; private final UserScope userScope;
private final AuthorizationService authService; private final AuthorizationService authService;
public UserQuery( public UserQuery(
@ -93,16 +96,19 @@ public class UserQuery extends QueryBase<UserEntity> {
@Override @Override
protected <X, Y> Predicate applyAuthZ(QueryContext<X, Y> queryContext) { protected <X, Y> Predicate applyAuthZ(QueryContext<X, Y> queryContext) {
if (this.authorize.contains(AuthorizationFlags.None)) return null; if (this.authorize.contains(AuthorizationFlags.None))
if (this.authorize.contains(AuthorizationFlags.Permission) && this.authService.authorize(Permission.BrowseUser)) return null; return null;
if (this.authorize.contains(AuthorizationFlags.Permission) && this.authService.authorize(Permission.BrowseUser))
return null;
UUID ownerId = null; UUID ownerId = null;
if (this.authorize.contains(AuthorizationFlags.Owner)) ownerId = this.userScope.getUserIdSafe(); if (this.authorize.contains(AuthorizationFlags.Owner))
ownerId = this.userScope.getUserIdSafe();
List<Predicate> predicates = new ArrayList<>(); List<Predicate> predicates = new ArrayList<>();
if (ownerId != null) { if (ownerId != null) {
predicates.add(queryContext.CriteriaBuilder.equal(queryContext.Root.get(User._id), ownerId)); predicates.add(queryContext.CriteriaBuilder.equal(queryContext.Root.get(User._id), ownerId));
} }
if (predicates.size() > 0) { if (!predicates.isEmpty()) {
Predicate[] predicatesArray = predicates.toArray(new Predicate[0]); Predicate[] predicatesArray = predicates.toArray(new Predicate[0]);
return queryContext.CriteriaBuilder.and(predicatesArray); return queryContext.CriteriaBuilder.and(predicatesArray);
} else { } else {
@ -115,7 +121,8 @@ public class UserQuery extends QueryBase<UserEntity> {
List<Predicate> predicates = new ArrayList<>(); List<Predicate> predicates = new ArrayList<>();
if (this.ids != null) { if (this.ids != null) {
CriteriaBuilder.In<UUID> inClause = queryContext.CriteriaBuilder.in(queryContext.Root.get(UserEntity._id)); CriteriaBuilder.In<UUID> inClause = queryContext.CriteriaBuilder.in(queryContext.Root.get(UserEntity._id));
for (UUID item : this.ids) inClause.value(item); for (UUID item : this.ids)
inClause.value(item);
predicates.add(inClause); predicates.add(inClause);
} }
if (this.like != null && !this.like.isEmpty()) { if (this.like != null && !this.like.isEmpty()) {
@ -123,10 +130,11 @@ public class UserQuery extends QueryBase<UserEntity> {
} }
if (this.isActives != null) { if (this.isActives != null) {
CriteriaBuilder.In<IsActive> inClause = queryContext.CriteriaBuilder.in(queryContext.Root.get(UserEntity._isActive)); CriteriaBuilder.In<IsActive> inClause = queryContext.CriteriaBuilder.in(queryContext.Root.get(UserEntity._isActive));
for (IsActive item : this.isActives) inClause.value(item); for (IsActive item : this.isActives)
inClause.value(item);
predicates.add(inClause); predicates.add(inClause);
} }
if (predicates.size() > 0) { if (!predicates.isEmpty()) {
Predicate[] predicatesArray = predicates.toArray(new Predicate[0]); Predicate[] predicatesArray = predicates.toArray(new Predicate[0]);
return queryContext.CriteriaBuilder.and(predicatesArray); return queryContext.CriteriaBuilder.and(predicatesArray);
} else { } else {
@ -148,12 +156,19 @@ public class UserQuery extends QueryBase<UserEntity> {
@Override @Override
protected String fieldNameOf(FieldResolver item) { protected String fieldNameOf(FieldResolver item) {
if (item.match(User._id) || item.match(PublicUser._id)) return UserEntity._id; if (item.match(User._id) || item.match(PublicUser._id))
else if (item.match(User._name) || item.match(PublicUser._name)) return UserEntity._name; return UserEntity._id;
else if (item.match(User._createdAt) ) return UserEntity._createdAt; else if (item.match(User._name) || item.match(PublicUser._name))
else if (item.match(User._updatedAt)) return UserEntity._updatedAt; return UserEntity._name;
else if (item.match(User._hash)) return UserEntity._updatedAt; else if (item.match(User._createdAt))
else if (item.match(User._isActive)) return UserEntity._isActive; return UserEntity._createdAt;
else return null; else if (item.match(User._updatedAt))
return UserEntity._updatedAt;
else if (item.match(User._hash))
return UserEntity._updatedAt;
else if (item.match(User._isActive))
return UserEntity._isActive;
else
return null;
} }
} }

View File

@ -1,7 +1,7 @@
package gr.cite.annotation.service.user; package gr.cite.annotation.service.user;
import com.fasterxml.jackson.core.JsonProcessingException; import com.fasterxml.jackson.core.JsonProcessingException;
import gr.cite.annotation.integrationevent.inbox.usertouched.UserTouchedIntegrationEvent; import gr.cite.annotation.integrationevent.inbox.usertouch.UserTouchedIntegrationEvent;
import gr.cite.annotation.model.User; import gr.cite.annotation.model.User;
import gr.cite.tools.exception.MyApplicationException; import gr.cite.tools.exception.MyApplicationException;
import gr.cite.tools.exception.MyForbiddenException; import gr.cite.tools.exception.MyForbiddenException;

View File

@ -10,7 +10,7 @@ import gr.cite.annotation.convention.ConventionService;
import gr.cite.annotation.data.UserContactInfoEntity; import gr.cite.annotation.data.UserContactInfoEntity;
import gr.cite.annotation.data.UserCredentialEntity; import gr.cite.annotation.data.UserCredentialEntity;
import gr.cite.annotation.data.UserEntity; import gr.cite.annotation.data.UserEntity;
import gr.cite.annotation.integrationevent.inbox.usertouched.UserTouchedIntegrationEvent; import gr.cite.annotation.integrationevent.inbox.usertouch.UserTouchedIntegrationEvent;
import gr.cite.annotation.model.User; import gr.cite.annotation.model.User;
import gr.cite.annotation.model.builder.UserBuilder; import gr.cite.annotation.model.builder.UserBuilder;
import gr.cite.annotation.model.deleter.UserDeleter; import gr.cite.annotation.model.deleter.UserDeleter;

View File

@ -50,12 +50,12 @@
<dependency> <dependency>
<groupId>gr.cite.opendmp</groupId> <groupId>gr.cite.opendmp</groupId>
<artifactId>common-models</artifactId> <artifactId>common-models</artifactId>
<version>0.0.2</version> <version>0.0.3</version>
</dependency> </dependency>
<dependency> <dependency>
<groupId>gr.cite.opendmp</groupId> <groupId>gr.cite.opendmp</groupId>
<artifactId>file-transformer-base</artifactId> <artifactId>file-transformer-base</artifactId>
<version>0.0.5</version> <version>0.0.6</version>
</dependency> </dependency>
<dependency> <dependency>
<groupId>gr.cite</groupId> <groupId>gr.cite</groupId>

View File

@ -40,7 +40,8 @@ public class AuditableAction {
public static final EventId Dmp_Invite_Users = new EventId(5008, "Dmp_Invite_Users"); public static final EventId Dmp_Invite_Users = new EventId(5008, "Dmp_Invite_Users");
public static final EventId Dmp_Invite_Accept = new EventId(5009, "Dmp_Invite_Accept"); public static final EventId Dmp_Invite_Accept = new EventId(5009, "Dmp_Invite_Accept");
public static final EventId Dmp_PublicQuery = new EventId(5010, "Dmp_PublicQuery"); public static final EventId Dmp_PublicQuery = new EventId(5010, "Dmp_PublicQuery");
public static final EventId Dmp_PublicLookup = new EventId(5011, "Dmp_PublicLookup"); public static final EventId Dmp_Export = new EventId(5011, "Dmp_Export");
public static final EventId Dmp_PublicLookup = new EventId(5012, "Dmp_PublicLookup");
public static final EventId Description_Query = new EventId(6000, "Description_Query"); public static final EventId Description_Query = new EventId(6000, "Description_Query");
public static final EventId Description_Lookup = new EventId(6001, "Description_Lookup"); public static final EventId Description_Lookup = new EventId(6001, "Description_Lookup");

View File

@ -4,5 +4,5 @@ import java.util.EnumSet;
public enum AuthorizationFlags { public enum AuthorizationFlags {
None, Permission, DmpAssociated, Public, Owner; None, Permission, DmpAssociated, Public, Owner;
public static final EnumSet<AuthorizationFlags> OwnerOrDmpAssociatedOrPermissionOrPublic = EnumSet.of(DmpAssociated, Permission, Public, Owner); public static final EnumSet<AuthorizationFlags> OwnerOrDmpAssociatedOrPermission = EnumSet.of(DmpAssociated, Permission, Owner);
} }

View File

@ -3,19 +3,15 @@ package eu.eudat.authorization;
public final class Permission { public final class Permission {
/////// Should Remove after Refactor /////// Should Remove after Refactor
public static String AnonymousRole = "AnonymousRole";
public static String AdminRole = "AdminRole"; public static String AdminRole = "AdminRole";
public static String ManagerRole = "ManagerRole";
public static String UserRole = "UserRole";
public static String AuthenticatedRole = "AuthenticatedRole"; public static String AuthenticatedRole = "AuthenticatedRole";
public static String PublicRole = "PublicRole";
public static String DatasetProfileManagerRole = "DatasetProfileManagerRole";
///// /////
public static String DeferredAffiliation = "DeferredAffiliation";
//Public //Public
public static String PublicBrowseDescription = "PublicBrowseDescription"; public static String PublicBrowseDescription = "PublicBrowseDescription";
public static String PublicBrowseDescriptionTemplate = "BrowseDescriptionTemplate"; public static String PublicBrowseDescriptionTemplate = "PublicBrowseDescriptionTemplate";
public static String PublicBrowseDmp = "PublicBrowseDmp"; public static String PublicBrowseDmp = "PublicBrowseDmp";
public static String PublicBrowseDmpReference = "PublicBrowseDmpReference"; public static String PublicBrowseDmpReference = "PublicBrowseDmpReference";
public static String PublicBrowseDmpUser = "PublicBrowseDmpUser"; public static String PublicBrowseDmpUser = "PublicBrowseDmpUser";
@ -73,6 +69,8 @@ public final class Permission {
//Dmp //Dmp
public static String BrowseDmp = "BrowseDmp"; public static String BrowseDmp = "BrowseDmp";
public static String EditDmp = "EditDmp"; public static String EditDmp = "EditDmp";
public static String NewDmp = "NewDmp";
public static String DeleteDmp = "DeleteDmp"; public static String DeleteDmp = "DeleteDmp";
public static String CloneDmp = "CloneDmp"; public static String CloneDmp = "CloneDmp";
public static String CreateNewVersionDmp = "CreateNewVersionDmp"; public static String CreateNewVersionDmp = "CreateNewVersionDmp";

View File

@ -9,7 +9,8 @@ public enum StorageType implements DatabaseEnum<Short> {
Temp((short) 0), Temp((short) 0),
Main((short) 1), Main((short) 1),
Transformer((short)2); Transformer((short)2),
Deposit((short)3);
private final Short value; private final Short value;

View File

@ -26,6 +26,8 @@ public class DepositProperties {
private String clientId; private String clientId;
private String clientSecret; private String clientSecret;
private String scope; private String scope;
private String pdfTransformerId;
private String rdaTransformerId;
public String getRepositoryId() { public String getRepositoryId() {
return repositoryId; return repositoryId;
@ -74,5 +76,21 @@ public class DepositProperties {
public void setScope(String scope) { public void setScope(String scope) {
this.scope = scope; this.scope = scope;
} }
public String getPdfTransformerId() {
return pdfTransformerId;
}
public void setPdfTransformerId(String pdfTransformerId) {
this.pdfTransformerId = pdfTransformerId;
}
public String getRdaTransformerId() {
return rdaTransformerId;
}
public void setRdaTransformerId(String rdaTransformerId) {
this.rdaTransformerId = rdaTransformerId;
}
} }
} }

View File

@ -22,6 +22,7 @@ public class TransformerProperties {
public static class TransformerSource { public static class TransformerSource {
private final String url; private final String url;
private final String transformerId;
private final List<String> codes; private final List<String> codes;
private final String issuerUrl; private final String issuerUrl;
private final String clientId; private final String clientId;
@ -29,8 +30,9 @@ public class TransformerProperties {
private final String scope; private final String scope;
@ConstructorBinding @ConstructorBinding
public TransformerSource(String url, List<String> codes, String issuerUrl, String clientId, String clientSecret, String scope) { public TransformerSource(String url, String transformerId, List<String> codes, String issuerUrl, String clientId, String clientSecret, String scope) {
this.url = url; this.url = url;
this.transformerId = transformerId;
this.codes = codes; this.codes = codes;
this.issuerUrl = issuerUrl; this.issuerUrl = issuerUrl;
this.clientId = clientId; this.clientId = clientId;
@ -61,5 +63,9 @@ public class TransformerProperties {
public List<String> getCodes() { public List<String> getCodes() {
return codes; return codes;
} }
public String getTransformerId() {
return transformerId;
}
} }
} }

View File

@ -98,7 +98,7 @@ public class ReferenceEntity extends TenantScopedBaseEntity {
@Column(name = "created_by", columnDefinition = "uuid") @Column(name = "created_by", columnDefinition = "uuid")
private UUID createdById; private UUID createdById;
public static final String _createdById = "createdBy"; public static final String _createdById = "createdById";
public UUID getId() { public UUID getId() {
return id; return id;

View File

@ -27,6 +27,8 @@ public class OutboxIntegrationEvent extends IntegrationEvent {
public static final String DESCRIPTION_TOUCH = "DESCRIPTION_TOUCH"; public static final String DESCRIPTION_TOUCH = "DESCRIPTION_TOUCH";
public static final String ANNOTATION_ENTITY_TOUCH = "ANNOTATION_ENTITY_TOUCH";
public static final String WHAT_YOU_KNOW_ABOUT_ME_COMPLETED = "WHAT_YOU_KNOW_ABOUT_ME_COMPLETED"; public static final String WHAT_YOU_KNOW_ABOUT_ME_COMPLETED = "WHAT_YOU_KNOW_ABOUT_ME_COMPLETED";
public static final String GENERATE_FILE = "GENERATE_FILE"; public static final String GENERATE_FILE = "GENERATE_FILE";

View File

@ -23,6 +23,8 @@ public class OutboxProperties {
private final String descriptionTouchTopic; private final String descriptionTouchTopic;
private final String annotationEntityTouchTopic;
private final String notifyTopic; private final String notifyTopic;
private final String forgetMeCompletedTopic; private final String forgetMeCompletedTopic;
@ -37,7 +39,10 @@ public class OutboxProperties {
String tenantReactivationTopic, String tenantReactivationTopic,
String tenantUserInviteTopic, String tenantUserInviteTopic,
String userRemovalTopic, String userRemovalTopic,
String userTouchTopic, String dmpTouchTopic, String descriptionTouchTopic, String userTouchTopic,
String dmpTouchTopic,
String descriptionTouchTopic,
String annotationEntityTouchTopic,
String notifyTopic, String notifyTopic,
String forgetMeCompletedTopic, String forgetMeCompletedTopic,
String whatYouKnowAboutMeCompletedTopic, String whatYouKnowAboutMeCompletedTopic,
@ -52,6 +57,7 @@ public class OutboxProperties {
this.userTouchTopic = userTouchTopic; this.userTouchTopic = userTouchTopic;
this.dmpTouchTopic = dmpTouchTopic; this.dmpTouchTopic = dmpTouchTopic;
this.descriptionTouchTopic = descriptionTouchTopic; this.descriptionTouchTopic = descriptionTouchTopic;
this.annotationEntityTouchTopic = annotationEntityTouchTopic;
this.notifyTopic = notifyTopic; this.notifyTopic = notifyTopic;
this.forgetMeCompletedTopic = forgetMeCompletedTopic; this.forgetMeCompletedTopic = forgetMeCompletedTopic;
this.whatYouKnowAboutMeCompletedTopic = whatYouKnowAboutMeCompletedTopic; this.whatYouKnowAboutMeCompletedTopic = whatYouKnowAboutMeCompletedTopic;
@ -94,6 +100,10 @@ public class OutboxProperties {
return descriptionTouchTopic; return descriptionTouchTopic;
} }
public String getAnnotationEntityTouchTopic() {
return annotationEntityTouchTopic;
}
public String getNotifyTopic() { public String getNotifyTopic() {
return notifyTopic; return notifyTopic;
} }

View File

@ -415,6 +415,10 @@ public class OutboxRepositoryImpl implements OutboxRepository {
routingKey = this.outboxProperties.getDescriptionTouchTopic(); routingKey = this.outboxProperties.getDescriptionTouchTopic();
break; break;
} }
case OutboxIntegrationEvent.ANNOTATION_ENTITY_TOUCH: {
routingKey = this.outboxProperties.getAnnotationEntityTouchTopic();
break;
}
case OutboxIntegrationEvent.FORGET_ME_COMPLETED: { case OutboxIntegrationEvent.FORGET_ME_COMPLETED: {
routingKey = this.outboxProperties.getForgetMeCompletedTopic(); routingKey = this.outboxProperties.getForgetMeCompletedTopic();
break; break;

View File

@ -0,0 +1,30 @@
package eu.eudat.integrationevent.outbox.annotationentitytouch;
import eu.eudat.integrationevent.TrackedEvent;
import java.util.List;
import java.util.UUID;
public class AnnotationEntityTouchedIntegrationEvent extends TrackedEvent {
private UUID entityId;
private List<UUID> userIds;
public UUID getEntityId() {
return entityId;
}
public void setEntityId(UUID entityId) {
this.entityId = entityId;
}
public List<UUID> getUserIds() {
return userIds;
}
public void setUserIds(List<UUID> userIds) {
this.userIds = userIds;
}
}

View File

@ -0,0 +1,25 @@
package eu.eudat.integrationevent.outbox.annotationentitytouch;
import eu.eudat.integrationevent.outbox.dmptouched.DmpTouchedIntegrationEvent;
import eu.eudat.model.persist.DmpPersist;
import java.util.ArrayList;
import java.util.List;
import java.util.UUID;
public interface AnnotationEntityTouchedIntegrationEventHandler {
void handle(AnnotationEntityTouchedIntegrationEvent event);
static AnnotationEntityTouchedIntegrationEvent buildEventFromPersistModel(DmpPersist persist) {
AnnotationEntityTouchedIntegrationEvent event = new AnnotationEntityTouchedIntegrationEvent();
event.setEntityId(persist.getId());
List<UUID> users = new ArrayList<>();
persist.getUsers().forEach(dmpUserPersist -> {
users.add(dmpUserPersist.getUser());
});
event.setUserIds(users);
return event;
}
}

View File

@ -0,0 +1,34 @@
package eu.eudat.integrationevent.outbox.annotationentitytouch;
import eu.eudat.integrationevent.outbox.OutboxIntegrationEvent;
import eu.eudat.integrationevent.outbox.OutboxService;
import gr.cite.tools.logging.LoggerService;
import org.slf4j.LoggerFactory;
import org.springframework.beans.factory.config.ConfigurableBeanFactory;
import org.springframework.context.annotation.Scope;
import org.springframework.stereotype.Component;
import java.util.UUID;
@Component
@Scope(value = ConfigurableBeanFactory.SCOPE_PROTOTYPE)
public class AnnotationEntityTouchedIntegrationEventHandlerImpl implements AnnotationEntityTouchedIntegrationEventHandler {
private static final LoggerService logger = new LoggerService(LoggerFactory.getLogger(AnnotationEntityTouchedIntegrationEventHandlerImpl.class));
private final OutboxService outboxService;
public AnnotationEntityTouchedIntegrationEventHandlerImpl(OutboxService outboxService) {
this.outboxService = outboxService;
}
@Override
public void handle(AnnotationEntityTouchedIntegrationEvent event) {
OutboxIntegrationEvent message = new OutboxIntegrationEvent();
message.setMessageId(UUID.randomUUID());
message.setType(OutboxIntegrationEvent.ANNOTATION_ENTITY_TOUCH);
message.setEvent(event);
this.outboxService.publish(message);
}
}

View File

@ -37,7 +37,16 @@ public class PublicDmp {
public static final String _publishedAt = "publishedAt"; public static final String _publishedAt = "publishedAt";
private List<PublicDmpUser> users; private DmpStatus status;
public static final String _status = "status";
private UUID groupId;
public static final String _groupId = "groupId";
private DmpAccessType accessType;
public static final String _accessType = "accessType";
private List<PublicDmpUser> dmpUsers;
public static final String _dmpUsers = "dmpUsers"; public static final String _dmpUsers = "dmpUsers";
@ -104,12 +113,36 @@ public class PublicDmp {
this.publishedAt = publishedAt; this.publishedAt = publishedAt;
} }
public List<PublicDmpUser> getUsers() { public DmpStatus getStatus() {
return users; return status;
} }
public void setUsers(List<PublicDmpUser> users) { public void setStatus(DmpStatus status) {
this.users = users; this.status = status;
}
public UUID getGroupId() {
return groupId;
}
public void setGroupId(UUID groupId) {
this.groupId = groupId;
}
public DmpAccessType getAccessType() {
return accessType;
}
public void setAccessType(DmpAccessType accessType) {
this.accessType = accessType;
}
public List<PublicDmpUser> getDmpUsers() {
return dmpUsers;
}
public void setDmpUsers(List<PublicDmpUser> dmpUsers) {
this.dmpUsers = dmpUsers;
} }
public List<PublicDmpReference> getDmpReferences() { public List<PublicDmpReference> getDmpReferences() {

View File

@ -1,5 +1,7 @@
package eu.eudat.model; package eu.eudat.model;
import eu.eudat.commons.enums.IsActive;
import java.time.Instant; import java.time.Instant;
import java.util.UUID; import java.util.UUID;
@ -14,6 +16,9 @@ public class PublicDmpReference {
private PublicReference reference; private PublicReference reference;
public static final String _reference = "reference"; public static final String _reference = "reference";
private IsActive isActive;
public static final String _isActive = "isActive";
public UUID getId() { public UUID getId() {
return id; return id;
} }
@ -37,4 +42,12 @@ public class PublicDmpReference {
public void setReference(PublicReference reference) { public void setReference(PublicReference reference) {
this.reference = reference; this.reference = reference;
} }
public IsActive getIsActive() {
return isActive;
}
public void setIsActive(IsActive isActive) {
this.isActive = isActive;
}
} }

View File

@ -74,9 +74,13 @@ public class PublicDmpBuilder extends BaseBuilder<PublicDmp, DmpEntity> {
if (fields.hasField(this.asIndexer(PublicDmp._description))) m.setDescription(d.getDescription()); if (fields.hasField(this.asIndexer(PublicDmp._description))) m.setDescription(d.getDescription());
if (fields.hasField(this.asIndexer(PublicDmp._finalizedAt))) m.setFinalizedAt(d.getFinalizedAt()); if (fields.hasField(this.asIndexer(PublicDmp._finalizedAt))) m.setFinalizedAt(d.getFinalizedAt());
if (fields.hasField(this.asIndexer(PublicDmp._updatedAt))) m.setUpdatedAt(d.getUpdatedAt()); if (fields.hasField(this.asIndexer(PublicDmp._updatedAt))) m.setUpdatedAt(d.getUpdatedAt());
if (fields.hasField(this.asIndexer(PublicDmp._accessType))) m.setAccessType(d.getAccessType());
if (fields.hasField(this.asIndexer(PublicDmp._status))) m.setStatus(d.getStatus());
if (fields.hasField(this.asIndexer(PublicDmp._groupId))) m.setGroupId(d.getGroupId());
if (fields.hasField(this.asIndexer(PublicDmp._accessType))) m.setAccessType(d.getAccessType());
if (dmpReferenceMap != null && !dmpReferenceMap.isEmpty() && dmpReferenceMap.containsKey(d.getId())) m.setDmpReferences(dmpReferenceMap.get(d.getId())); if (dmpReferenceMap != null && !dmpReferenceMap.isEmpty() && dmpReferenceMap.containsKey(d.getId())) m.setDmpReferences(dmpReferenceMap.get(d.getId()));
if (dmpUsersMap != null && !dmpUsersMap.isEmpty() && dmpUsersMap.containsKey(d.getId())) m.setUsers(dmpUsersMap.get(d.getId())); if (dmpUsersMap != null && !dmpUsersMap.isEmpty() && dmpUsersMap.containsKey(d.getId())) m.setDmpUsers(dmpUsersMap.get(d.getId()));
if (descriptionsMap != null && !descriptionsMap.isEmpty() && descriptionsMap.containsKey(d.getId())) m.setDescriptions(descriptionsMap.get(d.getId())); if (descriptionsMap != null && !descriptionsMap.isEmpty() && descriptionsMap.containsKey(d.getId())) m.setDescriptions(descriptionsMap.get(d.getId()));
models.add(m); models.add(m);
@ -109,7 +113,7 @@ public class PublicDmpBuilder extends BaseBuilder<PublicDmp, DmpEntity> {
this.logger.debug("checking related - {}", PublicDmpUser.class.getSimpleName()); this.logger.debug("checking related - {}", PublicDmpUser.class.getSimpleName());
Map<UUID, List<PublicDmpUser>> itemMap = null; Map<UUID, List<PublicDmpUser>> itemMap = null;
FieldSet clone = new BaseFieldSet(fields.getFields()).ensure(this.asIndexer(PublicDmpUser._user, PublicDmp._id)); FieldSet clone = new BaseFieldSet(fields.getFields()).ensure(this.asIndexer(PublicDmpUser._dmp, PublicDmp._id));
DmpUserQuery query = this.queryFactory.query(DmpUserQuery.class).authorize(this.authorize).dmpIds(data.stream().map(DmpEntity::getId).distinct().collect(Collectors.toList())); DmpUserQuery query = this.queryFactory.query(DmpUserQuery.class).authorize(this.authorize).dmpIds(data.stream().map(DmpEntity::getId).distinct().collect(Collectors.toList()));
itemMap = this.builderFactory.builder(PublicDmpUserBuilder.class).authorize(this.authorize).asMasterKey(query, clone, x -> x.getDmp().getId()); itemMap = this.builderFactory.builder(PublicDmpUserBuilder.class).authorize(this.authorize).asMasterKey(query, clone, x -> x.getDmp().getId());

View File

@ -66,6 +66,7 @@ public class PublicDmpReferenceBuilder extends BaseBuilder<PublicDmpReference, D
for (DmpReferenceEntity d : data) { for (DmpReferenceEntity d : data) {
PublicDmpReference m = new PublicDmpReference(); PublicDmpReference m = new PublicDmpReference();
if (fields.hasField(this.asIndexer(PublicDmpReference._id))) m.setId(d.getId()); if (fields.hasField(this.asIndexer(PublicDmpReference._id))) m.setId(d.getId());
if (fields.hasField(this.asIndexer(PublicDmpReference._isActive))) m.setIsActive(d.getIsActive());
if (!referenceFields.isEmpty() && referenceItemsMap != null && referenceItemsMap.containsKey(d.getReferenceId())) m.setReference(referenceItemsMap.get(d.getReferenceId())); if (!referenceFields.isEmpty() && referenceItemsMap != null && referenceItemsMap.containsKey(d.getReferenceId())) m.setReference(referenceItemsMap.get(d.getReferenceId()));
if (!dmpFields.isEmpty() && dmpItemsMap != null && dmpItemsMap.containsKey(d.getDmpId())) m.setDmp(dmpItemsMap.get(d.getDmpId())); if (!dmpFields.isEmpty() && dmpItemsMap != null && dmpItemsMap.containsKey(d.getDmpId())) m.setDmp(dmpItemsMap.get(d.getDmpId()));
models.add(m); models.add(m);

View File

@ -64,6 +64,13 @@ public class DescriptionCommonModelBuilder extends BaseCommonModelBuilder<Descri
return this; return this;
} }
private boolean useSharedStorage;
public DescriptionCommonModelBuilder useSharedStorage(boolean useSharedStorage) {
this.useSharedStorage = useSharedStorage;
return this;
}
@Override @Override
protected List<CommonModelBuilderItemResponse<DescriptionModel, DescriptionEntity>> buildInternal(List<DescriptionEntity> data) throws MyApplicationException { protected List<CommonModelBuilderItemResponse<DescriptionModel, DescriptionEntity>> buildInternal(List<DescriptionEntity> data) throws MyApplicationException {
this.logger.debug("building for {}", Optional.ofNullable(data).map(List::size).orElse(0)); this.logger.debug("building for {}", Optional.ofNullable(data).map(List::size).orElse(0));
@ -95,7 +102,7 @@ public class DescriptionCommonModelBuilder extends BaseCommonModelBuilder<Descri
if (d.getProperties() != null){ if (d.getProperties() != null){
//TODO Update with the new logic of property definition //TODO Update with the new logic of property definition
PropertyDefinitionEntity propertyDefinition = this.jsonHandlingService.fromJsonSafe(PropertyDefinitionEntity.class, d.getProperties()); PropertyDefinitionEntity propertyDefinition = this.jsonHandlingService.fromJsonSafe(PropertyDefinitionEntity.class, d.getProperties());
m.setProperties(this.builderFactory.builder(PropertyDefinitionCommonModelBuilder.class).withDefinition(definitionEntityMap != null ? definitionEntityMap.getOrDefault(d.getDescriptionTemplateId(), null) : null).authorize(this.authorize).build(propertyDefinition)); m.setProperties(this.builderFactory.builder(PropertyDefinitionCommonModelBuilder.class).useSharedStorage(useSharedStorage).withDefinition(definitionEntityMap != null ? definitionEntityMap.getOrDefault(d.getDescriptionTemplateId(), null) : null).authorize(this.authorize).build(propertyDefinition));
} }
models.add(new CommonModelBuilderItemResponse<>(m, d)); models.add(new CommonModelBuilderItemResponse<>(m, d));
} }
@ -143,7 +150,7 @@ public class DescriptionCommonModelBuilder extends BaseCommonModelBuilder<Descri
Map<UUID, DmpModel> itemMap; Map<UUID, DmpModel> itemMap;
DmpQuery q = this.queryFactory.query(DmpQuery.class).authorize(this.authorize).ids(data.stream().map(DescriptionEntity::getDmpId).distinct().collect(Collectors.toList())); DmpQuery q = this.queryFactory.query(DmpQuery.class).authorize(this.authorize).ids(data.stream().map(DescriptionEntity::getDmpId).distinct().collect(Collectors.toList()));
itemMap = this.builderFactory.builder(DmpCommonModelBuilder.class).setDisableDescriptions(true).authorize(this.authorize).asForeignKey(q, DmpEntity::getId); itemMap = this.builderFactory.builder(DmpCommonModelBuilder.class).useSharedStorage(useSharedStorage).setDisableDescriptions(true).authorize(this.authorize).asForeignKey(q, DmpEntity::getId);
return itemMap; return itemMap;
} }

View File

@ -1,27 +1,42 @@
package eu.eudat.model.builder.commonmodels.description; package eu.eudat.model.builder.commonmodels.description;
import eu.eudat.authorization.AuthorizationFlags; import eu.eudat.authorization.AuthorizationFlags;
import eu.eudat.commonmodels.models.FileEnvelopeModel;
import eu.eudat.commonmodels.models.description.FieldModel; import eu.eudat.commonmodels.models.description.FieldModel;
import eu.eudat.commonmodels.models.reference.ReferenceModel; import eu.eudat.commonmodels.models.reference.ReferenceModel;
import eu.eudat.commons.enums.FieldType; import eu.eudat.commons.enums.FieldType;
import eu.eudat.commons.enums.StorageType;
import eu.eudat.commons.scope.user.UserScope;
import eu.eudat.commons.types.description.FieldEntity; import eu.eudat.commons.types.description.FieldEntity;
import eu.eudat.convention.ConventionService; import eu.eudat.convention.ConventionService;
import eu.eudat.data.ReferenceEntity; import eu.eudat.data.ReferenceEntity;
import eu.eudat.data.StorageFileEntity;
import eu.eudat.model.Reference; import eu.eudat.model.Reference;
import eu.eudat.model.StorageFile;
import eu.eudat.model.builder.commonmodels.BaseCommonModelBuilder; import eu.eudat.model.builder.commonmodels.BaseCommonModelBuilder;
import eu.eudat.model.builder.commonmodels.CommonModelBuilderItemResponse; import eu.eudat.model.builder.commonmodels.CommonModelBuilderItemResponse;
import eu.eudat.model.builder.commonmodels.reference.ReferenceCommonModelBuilder; import eu.eudat.model.builder.commonmodels.reference.ReferenceCommonModelBuilder;
import eu.eudat.model.persist.StorageFilePersist;
import eu.eudat.query.ReferenceQuery; import eu.eudat.query.ReferenceQuery;
import eu.eudat.query.StorageFileQuery;
import eu.eudat.service.storage.StorageFileProperties;
import eu.eudat.service.storage.StorageFileService;
import gr.cite.tools.data.builder.BuilderFactory; import gr.cite.tools.data.builder.BuilderFactory;
import gr.cite.tools.data.query.QueryFactory; import gr.cite.tools.data.query.QueryFactory;
import gr.cite.tools.exception.MyApplicationException; import gr.cite.tools.exception.MyApplicationException;
import gr.cite.tools.fieldset.BaseFieldSet;
import gr.cite.tools.logging.LoggerService; import gr.cite.tools.logging.LoggerService;
import gr.cite.tools.validation.ValidatorFactory;
import org.apache.commons.io.FilenameUtils;
import org.slf4j.LoggerFactory; import org.slf4j.LoggerFactory;
import org.springframework.beans.factory.annotation.Autowired; import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.beans.factory.config.ConfigurableBeanFactory; import org.springframework.beans.factory.config.ConfigurableBeanFactory;
import org.springframework.context.annotation.Scope; import org.springframework.context.annotation.Scope;
import org.springframework.stereotype.Component; import org.springframework.stereotype.Component;
import java.io.IOException;
import java.net.URLConnection;
import java.time.Duration;
import java.util.*; import java.util.*;
import java.util.stream.Collectors; import java.util.stream.Collectors;
@ -32,24 +47,38 @@ public class FieldCommonModelBuilder extends BaseCommonModelBuilder<FieldModel,
private final QueryFactory queryFactory; private final QueryFactory queryFactory;
private EnumSet<AuthorizationFlags> authorize = EnumSet.of(AuthorizationFlags.None); private EnumSet<AuthorizationFlags> authorize = EnumSet.of(AuthorizationFlags.None);
private eu.eudat.commons.types.descriptiontemplate.FieldEntity fieldEntity; private eu.eudat.commons.types.descriptiontemplate.FieldEntity fieldEntity;
private final StorageFileService storageFileService;
private final UserScope userScope;
private final ValidatorFactory validatorFactory;
private final StorageFileProperties storageFileProperties;
@Autowired @Autowired
public FieldCommonModelBuilder( public FieldCommonModelBuilder(
ConventionService conventionService, BuilderFactory builderFactory, QueryFactory queryFactory ConventionService conventionService, BuilderFactory builderFactory, QueryFactory queryFactory, StorageFileService storageFileService, UserScope userScope, ValidatorFactory validatorFactory, StorageFileProperties storageFileProperties
) { ) {
super(conventionService, new LoggerService(LoggerFactory.getLogger(FieldCommonModelBuilder.class))); super(conventionService, new LoggerService(LoggerFactory.getLogger(FieldCommonModelBuilder.class)));
this.builderFactory = builderFactory; this.builderFactory = builderFactory;
this.queryFactory = queryFactory; this.queryFactory = queryFactory;
this.storageFileService = storageFileService;
this.userScope = userScope;
this.validatorFactory = validatorFactory;
this.storageFileProperties = storageFileProperties;
} }
public FieldCommonModelBuilder authorize(EnumSet<AuthorizationFlags> values) { public FieldCommonModelBuilder authorize(EnumSet<AuthorizationFlags> values) {
this.authorize = values; this.authorize = values;
return this; return this;
} }
public FieldCommonModelBuilder withFieldEntity(eu.eudat.commons.types.descriptiontemplate.FieldEntity fieldEntity) { public FieldCommonModelBuilder withFieldEntity(eu.eudat.commons.types.descriptiontemplate.FieldEntity fieldEntity) {
this.fieldEntity = fieldEntity; this.fieldEntity = fieldEntity;
return this; return this;
} }
private boolean useSharedStorage;
public FieldCommonModelBuilder useSharedStorage(boolean useSharedStorage) {
this.useSharedStorage = useSharedStorage;
return this;
}
@Override @Override
protected List<CommonModelBuilderItemResponse<FieldModel, FieldEntity>> buildInternal(List<FieldEntity> data) throws MyApplicationException { protected List<CommonModelBuilderItemResponse<FieldModel, FieldEntity>> buildInternal(List<FieldEntity> data) throws MyApplicationException {
this.logger.debug("building for {}", Optional.ofNullable(data).map(List::size).orElse(0)); this.logger.debug("building for {}", Optional.ofNullable(data).map(List::size).orElse(0));
@ -72,6 +101,24 @@ public class FieldCommonModelBuilder extends BaseCommonModelBuilder<FieldModel,
if (referenceItemsMap.containsKey(referenceId)) m.getReferences().add(referenceItemsMap.get(referenceId)); if (referenceItemsMap.containsKey(referenceId)) m.getReferences().add(referenceItemsMap.get(referenceId));
} }
} }
if (FieldType.UPLOAD.equals(fieldType) && d.getTextValue() != null && !d.getTextValue().isEmpty()) {
try {
byte[] bytes = this.storageFileService.readAsBytesSafe(UUID.fromString(d.getTextValue()));
FileEnvelopeModel fileEnvelopeModel = new FileEnvelopeModel();
StorageFileEntity storageFile = this.queryFactory.query(StorageFileQuery.class).ids(UUID.fromString(d.getTextValue())).first();
fileEnvelopeModel.setFile(bytes);
fileEnvelopeModel.setFilename(storageFile.getName() + (storageFile.getExtension().startsWith(".") ? "" : ".") + storageFile.getExtension());
fileEnvelopeModel.setMimeType(storageFile.getMimeType());
if (!useSharedStorage){
fileEnvelopeModel.setFile(bytes);
} else {
fileEnvelopeModel.setFileRef(this.addFileToSharedStorage(bytes, storageFile));
}
}catch (Exception e){
logger.error(e.getMessage());
}
}
if (d.getExternalIdentifier() != null && FieldType.isExternalIdentifierType(fieldType)) m.setExternalIdentifier(this.builderFactory.builder(ExternalIdentifierCommonModelBuilder.class).authorize(this.authorize).build(d.getExternalIdentifier())); if (d.getExternalIdentifier() != null && FieldType.isExternalIdentifierType(fieldType)) m.setExternalIdentifier(this.builderFactory.builder(ExternalIdentifierCommonModelBuilder.class).authorize(this.authorize).build(d.getExternalIdentifier()));
models.add(new CommonModelBuilderItemResponse<>(m, d)); models.add(new CommonModelBuilderItemResponse<>(m, d));
@ -82,6 +129,19 @@ public class FieldCommonModelBuilder extends BaseCommonModelBuilder<FieldModel,
return models; return models;
} }
private String addFileToSharedStorage(byte[] bytes, StorageFileEntity storageFile) throws IOException {
StorageFilePersist storageFilePersist = new StorageFilePersist();
storageFilePersist.setName(FilenameUtils.removeExtension(storageFile.getName()));
storageFilePersist.setExtension(FilenameUtils.getExtension(storageFile.getExtension()));
storageFilePersist.setMimeType(URLConnection.guessContentTypeFromName(storageFile.getName() + (storageFile.getExtension().startsWith(".") ? "" : ".") + storageFile.getExtension()));
storageFilePersist.setOwnerId(this.userScope.getUserIdSafe());
storageFilePersist.setStorageType(StorageType.Temp);
storageFilePersist.setLifetime(Duration.ofSeconds(this.storageFileProperties.getTempStoreLifetimeSeconds())); //TODO
this.validatorFactory.validator(StorageFilePersist.StorageFilePersistValidator.class).validateForce(storageFilePersist);
StorageFile persisted = this.storageFileService.persistBytes(storageFilePersist, bytes, new BaseFieldSet(StorageFile._id, StorageFile._fileRef));
return persisted.getFileRef();
}
private Map<UUID, ReferenceModel> collectReferences(List<FieldEntity> data) throws MyApplicationException { private Map<UUID, ReferenceModel> collectReferences(List<FieldEntity> data) throws MyApplicationException {
if (data.isEmpty()) if (data.isEmpty())
return null; return null;

View File

@ -42,6 +42,13 @@ public class PropertyDefinitionCommonModelBuilder extends BaseCommonModelBuilder
this.definition = definition; this.definition = definition;
return this; return this;
} }
private boolean useSharedStorage;
public PropertyDefinitionCommonModelBuilder useSharedStorage(boolean useSharedStorage) {
this.useSharedStorage = useSharedStorage;
return this;
}
@Override @Override
protected List<CommonModelBuilderItemResponse<PropertyDefinitionModel, PropertyDefinitionEntity>> buildInternal(List<PropertyDefinitionEntity> data) throws MyApplicationException { protected List<CommonModelBuilderItemResponse<PropertyDefinitionModel, PropertyDefinitionEntity>> buildInternal(List<PropertyDefinitionEntity> data) throws MyApplicationException {
this.logger.debug("building for {}", Optional.ofNullable(data).map(List::size).orElse(0)); this.logger.debug("building for {}", Optional.ofNullable(data).map(List::size).orElse(0));
@ -53,7 +60,7 @@ public class PropertyDefinitionCommonModelBuilder extends BaseCommonModelBuilder
m.setFieldSets(new HashMap<>()); m.setFieldSets(new HashMap<>());
for (String key : d.getFieldSets().keySet()){ for (String key : d.getFieldSets().keySet()){
FieldSetEntity fieldSetEntity = definition != null ? definition.getFieldSetById(key).stream().findFirst().orElse(null) : null; FieldSetEntity fieldSetEntity = definition != null ? definition.getFieldSetById(key).stream().findFirst().orElse(null) : null;
m.getFieldSets().put(key, this.builderFactory.builder(PropertyDefinitionFieldSetCommonModelBuilder.class).authorize(this.authorize).withFieldSetEntity(fieldSetEntity).build(d.getFieldSets().get(key))); m.getFieldSets().put(key, this.builderFactory.builder(PropertyDefinitionFieldSetCommonModelBuilder.class).useSharedStorage(useSharedStorage).authorize(this.authorize).withFieldSetEntity(fieldSetEntity).build(d.getFieldSets().get(key)));
} }
models.add(new CommonModelBuilderItemResponse<>(m, d)); models.add(new CommonModelBuilderItemResponse<>(m, d));
} }

View File

@ -42,6 +42,13 @@ public class PropertyDefinitionFieldSetCommonModelBuilder extends BaseCommonMode
this.fieldSetEntity = fieldSetEntity; this.fieldSetEntity = fieldSetEntity;
return this; return this;
} }
private boolean useSharedStorage;
public PropertyDefinitionFieldSetCommonModelBuilder useSharedStorage(boolean useSharedStorage) {
this.useSharedStorage = useSharedStorage;
return this;
}
@Override @Override
protected List<CommonModelBuilderItemResponse<PropertyDefinitionFieldSetModel, PropertyDefinitionFieldSetEntity>> buildInternal(List<PropertyDefinitionFieldSetEntity> data) throws MyApplicationException { protected List<CommonModelBuilderItemResponse<PropertyDefinitionFieldSetModel, PropertyDefinitionFieldSetEntity>> buildInternal(List<PropertyDefinitionFieldSetEntity> data) throws MyApplicationException {
this.logger.debug("building for {}", Optional.ofNullable(data).map(List::size).orElse(0)); this.logger.debug("building for {}", Optional.ofNullable(data).map(List::size).orElse(0));
@ -50,7 +57,7 @@ public class PropertyDefinitionFieldSetCommonModelBuilder extends BaseCommonMode
List<CommonModelBuilderItemResponse<PropertyDefinitionFieldSetModel, PropertyDefinitionFieldSetEntity>> models = new ArrayList<>(); List<CommonModelBuilderItemResponse<PropertyDefinitionFieldSetModel, PropertyDefinitionFieldSetEntity>> models = new ArrayList<>();
for (PropertyDefinitionFieldSetEntity d : data) { for (PropertyDefinitionFieldSetEntity d : data) {
PropertyDefinitionFieldSetModel m = new PropertyDefinitionFieldSetModel(); PropertyDefinitionFieldSetModel m = new PropertyDefinitionFieldSetModel();
if (d.getItems() != null) m.setItems(this.builderFactory.builder(PropertyDefinitionFieldSetItemModelCommonModelBuilder.class).withFieldSetEntity(this.fieldSetEntity).authorize(this.authorize).build(d.getItems())); if (d.getItems() != null) m.setItems(this.builderFactory.builder(PropertyDefinitionFieldSetItemModelCommonModelBuilder.class).useSharedStorage(useSharedStorage).withFieldSetEntity(this.fieldSetEntity).authorize(this.authorize).build(d.getItems()));
models.add(new CommonModelBuilderItemResponse<>(m, d)); models.add(new CommonModelBuilderItemResponse<>(m, d));
} }

View File

@ -45,6 +45,13 @@ public class PropertyDefinitionFieldSetItemModelCommonModelBuilder extends BaseC
} }
private boolean useSharedStorage;
public PropertyDefinitionFieldSetItemModelCommonModelBuilder useSharedStorage(boolean useSharedStorage) {
this.useSharedStorage = useSharedStorage;
return this;
}
@Override @Override
protected List<CommonModelBuilderItemResponse<PropertyDefinitionFieldSetItemModel, PropertyDefinitionFieldSetItemEntity>> buildInternal(List<PropertyDefinitionFieldSetItemEntity> data) throws MyApplicationException { protected List<CommonModelBuilderItemResponse<PropertyDefinitionFieldSetItemModel, PropertyDefinitionFieldSetItemEntity>> buildInternal(List<PropertyDefinitionFieldSetItemEntity> data) throws MyApplicationException {
this.logger.debug("building for {}", Optional.ofNullable(data).map(List::size).orElse(0)); this.logger.debug("building for {}", Optional.ofNullable(data).map(List::size).orElse(0));
@ -60,7 +67,7 @@ public class PropertyDefinitionFieldSetItemModelCommonModelBuilder extends BaseC
m.setFields(new HashMap<>()); m.setFields(new HashMap<>());
for (String key : d.getFields().keySet()){ for (String key : d.getFields().keySet()){
FieldEntity fieldEntity = fieldSetEntity != null ? fieldSetEntity.getAllField().stream().findFirst().orElse(null) : null; FieldEntity fieldEntity = fieldSetEntity != null ? fieldSetEntity.getAllField().stream().findFirst().orElse(null) : null;
m.getFields().put(key, this.builderFactory.builder(FieldCommonModelBuilder.class).authorize(this.authorize).withFieldEntity(fieldEntity).build(d.getFields().get(key))); m.getFields().put(key, this.builderFactory.builder(FieldCommonModelBuilder.class).useSharedStorage(useSharedStorage).authorize(this.authorize).withFieldEntity(fieldEntity).build(d.getFields().get(key)));
} }
} }
models.add(new CommonModelBuilderItemResponse<>(m, d)); models.add(new CommonModelBuilderItemResponse<>(m, d));

View File

@ -11,7 +11,6 @@ import eu.eudat.commonmodels.models.description.DescriptionModel;
import eu.eudat.commonmodels.models.dmp.DmpModel; import eu.eudat.commonmodels.models.dmp.DmpModel;
import eu.eudat.commonmodels.models.dmpblueprint.DmpBlueprintModel; import eu.eudat.commonmodels.models.dmpblueprint.DmpBlueprintModel;
import eu.eudat.commonmodels.models.dmpreference.DmpReferenceModel; import eu.eudat.commonmodels.models.dmpreference.DmpReferenceModel;
import eu.eudat.commonmodels.models.reference.ReferenceModel;
import eu.eudat.commons.JsonHandlingService; import eu.eudat.commons.JsonHandlingService;
import eu.eudat.commons.enums.IsActive; import eu.eudat.commons.enums.IsActive;
import eu.eudat.commons.types.dmp.DmpPropertiesEntity; import eu.eudat.commons.types.dmp.DmpPropertiesEntity;
@ -22,7 +21,6 @@ import eu.eudat.model.builder.commonmodels.*;
import eu.eudat.model.builder.commonmodels.description.DescriptionCommonModelBuilder; import eu.eudat.model.builder.commonmodels.description.DescriptionCommonModelBuilder;
import eu.eudat.model.builder.commonmodels.dmpblueprint.DmpBlueprintCommonModelBuilder; import eu.eudat.model.builder.commonmodels.dmpblueprint.DmpBlueprintCommonModelBuilder;
import eu.eudat.model.builder.commonmodels.dmpreference.DmpReferenceCommonModelBuilder; import eu.eudat.model.builder.commonmodels.dmpreference.DmpReferenceCommonModelBuilder;
import eu.eudat.model.builder.commonmodels.reference.ReferenceCommonModelBuilder;
import eu.eudat.query.*; import eu.eudat.query.*;
import gr.cite.tools.data.builder.BuilderFactory; import gr.cite.tools.data.builder.BuilderFactory;
import gr.cite.tools.data.query.Ordering; import gr.cite.tools.data.query.Ordering;
@ -49,7 +47,6 @@ public class DmpCommonModelBuilder extends BaseCommonModelBuilder<DmpModel, DmpE
private final JsonHandlingService jsonHandlingService; private final JsonHandlingService jsonHandlingService;
private FileEnvelopeModel pdfFile; private FileEnvelopeModel pdfFile;
private FileEnvelopeModel rdaJsonFile; private FileEnvelopeModel rdaJsonFile;
private FileEnvelopeModel supportingFilesZip;
private String repositoryId; private String repositoryId;
private boolean disableDescriptions; private boolean disableDescriptions;
private EnumSet<AuthorizationFlags> authorize = EnumSet.of(AuthorizationFlags.None); private EnumSet<AuthorizationFlags> authorize = EnumSet.of(AuthorizationFlags.None);
@ -79,11 +76,6 @@ public class DmpCommonModelBuilder extends BaseCommonModelBuilder<DmpModel, DmpE
return this; return this;
} }
public DmpCommonModelBuilder setSupportingFilesZip(FileEnvelopeModel supportingFilesZip) {
this.supportingFilesZip = supportingFilesZip;
return this;
}
public DmpCommonModelBuilder setRepositoryId(String repositoryId) { public DmpCommonModelBuilder setRepositoryId(String repositoryId) {
this.repositoryId = repositoryId; this.repositoryId = repositoryId;
return this; return this;
@ -94,6 +86,13 @@ public class DmpCommonModelBuilder extends BaseCommonModelBuilder<DmpModel, DmpE
return this; return this;
} }
private boolean useSharedStorage;
public DmpCommonModelBuilder useSharedStorage(boolean useSharedStorage) {
this.useSharedStorage = useSharedStorage;
return this;
}
@Override @Override
protected List<CommonModelBuilderItemResponse<DmpModel, DmpEntity>> buildInternal(List<DmpEntity> data) throws MyApplicationException { protected List<CommonModelBuilderItemResponse<DmpModel, DmpEntity>> buildInternal(List<DmpEntity> data) throws MyApplicationException {
this.logger.debug("building for {}", Optional.ofNullable(data).map(List::size).orElse(0)); this.logger.debug("building for {}", Optional.ofNullable(data).map(List::size).orElse(0));
@ -134,7 +133,6 @@ public class DmpCommonModelBuilder extends BaseCommonModelBuilder<DmpModel, DmpE
m.setUpdatedAt(d.getUpdatedAt()); m.setUpdatedAt(d.getUpdatedAt());
m.setPdfFile(this.pdfFile); m.setPdfFile(this.pdfFile);
m.setRdaJsonFile(this.rdaJsonFile); m.setRdaJsonFile(this.rdaJsonFile);
m.setSupportingFilesZip(this.supportingFilesZip);
if (d.getVersion() > (short)1) m.setPreviousDOI(this.getPreviousDOI(d.getGroupId(), d.getId())); if (d.getVersion() > (short)1) m.setPreviousDOI(this.getPreviousDOI(d.getGroupId(), d.getId()));
switch (d.getAccessType()){ switch (d.getAccessType()){
case Public -> m.setAccessType(DmpAccessType.Public); case Public -> m.setAccessType(DmpAccessType.Public);
@ -197,7 +195,7 @@ public class DmpCommonModelBuilder extends BaseCommonModelBuilder<DmpModel, DmpE
Map<UUID, List<DescriptionModel>> itemMap; Map<UUID, List<DescriptionModel>> itemMap;
DescriptionQuery query = this.queryFactory.query(DescriptionQuery.class).isActive(IsActive.Active).authorize(this.authorize).dmpIds(data.stream().map(DmpEntity::getId).distinct().collect(Collectors.toList())); DescriptionQuery query = this.queryFactory.query(DescriptionQuery.class).isActive(IsActive.Active).authorize(this.authorize).dmpIds(data.stream().map(DmpEntity::getId).distinct().collect(Collectors.toList()));
itemMap = this.builderFactory.builder(DescriptionCommonModelBuilder.class).authorize(this.authorize).asMasterKey(query, DescriptionEntity::getDmpId); itemMap = this.builderFactory.builder(DescriptionCommonModelBuilder.class).useSharedStorage(useSharedStorage).authorize(this.authorize).asMasterKey(query, DescriptionEntity::getDmpId);
return itemMap; return itemMap;
} }

View File

@ -37,7 +37,7 @@ public class DescriptionCensor extends BaseCensor {
if (fields == null || fields.isEmpty()) if (fields == null || fields.isEmpty())
return; return;
this.authService.authorizeForce(Permission.BrowseDescription); this.authService.authorizeForce(Permission.BrowseDescription, Permission.DeferredAffiliation);
FieldSet descriptionReferenceFields = fields.extractPrefixed(this.asIndexerPrefix(Description._descriptionReferences)); FieldSet descriptionReferenceFields = fields.extractPrefixed(this.asIndexerPrefix(Description._descriptionReferences));
this.censorFactory.censor(DescriptionReferenceCensor.class).censor(descriptionReferenceFields, userId); this.censorFactory.censor(DescriptionReferenceCensor.class).censor(descriptionReferenceFields, userId);

View File

@ -39,7 +39,7 @@ public class DmpCensor extends BaseCensor {
if (fields.isEmpty()) if (fields.isEmpty())
return; return;
this.authService.authorizeForce(Permission.BrowseDmp); this.authService.authorizeForce(Permission.BrowseDmp, Permission.DeferredAffiliation);
FieldSet dmpUsersFields = fields.extractPrefixed(this.asIndexerPrefix(Dmp._dmpUsers)); FieldSet dmpUsersFields = fields.extractPrefixed(this.asIndexerPrefix(Dmp._dmpUsers));
this.censorFactory.censor(DmpUserCensor.class).censor(dmpUsersFields, userId); this.censorFactory.censor(DmpUserCensor.class).censor(dmpUsersFields, userId);

View File

@ -39,7 +39,7 @@ public class DmpDescriptionTemplateCensor extends BaseCensor{
if (fields == null || fields.isEmpty()) if (fields == null || fields.isEmpty())
return; return;
this.authService.authorizeForce(Permission.BrowseDescription); this.authService.authorizeForce(Permission.BrowseDescription, Permission.DeferredAffiliation);
FieldSet dmpFields = fields.extractPrefixed(this.asIndexerPrefix(DmpDescriptionTemplate._dmp)); FieldSet dmpFields = fields.extractPrefixed(this.asIndexerPrefix(DmpDescriptionTemplate._dmp));
this.censorFactory.censor(DmpCensor.class).censor(dmpFields, userId); this.censorFactory.censor(DmpCensor.class).censor(dmpFields, userId);
FieldSet descriptionTemplatesFields = fields.extractPrefixed(this.asIndexerPrefix(DmpDescriptionTemplate._descriptionTemplates)); FieldSet descriptionTemplatesFields = fields.extractPrefixed(this.asIndexerPrefix(DmpDescriptionTemplate._descriptionTemplates));

View File

@ -38,7 +38,7 @@ public class DmpReferenceCensor extends BaseCensor {
if (fields == null || fields.isEmpty()) if (fields == null || fields.isEmpty())
return; return;
this.authService.authorizeForce(Permission.BrowseDmpDescriptionTemplate); this.authService.authorizeForce(Permission.BrowseDmpDescriptionTemplate, Permission.DeferredAffiliation);
FieldSet dmpFields = fields.extractPrefixed(this.asIndexerPrefix(DmpReference._dmp)); FieldSet dmpFields = fields.extractPrefixed(this.asIndexerPrefix(DmpReference._dmp));
this.censorFactory.censor(DmpCensor.class).censor(dmpFields, userId); this.censorFactory.censor(DmpCensor.class).censor(dmpFields, userId);
FieldSet templateFields = fields.extractPrefixed(this.asIndexerPrefix(DmpReference._reference)); FieldSet templateFields = fields.extractPrefixed(this.asIndexerPrefix(DmpReference._reference));

View File

@ -37,7 +37,7 @@ public class DmpUserCensor extends BaseCensor {
if (fields == null || fields.isEmpty()) if (fields == null || fields.isEmpty())
return; return;
this.authService.authorizeForce(Permission.BrowseDmpUser); this.authService.authorizeForce(Permission.BrowseDmpUser, Permission.DeferredAffiliation);
FieldSet dmpFields = fields.extractPrefixed(this.asIndexerPrefix(DmpUser._dmp)); FieldSet dmpFields = fields.extractPrefixed(this.asIndexerPrefix(DmpUser._dmp));
this.censorFactory.censor(DmpCensor.class).censor(dmpFields, userId); this.censorFactory.censor(DmpCensor.class).censor(dmpFields, userId);
FieldSet userFields = fields.extractPrefixed(this.asIndexerPrefix(DmpUser._user)); FieldSet userFields = fields.extractPrefixed(this.asIndexerPrefix(DmpUser._user));

View File

@ -31,6 +31,6 @@ public class EntityDoiCensor extends BaseCensor{
if (fields == null || fields.isEmpty()) if (fields == null || fields.isEmpty())
return; return;
this.authService.authorizeForce(Permission.BrowseEntityDoi); this.authService.authorizeForce(Permission.BrowseEntityDoi, Permission.DeferredAffiliation);
} }
} }

View File

@ -38,7 +38,7 @@ public class ReferenceTypeCensor extends BaseCensor {
if (fields == null || fields.isEmpty()) if (fields == null || fields.isEmpty())
return; return;
this.authService.authorizeForce(Permission.BrowseReferenceType); this.authService.authorizeForce(Permission.BrowseReferenceType, Permission.DeferredAffiliation);
FieldSet definitionFields = fields.extractPrefixed(this.asIndexerPrefix(ReferenceType._definition)); FieldSet definitionFields = fields.extractPrefixed(this.asIndexerPrefix(ReferenceType._definition));
this.censorFactory.censor(ReferenceTypeDefinitionCensor.class).censor(definitionFields, userId); this.censorFactory.censor(ReferenceTypeDefinitionCensor.class).censor(definitionFields, userId);
} }

View File

@ -37,7 +37,7 @@ public class UserCensor extends BaseCensor {
logger.debug(new DataLogEntry("censoring fields", fields)); logger.debug(new DataLogEntry("censoring fields", fields));
if (fields == null || fields.isEmpty()) if (fields == null || fields.isEmpty())
return; return;
this.authService.authorizeAtLeastOneForce(userId != null ? List.of(new OwnedResource(userId)) : null, Permission.BrowseUser); this.authService.authorizeAtLeastOneForce(userId != null ? List.of(new OwnedResource(userId)) : null, Permission.BrowseUser, Permission.DeferredAffiliation);
FieldSet rolesFields = fields.extractPrefixed(this.asIndexerPrefix(User._roles)); FieldSet rolesFields = fields.extractPrefixed(this.asIndexerPrefix(User._roles));
this.censorFactory.censor(UserRoleCensor.class).censor(rolesFields, userId); this.censorFactory.censor(UserRoleCensor.class).censor(rolesFields, userId);

View File

@ -5,6 +5,7 @@ import java.util.UUID;
public class ExportRequestModel { public class ExportRequestModel {
private UUID id; private UUID id;
private String repositoryId;
private String format; private String format;
public UUID getId() { public UUID getId() {
@ -22,4 +23,12 @@ public class ExportRequestModel {
public void setFormat(String format) { public void setFormat(String format) {
this.format = format; this.format = format;
} }
public String getRepositoryId() {
return repositoryId;
}
public void setRepositoryId(String repositoryId) {
this.repositoryId = repositoryId;
}
} }

View File

@ -5,9 +5,12 @@ import eu.eudat.authorization.Permission;
import eu.eudat.commons.enums.DmpUserRole; import eu.eudat.commons.enums.DmpUserRole;
import eu.eudat.commons.enums.IsActive; import eu.eudat.commons.enums.IsActive;
import eu.eudat.commons.scope.user.UserScope; import eu.eudat.commons.scope.user.UserScope;
import eu.eudat.data.DmpReferenceEntity;
import eu.eudat.data.DmpUserEntity; import eu.eudat.data.DmpUserEntity;
import eu.eudat.data.ReferenceEntity;
import eu.eudat.model.DmpUser; import eu.eudat.model.DmpUser;
import eu.eudat.model.PublicDmpUser; import eu.eudat.model.PublicDmpUser;
import eu.eudat.query.utils.BuildSubQueryInput;
import eu.eudat.query.utils.QueryUtilsService; import eu.eudat.query.utils.QueryUtilsService;
import gr.cite.commons.web.authz.service.AuthorizationService; import gr.cite.commons.web.authz.service.AuthorizationService;
import gr.cite.tools.data.query.FieldResolver; import gr.cite.tools.data.query.FieldResolver;
@ -173,7 +176,7 @@ public class DmpUserQuery extends QueryBase<DmpUserEntity> {
if (userId != null || usePublic ) { if (userId != null || usePublic ) {
predicates.add(queryContext.CriteriaBuilder.or( predicates.add(queryContext.CriteriaBuilder.or(
usePublic ? queryContext.CriteriaBuilder.in(queryContext.Root.get(DmpUserEntity._dmpId)).value(queryUtilsService.buildPublicDmpAuthZSubQuery(queryContext.Query, queryContext.CriteriaBuilder, usePublic)) : queryContext.CriteriaBuilder.or(), //Creates a false query usePublic ? queryContext.CriteriaBuilder.in(queryContext.Root.get(DmpUserEntity._dmpId)).value(queryUtilsService.buildPublicDmpAuthZSubQuery(queryContext.Query, queryContext.CriteriaBuilder, usePublic)) : queryContext.CriteriaBuilder.or(), //Creates a false query
userId != null ? queryContext.CriteriaBuilder.equal(queryContext.Root.get(DmpUserEntity._userId), userId) : queryContext.CriteriaBuilder.or() //Creates a false query userId != null ? queryContext.CriteriaBuilder.in(queryContext.Root.get(DmpUserEntity._dmpId)).value(queryUtilsService.buildDmpUserAuthZSubQuery(queryContext.Query, queryContext.CriteriaBuilder, userId)) : queryContext.CriteriaBuilder.or() //Creates a false query
)); ));
} }
if (!predicates.isEmpty()) { if (!predicates.isEmpty()) {

View File

@ -1,13 +1,15 @@
package eu.eudat.query; package eu.eudat.query;
import eu.eudat.authorization.AuthorizationFlags; import eu.eudat.authorization.AuthorizationFlags;
import eu.eudat.authorization.Permission;
import eu.eudat.commons.enums.EntityType; import eu.eudat.commons.enums.EntityType;
import eu.eudat.commons.enums.IsActive; import eu.eudat.commons.enums.IsActive;
import eu.eudat.commons.scope.user.UserScope; import eu.eudat.commons.scope.user.UserScope;
import eu.eudat.data.DmpEntity; import eu.eudat.data.*;
import eu.eudat.data.EntityDoiEntity;
import eu.eudat.model.Dmp; import eu.eudat.model.Dmp;
import eu.eudat.model.EntityDoi; import eu.eudat.model.EntityDoi;
import eu.eudat.query.utils.BuildSubQueryInput;
import eu.eudat.query.utils.QueryUtilsService;
import gr.cite.commons.web.authz.service.AuthorizationService; import gr.cite.commons.web.authz.service.AuthorizationService;
import gr.cite.tools.data.query.FieldResolver; import gr.cite.tools.data.query.FieldResolver;
import gr.cite.tools.data.query.QueryBase; import gr.cite.tools.data.query.QueryBase;
@ -151,10 +153,19 @@ public class EntityDoiQuery extends QueryBase<EntityDoiEntity> {
return this; return this;
} }
private final UserScope userScope;
private final AuthorizationService authService;
private final QueryUtilsService queryUtilsService;
public EntityDoiQuery( public EntityDoiQuery(
) { UserScope userScope, AuthorizationService authService, QueryUtilsService queryUtilsService) {
this.userScope = userScope;
this.authService = authService;
this.queryUtilsService = queryUtilsService;
} }
@Override @Override
@ -167,6 +178,27 @@ public class EntityDoiQuery extends QueryBase<EntityDoiEntity> {
return this.isEmpty(this.ids) || this.isEmpty(this.isActives)|| this.isEmpty(this.repositoryIds) || this.isEmpty(this.excludedIds) || this.isEmpty(this.types); return this.isEmpty(this.ids) || this.isEmpty(this.isActives)|| this.isEmpty(this.repositoryIds) || this.isEmpty(this.excludedIds) || this.isEmpty(this.types);
} }
@Override
protected <X, Y> Predicate applyAuthZ(QueryContext<X, Y> queryContext) {
if (this.authorize.contains(AuthorizationFlags.None)) return null;
if (this.authorize.contains(AuthorizationFlags.Permission) && this.authService.authorize(Permission.BrowseUser)) return null;
UUID userId;
if (this.authorize.contains(AuthorizationFlags.Owner)) userId = this.userScope.getUserIdSafe();
else userId = null;
List<Predicate> predicates = new ArrayList<>();
boolean usePublic = this.authorize.contains(AuthorizationFlags.Public);
if (userId != null || usePublic) {
predicates.add(queryContext.CriteriaBuilder.in(queryContext.Root.get(EntityDoiEntity._entityId)).value( queryContext.CriteriaBuilder.in(queryContext.Root.get(DmpUserEntity._dmpId)).value(queryUtilsService.buildDmpAuthZSubQuery(queryContext.Query, queryContext.CriteriaBuilder, userId, usePublic))));
}
if (!predicates.isEmpty()) {
Predicate[] predicatesArray = predicates.toArray(new Predicate[0]);
return queryContext.CriteriaBuilder.and(predicatesArray);
} else {
return queryContext.CriteriaBuilder.or(); //Creates a false query
}
}
@Override @Override
protected <X, Y> Predicate applyFilters(QueryContext<X, Y> queryContext) { protected <X, Y> Predicate applyFilters(QueryContext<X, Y> queryContext) {
List<Predicate> predicates = new ArrayList<>(); List<Predicate> predicates = new ArrayList<>();

View File

@ -1,12 +1,21 @@
package eu.eudat.query; package eu.eudat.query;
import eu.eudat.authorization.AuthorizationFlags; import eu.eudat.authorization.AuthorizationFlags;
import eu.eudat.authorization.Permission;
import eu.eudat.commons.enums.DmpAccessType;
import eu.eudat.commons.enums.DmpStatus;
import eu.eudat.commons.enums.IsActive; import eu.eudat.commons.enums.IsActive;
import eu.eudat.commons.enums.ReferenceSourceType; import eu.eudat.commons.enums.ReferenceSourceType;
import eu.eudat.commons.scope.user.UserScope;
import eu.eudat.data.DmpEntity;
import eu.eudat.data.DmpReferenceEntity; import eu.eudat.data.DmpReferenceEntity;
import eu.eudat.data.DmpUserEntity;
import eu.eudat.data.ReferenceEntity; import eu.eudat.data.ReferenceEntity;
import eu.eudat.model.PublicReference; import eu.eudat.model.PublicReference;
import eu.eudat.model.Reference; import eu.eudat.model.Reference;
import eu.eudat.query.utils.BuildSubQueryInput;
import eu.eudat.query.utils.QueryUtilsService;
import gr.cite.commons.web.authz.service.AuthorizationService;
import gr.cite.tools.data.query.FieldResolver; import gr.cite.tools.data.query.FieldResolver;
import gr.cite.tools.data.query.QueryBase; import gr.cite.tools.data.query.QueryBase;
import gr.cite.tools.data.query.QueryContext; import gr.cite.tools.data.query.QueryContext;
@ -163,9 +172,16 @@ public class ReferenceQuery extends QueryBase<ReferenceEntity> {
this.authorize = values; this.authorize = values;
return this; return this;
} }
private final UserScope userScope;
private final AuthorizationService authService;
private final QueryUtilsService queryUtilsService;
public ReferenceQuery( public ReferenceQuery(
) { UserScope userScope, AuthorizationService authService, QueryUtilsService queryUtilsService) {
this.userScope = userScope;
this.authService = authService;
this.queryUtilsService = queryUtilsService;
} }
@Override @Override
@ -178,6 +194,38 @@ public class ReferenceQuery extends QueryBase<ReferenceEntity> {
return this.isEmpty(this.ids) || this.isEmpty(this.isActives) || this.isEmpty(this.sources) ||this.isEmpty(this.excludedIds) || this.isEmpty(this.typeIds) || this.isEmpty(this.referenceSourceTypes)|| this.isFalseQuery(this.dmpReferenceQuery); return this.isEmpty(this.ids) || this.isEmpty(this.isActives) || this.isEmpty(this.sources) ||this.isEmpty(this.excludedIds) || this.isEmpty(this.typeIds) || this.isEmpty(this.referenceSourceTypes)|| this.isFalseQuery(this.dmpReferenceQuery);
} }
@Override
protected <X, Y> Predicate applyAuthZ(QueryContext<X, Y> queryContext) {
if (this.authorize.contains(AuthorizationFlags.None)) return null;
if (this.authorize.contains(AuthorizationFlags.Permission) && this.authService.authorize(Permission.BrowseReference)) return null;
UUID userId;
boolean usePublic = this.authorize.contains(AuthorizationFlags.Public);
if (this.authorize.contains(AuthorizationFlags.DmpAssociated)) userId = this.userScope.getUserIdSafe();
else userId = null;
List<Predicate> predicates = new ArrayList<>();
if (userId != null || usePublic ) {
predicates.add(queryContext.CriteriaBuilder.or(
queryContext.CriteriaBuilder.isNull(queryContext.Root.get(ReferenceEntity._createdById)),
userId != null ? queryContext.CriteriaBuilder.equal(queryContext.Root.get(ReferenceEntity._createdById), userId) : queryContext.CriteriaBuilder.or(), //Creates a false query
userId != null ? queryContext.CriteriaBuilder.in(queryContext.Root.get(ReferenceEntity._id)).value(queryUtilsService.buildSubQuery(new BuildSubQueryInput<>(new BuildSubQueryInput.Builder<>(DmpReferenceEntity.class, UUID.class)
.query(queryContext.Query)
.criteriaBuilder(queryContext.CriteriaBuilder)
.keyPathFunc((subQueryRoot) -> subQueryRoot.get(DmpReferenceEntity._referenceId))
.filterFunc((subQueryRoot, cb) ->
cb.in(subQueryRoot.get(DmpReferenceEntity._dmpId)).value(queryUtilsService.buildDmpAuthZSubQuery(queryContext.Query, queryContext.CriteriaBuilder, userId, usePublic))
)
))) : queryContext.CriteriaBuilder.or() //Creates a false query
));
}
if (!predicates.isEmpty()) {
Predicate[] predicatesArray = predicates.toArray(new Predicate[0]);
return queryContext.CriteriaBuilder.and(predicatesArray);
} else {
return queryContext.CriteriaBuilder.or(); //Creates a false query
}
}
@Override @Override
protected <X, Y> Predicate applyFilters(QueryContext<X, Y> queryContext) { protected <X, Y> Predicate applyFilters(QueryContext<X, Y> queryContext) {
List<Predicate> predicates = new ArrayList<>(); List<Predicate> predicates = new ArrayList<>();

View File

@ -150,11 +150,24 @@ public class UserQuery extends QueryBase<UserEntity> {
if (this.authorize.contains(AuthorizationFlags.Permission) && this.authService.authorize(Permission.BrowseUser)) return null; if (this.authorize.contains(AuthorizationFlags.Permission) && this.authService.authorize(Permission.BrowseUser)) return null;
UUID userId; UUID userId;
if (this.authorize.contains(AuthorizationFlags.Owner)) userId = this.userScope.getUserIdSafe(); if (this.authorize.contains(AuthorizationFlags.Owner)) userId = this.userScope.getUserIdSafe();
if (this.authorize.contains(AuthorizationFlags.Public)) userId = this.userScope.getUserIdSafe();
else userId = null; else userId = null;
List<Predicate> predicates = new ArrayList<>(); List<Predicate> predicates = new ArrayList<>();
if (userId != null) { boolean usePublic = this.authorize.contains(AuthorizationFlags.Public);
predicates.add(queryContext.CriteriaBuilder.in(queryContext.Root.get(UserEntity._id)).value(userId)); if (userId != null || usePublic) {
UUID finalUserId = userId;
predicates.add(queryContext.CriteriaBuilder.or(
userId != null ? queryContext.CriteriaBuilder.in(queryContext.Root.get(UserEntity._id)).value(userId) : queryContext.CriteriaBuilder.or(), //Creates a false query
queryContext.CriteriaBuilder.in(queryContext.Root.get(ReferenceEntity._id)).value(queryUtilsService.buildSubQuery(new BuildSubQueryInput<>(new BuildSubQueryInput.Builder<>(DmpUserEntity.class, UUID.class)
.query(queryContext.Query)
.criteriaBuilder(queryContext.CriteriaBuilder)
.keyPathFunc((subQueryRoot) -> subQueryRoot.get(DmpUserEntity._userId))
.filterFunc((subQueryRoot, cb) ->
cb.in(subQueryRoot.get(DmpUserEntity._dmpId)).value(queryUtilsService.buildDmpAuthZSubQuery(queryContext.Query, queryContext.CriteriaBuilder, finalUserId, usePublic))
)
)))
));
} }
if (!predicates.isEmpty()) { if (!predicates.isEmpty()) {
Predicate[] predicatesArray = predicates.toArray(new Predicate[0]); Predicate[] predicatesArray = predicates.toArray(new Predicate[0]);

View File

@ -52,7 +52,8 @@ public class QueryUtilsServiceImpl implements QueryUtilsService {
.filterFunc((subQueryRoot, cb) -> cb.or( .filterFunc((subQueryRoot, cb) -> cb.or(
usePublic ? cb.and( usePublic ? cb.and(
cb.equal(subQueryRoot.get(DescriptionEntity._status), DescriptionStatus.Finalized), cb.equal(subQueryRoot.get(DescriptionEntity._status), DescriptionStatus.Finalized),
cb.equal(subQueryRoot.get(DescriptionEntity._isActive), IsActive.Active) cb.equal(subQueryRoot.get(DescriptionEntity._isActive), IsActive.Active),
cb.in(subQueryRoot.get(DescriptionEntity._dmpId)).value(this.buildDmpAuthZSubQuery(query, criteriaBuilder, userId, usePublic))
): cb.or(), //Creates a false query ): cb.or(), //Creates a false query
userId != null ? cb.equal(subQueryRoot.get(DescriptionEntity._createdById), userId) : cb.or() //Creates a false query userId != null ? cb.equal(subQueryRoot.get(DescriptionEntity._createdById), userId) : cb.or() //Creates a false query
) )

View File

@ -3,14 +3,10 @@ package eu.eudat.service.dashborad;
import eu.eudat.authorization.AuthorizationFlags; import eu.eudat.authorization.AuthorizationFlags;
import eu.eudat.authorization.OwnedResource; import eu.eudat.authorization.OwnedResource;
import eu.eudat.authorization.Permission; import eu.eudat.authorization.Permission;
import eu.eudat.commons.JsonHandlingService;
import eu.eudat.commons.XmlHandlingService;
import eu.eudat.commons.enums.*; import eu.eudat.commons.enums.*;
import eu.eudat.commons.scope.user.UserScope; import eu.eudat.commons.scope.user.UserScope;
import eu.eudat.commons.types.dashborad.RecentActivityItemEntity; import eu.eudat.commons.types.dashborad.RecentActivityItemEntity;
import eu.eudat.convention.ConventionService; import eu.eudat.convention.ConventionService;
import eu.eudat.errorcode.ErrorThesaurusProperties;
import eu.eudat.event.EventBroker;
import eu.eudat.model.*; import eu.eudat.model.*;
import eu.eudat.model.builder.PublicReferenceTypeBuilder; import eu.eudat.model.builder.PublicReferenceTypeBuilder;
import eu.eudat.model.builder.RecentActivityItemBuilder; import eu.eudat.model.builder.RecentActivityItemBuilder;
@ -21,15 +17,12 @@ import eu.eudat.query.lookup.DmpLookup;
import eu.eudat.service.elastic.ElasticQueryHelperService; import eu.eudat.service.elastic.ElasticQueryHelperService;
import gr.cite.commons.web.authz.service.AuthorizationService; import gr.cite.commons.web.authz.service.AuthorizationService;
import gr.cite.tools.data.builder.BuilderFactory; import gr.cite.tools.data.builder.BuilderFactory;
import gr.cite.tools.data.deleter.DeleterFactory;
import gr.cite.tools.data.query.QueryFactory; import gr.cite.tools.data.query.QueryFactory;
import gr.cite.tools.fieldset.BaseFieldSet; import gr.cite.tools.fieldset.BaseFieldSet;
import gr.cite.tools.logging.LoggerService; import gr.cite.tools.logging.LoggerService;
import gr.cite.tools.logging.MapLogEntry; import gr.cite.tools.logging.MapLogEntry;
import jakarta.persistence.EntityManager;
import org.slf4j.LoggerFactory; import org.slf4j.LoggerFactory;
import org.springframework.beans.factory.annotation.Autowired; import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.context.MessageSource;
import org.springframework.stereotype.Service; import org.springframework.stereotype.Service;
import javax.management.InvalidApplicationException; import javax.management.InvalidApplicationException;
@ -76,14 +69,14 @@ public class DashboardServiceImpl implements DashboardService {
List<RecentActivityItemEntity> recentActivityItemEntities = new ArrayList<>(); List<RecentActivityItemEntity> recentActivityItemEntities = new ArrayList<>();
DescriptionLookup descriptionLookup = model.asDescriptionLookup(); DescriptionLookup descriptionLookup = model.asDescriptionLookup();
descriptionLookup.getPage().setOffset(0); descriptionLookup.getPage().setOffset(0);
QueryResult<Description> descriptions = this.elasticQueryHelperService.collect(descriptionLookup, AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic, new BaseFieldSet().ensure(Description._id).ensure(Description._updatedAt).ensure(Description._status).ensure(Description._label)); QueryResult<Description> descriptions = this.elasticQueryHelperService.collect(descriptionLookup, AuthorizationFlags.OwnerOrDmpAssociatedOrPermission, new BaseFieldSet().ensure(Description._id).ensure(Description._updatedAt).ensure(Description._status).ensure(Description._label));
if (!this.conventionService.isListNullOrEmpty(descriptions.getItems())) { if (!this.conventionService.isListNullOrEmpty(descriptions.getItems())) {
for (Description description : descriptions.getItems()) recentActivityItemEntities.add(new RecentActivityItemEntity(RecentActivityItemType.Description, description.getId(), description.getUpdatedAt(), description.getLabel(), description.getStatus().getValue())); for (Description description : descriptions.getItems()) recentActivityItemEntities.add(new RecentActivityItemEntity(RecentActivityItemType.Description, description.getId(), description.getUpdatedAt(), description.getLabel(), description.getStatus().getValue()));
} }
DmpLookup dmpLookup = model.asDmpLookup(); DmpLookup dmpLookup = model.asDmpLookup();
dmpLookup.getPage().setOffset(0); dmpLookup.getPage().setOffset(0);
QueryResult<Dmp> dmps = this.elasticQueryHelperService.collect(dmpLookup, AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic, new BaseFieldSet().ensure(Dmp._id).ensure(Dmp._updatedAt).ensure(Dmp._label).ensure(Dmp._status)); QueryResult<Dmp> dmps = this.elasticQueryHelperService.collect(dmpLookup, AuthorizationFlags.OwnerOrDmpAssociatedOrPermission, new BaseFieldSet().ensure(Dmp._id).ensure(Dmp._updatedAt).ensure(Dmp._label).ensure(Dmp._status));
if (!this.conventionService.isListNullOrEmpty(dmps.getItems())) { if (!this.conventionService.isListNullOrEmpty(dmps.getItems())) {
for (Dmp dmp : dmps.getItems()) recentActivityItemEntities.add(new RecentActivityItemEntity(RecentActivityItemType.Dmp, dmp.getId(), dmp.getUpdatedAt(), dmp.getLabel(), dmp.getStatus().getValue())); for (Dmp dmp : dmps.getItems()) recentActivityItemEntities.add(new RecentActivityItemEntity(RecentActivityItemType.Dmp, dmp.getId(), dmp.getUpdatedAt(), dmp.getLabel(), dmp.getStatus().getValue()));
} }
@ -102,7 +95,7 @@ public class DashboardServiceImpl implements DashboardService {
if (model.getPage() != null){ if (model.getPage() != null){
recentActivityItemEntities = recentActivityItemEntities.stream().skip(model.getPage().getOffset()).limit(model.getPage().getSize()).toList(); recentActivityItemEntities = recentActivityItemEntities.stream().skip(model.getPage().getOffset()).limit(model.getPage().getSize()).toList();
} }
return this.builderFactory.builder(RecentActivityItemBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).build(BaseFieldSet.build(model.getProject()), recentActivityItemEntities); return this.builderFactory.builder(RecentActivityItemBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission).build(BaseFieldSet.build(model.getProject()), recentActivityItemEntities);
} }
@Override @Override

View File

@ -4,18 +4,26 @@ import eu.eudat.authorization.AuthorizationFlags;
import eu.eudat.authorization.Permission; import eu.eudat.authorization.Permission;
import eu.eudat.commonmodels.models.FileEnvelopeModel; import eu.eudat.commonmodels.models.FileEnvelopeModel;
import eu.eudat.commonmodels.models.dmp.DmpModel; import eu.eudat.commonmodels.models.dmp.DmpModel;
import eu.eudat.commons.enums.StorageType;
import eu.eudat.commons.scope.user.UserScope;
import eu.eudat.configurations.deposit.DepositProperties; import eu.eudat.configurations.deposit.DepositProperties;
import eu.eudat.convention.ConventionService;
import eu.eudat.data.DmpEntity; import eu.eudat.data.DmpEntity;
import eu.eudat.depositinterface.repository.DepositClient; import eu.eudat.depositinterface.repository.DepositClient;
import eu.eudat.depositinterface.repository.DepositConfiguration; import eu.eudat.depositinterface.repository.DepositConfiguration;
import eu.eudat.model.EntityDoi; import eu.eudat.model.EntityDoi;
import eu.eudat.model.StorageFile;
import eu.eudat.model.builder.commonmodels.DepositConfigurationBuilder; import eu.eudat.model.builder.commonmodels.DepositConfigurationBuilder;
import eu.eudat.model.builder.commonmodels.dmp.DmpCommonModelBuilder; import eu.eudat.model.builder.commonmodels.dmp.DmpCommonModelBuilder;
import eu.eudat.model.persist.StorageFilePersist;
import eu.eudat.model.persist.deposit.DepositAuthenticateRequest; import eu.eudat.model.persist.deposit.DepositAuthenticateRequest;
import eu.eudat.model.persist.deposit.DepositRequest; import eu.eudat.model.persist.deposit.DepositRequest;
import eu.eudat.model.persist.EntityDoiPersist; import eu.eudat.model.persist.EntityDoiPersist;
import eu.eudat.query.DmpQuery; import eu.eudat.query.DmpQuery;
import eu.eudat.service.entitydoi.EntityDoiService; import eu.eudat.service.entitydoi.EntityDoiService;
import eu.eudat.service.storage.StorageFileProperties;
import eu.eudat.service.storage.StorageFileService;
import eu.eudat.service.transformer.FileTransformerService;
import gr.cite.commons.web.oidc.filter.webflux.TokenExchangeCacheService; import gr.cite.commons.web.oidc.filter.webflux.TokenExchangeCacheService;
import gr.cite.commons.web.authz.service.AuthorizationService; import gr.cite.commons.web.authz.service.AuthorizationService;
import gr.cite.commons.web.oidc.filter.webflux.TokenExchangeFilterFunction; import gr.cite.commons.web.oidc.filter.webflux.TokenExchangeFilterFunction;
@ -23,7 +31,10 @@ import gr.cite.commons.web.oidc.filter.webflux.TokenExchangeModel;
import gr.cite.tools.data.builder.BuilderFactory; import gr.cite.tools.data.builder.BuilderFactory;
import gr.cite.tools.data.query.QueryFactory; import gr.cite.tools.data.query.QueryFactory;
import gr.cite.tools.exception.MyNotFoundException; import gr.cite.tools.exception.MyNotFoundException;
import gr.cite.tools.fieldset.BaseFieldSet;
import gr.cite.tools.fieldset.FieldSet; import gr.cite.tools.fieldset.FieldSet;
import gr.cite.tools.validation.ValidatorFactory;
import org.apache.commons.io.FilenameUtils;
import org.slf4j.Logger; import org.slf4j.Logger;
import org.slf4j.LoggerFactory; import org.slf4j.LoggerFactory;
import org.springframework.beans.factory.annotation.Autowired; import org.springframework.beans.factory.annotation.Autowired;
@ -32,11 +43,11 @@ import org.springframework.context.i18n.LocaleContextHolder;
import org.springframework.stereotype.Service; import org.springframework.stereotype.Service;
import org.springframework.web.reactive.function.client.WebClient; import org.springframework.web.reactive.function.client.WebClient;
import java.io.IOException;
import java.net.URI; import java.net.URI;
import java.util.ArrayList; import java.net.URLConnection;
import java.util.HashMap; import java.time.Duration;
import java.util.List; import java.util.*;
import java.util.Map;
@Service @Service
public class DepositServiceImpl implements DepositService { public class DepositServiceImpl implements DepositService {
@ -52,7 +63,12 @@ public class DepositServiceImpl implements DepositService {
private final MessageSource messageSource; private final MessageSource messageSource;
private final BuilderFactory builderFactory; private final BuilderFactory builderFactory;
private final DepositConfigurationCacheService depositConfigurationCacheService; private final DepositConfigurationCacheService depositConfigurationCacheService;
private final FileTransformerService fileTransformerService;
private final StorageFileService storageFileService;
private final UserScope userScope;
private final ValidatorFactory validatorFactory;
private final StorageFileProperties storageFileProperties;
private final ConventionService conventionService;
@Autowired @Autowired
public DepositServiceImpl(DepositProperties depositProperties, public DepositServiceImpl(DepositProperties depositProperties,
TokenExchangeCacheService tokenExchangeCacheService, TokenExchangeCacheService tokenExchangeCacheService,
@ -61,7 +77,7 @@ public class DepositServiceImpl implements DepositService {
EntityDoiService doiService, EntityDoiService doiService,
QueryFactory queryFactory, QueryFactory queryFactory,
MessageSource messageSource, MessageSource messageSource,
BuilderFactory builderFactory, DepositConfigurationCacheService depositConfigurationCacheService) { BuilderFactory builderFactory, DepositConfigurationCacheService depositConfigurationCacheService, FileTransformerService fileTransformerService, StorageFileService storageFileService, UserScope userScope, ValidatorFactory validatorFactory, StorageFileProperties storageFileProperties, ConventionService conventionService) {
this.depositProperties = depositProperties; this.depositProperties = depositProperties;
this.tokenExchangeCacheService = tokenExchangeCacheService; this.tokenExchangeCacheService = tokenExchangeCacheService;
this.authorizationService = authorizationService; this.authorizationService = authorizationService;
@ -71,6 +87,12 @@ public class DepositServiceImpl implements DepositService {
this.messageSource = messageSource; this.messageSource = messageSource;
this.builderFactory = builderFactory; this.builderFactory = builderFactory;
this.depositConfigurationCacheService = depositConfigurationCacheService; this.depositConfigurationCacheService = depositConfigurationCacheService;
this.fileTransformerService = fileTransformerService;
this.storageFileService = storageFileService;
this.userScope = userScope;
this.validatorFactory = validatorFactory;
this.storageFileProperties = storageFileProperties;
this.conventionService = conventionService;
this.clients = new HashMap<>(); this.clients = new HashMap<>();
} }
@ -130,29 +152,31 @@ public class DepositServiceImpl implements DepositService {
//GK: Forth make the required files to be uploaded with the deposit //GK: Forth make the required files to be uploaded with the deposit
//TODO: Properly create required files //TODO: Properly create required files
FileEnvelopeModel docEnvelope = new FileEnvelopeModel(); DepositProperties.DepositSource source = depositProperties.getSources().stream().filter(depositSource -> depositSource.getRepositoryId().equals(dmpDepositModel.getRepositoryId())).findFirst().orElse(null);
if (source == null) throw new MyNotFoundException(messageSource.getMessage("General_ItemNotFound", new Object[]{dmpDepositModel.getRepositoryId(), DepositProperties.DepositSource.class.getSimpleName()}, LocaleContextHolder.getLocale()));
eu.eudat.model.file.FileEnvelope pdfFile = this.fileTransformerService.exportDmp(dmpEntity.getId(), source.getPdfTransformerId(),"pdf");
eu.eudat.model.file.FileEnvelope rda = this.fileTransformerService.exportDmp(dmpEntity.getId(), source.getRdaTransformerId(),"json");
FileEnvelopeModel pdfEnvelope = new FileEnvelopeModel(); FileEnvelopeModel pdfEnvelope = new FileEnvelopeModel();
FileEnvelopeModel jsonEnvelope = new FileEnvelopeModel(); FileEnvelopeModel jsonEnvelope = new FileEnvelopeModel();
FileEnvelopeModel zip = new FileEnvelopeModel();
//TODO: Create Files pdfEnvelope.setFilename(pdfFile.getFilename());
// File zip = new File(environment.getProperty("temp.temp") + UUID.randomUUID() + ".zip"); jsonEnvelope.setMimeType("application/pdf");
// try { jsonEnvelope.setFilename(rda.getFilename());
// docEnvelope.setFilename("test.docx"); jsonEnvelope.setMimeType("application/json");
// docEnvelope.setFile(this.storageFileService.getH2020TemplateFile()); if (!depositClient.getConfiguration().isUseSharedStorage()){
// File pdfFile = PDFUtils.convertToPDF(docEnvelope, environment); pdfEnvelope.setFile(pdfFile.getFile());
// pdfEnvelope.setFilename("test.pdf"); jsonEnvelope.setFile(rda.getFile());
// pdfEnvelope.setFile(pdfFile); } else {
// File jsonFile = new File(this.environment.getProperty("temp.temp") + UUID.randomUUID() + ".json"); pdfEnvelope.setFileRef(this.addFileToSharedStorage(pdfFile));
// jsonEnvelope.setFilename("test.json"); jsonEnvelope.setFileRef(this.addFileToSharedStorage(rda));
// jsonEnvelope.setFile(jsonFile); }
//
// } catch (IOException e) {
// logger.error(e.getMessage(), e);
// }
//GK: Fifth Transform them to the DepositModel //GK: Fifth Transform them to the DepositModel
DmpModel depositModel = this.builderFactory.builder(DmpCommonModelBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic) DmpModel depositModel = this.builderFactory.builder(DmpCommonModelBuilder.class).useSharedStorage(depositClient.getConfiguration().isUseSharedStorage()).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission)
.setRepositoryId(dmpDepositModel.getRepositoryId()).setPdfFile(pdfEnvelope).setRdaJsonFile(jsonEnvelope).setSupportingFilesZip(zip).build(dmpEntity); .setRepositoryId(dmpDepositModel.getRepositoryId()).setPdfFile(pdfEnvelope).setRdaJsonFile(jsonEnvelope).build(dmpEntity);
//GK: Sixth Perform the deposit //GK: Sixth Perform the deposit
String doi = depositClient.deposit(depositModel, dmpDepositModel.getAccessToken()); String doi = depositClient.deposit(depositModel, dmpDepositModel.getAccessToken());
@ -166,6 +190,19 @@ public class DepositServiceImpl implements DepositService {
return doiService.persist(doiPersist, dmpDepositModel.getProject()); return doiService.persist(doiPersist, dmpDepositModel.getProject());
} }
private String addFileToSharedStorage(eu.eudat.model.file.FileEnvelope file) throws IOException {
StorageFilePersist storageFilePersist = new StorageFilePersist();
storageFilePersist.setName(FilenameUtils.removeExtension(file.getFilename()));
storageFilePersist.setExtension(FilenameUtils.getExtension(file.getFilename()));
storageFilePersist.setMimeType(URLConnection.guessContentTypeFromName(file.getFilename()));
storageFilePersist.setOwnerId(this.userScope.getUserIdSafe());
storageFilePersist.setStorageType(StorageType.Temp);
storageFilePersist.setLifetime(Duration.ofSeconds(this.storageFileProperties.getTempStoreLifetimeSeconds())); //TODO
this.validatorFactory.validator(StorageFilePersist.StorageFilePersistValidator.class).validateForce(storageFilePersist);
StorageFile persisted = this.storageFileService.persistBytes(storageFilePersist, file.getFile(), new BaseFieldSet(StorageFile._id, StorageFile._fileRef));
return persisted.getFileRef();
}
@Override @Override
public String getLogo(String repositoryId) { public String getLogo(String repositoryId) {
this.authorizationService.authorizeForce(Permission.BrowseDeposit); this.authorizationService.authorizeForce(Permission.BrowseDeposit);

View File

@ -20,7 +20,6 @@ import eu.eudat.data.*;
import eu.eudat.errorcode.ErrorThesaurusProperties; import eu.eudat.errorcode.ErrorThesaurusProperties;
import eu.eudat.event.DescriptionTouchedEvent; import eu.eudat.event.DescriptionTouchedEvent;
import eu.eudat.event.EventBroker; import eu.eudat.event.EventBroker;
import eu.eudat.integrationevent.outbox.descriptiontouched.DescriptionTouchedIntegrationEvent;
import eu.eudat.integrationevent.outbox.descriptiontouched.DescriptionTouchedIntegrationEventHandler; import eu.eudat.integrationevent.outbox.descriptiontouched.DescriptionTouchedIntegrationEventHandler;
import eu.eudat.integrationevent.outbox.notification.NotifyIntegrationEvent; import eu.eudat.integrationevent.outbox.notification.NotifyIntegrationEvent;
import eu.eudat.integrationevent.outbox.notification.NotifyIntegrationEventHandler; import eu.eudat.integrationevent.outbox.notification.NotifyIntegrationEventHandler;
@ -208,7 +207,7 @@ public class DescriptionServiceImpl implements DescriptionService {
this.descriptionTouchedIntegrationEventHandler.handle(DescriptionTouchedIntegrationEventHandler.buildEventFromPersistModel(model)); this.descriptionTouchedIntegrationEventHandler.handle(DescriptionTouchedIntegrationEventHandler.buildEventFromPersistModel(model));
this.elasticService.persistDescription(data); this.elasticService.persistDescription(data);
return this.builderFactory.builder(DescriptionBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).build(BaseFieldSet.build(fields, Description._id), data); return this.builderFactory.builder(DescriptionBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission).build(BaseFieldSet.build(fields, Description._id), data);
} }
private void sendNotification(DescriptionEntity description) throws InvalidApplicationException { private void sendNotification(DescriptionEntity description) throws InvalidApplicationException {
@ -358,7 +357,7 @@ public class DescriptionServiceImpl implements DescriptionService {
this.elasticService.persistDescription(data); this.elasticService.persistDescription(data);
this.eventBroker.emit(new DescriptionTouchedEvent(data.getId())); this.eventBroker.emit(new DescriptionTouchedEvent(data.getId()));
} }
return this.builderFactory.builder(DescriptionBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).build(BaseFieldSet.build(fields, Description._id), data); return this.builderFactory.builder(DescriptionBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission).build(BaseFieldSet.build(fields, Description._id), data);
} }
private @NotNull PropertyDefinitionEntity buildPropertyDefinitionEntity(PropertyDefinitionPersist persist, eu.eudat.commons.types.descriptiontemplate.DefinitionEntity definition, Map<String, List<UUID>> fieldToReferenceMap){ private @NotNull PropertyDefinitionEntity buildPropertyDefinitionEntity(PropertyDefinitionPersist persist, eu.eudat.commons.types.descriptiontemplate.DefinitionEntity definition, Map<String, List<UUID>> fieldToReferenceMap){
@ -746,7 +745,7 @@ public class DescriptionServiceImpl implements DescriptionService {
public StorageFile uploadFieldFile(DescriptionFieldFilePersist model, MultipartFile file, FieldSet fields) throws IOException { public StorageFile uploadFieldFile(DescriptionFieldFilePersist model, MultipartFile file, FieldSet fields) throws IOException {
this.authorizationService.authorizeForce(Permission.EditDescription); this.authorizationService.authorizeForce(Permission.EditDescription);
DescriptionTemplateEntity descriptionTemplate = this.queryFactory.query(DescriptionTemplateQuery.class).ids(model.getDescriptionTemplateId()).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).first(); DescriptionTemplateEntity descriptionTemplate = this.queryFactory.query(DescriptionTemplateQuery.class).ids(model.getDescriptionTemplateId()).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission).first();
if (descriptionTemplate == null) throw new MyNotFoundException(messageSource.getMessage("General_ItemNotFound", new Object[]{model.getDescriptionTemplateId(), DescriptionTemplate.class.getSimpleName()}, LocaleContextHolder.getLocale())); if (descriptionTemplate == null) throw new MyNotFoundException(messageSource.getMessage("General_ItemNotFound", new Object[]{model.getDescriptionTemplateId(), DescriptionTemplate.class.getSimpleName()}, LocaleContextHolder.getLocale()));
eu.eudat.commons.types.descriptiontemplate.DefinitionEntity definition = this.xmlHandlingService.fromXmlSafe(eu.eudat.commons.types.descriptiontemplate.DefinitionEntity.class, descriptionTemplate.getDefinition()); eu.eudat.commons.types.descriptiontemplate.DefinitionEntity definition = this.xmlHandlingService.fromXmlSafe(eu.eudat.commons.types.descriptiontemplate.DefinitionEntity.class, descriptionTemplate.getDefinition());

View File

@ -202,7 +202,7 @@ public class DescriptionTemplateServiceImpl implements DescriptionTemplateServic
this.entityManager.persist(data); this.entityManager.persist(data);
this.persistUsers(data.getId(), model.getUsers()); this.persistUsers(data.getId(), model.getUsers());
if (!isUpdate) if (this.conventionService.isListNullOrEmpty(model.getUsers()))
this.addOwner(data); this.addOwner(data);
this.entityManager.flush(); this.entityManager.flush();
@ -211,7 +211,7 @@ public class DescriptionTemplateServiceImpl implements DescriptionTemplateServic
this.entityManager.flush(); this.entityManager.flush();
return this.builderFactory.builder(DescriptionTemplateBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).build(BaseFieldSet.build(fields, DescriptionTemplate._id), data); return this.builderFactory.builder(DescriptionTemplateBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission).build(BaseFieldSet.build(fields, DescriptionTemplate._id), data);
} }
private void updateVersionStatusAndSave(DescriptionTemplateEntity data, DescriptionTemplateStatus previousStatus, DescriptionTemplateStatus newStatus) { private void updateVersionStatusAndSave(DescriptionTemplateEntity data, DescriptionTemplateStatus previousStatus, DescriptionTemplateStatus newStatus) {
@ -260,9 +260,9 @@ public class DescriptionTemplateServiceImpl implements DescriptionTemplateServic
this.sendDescriptionTemplateInvitationEvent(data, NotificationContactType.EMAIL); this.sendDescriptionTemplateInvitationEvent(data, NotificationContactType.EMAIL);
this.sendDescriptionTemplateInvitationEvent(data, NotificationContactType.IN_APP); this.sendDescriptionTemplateInvitationEvent(data, NotificationContactType.IN_APP);
} }
updatedCreatedIds.add(data.getId()); updatedCreatedIds.add(data.getUserId());
} }
List<UserDescriptionTemplateEntity> toDelete = items.stream().filter(x -> updatedCreatedIds.stream().noneMatch(y -> y.equals(x.getId()))).collect(Collectors.toList()); List<UserDescriptionTemplateEntity> toDelete = items.stream().filter(x -> updatedCreatedIds.stream().noneMatch(y -> y.equals(x.getUserId()))).collect(Collectors.toList());
this.deleterFactory.deleter(UserDescriptionTemplateDeleter.class).delete(toDelete); this.deleterFactory.deleter(UserDescriptionTemplateDeleter.class).delete(toDelete);
} }
@ -470,8 +470,8 @@ public class DescriptionTemplateServiceImpl implements DescriptionTemplateServic
this.authorizationService.authorizeForce(Permission.CloneDescriptionTemplate); this.authorizationService.authorizeForce(Permission.CloneDescriptionTemplate);
DescriptionTemplateQuery query = this.queryFactory.query(DescriptionTemplateQuery.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).ids(id); DescriptionTemplateQuery query = this.queryFactory.query(DescriptionTemplateQuery.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission).ids(id);
DescriptionTemplate model = this.builderFactory.builder(DescriptionTemplateBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).build(fields, query.firstAs(fields)); DescriptionTemplate model = this.builderFactory.builder(DescriptionTemplateBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission).build(fields, query.firstAs(fields));
if (model == null) if (model == null)
throw new MyNotFoundException(messageSource.getMessage("General_ItemNotFound", new Object[]{id, DescriptionTemplate.class.getSimpleName()}, LocaleContextHolder.getLocale())); throw new MyNotFoundException(messageSource.getMessage("General_ItemNotFound", new Object[]{id, DescriptionTemplate.class.getSimpleName()}, LocaleContextHolder.getLocale()));
@ -603,7 +603,7 @@ public class DescriptionTemplateServiceImpl implements DescriptionTemplateServic
this.entityManager.flush(); this.entityManager.flush();
return this.builderFactory.builder(DescriptionTemplateBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).build(BaseFieldSet.build(fields, DescriptionTemplate._id), data); return this.builderFactory.builder(DescriptionTemplateBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission).build(BaseFieldSet.build(fields, DescriptionTemplate._id), data);
} }
//endregion //endregion

View File

@ -106,7 +106,7 @@ public class DescriptionTemplateTypeServiceImpl implements DescriptionTemplateTy
this.entityManager.flush(); this.entityManager.flush();
this.eventBroker.emit(new DescriptionTemplateTypeTouchedEvent(data.getId())); this.eventBroker.emit(new DescriptionTemplateTypeTouchedEvent(data.getId()));
return this.builderFactory.builder(DescriptionTemplateTypeBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).build(BaseFieldSet.build(fields, DescriptionTemplateType._id), data); return this.builderFactory.builder(DescriptionTemplateTypeBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission).build(BaseFieldSet.build(fields, DescriptionTemplateType._id), data);
} }
public void deleteAndSave(UUID id) throws MyForbiddenException, InvalidApplicationException { public void deleteAndSave(UUID id) throws MyForbiddenException, InvalidApplicationException {

View File

@ -34,7 +34,7 @@ public interface DmpService {
List<DmpUser> assignUsers(UUID dmp, List<DmpUserPersist> model, FieldSet fields) throws InvalidApplicationException, IOException; List<DmpUser> assignUsers(UUID dmp, List<DmpUserPersist> model, FieldSet fields) throws InvalidApplicationException, IOException;
Dmp removeUser(DmpUserRemovePersist model, FieldSet fields) throws InvalidApplicationException, IOException; Dmp removeUser(DmpUserRemovePersist model, FieldSet fields) throws InvalidApplicationException, IOException;
ResponseEntity<byte[]> export(UUID id, String exportType) throws InvalidApplicationException, IOException; ResponseEntity<byte[]> export(UUID id, String transformerId, String exportType) throws InvalidApplicationException, IOException;
void inviteUsers(UUID id, List<DmpUserPersist> users) throws InvalidApplicationException, JAXBException, IOException; void inviteUsers(UUID id, List<DmpUserPersist> users) throws InvalidApplicationException, JAXBException, IOException;

View File

@ -23,6 +23,7 @@ import eu.eudat.data.*;
import eu.eudat.errorcode.ErrorThesaurusProperties; import eu.eudat.errorcode.ErrorThesaurusProperties;
import eu.eudat.event.DmpTouchedEvent; import eu.eudat.event.DmpTouchedEvent;
import eu.eudat.event.EventBroker; import eu.eudat.event.EventBroker;
import eu.eudat.integrationevent.outbox.annotationentitytouch.AnnotationEntityTouchedIntegrationEventHandler;
import eu.eudat.integrationevent.outbox.dmptouched.DmpTouchedIntegrationEventHandler; import eu.eudat.integrationevent.outbox.dmptouched.DmpTouchedIntegrationEventHandler;
import eu.eudat.integrationevent.outbox.notification.NotifyIntegrationEvent; import eu.eudat.integrationevent.outbox.notification.NotifyIntegrationEvent;
import eu.eudat.integrationevent.outbox.notification.NotifyIntegrationEventHandler; import eu.eudat.integrationevent.outbox.notification.NotifyIntegrationEventHandler;
@ -74,7 +75,6 @@ import javax.management.InvalidApplicationException;
import javax.xml.parsers.ParserConfigurationException; import javax.xml.parsers.ParserConfigurationException;
import javax.xml.transform.TransformerException; import javax.xml.transform.TransformerException;
import java.io.IOException; import java.io.IOException;
import java.nio.file.Files;
import java.time.Instant; import java.time.Instant;
import java.util.*; import java.util.*;
import java.util.stream.Collectors; import java.util.stream.Collectors;
@ -123,6 +123,8 @@ public class DmpServiceImpl implements DmpService {
private final DmpTouchedIntegrationEventHandler dmpTouchedIntegrationEventHandler; private final DmpTouchedIntegrationEventHandler dmpTouchedIntegrationEventHandler;
private final AnnotationEntityTouchedIntegrationEventHandler annotationEntityTouchedIntegrationEventHandler;
@Autowired @Autowired
public DmpServiceImpl( public DmpServiceImpl(
EntityManager entityManager, EntityManager entityManager,
@ -143,7 +145,9 @@ public class DmpServiceImpl implements DmpService {
ActionConfirmationService actionConfirmationService, ActionConfirmationService actionConfirmationService,
FileTransformerService fileTransformerService, FileTransformerService fileTransformerService,
ValidatorFactory validatorFactory, ValidatorFactory validatorFactory,
ElasticService elasticService, DmpTouchedIntegrationEventHandler dmpTouchedIntegrationEventHandler) { ElasticService elasticService,
DmpTouchedIntegrationEventHandler dmpTouchedIntegrationEventHandler,
AnnotationEntityTouchedIntegrationEventHandler annotationEntityTouchedIntegrationEventHandler) {
this.entityManager = entityManager; this.entityManager = entityManager;
this.authorizationService = authorizationService; this.authorizationService = authorizationService;
this.deleterFactory = deleterFactory; this.deleterFactory = deleterFactory;
@ -164,6 +168,7 @@ public class DmpServiceImpl implements DmpService {
this.validatorFactory = validatorFactory; this.validatorFactory = validatorFactory;
this.elasticService = elasticService; this.elasticService = elasticService;
this.dmpTouchedIntegrationEventHandler = dmpTouchedIntegrationEventHandler; this.dmpTouchedIntegrationEventHandler = dmpTouchedIntegrationEventHandler;
this.annotationEntityTouchedIntegrationEventHandler = annotationEntityTouchedIntegrationEventHandler;
} }
public Dmp persist(DmpPersist model, FieldSet fields) throws MyForbiddenException, MyValidationException, MyApplicationException, MyNotFoundException, InvalidApplicationException, JAXBException, IOException { public Dmp persist(DmpPersist model, FieldSet fields) throws MyForbiddenException, MyValidationException, MyApplicationException, MyNotFoundException, InvalidApplicationException, JAXBException, IOException {
@ -184,15 +189,33 @@ public class DmpServiceImpl implements DmpService {
this.dmpTouchedIntegrationEventHandler.handle(DmpTouchedIntegrationEventHandler.buildEventFromPersistModel(model)); this.dmpTouchedIntegrationEventHandler.handle(DmpTouchedIntegrationEventHandler.buildEventFromPersistModel(model));
this.sendNotification(data); this.annotationEntityTouchedIntegrationEventHandler.handle(AnnotationEntityTouchedIntegrationEventHandler.buildEventFromPersistModel(model));
this.elasticService.persistDmp(data); this.sendNotification(data);
if (!this.conventionService.isListNullOrEmpty(model.getUsers())){ if (!this.conventionService.isListNullOrEmpty(model.getUsers())){
this.inviteUsers(data.getId(), model.getUsers()); this.inviteUsers(data.getId(), model.getUsers());
}else{
this.assignUsers(data.getId(), new ArrayList<>(), null);
this.addOwner(data);
} }
return this.builderFactory.builder(DmpBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).build(BaseFieldSet.build(fields, Dmp._id, Dmp._hash), data); this.elasticService.persistDmp(data);
return this.builderFactory.builder(DmpBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission).build(BaseFieldSet.build(fields, Dmp._id, Dmp._hash), data);
}
private void addOwner(DmpEntity dmpEntity) throws InvalidApplicationException {
DmpUserEntity data = new DmpUserEntity();
data.setId(UUID.randomUUID());
data.setIsActive(IsActive.Active);
data.setCreatedAt(Instant.now());
data.setUpdatedAt(Instant.now());
data.setRole(DmpUserRole.Owner);
data.setUserId(userScope.getUserId());
data.setDmpId(dmpEntity.getId());
this.entityManager.persist(data);
} }
private void sendNotification(DmpEntity dmp) throws InvalidApplicationException { private void sendNotification(DmpEntity dmp) throws InvalidApplicationException {
@ -368,7 +391,7 @@ public class DmpServiceImpl implements DmpService {
public Dmp buildClone(CloneDmpPersist model, FieldSet fields) throws MyForbiddenException, MyValidationException, MyApplicationException, MyNotFoundException, IOException, InvalidApplicationException { public Dmp buildClone(CloneDmpPersist model, FieldSet fields) throws MyForbiddenException, MyValidationException, MyApplicationException, MyNotFoundException, IOException, InvalidApplicationException {
this.authorizationService.authorizeForce(Permission.CloneDmp); this.authorizationService.authorizeForce(Permission.CloneDmp);
DmpEntity existingDmpEntity = this.queryFactory.query(DmpQuery.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).ids(model.getId()).firstAs(fields); DmpEntity existingDmpEntity = this.queryFactory.query(DmpQuery.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission).ids(model.getId()).firstAs(fields);
if (!this.conventionService.isValidGuid(model.getId()) || existingDmpEntity == null) if (!this.conventionService.isValidGuid(model.getId()) || existingDmpEntity == null)
throw new MyNotFoundException(messageSource.getMessage("General_ItemNotFound", new Object[]{model.getId(), Dmp.class.getSimpleName()}, LocaleContextHolder.getLocale())); throw new MyNotFoundException(messageSource.getMessage("General_ItemNotFound", new Object[]{model.getId(), Dmp.class.getSimpleName()}, LocaleContextHolder.getLocale()));
@ -493,7 +516,7 @@ public class DmpServiceImpl implements DmpService {
.collect(); .collect();
this.elasticService.persistDmp(dmpEntity); this.elasticService.persistDmp(dmpEntity);
return this.builderFactory.builder(DmpUserBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).build(BaseFieldSet.build(fieldSet, DmpUser._id, DmpUser._hash), persisted); return this.builderFactory.builder(DmpUserBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission).build(BaseFieldSet.build(fieldSet, DmpUser._id, DmpUser._hash), persisted);
} }
@Override @Override
@ -514,14 +537,14 @@ public class DmpServiceImpl implements DmpService {
if (dmpEntity == null) throw new MyNotFoundException(messageSource.getMessage("General_ItemNotFound", new Object[]{model.getDmpId(), Dmp.class.getSimpleName()}, LocaleContextHolder.getLocale())); if (dmpEntity == null) throw new MyNotFoundException(messageSource.getMessage("General_ItemNotFound", new Object[]{model.getDmpId(), Dmp.class.getSimpleName()}, LocaleContextHolder.getLocale()));
this.elasticService.persistDmp(dmpEntity); this.elasticService.persistDmp(dmpEntity);
return this.builderFactory.builder(DmpBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).build(BaseFieldSet.build(fields, Dmp._id, Dmp._hash), data); return this.builderFactory.builder(DmpBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission).build(BaseFieldSet.build(fields, Dmp._id, Dmp._hash), data);
} }
@Override @Override
public ResponseEntity<byte[]> export(UUID id, String exportType) throws InvalidApplicationException, IOException { public ResponseEntity<byte[]> export(UUID id, String transformerId, String exportType) throws InvalidApplicationException, IOException {
HttpHeaders headers = new HttpHeaders(); HttpHeaders headers = new HttpHeaders();
FileEnvelope fileEnvelope = this.fileTransformerService.exportDmp(id, exportType); FileEnvelope fileEnvelope = this.fileTransformerService.exportDmp(id, transformerId, exportType);
headers.add("Content-Disposition", "attachment;filename=" + fileEnvelope.getFilename()); headers.add("Content-Disposition", "attachment;filename=" + fileEnvelope.getFilename());
byte[] data = fileEnvelope.getFile(); byte[] data = fileEnvelope.getFile();
headers.setContentType(MediaType.APPLICATION_OCTET_STREAM); headers.setContentType(MediaType.APPLICATION_OCTET_STREAM);
@ -532,7 +555,6 @@ public class DmpServiceImpl implements DmpService {
Boolean isUpdate = this.conventionService.isValidGuid(model.getId()); Boolean isUpdate = this.conventionService.isValidGuid(model.getId());
DmpEntity data; DmpEntity data;
DmpUserEntity dmpUserEntity = new DmpUserEntity();
if (isUpdate) { if (isUpdate) {
data = this.entityManager.find(DmpEntity.class, model.getId()); data = this.entityManager.find(DmpEntity.class, model.getId());
if (data == null) throw new MyNotFoundException(messageSource.getMessage("General_ItemNotFound", new Object[]{model.getId(), Dmp.class.getSimpleName()}, LocaleContextHolder.getLocale())); if (data == null) throw new MyNotFoundException(messageSource.getMessage("General_ItemNotFound", new Object[]{model.getId(), Dmp.class.getSimpleName()}, LocaleContextHolder.getLocale()));
@ -553,17 +575,10 @@ public class DmpServiceImpl implements DmpService {
data.setBlueprintId(model.getBlueprint()); data.setBlueprintId(model.getBlueprint());
data.setIsActive(IsActive.Active); data.setIsActive(IsActive.Active);
data.setCreatedAt(Instant.now()); data.setCreatedAt(Instant.now());
dmpUserEntity.setId(UUID.randomUUID());
dmpUserEntity.setDmpId(data.getId());
dmpUserEntity.setUserId(userScope.getUserId());
dmpUserEntity.setRole(DmpUserRole.Owner);
dmpUserEntity.setCreatedAt(Instant.now());
dmpUserEntity.setUpdatedAt(Instant.now());
dmpUserEntity.setIsActive(IsActive.Active);
} }
data.setLabel(model.getLabel()); data.setLabel(model.getLabel());
data.setLanguage(model.getLanguage());
data.setProperties(this.jsonHandlingService.toJson(this.buildDmpPropertiesEntity(model.getProperties()))); data.setProperties(this.jsonHandlingService.toJson(this.buildDmpPropertiesEntity(model.getProperties())));
data.setDescription(model.getDescription()); data.setDescription(model.getDescription());
data.setAccessType(model.getAccessType()); data.setAccessType(model.getAccessType());
@ -572,7 +587,6 @@ public class DmpServiceImpl implements DmpService {
this.entityManager.merge(data); this.entityManager.merge(data);
else { else {
this.entityManager.persist(data); this.entityManager.persist(data);
this.entityManager.persist(dmpUserEntity);
} }
this.entityManager.flush(); this.entityManager.flush();
@ -796,6 +810,7 @@ public class DmpServiceImpl implements DmpService {
throw new InvalidApplicationException("Dmp does not exist!"); throw new InvalidApplicationException("Dmp does not exist!");
} }
List<DmpUserPersist> usersToAssign = new ArrayList<>();
for (DmpUserPersist user :users) { for (DmpUserPersist user :users) {
UUID userId = null; UUID userId = null;
if (user.getUser() != null){ if (user.getUser() != null){
@ -808,7 +823,7 @@ public class DmpServiceImpl implements DmpService {
} }
if (userId != null){ if (userId != null){
user.setUser(userId); user.setUser(userId);
this.assignUsers(id, List.of(user), null); usersToAssign.add(user);
if (this.userScope.getUserId() != userId){ if (this.userScope.getUserId() != userId){
this.sendDmpInvitationExistingUser(user.getUser(), dmp, user.getRole()); this.sendDmpInvitationExistingUser(user.getUser(), dmp, user.getRole());
} }
@ -817,6 +832,7 @@ public class DmpServiceImpl implements DmpService {
} }
} }
if(!usersToAssign.isEmpty()) this.assignUsers(id, usersToAssign, null);
} }
private void sendDmpInvitationExistingUser(UUID userId, DmpEntity dmp, DmpUserRole role) throws InvalidApplicationException { private void sendDmpInvitationExistingUser(UUID userId, DmpEntity dmp, DmpUserRole role) throws InvalidApplicationException {
@ -900,10 +916,17 @@ public class DmpServiceImpl implements DmpService {
} }
DmpInvitationEntity dmpInvitation = this.xmlHandlingService.fromXmlSafe(DmpInvitationEntity.class, action.getData()); DmpInvitationEntity dmpInvitation = this.xmlHandlingService.fromXmlSafe(DmpInvitationEntity.class, action.getData());
DmpUserPersist model = new DmpUserPersist();
model.setUser(this.userScope.getUserIdSafe()); DmpUserEntity data = new DmpUserEntity();
model.setRole(dmpInvitation.getRole()); data.setId(UUID.randomUUID());
this.assignUsers(dmpInvitation.getDmpId(), List.of(model), null); data.setIsActive(IsActive.Active);
data.setCreatedAt(Instant.now());
data.setUpdatedAt(Instant.now());
data.setRole(dmpInvitation.getRole());
data.setUserId(this.userScope.getUserIdSafe());
data.setDmpId(dmpInvitation.getDmpId());
this.entityManager.persist(data);
action.setStatus(ActionConfirmationStatus.Accepted); action.setStatus(ActionConfirmationStatus.Accepted);
this.entityManager.merge(action); this.entityManager.merge(action);
} }

View File

@ -159,7 +159,7 @@ public class DmpBlueprintServiceImpl implements DmpBlueprintService {
this.entityManager.flush(); this.entityManager.flush();
return this.builderFactory.builder(DmpBlueprintBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).build(BaseFieldSet.build(fields, DmpBlueprint._id), data); return this.builderFactory.builder(DmpBlueprintBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission).build(BaseFieldSet.build(fields, DmpBlueprint._id), data);
} }
private void updateVersionStatusAndSave(DmpBlueprintEntity data, DmpBlueprintStatus previousStatus, DmpBlueprintStatus newStatus) { private void updateVersionStatusAndSave(DmpBlueprintEntity data, DmpBlueprintStatus previousStatus, DmpBlueprintStatus newStatus) {
@ -336,8 +336,8 @@ public class DmpBlueprintServiceImpl implements DmpBlueprintService {
this.authorizationService.authorizeForce(Permission.CloneDmpBlueprint); this.authorizationService.authorizeForce(Permission.CloneDmpBlueprint);
DmpBlueprintQuery query = this.queryFactory.query(DmpBlueprintQuery.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).ids(id); DmpBlueprintQuery query = this.queryFactory.query(DmpBlueprintQuery.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission).ids(id);
DmpBlueprint model = this.builderFactory.builder(DmpBlueprintBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).build(fields, query.firstAs(fields)); DmpBlueprint model = this.builderFactory.builder(DmpBlueprintBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission).build(fields, query.firstAs(fields));
if (model == null) if (model == null)
throw new MyNotFoundException(messageSource.getMessage("General_ItemNotFound", new Object[]{id, DmpBlueprint.class.getSimpleName()}, LocaleContextHolder.getLocale())); throw new MyNotFoundException(messageSource.getMessage("General_ItemNotFound", new Object[]{id, DmpBlueprint.class.getSimpleName()}, LocaleContextHolder.getLocale()));
@ -435,7 +435,7 @@ public class DmpBlueprintServiceImpl implements DmpBlueprintService {
this.entityManager.flush(); this.entityManager.flush();
return this.builderFactory.builder(DmpBlueprintBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).build(BaseFieldSet.build(fields, DmpBlueprint._id), data); return this.builderFactory.builder(DmpBlueprintBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission).build(BaseFieldSet.build(fields, DmpBlueprint._id), data);
} }
//endregion //endregion

View File

@ -109,7 +109,7 @@ public class EntityDoiServiceImpl implements EntityDoiService {
this.entityManager.flush(); this.entityManager.flush();
this.eventBroker.emit(new EntityDoiTouchedEvent(data.getId())); this.eventBroker.emit(new EntityDoiTouchedEvent(data.getId()));
return this.builderFactory.builder(EntityDoiBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).build(BaseFieldSet.build(fields, EntityDoi._id), data); return this.builderFactory.builder(EntityDoiBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission).build(BaseFieldSet.build(fields, EntityDoi._id), data);
} }
public void deleteAndSave(UUID id) throws MyForbiddenException, InvalidApplicationException { public void deleteAndSave(UUID id) throws MyForbiddenException, InvalidApplicationException {

View File

@ -25,16 +25,13 @@ import gr.cite.tools.logging.LoggerService;
import gr.cite.tools.logging.MapLogEntry; import gr.cite.tools.logging.MapLogEntry;
import jakarta.persistence.EntityManager; import jakarta.persistence.EntityManager;
import org.hibernate.FlushMode; import org.hibernate.FlushMode;
import org.hibernate.annotations.FlushModeType;
import org.slf4j.LoggerFactory; import org.slf4j.LoggerFactory;
import org.springframework.context.MessageSource; import org.springframework.context.MessageSource;
import org.springframework.context.i18n.LocaleContextHolder; import org.springframework.context.i18n.LocaleContextHolder;
import org.springframework.stereotype.Service; import org.springframework.stereotype.Service;
import javax.management.InvalidApplicationException; import javax.management.InvalidApplicationException;
import java.io.FileInputStream;
import java.io.IOException; import java.io.IOException;
import java.io.InputStream;
import java.nio.charset.StandardCharsets; import java.nio.charset.StandardCharsets;
import java.time.Instant; import java.time.Instant;
import java.util.List; import java.util.List;
@ -99,7 +96,7 @@ public class LanguageServiceImpl implements LanguageService {
// //
// this.entityManager.flush(); // this.entityManager.flush();
return this.builderFactory.builder(LanguageBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).build(BaseFieldSet.build(fields, Language._id), data); return this.builderFactory.builder(LanguageBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission).build(BaseFieldSet.build(fields, Language._id), data);
} }
public String getPayload(String code) throws IOException { public String getPayload(String code) throws IOException {

View File

@ -11,7 +11,6 @@ import eu.eudat.model.builder.LockBuilder;
import eu.eudat.model.deleter.LockDeleter; import eu.eudat.model.deleter.LockDeleter;
import eu.eudat.model.persist.LockPersist; import eu.eudat.model.persist.LockPersist;
import eu.eudat.query.LockQuery; import eu.eudat.query.LockQuery;
import eu.eudat.query.lookup.LockLookup;
import gr.cite.commons.web.authz.service.AuthorizationService; import gr.cite.commons.web.authz.service.AuthorizationService;
import gr.cite.tools.data.builder.BuilderFactory; import gr.cite.tools.data.builder.BuilderFactory;
import gr.cite.tools.data.deleter.DeleterFactory; import gr.cite.tools.data.deleter.DeleterFactory;
@ -104,11 +103,11 @@ public class LockServiceImpl implements LockService {
this.entityManager.flush(); this.entityManager.flush();
return this.builderFactory.builder(LockBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).build(BaseFieldSet.build(fields, Lock._id), data); return this.builderFactory.builder(LockBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission).build(BaseFieldSet.build(fields, Lock._id), data);
} }
public boolean isLocked(UUID target) throws InvalidApplicationException { public boolean isLocked(UUID target) throws InvalidApplicationException {
LockQuery query = this.queryFactory.query(LockQuery.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).targetIds(target); LockQuery query = this.queryFactory.query(LockQuery.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission).targetIds(target);
if (query.count() == 1) { if (query.count() == 1) {
LockEntity lock = query.first(); LockEntity lock = query.first();
if (lock.getLockedBy().equals(this.userScope.getUserId())) { if (lock.getLockedBy().equals(this.userScope.getUserId())) {
@ -128,7 +127,7 @@ public class LockServiceImpl implements LockService {
private Long forceUnlock(UUID target) throws InvalidApplicationException { private Long forceUnlock(UUID target) throws InvalidApplicationException {
LockQuery query = this.queryFactory.query(LockQuery.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).targetIds(target); LockQuery query = this.queryFactory.query(LockQuery.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission).targetIds(target);
Long availableLocks = query.count(); Long availableLocks = query.count();
long deletedLocks = 0L; long deletedLocks = 0L;
if (availableLocks > 0) { if (availableLocks > 0) {
@ -154,7 +153,7 @@ public class LockServiceImpl implements LockService {
public void unlock(UUID target) throws InvalidApplicationException { public void unlock(UUID target) throws InvalidApplicationException {
LockQuery query = this.queryFactory.query(LockQuery.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).targetIds(target); LockQuery query = this.queryFactory.query(LockQuery.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission).targetIds(target);
if (query.count() == 1) { if (query.count() == 1) {
LockEntity lock = query.first(); LockEntity lock = query.first();
if (!lock.getLockedBy().equals(this.userScope.getUserId())) { if (!lock.getLockedBy().equals(this.userScope.getUserId())) {

View File

@ -144,7 +144,7 @@ public class PrefillingSourceServiceImpl implements PrefillingSourceService {
this.entityManager.flush(); this.entityManager.flush();
return this.builderFactory.builder(PrefillingSourceBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).build(BaseFieldSet.build(fields, PrefillingSource._id), data); return this.builderFactory.builder(PrefillingSourceBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission).build(BaseFieldSet.build(fields, PrefillingSource._id), data);
} }
private @NotNull PrefillingSourceDefinitionEntity buildDefinitionEntity(PrefillingSourceDefinitionPersist persist) { private @NotNull PrefillingSourceDefinitionEntity buildDefinitionEntity(PrefillingSourceDefinitionPersist persist) {
@ -361,7 +361,7 @@ public class PrefillingSourceServiceImpl implements PrefillingSourceService {
eu.eudat.commons.types.descriptiontemplate.DefinitionEntity descriptionTemplateDefinition = this.xmlHandlingService.fromXml(eu.eudat.commons.types.descriptiontemplate.DefinitionEntity.class, descriptionTemplateEntity.getDefinition()); eu.eudat.commons.types.descriptiontemplate.DefinitionEntity descriptionTemplateDefinition = this.xmlHandlingService.fromXml(eu.eudat.commons.types.descriptiontemplate.DefinitionEntity.class, descriptionTemplateEntity.getDefinition());
Description description = new Description(); Description description = new Description();
description.setDescriptionTemplate(this.builderFactory.builder(DescriptionTemplateBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).build(fieldSet, descriptionTemplateEntity)); description.setDescriptionTemplate(this.builderFactory.builder(DescriptionTemplateBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission).build(fieldSet, descriptionTemplateEntity));
return mapPrefilledEntityToDescription(description, descriptionTemplateDefinition, prefillingSourceDefinition, prefillingSourceEntity.getLabel(), externalData.getResults().getFirst());//TODO return mapPrefilledEntityToDescription(description, descriptionTemplateDefinition, prefillingSourceDefinition, prefillingSourceEntity.getLabel(), externalData.getResults().getFirst());//TODO
} }

View File

@ -122,7 +122,7 @@ public class ReferenceServiceImpl implements ReferenceService {
this.entityManager.flush(); this.entityManager.flush();
return this.builderFactory.builder(ReferenceBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).build(BaseFieldSet.build(fields, Reference._id), data); return this.builderFactory.builder(ReferenceBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission).build(BaseFieldSet.build(fields, Reference._id), data);
} }
private @NotNull DefinitionEntity buildDefinitionEntity(DefinitionPersist persist){ private @NotNull DefinitionEntity buildDefinitionEntity(DefinitionPersist persist){
@ -187,7 +187,7 @@ public class ReferenceServiceImpl implements ReferenceService {
ReferenceEntity referenceEntity = buildReferenceEntityFromExternalData(result, data); ReferenceEntity referenceEntity = buildReferenceEntityFromExternalData(result, data);
referenceEntities.add(referenceEntity); referenceEntities.add(referenceEntity);
} }
externalModels = this.builderFactory.builder(ReferenceBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).build(lookup.getProject(), referenceEntities); externalModels = this.builderFactory.builder(ReferenceBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission).build(lookup.getProject(), referenceEntities);
} }
List<Reference> models = this.fetchReferenceFromDb(lookup); List<Reference> models = this.fetchReferenceFromDb(lookup);
@ -236,10 +236,10 @@ public class ReferenceServiceImpl implements ReferenceService {
} }
private List<Reference> fetchReferenceFromDb(ReferenceSearchLookup lookup){ private List<Reference> fetchReferenceFromDb(ReferenceSearchLookup lookup){
ReferenceQuery query = lookup.enrich(this.queryFactory).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).sourceTypes(ReferenceSourceType.Internal).typeIds(lookup.getTypeId()); ReferenceQuery query = lookup.enrich(this.queryFactory).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission).sourceTypes(ReferenceSourceType.Internal).typeIds(lookup.getTypeId());
List<ReferenceEntity> data = query.collectAs(lookup.getProject()); List<ReferenceEntity> data = query.collectAs(lookup.getProject());
return this.builderFactory.builder(ReferenceBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).build(lookup.getProject(), data); return this.builderFactory.builder(ReferenceBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission).build(lookup.getProject(), data);
} }
private ExternalDataResult getReferenceData(ReferenceTypeEntity referenceType, ExternalReferenceCriteria externalReferenceCriteria, String key) { private ExternalDataResult getReferenceData(ReferenceTypeEntity referenceType, ExternalReferenceCriteria externalReferenceCriteria, String key) {

View File

@ -102,7 +102,7 @@ public class ReferenceTypeServiceImpl implements ReferenceTypeService {
this.entityManager.flush(); this.entityManager.flush();
return this.builderFactory.builder(ReferenceTypeBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).build(BaseFieldSet.build(fields, ReferenceType._id), data); return this.builderFactory.builder(ReferenceTypeBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission).build(BaseFieldSet.build(fields, ReferenceType._id), data);
} }
private @NotNull ReferenceTypeDefinitionEntity buildDefinitionEntity(ReferenceTypeDefinitionPersist persist){ private @NotNull ReferenceTypeDefinitionEntity buildDefinitionEntity(ReferenceTypeDefinitionPersist persist){

View File

@ -197,19 +197,7 @@ public class StorageFileProperties {
} }
public static class StaticFilesConfig{ public static class StaticFilesConfig{
private String externalUrls;
private String semantics; private String semantics;
private String h2020Template;
private String h2020DescriptionTemplate;
private String pidLinks;
public String getExternalUrls() {
return externalUrls;
}
public void setExternalUrls(String externalUrls) {
this.externalUrls = externalUrls;
}
public String getSemantics() { public String getSemantics() {
return semantics; return semantics;
@ -219,29 +207,6 @@ public class StorageFileProperties {
this.semantics = semantics; this.semantics = semantics;
} }
public String getH2020Template() {
return h2020Template;
}
public void setH2020Template(String h2020Template) {
this.h2020Template = h2020Template;
}
public String getH2020DescriptionTemplate() {
return h2020DescriptionTemplate;
}
public void setH2020DescriptionTemplate(String h2020DescriptionTemplate) {
this.h2020DescriptionTemplate = h2020DescriptionTemplate;
}
public String getPidLinks() {
return pidLinks;
}
public void setPidLinks(String pidLinks) {
this.pidLinks = pidLinks;
}
} }
} }

View File

@ -33,12 +33,6 @@ public interface StorageFileService extends ApplicationListener<ApplicationReady
byte[] getSemanticsFile(); byte[] getSemanticsFile();
byte[] getPidLinksFile();
byte[] getH2020TemplateFile();
byte[] getH2020DescriptionTemplateFile();
byte[] getSupportiveMaterial(SupportiveMaterialFieldType type, String language); byte[] getSupportiveMaterial(SupportiveMaterialFieldType type, String language);
byte[] getUserGuide(String language); byte[] getUserGuide(String language);

View File

@ -7,7 +7,6 @@ import eu.eudat.commons.enums.StorageType;
import eu.eudat.commons.enums.SupportiveMaterialFieldType; import eu.eudat.commons.enums.SupportiveMaterialFieldType;
import eu.eudat.commons.scope.user.UserScope; import eu.eudat.commons.scope.user.UserScope;
import eu.eudat.data.StorageFileEntity; import eu.eudat.data.StorageFileEntity;
import eu.eudat.model.Description;
import eu.eudat.model.StorageFile; import eu.eudat.model.StorageFile;
import eu.eudat.model.builder.StorageFileBuilder; import eu.eudat.model.builder.StorageFileBuilder;
import eu.eudat.model.persist.StorageFilePersist; import eu.eudat.model.persist.StorageFilePersist;
@ -94,7 +93,7 @@ public class StorageFileServiceImpl implements StorageFileService {
this.entityManager.persist(storageFile); this.entityManager.persist(storageFile);
this.entityManager.flush(); this.entityManager.flush();
return this.builderFactory.builder(StorageFileBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).build(BaseFieldSet.build(fields, StorageFile._id), storageFile); return this.builderFactory.builder(StorageFileBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission).build(BaseFieldSet.build(fields, StorageFile._id), storageFile);
} }
@Override @Override
@ -142,7 +141,7 @@ public class StorageFileServiceImpl implements StorageFileService {
file.delete(); file.delete();
this.entityManager.merge(storageFile); this.entityManager.merge(storageFile);
return this.builderFactory.builder(StorageFileBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).build(BaseFieldSet.build(fields, StorageFile._id), storageFile); return this.builderFactory.builder(StorageFileBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission).build(BaseFieldSet.build(fields, StorageFile._id), storageFile);
} }
catch (Exception ex) { catch (Exception ex) {
logger.warn("problem reading byte content of storage file " + fileId, ex); logger.warn("problem reading byte content of storage file " + fileId, ex);
@ -181,7 +180,7 @@ public class StorageFileServiceImpl implements StorageFileService {
this.entityManager.persist(data); this.entityManager.persist(data);
this.entityManager.merge(storageFile); this.entityManager.merge(storageFile);
return this.builderFactory.builder(StorageFileBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).build(BaseFieldSet.build(fields, StorageFile._id), storageFile); return this.builderFactory.builder(StorageFileBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission).build(BaseFieldSet.build(fields, StorageFile._id), storageFile);
} }
catch (Exception ex) { catch (Exception ex) {
@ -334,38 +333,7 @@ public class StorageFileServiceImpl implements StorageFileService {
} }
@Override
public byte[] getPidLinksFile() {
try {
return this.readFileBytes(this.config.getStaticFiles().getPidLinks());
}
catch (Exception ex) {
logger.warn("problem reading PidLinks file", ex);
return null;
}
}
@Override
public byte[] getH2020TemplateFile() {
try {
return this.readFileBytes(this.config.getStaticFiles().getH2020Template());
}
catch (Exception ex) {
logger.warn("problem reading H2020Template file", ex);
return null;
}
}
@Override
public byte[] getH2020DescriptionTemplateFile() {
try {
return this.readFileBytes(this.config.getStaticFiles().getH2020DescriptionTemplate());
}
catch (Exception ex) {
logger.warn("problem reading H2020DescriptionTemplate file", ex);
return null;
}
}
//endregion //endregion
//region materials //region materials

View File

@ -30,21 +30,12 @@ import jakarta.xml.bind.JAXBException;
import org.slf4j.LoggerFactory; import org.slf4j.LoggerFactory;
import org.springframework.context.MessageSource; import org.springframework.context.MessageSource;
import org.springframework.context.i18n.LocaleContextHolder; import org.springframework.context.i18n.LocaleContextHolder;
import org.springframework.http.HttpHeaders;
import org.springframework.http.HttpStatus;
import org.springframework.http.MediaType;
import org.springframework.http.ResponseEntity;
import org.springframework.stereotype.Service; import org.springframework.stereotype.Service;
import javax.management.InvalidApplicationException; import javax.management.InvalidApplicationException;
import java.io.*;
import java.nio.file.Files;
import java.nio.file.Path;
import java.time.Instant; import java.time.Instant;
import java.util.List; import java.util.List;
import java.util.UUID; import java.util.UUID;
import java.util.stream.Collectors;
import java.util.stream.Stream;
@Service @Service
@ -104,7 +95,7 @@ public class SupportiveMaterialServiceImpl implements SupportiveMaterialService{
if (d == null) if (d == null)
throw new MyNotFoundException(messageSource.getMessage("General_ItemNotFound", new Object[]{model.getId(), SupportiveMaterial.class.getSimpleName()}, LocaleContextHolder.getLocale())); throw new MyNotFoundException(messageSource.getMessage("General_ItemNotFound", new Object[]{model.getId(), SupportiveMaterial.class.getSimpleName()}, LocaleContextHolder.getLocale()));
} else { } else {
List<SupportiveMaterialEntity> data = this.queryFactory.query(SupportiveMaterialQuery.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).languageCodes(model.getLanguageCode()).types(model.getType()).collect(); List<SupportiveMaterialEntity> data = this.queryFactory.query(SupportiveMaterialQuery.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission).languageCodes(model.getLanguageCode()).types(model.getType()).collect();
if(data != null && !data.isEmpty()){ if(data != null && !data.isEmpty()){
throw new MyApplicationException("Could not create a new Data with same type and lang code !"); throw new MyApplicationException("Could not create a new Data with same type and lang code !");
@ -126,7 +117,7 @@ public class SupportiveMaterialServiceImpl implements SupportiveMaterialService{
this.entityManager.flush(); this.entityManager.flush();
return this.builderFactory.builder(SupportiveMaterialBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).build(BaseFieldSet.build(fields, SupportiveMaterial._id), d); return this.builderFactory.builder(SupportiveMaterialBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission).build(BaseFieldSet.build(fields, SupportiveMaterial._id), d);
} }
public void deleteAndSave(UUID id) throws MyForbiddenException, InvalidApplicationException { public void deleteAndSave(UUID id) throws MyForbiddenException, InvalidApplicationException {

View File

@ -112,7 +112,7 @@ public class TagServiceImpl implements TagService {
this.entityManager.flush(); this.entityManager.flush();
this.eventBroker.emit(new TagTouchedEvent(data.getId())); this.eventBroker.emit(new TagTouchedEvent(data.getId()));
return this.builderFactory.builder(TagBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).build(BaseFieldSet.build(fields, Tag._id), data); return this.builderFactory.builder(TagBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission).build(BaseFieldSet.build(fields, Tag._id), data);
} }
public void deleteAndSave(UUID id) throws MyForbiddenException, InvalidApplicationException { public void deleteAndSave(UUID id) throws MyForbiddenException, InvalidApplicationException {

View File

@ -130,7 +130,7 @@ public class TenantServiceImpl implements TenantService {
this.entityManager.flush(); this.entityManager.flush();
return this.builderFactory.builder(TenantBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).build(BaseFieldSet.build(fields, Tenant._id), data); return this.builderFactory.builder(TenantBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission).build(BaseFieldSet.build(fields, Tenant._id), data);
} }
private @NotNull TenantConfigEntity buildConfigEntity(TenantConfigPersist persist) throws InvalidAlgorithmParameterException, NoSuchPaddingException, IllegalBlockSizeException, NoSuchAlgorithmException, BadPaddingException, InvalidKeyException { private @NotNull TenantConfigEntity buildConfigEntity(TenantConfigPersist persist) throws InvalidAlgorithmParameterException, NoSuchPaddingException, IllegalBlockSizeException, NoSuchAlgorithmException, BadPaddingException, InvalidKeyException {

View File

@ -1,177 +1,14 @@
package eu.eudat.service.transformer; package eu.eudat.service.transformer;
import eu.eudat.authorization.AuthorizationFlags;
import eu.eudat.authorization.Permission;
import eu.eudat.cache.transformer.FileTransformerConfigurationCache;
import eu.eudat.commonmodels.models.FileEnvelopeModel;
import eu.eudat.commonmodels.models.description.DescriptionModel;
import eu.eudat.commonmodels.models.dmp.DmpModel;
import eu.eudat.commons.enums.StorageType;
import eu.eudat.configurations.transformer.TransformerProperties;
import eu.eudat.file.transformer.interfaces.FileTransformerConfiguration;
import eu.eudat.file.transformer.models.misc.FileFormat; import eu.eudat.file.transformer.models.misc.FileFormat;
import eu.eudat.model.Description;
import eu.eudat.model.Dmp;
import eu.eudat.model.builder.commonmodels.description.DescriptionCommonModelBuilder;
import eu.eudat.model.builder.commonmodels.dmp.DmpCommonModelBuilder;
import eu.eudat.model.file.TransformerCacheModel;
import eu.eudat.query.DescriptionQuery;
import eu.eudat.query.DmpQuery;
import eu.eudat.repository.TransformerRepository;
import eu.eudat.service.storage.StorageFileService;
import gr.cite.commons.web.authz.service.AuthorizationService;
import gr.cite.commons.web.oidc.filter.webflux.TokenExchangeCacheService;
import gr.cite.commons.web.oidc.filter.webflux.TokenExchangeFilterFunction;
import gr.cite.commons.web.oidc.filter.webflux.TokenExchangeModel;
import gr.cite.tools.data.builder.BuilderFactory;
import gr.cite.tools.data.query.QueryFactory;
import gr.cite.tools.exception.MyNotFoundException;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.context.MessageSource;
import org.springframework.context.i18n.LocaleContextHolder;
import org.springframework.stereotype.Service;
import org.springframework.web.reactive.function.client.ExchangeFilterFunction;
import org.springframework.web.reactive.function.client.WebClient;
import reactor.core.publisher.Mono;
import javax.management.InvalidApplicationException; import java.util.List;
import java.io.IOException; import java.util.UUID;
import java.net.URI;
import java.util.*;
@Service public interface FileTransformerService {
public class FileTransformerService { List<FileFormat> getAvailableExportFileFormats();
private static final Logger logger = LoggerFactory.getLogger(FileTransformerService.class);
private final TransformerProperties transformerProperties; eu.eudat.model.file.FileEnvelope exportDmp(UUID dmpId, String repositoryId, String format);
private final Map<String, TransformerRepository> clients;
private final TokenExchangeCacheService tokenExchangeCacheService;
private final FileTransformerConfigurationCache fileTransformerConfigurationCache;
private final AuthorizationService authorizationService;
private final WebClient.Builder webClientBuilder;
private final QueryFactory queryFactory;
private final BuilderFactory builderFactory;
private final StorageFileService storageFileService;
private final MessageSource messageSource;
@Autowired eu.eudat.model.file.FileEnvelope exportDescription(UUID descriptionId, String format);
public FileTransformerService(TransformerProperties transformerProperties, TokenExchangeCacheService tokenExchangeCacheService, FileTransformerConfigurationCache fileTransformerConfigurationCache, WebClient.Builder builder, AuthorizationService authorizationService,
QueryFactory queryFactory, BuilderFactory builderFactory, StorageFileService storageFileService, MessageSource messageSource) {
this.transformerProperties = transformerProperties;
this.tokenExchangeCacheService = tokenExchangeCacheService;
this.fileTransformerConfigurationCache = fileTransformerConfigurationCache;
this.authorizationService = authorizationService;
this.webClientBuilder = builder;
this.queryFactory = queryFactory;
this.builderFactory = builderFactory;
this.storageFileService = storageFileService;
this.messageSource = messageSource;
this.clients = new HashMap<>();
}
private TransformerRepository getRepository(String repoId) {
if (this.clients.containsKey(repoId)) return this.clients.get(repoId);
//GK: It's register time
TransformerProperties.TransformerSource source = transformerProperties.getSources().stream().filter(depositSource -> depositSource.getCodes().contains(repoId)).findFirst().orElse(null);
if (source != null) {
String host = URI.create(source.getUrl()).getHost();
TokenExchangeModel tokenExchangeModel = new TokenExchangeModel(host + "_" + source.getClientId(), source.getIssuerUrl(), source.getClientId(), source.getClientSecret(), source.getScope());
TokenExchangeFilterFunction tokenExchangeFilterFunction = new TokenExchangeFilterFunction(this.tokenExchangeCacheService, tokenExchangeModel);
TransformerRepository repository = new TransformerRepository(webClientBuilder.baseUrl(source.getUrl() + "/api/file-transformer").filters(exchangeFilterFunctions -> {
exchangeFilterFunctions.add(tokenExchangeFilterFunction);
exchangeFilterFunctions.add(logRequest());
}).build());
source.getCodes().forEach(code -> this.clients.put(code, repository));
return repository;
}
return null;
}
public List<FileFormat> getAvailableExportFileFormats() {
List<FileFormat> formats = new ArrayList<>();
List<FileTransformerConfiguration> configurations = this.getAvailableConfigurations();
if(configurations != null){
for (FileTransformerConfiguration configuration : configurations){
if (configuration != null && configuration.getExportVariants() != null) formats.addAll(configuration.getExportVariants());
}
}
return formats;
}
private List<FileTransformerConfiguration> getAvailableConfigurations() {
TransformerCacheModel configs = fileTransformerConfigurationCache.lookup("base");
if (configs == null) {
List<FileTransformerConfiguration> configurations = new ArrayList<>();
//GK: So much for lazy loading
List<TransformerRepository> repositories = transformerProperties.getSources().stream().map(depositSource -> getRepository(depositSource.getCodes().getFirst())).toList();
repositories = new ArrayList<>(repositories);
repositories.forEach((client) -> {
try {
FileTransformerConfiguration repositoryConfig = client.getConfiguration();
if (repositoryConfig != null) {
configurations.add(repositoryConfig);
}
} catch (Exception e) {
logger.warn(e.getLocalizedMessage(), e);
}
});
configs = new TransformerCacheModel(configurations);
this.fileTransformerConfigurationCache.put("base", configs);
}
return configs.getConfigurations();
}
public eu.eudat.model.file.FileEnvelope exportDmp(UUID dmpId, String format) throws InvalidApplicationException, IOException {
this.authorizationService.authorize(Permission.EditDmp);
//GK: First get the right client
TransformerRepository repository = getRepository(format);
if (repository == null) throw new MyNotFoundException(messageSource.getMessage("General_ItemNotFound", new Object[]{format, TransformerRepository.class.getSimpleName()}, LocaleContextHolder.getLocale()));
//GK: Second get the Target Data Management Plan
DmpQuery query = this.queryFactory.query(DmpQuery.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).ids(dmpId);
DmpModel dmpFileTransformerModel = this.builderFactory.builder(DmpCommonModelBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).build(query.first());
if (dmpFileTransformerModel == null) throw new MyNotFoundException(messageSource.getMessage("General_ItemNotFound", new Object[]{dmpId, Dmp.class.getSimpleName()}, LocaleContextHolder.getLocale()));
FileEnvelopeModel fileEnvelope = repository.exportDmp(dmpFileTransformerModel, format);
eu.eudat.model.file.FileEnvelope result = new eu.eudat.model.file.FileEnvelope();
byte[] data = repository.getConfiguration().isUseSharedStorage() ? storageFileService.readByFileRefAsBytesSafe(fileEnvelope.getFileRef(), StorageType.Transformer) : fileEnvelope.getFile();
result.setFile(data);
result.setFilename(fileEnvelope.getFilename());
return result;
}
public eu.eudat.model.file.FileEnvelope exportDescription(UUID descriptionId, String format) {
this.authorizationService.authorize(Permission.EditDmp);
//GK: First get the right client
TransformerRepository repository = getRepository(format);
if (repository == null) throw new MyNotFoundException(messageSource.getMessage("General_ItemNotFound", new Object[]{format, TransformerRepository.class.getSimpleName()}, LocaleContextHolder.getLocale()));
//GK: Second get the Target Data Management Plan
DescriptionQuery query = this.queryFactory.query(DescriptionQuery.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).ids(descriptionId);
DescriptionModel descriptionFileTransformerModel = this.builderFactory.builder(DescriptionCommonModelBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).build(query.first());
if (descriptionFileTransformerModel == null) throw new MyNotFoundException(messageSource.getMessage("General_ItemNotFound", new Object[]{descriptionId, Description.class.getSimpleName()}, LocaleContextHolder.getLocale()));
FileEnvelopeModel fileEnvelope = repository.exportDescription(descriptionFileTransformerModel, format);
eu.eudat.model.file.FileEnvelope result = new eu.eudat.model.file.FileEnvelope();
byte[] data = repository.getConfiguration().isUseSharedStorage() ? storageFileService.readByFileRefAsBytesSafe(fileEnvelope.getFileRef(), StorageType.Transformer) : fileEnvelope.getFile(); //TODO: shared storage should be per repository
result.setFile(data);
result.setFilename(fileEnvelope.getFilename());
return result;
}
// This method returns filter function which will log request data
private static ExchangeFilterFunction logRequest() {
return ExchangeFilterFunction.ofRequestProcessor(clientRequest -> {
logger.info("Request: {} {}", clientRequest.method(), clientRequest.url());
clientRequest.headers().forEach((name, values) -> values.forEach(value -> logger.info("{}={}", name, value)));
return Mono.just(clientRequest);
});
}
} }

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@ -0,0 +1,178 @@
package eu.eudat.service.transformer;
import eu.eudat.authorization.AuthorizationFlags;
import eu.eudat.authorization.Permission;
import eu.eudat.cache.transformer.FileTransformerConfigurationCache;
import eu.eudat.commonmodels.models.FileEnvelopeModel;
import eu.eudat.commonmodels.models.description.DescriptionModel;
import eu.eudat.commonmodels.models.dmp.DmpModel;
import eu.eudat.commons.enums.StorageType;
import eu.eudat.configurations.transformer.TransformerProperties;
import eu.eudat.file.transformer.interfaces.FileTransformerConfiguration;
import eu.eudat.file.transformer.models.misc.FileFormat;
import eu.eudat.model.Description;
import eu.eudat.model.Dmp;
import eu.eudat.model.builder.commonmodels.description.DescriptionCommonModelBuilder;
import eu.eudat.model.builder.commonmodels.dmp.DmpCommonModelBuilder;
import eu.eudat.model.file.TransformerCacheModel;
import eu.eudat.query.DescriptionQuery;
import eu.eudat.query.DmpQuery;
import eu.eudat.repository.TransformerRepository;
import eu.eudat.service.storage.StorageFileService;
import gr.cite.commons.web.authz.service.AuthorizationService;
import gr.cite.commons.web.oidc.filter.webflux.TokenExchangeCacheService;
import gr.cite.commons.web.oidc.filter.webflux.TokenExchangeFilterFunction;
import gr.cite.commons.web.oidc.filter.webflux.TokenExchangeModel;
import gr.cite.tools.data.builder.BuilderFactory;
import gr.cite.tools.data.query.QueryFactory;
import gr.cite.tools.exception.MyNotFoundException;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.context.MessageSource;
import org.springframework.context.i18n.LocaleContextHolder;
import org.springframework.stereotype.Service;
import org.springframework.web.reactive.function.client.ExchangeFilterFunction;
import org.springframework.web.reactive.function.client.WebClient;
import reactor.core.publisher.Mono;
import java.net.URI;
import java.util.*;
@Service
public class FileTransformerServiceImpl implements FileTransformerService {
private static final Logger logger = LoggerFactory.getLogger(FileTransformerServiceImpl.class);
private final TransformerProperties transformerProperties;
private final Map<String, TransformerRepository> clients;
private final TokenExchangeCacheService tokenExchangeCacheService;
private final FileTransformerConfigurationCache fileTransformerConfigurationCache;
private final AuthorizationService authorizationService;
private final WebClient.Builder webClientBuilder;
private final QueryFactory queryFactory;
private final BuilderFactory builderFactory;
private final StorageFileService storageFileService;
private final MessageSource messageSource;
@Autowired
public FileTransformerServiceImpl(TransformerProperties transformerProperties, TokenExchangeCacheService tokenExchangeCacheService, FileTransformerConfigurationCache fileTransformerConfigurationCache, WebClient.Builder builder, AuthorizationService authorizationService,
QueryFactory queryFactory, BuilderFactory builderFactory, StorageFileService storageFileService, MessageSource messageSource) {
this.transformerProperties = transformerProperties;
this.tokenExchangeCacheService = tokenExchangeCacheService;
this.fileTransformerConfigurationCache = fileTransformerConfigurationCache;
this.authorizationService = authorizationService;
this.webClientBuilder = builder;
this.queryFactory = queryFactory;
this.builderFactory = builderFactory;
this.storageFileService = storageFileService;
this.messageSource = messageSource;
this.clients = new HashMap<>();
}
private TransformerRepository getRepository(String repoId) {
if (this.clients.containsKey(repoId)) return this.clients.get(repoId);
//GK: It's register time
TransformerProperties.TransformerSource source = transformerProperties.getSources().stream().filter(depositSource -> depositSource.getCodes().contains(repoId)).findFirst().orElse(null);
if (source != null) {
String host = URI.create(source.getUrl()).getHost();
TokenExchangeModel tokenExchangeModel = new TokenExchangeModel(host + "_" + source.getClientId(), source.getIssuerUrl(), source.getClientId(), source.getClientSecret(), source.getScope());
TokenExchangeFilterFunction tokenExchangeFilterFunction = new TokenExchangeFilterFunction(this.tokenExchangeCacheService, tokenExchangeModel);
TransformerRepository repository = new TransformerRepository(webClientBuilder.baseUrl(source.getUrl() + "/api/file-transformer").filters(exchangeFilterFunctions -> {
exchangeFilterFunctions.add(tokenExchangeFilterFunction);
exchangeFilterFunctions.add(logRequest());
}).build());
source.getCodes().forEach(code -> this.clients.put(code, repository));
return repository;
}
return null;
}
@Override
public List<FileFormat> getAvailableExportFileFormats() {
List<FileFormat> formats = new ArrayList<>();
List<FileTransformerConfiguration> configurations = this.getAvailableConfigurations();
if(configurations != null){
for (FileTransformerConfiguration configuration : configurations){
if (configuration != null && configuration.getExportVariants() != null) formats.addAll(configuration.getExportVariants());
}
}
return formats;
}
private List<FileTransformerConfiguration> getAvailableConfigurations() {
TransformerCacheModel configs = fileTransformerConfigurationCache.lookup("base");
if (configs == null) {
List<FileTransformerConfiguration> configurations = new ArrayList<>();
//GK: So much for lazy loading
List<TransformerRepository> repositories = transformerProperties.getSources().stream().map(depositSource -> getRepository(depositSource.getCodes().getFirst())).toList();
repositories = new ArrayList<>(repositories);
repositories.forEach((client) -> {
try {
FileTransformerConfiguration repositoryConfig = client.getConfiguration();
if (repositoryConfig != null) {
configurations.add(repositoryConfig);
}
} catch (Exception e) {
logger.warn(e.getLocalizedMessage(), e);
}
});
configs = new TransformerCacheModel(configurations);
this.fileTransformerConfigurationCache.put("base", configs);
}
return configs.getConfigurations();
}
@Override
public eu.eudat.model.file.FileEnvelope exportDmp(UUID dmpId, String repositoryId, String format) {
this.authorizationService.authorize(Permission.EditDmp);
//GK: First get the right client
TransformerRepository repository = getRepository(repositoryId);
if (repository == null) throw new MyNotFoundException(messageSource.getMessage("General_ItemNotFound", new Object[]{repositoryId, TransformerRepository.class.getSimpleName()}, LocaleContextHolder.getLocale()));
//GK: Second get the Target Data Management Plan
DmpQuery query = this.queryFactory.query(DmpQuery.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission).ids(dmpId);
DmpModel dmpFileTransformerModel = this.builderFactory.builder(DmpCommonModelBuilder.class).useSharedStorage(repository.getConfiguration().isUseSharedStorage()).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission).build(query.first());
if (dmpFileTransformerModel == null) throw new MyNotFoundException(messageSource.getMessage("General_ItemNotFound", new Object[]{dmpId, Dmp.class.getSimpleName()}, LocaleContextHolder.getLocale()));
FileEnvelopeModel fileEnvelope = repository.exportDmp(dmpFileTransformerModel, format);
eu.eudat.model.file.FileEnvelope result = new eu.eudat.model.file.FileEnvelope();
byte[] data = repository.getConfiguration().isUseSharedStorage() ? storageFileService.readByFileRefAsBytesSafe(fileEnvelope.getFileRef(), StorageType.Transformer) : fileEnvelope.getFile();
result.setFile(data);
result.setFilename(fileEnvelope.getFilename());
return result;
}
@Override
public eu.eudat.model.file.FileEnvelope exportDescription(UUID descriptionId, String format) {
this.authorizationService.authorize(Permission.EditDmp);
//GK: First get the right client
TransformerRepository repository = getRepository(format);
if (repository == null) throw new MyNotFoundException(messageSource.getMessage("General_ItemNotFound", new Object[]{format, TransformerRepository.class.getSimpleName()}, LocaleContextHolder.getLocale()));
//GK: Second get the Target Data Management Plan
DescriptionQuery query = this.queryFactory.query(DescriptionQuery.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission).ids(descriptionId);
DescriptionModel descriptionFileTransformerModel = this.builderFactory.builder(DescriptionCommonModelBuilder.class).useSharedStorage(repository.getConfiguration().isUseSharedStorage()).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission).build(query.first());
if (descriptionFileTransformerModel == null) throw new MyNotFoundException(messageSource.getMessage("General_ItemNotFound", new Object[]{descriptionId, Description.class.getSimpleName()}, LocaleContextHolder.getLocale()));
FileEnvelopeModel fileEnvelope = repository.exportDescription(descriptionFileTransformerModel, format);
eu.eudat.model.file.FileEnvelope result = new eu.eudat.model.file.FileEnvelope();
byte[] data = repository.getConfiguration().isUseSharedStorage() ? storageFileService.readByFileRefAsBytesSafe(fileEnvelope.getFileRef(), StorageType.Transformer) : fileEnvelope.getFile(); //TODO: shared storage should be per repository
result.setFile(data);
result.setFilename(fileEnvelope.getFilename());
return result;
}
// This method returns filter function which will log request data
private static ExchangeFilterFunction logRequest() {
return ExchangeFilterFunction.ofRequestProcessor(clientRequest -> {
logger.info("Request: {} {}", clientRequest.method(), clientRequest.url());
clientRequest.headers().forEach((name, values) -> values.forEach(value -> logger.info("{}={}", name, value)));
return Mono.just(clientRequest);
});
}
}

View File

@ -178,7 +178,7 @@ public class UserServiceImpl implements UserService {
this.eventBroker.emit(new UserTouchedEvent(data.getId())); this.eventBroker.emit(new UserTouchedEvent(data.getId()));
this.userTouchedIntegrationEventHandler.handle(data.getId()); this.userTouchedIntegrationEventHandler.handle(data.getId());
return this.builderFactory.builder(UserBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).build(BaseFieldSet.build(fields, User._id), data); return this.builderFactory.builder(UserBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission).build(BaseFieldSet.build(fields, User._id), data);
} }
private @NotNull AdditionalInfoEntity buildAdditionalInfoEntity(UserAdditionalInfoPersist persist){ private @NotNull AdditionalInfoEntity buildAdditionalInfoEntity(UserAdditionalInfoPersist persist){
@ -276,7 +276,7 @@ public class UserServiceImpl implements UserService {
this.eventBroker.emit(new UserTouchedEvent(data.getId())); this.eventBroker.emit(new UserTouchedEvent(data.getId()));
this.userTouchedIntegrationEventHandler.handle(data.getId()); this.userTouchedIntegrationEventHandler.handle(data.getId());
return this.builderFactory.builder(UserBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).build(BaseFieldSet.build(fields, User._id), data); return this.builderFactory.builder(UserBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission).build(BaseFieldSet.build(fields, User._id), data);
} }
//region mine //region mine

View File

@ -96,7 +96,7 @@ public class UserSettingsServiceImpl implements UserSettingsService {
this.entityManager.flush(); this.entityManager.flush();
return this.builderFactory.builder(UserSettingsBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).build(BaseFieldSet.build(fields, UserSettings._id, UserSettings._key), data); return this.builderFactory.builder(UserSettingsBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission).build(BaseFieldSet.build(fields, UserSettings._id, UserSettings._key), data);
} }
} }

View File

@ -199,7 +199,7 @@
<dependency> <dependency>
<groupId>gr.cite.opendmp</groupId> <groupId>gr.cite.opendmp</groupId>
<artifactId>file-transformer-base</artifactId> <artifactId>file-transformer-base</artifactId>
<version>0.0.5</version> <version>0.0.6</version>
</dependency> </dependency>
</dependencies> </dependencies>

View File

@ -2,19 +2,15 @@ package eu.eudat.controllers;
import eu.eudat.audit.AuditableAction; import eu.eudat.audit.AuditableAction;
import eu.eudat.authorization.AuthorizationFlags; import eu.eudat.authorization.AuthorizationFlags;
import eu.eudat.authorization.Permission;
import eu.eudat.commons.enums.DmpAccessType; import eu.eudat.commons.enums.DmpAccessType;
import eu.eudat.commons.enums.DmpStatus; import eu.eudat.commons.enums.DmpStatus;
import eu.eudat.commons.enums.IsActive; import eu.eudat.commons.enums.IsActive;
import eu.eudat.commons.enums.StorageType;
import eu.eudat.convention.ConventionService; import eu.eudat.convention.ConventionService;
import eu.eudat.data.StorageFileEntity; import eu.eudat.data.StorageFileEntity;
import eu.eudat.model.StorageFile; import eu.eudat.model.StorageFile;
import eu.eudat.model.builder.PublicDescriptionBuilder; import eu.eudat.model.builder.PublicDescriptionBuilder;
import eu.eudat.model.persist.DescriptionFieldFilePersist; import eu.eudat.model.persist.DescriptionFieldFilePersist;
import eu.eudat.model.persist.StorageFilePersist;
import eu.eudat.service.storage.StorageFileService; import eu.eudat.service.storage.StorageFileService;
import gr.cite.tools.fieldset.BaseFieldSet;
import gr.cite.tools.validation.ValidationFilterAnnotation; import gr.cite.tools.validation.ValidationFilterAnnotation;
import eu.eudat.model.Description; import eu.eudat.model.Description;
import eu.eudat.model.Dmp; import eu.eudat.model.Dmp;
@ -40,7 +36,6 @@ import gr.cite.tools.exception.MyNotFoundException;
import gr.cite.tools.fieldset.FieldSet; import gr.cite.tools.fieldset.FieldSet;
import gr.cite.tools.logging.LoggerService; import gr.cite.tools.logging.LoggerService;
import gr.cite.tools.logging.MapLogEntry; import gr.cite.tools.logging.MapLogEntry;
import org.apache.commons.io.FilenameUtils;
import org.slf4j.LoggerFactory; import org.slf4j.LoggerFactory;
import org.springframework.context.MessageSource; import org.springframework.context.MessageSource;
import org.springframework.context.i18n.LocaleContextHolder; import org.springframework.context.i18n.LocaleContextHolder;
@ -54,8 +49,6 @@ import org.springframework.web.multipart.MultipartFile;
import javax.management.InvalidApplicationException; import javax.management.InvalidApplicationException;
import java.io.IOException; import java.io.IOException;
import java.net.URLConnection;
import java.time.Duration;
import java.util.*; import java.util.*;
import static eu.eudat.authorization.AuthorizationFlags.Public; import static eu.eudat.authorization.AuthorizationFlags.Public;
@ -138,7 +131,7 @@ public class DescriptionController {
this.censorFactory.censor(DescriptionCensor.class).censor(lookup.getProject(), null); this.censorFactory.censor(DescriptionCensor.class).censor(lookup.getProject(), null);
QueryResult<Description> queryResult = this.elasticQueryHelperService.collect(lookup, AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic, null); QueryResult<Description> queryResult = this.elasticQueryHelperService.collect(lookup, AuthorizationFlags.OwnerOrDmpAssociatedOrPermission, null);
this.auditService.track(AuditableAction.Description_Query, "lookup", lookup); this.auditService.track(AuditableAction.Description_Query, "lookup", lookup);
@ -152,8 +145,8 @@ public class DescriptionController {
this.censorFactory.censor(DescriptionCensor.class).censor(fieldSet, null); this.censorFactory.censor(DescriptionCensor.class).censor(fieldSet, null);
DescriptionQuery query = this.queryFactory.query(DescriptionQuery.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).ids(id); DescriptionQuery query = this.queryFactory.query(DescriptionQuery.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission).ids(id);
Description model = this.builderFactory.builder(DescriptionBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).build(fieldSet, query.firstAs(fieldSet)); Description model = this.builderFactory.builder(DescriptionBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission).build(fieldSet, query.firstAs(fieldSet));
if (model == null) if (model == null)
throw new MyNotFoundException(messageSource.getMessage("General_ItemNotFound", new Object[]{id, Dmp.class.getSimpleName()}, LocaleContextHolder.getLocale())); throw new MyNotFoundException(messageSource.getMessage("General_ItemNotFound", new Object[]{id, Dmp.class.getSimpleName()}, LocaleContextHolder.getLocale()));

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@ -85,10 +85,10 @@ public class DescriptionTemplateController {
this.censorFactory.censor(DescriptionTemplateCensor.class).censor(lookup.getProject(), null); this.censorFactory.censor(DescriptionTemplateCensor.class).censor(lookup.getProject(), null);
DescriptionTemplateQuery query = lookup.enrich(this.queryFactory).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic); DescriptionTemplateQuery query = lookup.enrich(this.queryFactory).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission);
List<DescriptionTemplateEntity> data = query.collectAs(lookup.getProject()); List<DescriptionTemplateEntity> data = query.collectAs(lookup.getProject());
List<DescriptionTemplate> models = this.builderFactory.builder(DescriptionTemplateBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).build(lookup.getProject(), data); List<DescriptionTemplate> models = this.builderFactory.builder(DescriptionTemplateBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission).build(lookup.getProject(), data);
long count = (lookup.getMetadata() != null && lookup.getMetadata().getCountAll()) ? query.count() : models.size(); long count = (lookup.getMetadata() != null && lookup.getMetadata().getCountAll()) ? query.count() : models.size();
this.auditService.track(AuditableAction.DescriptionTemplate_Query, "lookup", lookup); this.auditService.track(AuditableAction.DescriptionTemplate_Query, "lookup", lookup);
@ -102,8 +102,8 @@ public class DescriptionTemplateController {
this.censorFactory.censor(DescriptionTemplateCensor.class).censor(fieldSet, null); this.censorFactory.censor(DescriptionTemplateCensor.class).censor(fieldSet, null);
DescriptionTemplateQuery query = this.queryFactory.query(DescriptionTemplateQuery.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).ids(id); DescriptionTemplateQuery query = this.queryFactory.query(DescriptionTemplateQuery.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission).ids(id);
DescriptionTemplate model = this.builderFactory.builder(DescriptionTemplateBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).build(fieldSet, query.firstAs(fieldSet)); DescriptionTemplate model = this.builderFactory.builder(DescriptionTemplateBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission).build(fieldSet, query.firstAs(fieldSet));
if (model == null) if (model == null)
throw new MyNotFoundException(messageSource.getMessage("General_ItemNotFound", new Object[]{id, DescriptionTemplate.class.getSimpleName()}, LocaleContextHolder.getLocale())); throw new MyNotFoundException(messageSource.getMessage("General_ItemNotFound", new Object[]{id, DescriptionTemplate.class.getSimpleName()}, LocaleContextHolder.getLocale()));

View File

@ -23,7 +23,6 @@ import gr.cite.tools.logging.LoggerService;
import gr.cite.tools.logging.MapLogEntry; import gr.cite.tools.logging.MapLogEntry;
import gr.cite.tools.validation.ValidationFilterAnnotation; import gr.cite.tools.validation.ValidationFilterAnnotation;
import org.slf4j.LoggerFactory; import org.slf4j.LoggerFactory;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.context.MessageSource; import org.springframework.context.MessageSource;
import org.springframework.context.i18n.LocaleContextHolder; import org.springframework.context.i18n.LocaleContextHolder;
import org.springframework.transaction.annotation.Transactional; import org.springframework.transaction.annotation.Transactional;
@ -69,10 +68,10 @@ public class DescriptionTemplateTypeController {
this.censorFactory.censor(DescriptionTemplateTypeCensor.class).censor(lookup.getProject(), null); this.censorFactory.censor(DescriptionTemplateTypeCensor.class).censor(lookup.getProject(), null);
DescriptionTemplateTypeQuery query = lookup.enrich(this.queryFactory).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic); DescriptionTemplateTypeQuery query = lookup.enrich(this.queryFactory).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission);
List<DescriptionTemplateTypeEntity> data = query.collectAs(lookup.getProject()); List<DescriptionTemplateTypeEntity> data = query.collectAs(lookup.getProject());
List<DescriptionTemplateType> models = this.builderFactory.builder(DescriptionTemplateTypeBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).build(lookup.getProject(), data); List<DescriptionTemplateType> models = this.builderFactory.builder(DescriptionTemplateTypeBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission).build(lookup.getProject(), data);
long count = (lookup.getMetadata() != null && lookup.getMetadata().getCountAll()) ? query.count() : models.size(); long count = (lookup.getMetadata() != null && lookup.getMetadata().getCountAll()) ? query.count() : models.size();
this.auditService.track(AuditableAction.DescriptionTemplateType_Query, "lookup", lookup); this.auditService.track(AuditableAction.DescriptionTemplateType_Query, "lookup", lookup);
@ -87,8 +86,8 @@ public class DescriptionTemplateTypeController {
this.censorFactory.censor(DescriptionTemplateTypeCensor.class).censor(fieldSet, null); this.censorFactory.censor(DescriptionTemplateTypeCensor.class).censor(fieldSet, null);
DescriptionTemplateTypeQuery query = this.queryFactory.query(DescriptionTemplateTypeQuery.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).ids(id); DescriptionTemplateTypeQuery query = this.queryFactory.query(DescriptionTemplateTypeQuery.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission).ids(id);
DescriptionTemplateType model = this.builderFactory.builder(DescriptionTemplateTypeBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).build(fieldSet, query.firstAs(fieldSet)); DescriptionTemplateType model = this.builderFactory.builder(DescriptionTemplateTypeBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission).build(fieldSet, query.firstAs(fieldSet));
if (model == null) if (model == null)
throw new MyNotFoundException(messageSource.getMessage("General_ItemNotFound", new Object[]{id, DescriptionTemplateType.class.getSimpleName()}, LocaleContextHolder.getLocale())); throw new MyNotFoundException(messageSource.getMessage("General_ItemNotFound", new Object[]{id, DescriptionTemplateType.class.getSimpleName()}, LocaleContextHolder.getLocale()));

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@ -81,10 +81,10 @@ public class DmpBlueprintController {
logger.debug("querying {}", DmpBlueprint.class.getSimpleName()); logger.debug("querying {}", DmpBlueprint.class.getSimpleName());
this.censorFactory.censor(DmpBlueprintCensor.class).censor(lookup.getProject(), null); this.censorFactory.censor(DmpBlueprintCensor.class).censor(lookup.getProject(), null);
DmpBlueprintQuery query = lookup.enrich(this.queryFactory).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic); DmpBlueprintQuery query = lookup.enrich(this.queryFactory).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission);
List<DmpBlueprintEntity> data = query.collectAs(lookup.getProject()); List<DmpBlueprintEntity> data = query.collectAs(lookup.getProject());
List<DmpBlueprint> models = this.builderFactory.builder(DmpBlueprintBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).build(lookup.getProject(), data); List<DmpBlueprint> models = this.builderFactory.builder(DmpBlueprintBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission).build(lookup.getProject(), data);
long count = (lookup.getMetadata() != null && lookup.getMetadata().getCountAll()) ? query.count() : models.size(); long count = (lookup.getMetadata() != null && lookup.getMetadata().getCountAll()) ? query.count() : models.size();
this.auditService.track(AuditableAction.DmpBlueprint_Query, "lookup", lookup); this.auditService.track(AuditableAction.DmpBlueprint_Query, "lookup", lookup);
@ -98,8 +98,8 @@ public class DmpBlueprintController {
this.censorFactory.censor(DmpBlueprintCensor.class).censor(fieldSet, null); this.censorFactory.censor(DmpBlueprintCensor.class).censor(fieldSet, null);
DmpBlueprintQuery query = this.queryFactory.query(DmpBlueprintQuery.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).ids(id); DmpBlueprintQuery query = this.queryFactory.query(DmpBlueprintQuery.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission).ids(id);
DmpBlueprint model = this.builderFactory.builder(DmpBlueprintBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).build(fieldSet, query.firstAs(fieldSet)); DmpBlueprint model = this.builderFactory.builder(DmpBlueprintBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission).build(fieldSet, query.firstAs(fieldSet));
if (model == null) if (model == null)
throw new MyNotFoundException(messageSource.getMessage("General_ItemNotFound", new Object[]{id, DmpBlueprint.class.getSimpleName()}, LocaleContextHolder.getLocale())); throw new MyNotFoundException(messageSource.getMessage("General_ItemNotFound", new Object[]{id, DmpBlueprint.class.getSimpleName()}, LocaleContextHolder.getLocale()));

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@ -5,11 +5,7 @@ import eu.eudat.authorization.AuthorizationFlags;
import eu.eudat.commons.enums.DmpAccessType; import eu.eudat.commons.enums.DmpAccessType;
import eu.eudat.commons.enums.DmpStatus; import eu.eudat.commons.enums.DmpStatus;
import eu.eudat.commons.enums.IsActive; import eu.eudat.commons.enums.IsActive;
import eu.eudat.model.builder.DescriptionBuilder;
import eu.eudat.model.builder.PublicDmpBuilder; import eu.eudat.model.builder.PublicDmpBuilder;
import eu.eudat.model.censorship.PublicDescriptionCensor;
import eu.eudat.query.DescriptionQuery;
import eu.eudat.query.DmpDescriptionTemplateQuery;
import gr.cite.tools.validation.ValidationFilterAnnotation; import gr.cite.tools.validation.ValidationFilterAnnotation;
import eu.eudat.model.*; import eu.eudat.model.*;
import eu.eudat.model.builder.DmpBuilder; import eu.eudat.model.builder.DmpBuilder;
@ -123,8 +119,7 @@ public class DmpController {
this.censorFactory.censor(DmpCensor.class).censor(lookup.getProject(), null); this.censorFactory.censor(DmpCensor.class).censor(lookup.getProject(), null);
QueryResult<Dmp> queryResult = this.elasticQueryHelperService.collect(lookup, AuthorizationFlags.OwnerOrDmpAssociatedOrPermission, null);
QueryResult<Dmp> queryResult = this.elasticQueryHelperService.collect(lookup, AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic, null);
this.auditService.track(AuditableAction.Dmp_Query, "lookup", lookup); this.auditService.track(AuditableAction.Dmp_Query, "lookup", lookup);
@ -137,8 +132,8 @@ public class DmpController {
this.censorFactory.censor(DmpCensor.class).censor(fieldSet, null); this.censorFactory.censor(DmpCensor.class).censor(fieldSet, null);
DmpQuery query = this.queryFactory.query(DmpQuery.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).ids(id); DmpQuery query = this.queryFactory.query(DmpQuery.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission).ids(id);
Dmp model = this.builderFactory.builder(DmpBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).build(fieldSet, query.firstAs(fieldSet)); Dmp model = this.builderFactory.builder(DmpBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission).build(fieldSet, query.firstAs(fieldSet));
if (model == null) if (model == null)
throw new MyNotFoundException(messageSource.getMessage("General_ItemNotFound", new Object[]{id, Dmp.class.getSimpleName()}, LocaleContextHolder.getLocale())); throw new MyNotFoundException(messageSource.getMessage("General_ItemNotFound", new Object[]{id, Dmp.class.getSimpleName()}, LocaleContextHolder.getLocale()));
@ -242,11 +237,17 @@ public class DmpController {
return new QueryResult<>(persisted); return new QueryResult<>(persisted);
} }
@GetMapping("{id}/export/{type}") @GetMapping("{id}/export/{transformerId}/{type}")
public ResponseEntity<byte[]> export(@PathVariable("id") UUID id, @PathVariable("type") String exportType) throws InvalidApplicationException, IOException { public ResponseEntity<byte[]> export(@PathVariable("id") UUID id, @PathVariable("transformerId") String transformerId, @PathVariable("type") String exportType) throws InvalidApplicationException, IOException {
logger.debug(new MapLogEntry("exporting dmp")); logger.debug(new MapLogEntry("exporting dmp").And("id", id).And("transformerId", transformerId).And("exportType", exportType));
return this.dmpService.export(id, exportType); ResponseEntity<byte[]> bytes = this.dmpService.export(id, transformerId, exportType);
this.auditService.track(AuditableAction.Dmp_Export, Map.ofEntries(
new AbstractMap.SimpleEntry<String, Object>("id", id),
new AbstractMap.SimpleEntry<String, Object>("transformerId", transformerId),
new AbstractMap.SimpleEntry<String, Object>("exportType", exportType)
));
return bytes;
} }
@PostMapping("{id}/invite-users") @PostMapping("{id}/invite-users")

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@ -75,10 +75,10 @@ public class EntityDoiController {
this.censorFactory.censor(EntityDoiCensor.class).censor(lookup.getProject(), null); this.censorFactory.censor(EntityDoiCensor.class).censor(lookup.getProject(), null);
EntityDoiQuery query = lookup.enrich(this.queryFactory).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic); EntityDoiQuery query = lookup.enrich(this.queryFactory).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission);
List<EntityDoiEntity> data = query.collectAs(lookup.getProject()); List<EntityDoiEntity> data = query.collectAs(lookup.getProject());
List<EntityDoi> models = this.builderFactory.builder(EntityDoiBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).build(lookup.getProject(), data); List<EntityDoi> models = this.builderFactory.builder(EntityDoiBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission).build(lookup.getProject(), data);
long count = (lookup.getMetadata() != null && lookup.getMetadata().getCountAll()) ? query.count() : models.size(); long count = (lookup.getMetadata() != null && lookup.getMetadata().getCountAll()) ? query.count() : models.size();
this.auditService.track(AuditableAction.EntityDoi_Query, "lookup", lookup); this.auditService.track(AuditableAction.EntityDoi_Query, "lookup", lookup);
@ -92,8 +92,8 @@ public class EntityDoiController {
this.censorFactory.censor(EntityDoiCensor.class).censor(fieldSet, null); this.censorFactory.censor(EntityDoiCensor.class).censor(fieldSet, null);
EntityDoiQuery query = this.queryFactory.query(EntityDoiQuery.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).ids(id); EntityDoiQuery query = this.queryFactory.query(EntityDoiQuery.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission).ids(id);
EntityDoi model = this.builderFactory.builder(EntityDoiBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).build(fieldSet, query.firstAs(fieldSet)); EntityDoi model = this.builderFactory.builder(EntityDoiBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission).build(fieldSet, query.firstAs(fieldSet));
if (model == null) if (model == null)
throw new MyNotFoundException(messageSource.getMessage("General_ItemNotFound", new Object[]{id, EntityDoi.class.getSimpleName()}, LocaleContextHolder.getLocale())); throw new MyNotFoundException(messageSource.getMessage("General_ItemNotFound", new Object[]{id, EntityDoi.class.getSimpleName()}, LocaleContextHolder.getLocale()));

View File

@ -52,7 +52,7 @@ public class FileTransformerController {
logger.debug(new MapLogEntry("exporting dmp")); logger.debug(new MapLogEntry("exporting dmp"));
HttpHeaders headers = new HttpHeaders(); HttpHeaders headers = new HttpHeaders();
FileEnvelope fileEnvelope = this.fileTransformerService.exportDmp(requestModel.getId(), requestModel.getFormat()); FileEnvelope fileEnvelope = this.fileTransformerService.exportDmp(requestModel.getId(), requestModel.getRepositoryId(), requestModel.getFormat());
headers.add("Content-Disposition", "attachment;filename=" + fileEnvelope.getFilename()); headers.add("Content-Disposition", "attachment;filename=" + fileEnvelope.getFilename());
byte[] data = fileEnvelope.getFile(); byte[] data = fileEnvelope.getFile();
headers.setContentType(MediaType.APPLICATION_OCTET_STREAM); headers.setContentType(MediaType.APPLICATION_OCTET_STREAM);

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@ -6,7 +6,6 @@ import eu.eudat.authorization.AuthorizationFlags;
import gr.cite.tools.validation.ValidationFilterAnnotation; import gr.cite.tools.validation.ValidationFilterAnnotation;
import eu.eudat.data.LanguageEntity; import eu.eudat.data.LanguageEntity;
import eu.eudat.model.Language; import eu.eudat.model.Language;
import eu.eudat.model.UserContactInfo;
import eu.eudat.model.builder.LanguageBuilder; import eu.eudat.model.builder.LanguageBuilder;
import eu.eudat.model.censorship.LanguageCensor; import eu.eudat.model.censorship.LanguageCensor;
import eu.eudat.model.persist.LanguagePersist; import eu.eudat.model.persist.LanguagePersist;
@ -35,12 +34,11 @@ import org.springframework.web.bind.annotation.*;
import javax.management.InvalidApplicationException; import javax.management.InvalidApplicationException;
import java.io.IOException; import java.io.IOException;
import java.util.AbstractMap; import java.util.*;
import java.util.List;
import java.util.Map;
import java.util.UUID;
import java.util.stream.Collectors; import java.util.stream.Collectors;
import static eu.eudat.authorization.AuthorizationFlags.Public;
@RestController @RestController
@RequestMapping(path = {"api/language"}) @RequestMapping(path = {"api/language"})
public class LanguageController { public class LanguageController {
@ -81,9 +79,9 @@ public class LanguageController {
this.censorFactory.censor(LanguageCensor.class).censor(lookup.getProject(), null); this.censorFactory.censor(LanguageCensor.class).censor(lookup.getProject(), null);
LanguageQuery query = lookup.enrich(this.queryFactory).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic); LanguageQuery query = lookup.enrich(this.queryFactory).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission);
List<LanguageEntity> data = query.collectAs(lookup.getProject()); List<LanguageEntity> data = query.collectAs(lookup.getProject());
List<Language> models = this.builderFactory.builder(LanguageBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).build(lookup.getProject(), data); List<Language> models = this.builderFactory.builder(LanguageBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission).build(lookup.getProject(), data);
long count = (lookup.getMetadata() != null && lookup.getMetadata().getCountAll()) ? query.count() : models.size(); long count = (lookup.getMetadata() != null && lookup.getMetadata().getCountAll()) ? query.count() : models.size();
this.auditService.track(AuditableAction.Language_Query, "lookup", lookup); this.auditService.track(AuditableAction.Language_Query, "lookup", lookup);
@ -97,8 +95,8 @@ public class LanguageController {
this.censorFactory.censor(LanguageCensor.class).censor(fieldSet, null); this.censorFactory.censor(LanguageCensor.class).censor(fieldSet, null);
LanguageQuery query = this.queryFactory.query(LanguageQuery.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).ids(id); LanguageQuery query = this.queryFactory.query(LanguageQuery.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission).ids(id);
Language model = this.builderFactory.builder(LanguageBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).build(fieldSet, query.firstAs(fieldSet)); Language model = this.builderFactory.builder(LanguageBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission).build(fieldSet, query.firstAs(fieldSet));
if (model == null) if (model == null)
throw new MyNotFoundException(messageSource.getMessage("General_ItemNotFound", new Object[]{id, Language.class.getSimpleName()}, LocaleContextHolder.getLocale())); throw new MyNotFoundException(messageSource.getMessage("General_ItemNotFound", new Object[]{id, Language.class.getSimpleName()}, LocaleContextHolder.getLocale()));
@ -116,8 +114,8 @@ public class LanguageController {
this.censorFactory.censor(LanguageCensor.class).censor(fieldSet, null); this.censorFactory.censor(LanguageCensor.class).censor(fieldSet, null);
LanguageQuery query = this.queryFactory.query(LanguageQuery.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).codes(code); LanguageQuery query = this.queryFactory.query(LanguageQuery.class).authorize(EnumSet.of(Public)).codes(code);
Language model = this.builderFactory.builder(LanguageBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).build(fieldSet, query.firstAs(fieldSet)); Language model = this.builderFactory.builder(LanguageBuilder.class).authorize(EnumSet.of(Public)).build(fieldSet, query.firstAs(fieldSet));
if (model == null) if (model == null)
throw new MyNotFoundException(messageSource.getMessage("General_ItemNotFound", new Object[]{code, Language.class.getSimpleName()}, LocaleContextHolder.getLocale())); throw new MyNotFoundException(messageSource.getMessage("General_ItemNotFound", new Object[]{code, Language.class.getSimpleName()}, LocaleContextHolder.getLocale()));
@ -139,10 +137,10 @@ public class LanguageController {
this.censorFactory.censor(LanguageCensor.class).censor(lookup.getProject(), null); this.censorFactory.censor(LanguageCensor.class).censor(lookup.getProject(), null);
LanguageQuery query = lookup.enrich(this.queryFactory).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic); LanguageQuery query = lookup.enrich(this.queryFactory).authorize(EnumSet.of(Public));
query.setOrder(new Ordering().addAscending(Language._ordinal)); query.setOrder(new Ordering().addAscending(Language._ordinal));
List<LanguageEntity> data = query.collectAs(lookup.getProject()); List<LanguageEntity> data = query.collectAs(lookup.getProject());
List<Language> models = this.builderFactory.builder(LanguageBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).build(lookup.getProject(), data); List<Language> models = this.builderFactory.builder(LanguageBuilder.class).authorize(EnumSet.of(Public)).build(lookup.getProject(), data);
long count = (lookup.getMetadata() != null && lookup.getMetadata().getCountAll()) ? query.count() : models.size(); long count = (lookup.getMetadata() != null && lookup.getMetadata().getCountAll()) ? query.count() : models.size();

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@ -85,9 +85,9 @@ public class LockController {
this.censorFactory.censor(LockCensor.class).censor(lookup.getProject(), null); this.censorFactory.censor(LockCensor.class).censor(lookup.getProject(), null);
LockQuery query = lookup.enrich(this.queryFactory).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic); LockQuery query = lookup.enrich(this.queryFactory).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission);
List<LockEntity> data = query.collectAs(lookup.getProject()); List<LockEntity> data = query.collectAs(lookup.getProject());
List<Lock> models = this.builderFactory.builder(LockBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).build(lookup.getProject(), data); List<Lock> models = this.builderFactory.builder(LockBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission).build(lookup.getProject(), data);
long count = (lookup.getMetadata() != null && lookup.getMetadata().getCountAll()) ? query.count() : models.size(); long count = (lookup.getMetadata() != null && lookup.getMetadata().getCountAll()) ? query.count() : models.size();
this.auditService.track(AuditableAction.Lock_Query, "lookup", lookup); this.auditService.track(AuditableAction.Lock_Query, "lookup", lookup);
@ -101,8 +101,8 @@ public class LockController {
this.censorFactory.censor(LockCensor.class).censor(fieldSet, null); this.censorFactory.censor(LockCensor.class).censor(fieldSet, null);
LockQuery query = this.queryFactory.query(LockQuery.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).ids(id); LockQuery query = this.queryFactory.query(LockQuery.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission).ids(id);
Lock model = this.builderFactory.builder(LockBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).build(fieldSet, query.firstAs(fieldSet)); Lock model = this.builderFactory.builder(LockBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission).build(fieldSet, query.firstAs(fieldSet));
if (model == null) if (model == null)
throw new MyNotFoundException(messageSource.getMessage("General_ItemNotFound", new Object[]{id, Lock.class.getSimpleName()}, LocaleContextHolder.getLocale())); throw new MyNotFoundException(messageSource.getMessage("General_ItemNotFound", new Object[]{id, Lock.class.getSimpleName()}, LocaleContextHolder.getLocale()));
@ -137,8 +137,8 @@ public class LockController {
this.censorFactory.censor(LockCensor.class).censor(fieldSet, null); this.censorFactory.censor(LockCensor.class).censor(fieldSet, null);
LockQuery query = this.queryFactory.query(LockQuery.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).targetIds(targetId); LockQuery query = this.queryFactory.query(LockQuery.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission).targetIds(targetId);
Lock model = this.builderFactory.builder(LockBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).build(fieldSet, query.firstAs(fieldSet)); Lock model = this.builderFactory.builder(LockBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission).build(fieldSet, query.firstAs(fieldSet));
if (model == null) if (model == null)
throw new MyNotFoundException(messageSource.getMessage("General_ItemNotFound", new Object[]{targetId, Lock.class.getSimpleName()}, LocaleContextHolder.getLocale())); throw new MyNotFoundException(messageSource.getMessage("General_ItemNotFound", new Object[]{targetId, Lock.class.getSimpleName()}, LocaleContextHolder.getLocale()));

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@ -89,9 +89,9 @@ public class PrefillingSourceController {
this.censorFactory.censor(PrefillingSourceCensor.class).censor(lookup.getProject(), null); this.censorFactory.censor(PrefillingSourceCensor.class).censor(lookup.getProject(), null);
PrefillingSourceQuery query = lookup.enrich(this.queryFactory).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic); PrefillingSourceQuery query = lookup.enrich(this.queryFactory).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission);
List<PrefillingSourceEntity> data = query.collectAs(lookup.getProject()); List<PrefillingSourceEntity> data = query.collectAs(lookup.getProject());
List<PrefillingSource> models = this.builderFactory.builder(PrefillingSourceBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).build(lookup.getProject(), data); List<PrefillingSource> models = this.builderFactory.builder(PrefillingSourceBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission).build(lookup.getProject(), data);
long count = (lookup.getMetadata() != null && lookup.getMetadata().getCountAll()) ? query.count() : models.size(); long count = (lookup.getMetadata() != null && lookup.getMetadata().getCountAll()) ? query.count() : models.size();
this.auditService.track(AuditableAction.PrefillingSource_Query, "lookup", lookup); this.auditService.track(AuditableAction.PrefillingSource_Query, "lookup", lookup);
@ -105,8 +105,8 @@ public class PrefillingSourceController {
this.censorFactory.censor(PrefillingSourceCensor.class).censor(fieldSet, null); this.censorFactory.censor(PrefillingSourceCensor.class).censor(fieldSet, null);
PrefillingSourceQuery query = this.queryFactory.query(PrefillingSourceQuery.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).ids(id); PrefillingSourceQuery query = this.queryFactory.query(PrefillingSourceQuery.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission).ids(id);
PrefillingSource model = this.builderFactory.builder(PrefillingSourceBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).build(fieldSet, query.firstAs(fieldSet)); PrefillingSource model = this.builderFactory.builder(PrefillingSourceBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission).build(fieldSet, query.firstAs(fieldSet));
if (model == null) if (model == null)
throw new MyNotFoundException(messageSource.getMessage("General_ItemNotFound", new Object[]{id, PrefillingSource.class.getSimpleName()}, LocaleContextHolder.getLocale())); throw new MyNotFoundException(messageSource.getMessage("General_ItemNotFound", new Object[]{id, PrefillingSource.class.getSimpleName()}, LocaleContextHolder.getLocale()));

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@ -81,9 +81,9 @@ public class ReferenceController {
this.censorFactory.censor(ReferenceCensor.class).censor(lookup.getProject(), null); this.censorFactory.censor(ReferenceCensor.class).censor(lookup.getProject(), null);
ReferenceQuery query = lookup.enrich(this.queryFactory).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic); ReferenceQuery query = lookup.enrich(this.queryFactory).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission);
List<ReferenceEntity> data = query.collectAs(lookup.getProject()); List<ReferenceEntity> data = query.collectAs(lookup.getProject());
List<Reference> models = this.builderFactory.builder(ReferenceBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).build(lookup.getProject(), data); List<Reference> models = this.builderFactory.builder(ReferenceBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission).build(lookup.getProject(), data);
long count = (lookup.getMetadata() != null && lookup.getMetadata().getCountAll()) ? query.count() : models.size(); long count = (lookup.getMetadata() != null && lookup.getMetadata().getCountAll()) ? query.count() : models.size();
this.auditService.track(AuditableAction.Reference_Query, "lookup", lookup); this.auditService.track(AuditableAction.Reference_Query, "lookup", lookup);
@ -111,8 +111,8 @@ public class ReferenceController {
this.censorFactory.censor(ReferenceCensor.class).censor(fieldSet, null); this.censorFactory.censor(ReferenceCensor.class).censor(fieldSet, null);
ReferenceQuery query = this.queryFactory.query(ReferenceQuery.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).ids(id); ReferenceQuery query = this.queryFactory.query(ReferenceQuery.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission).ids(id);
Reference model = this.builderFactory.builder(ReferenceBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).build(fieldSet, query.firstAs(fieldSet)); Reference model = this.builderFactory.builder(ReferenceBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission).build(fieldSet, query.firstAs(fieldSet));
if (model == null) if (model == null)
throw new MyNotFoundException(messageSource.getMessage("General_ItemNotFound", new Object[]{id, Reference.class.getSimpleName()}, LocaleContextHolder.getLocale())); throw new MyNotFoundException(messageSource.getMessage("General_ItemNotFound", new Object[]{id, Reference.class.getSimpleName()}, LocaleContextHolder.getLocale()));

View File

@ -5,7 +5,6 @@ import eu.eudat.audit.AuditableAction;
import eu.eudat.authorization.AuthorizationFlags; import eu.eudat.authorization.AuthorizationFlags;
import gr.cite.tools.validation.ValidationFilterAnnotation; import gr.cite.tools.validation.ValidationFilterAnnotation;
import eu.eudat.data.ReferenceTypeEntity; import eu.eudat.data.ReferenceTypeEntity;
import eu.eudat.model.Reference;
import eu.eudat.model.ReferenceType; import eu.eudat.model.ReferenceType;
import eu.eudat.model.builder.ReferenceTypeBuilder; import eu.eudat.model.builder.ReferenceTypeBuilder;
import eu.eudat.model.censorship.ReferenceTypeCensor; import eu.eudat.model.censorship.ReferenceTypeCensor;
@ -81,9 +80,9 @@ public class ReferenceTypeController{
this.censorFactory.censor(ReferenceTypeCensor.class).censor(lookup.getProject(), null); this.censorFactory.censor(ReferenceTypeCensor.class).censor(lookup.getProject(), null);
ReferenceTypeQuery query = lookup.enrich(this.queryFactory).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic); ReferenceTypeQuery query = lookup.enrich(this.queryFactory).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission);
List<ReferenceTypeEntity> data = query.collectAs(lookup.getProject()); List<ReferenceTypeEntity> data = query.collectAs(lookup.getProject());
List<ReferenceType> models = this.builderFactory.builder(ReferenceTypeBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).build(lookup.getProject(), data); List<ReferenceType> models = this.builderFactory.builder(ReferenceTypeBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission).build(lookup.getProject(), data);
long count = (lookup.getMetadata() != null && lookup.getMetadata().getCountAll()) ? query.count() : models.size(); long count = (lookup.getMetadata() != null && lookup.getMetadata().getCountAll()) ? query.count() : models.size();
this.auditService.track(AuditableAction.ReferenceType_Query, "lookup", lookup); this.auditService.track(AuditableAction.ReferenceType_Query, "lookup", lookup);
@ -97,8 +96,8 @@ public class ReferenceTypeController{
this.censorFactory.censor(ReferenceTypeCensor.class).censor(fieldSet, null); this.censorFactory.censor(ReferenceTypeCensor.class).censor(fieldSet, null);
ReferenceTypeQuery query = this.queryFactory.query(ReferenceTypeQuery.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).ids(id); ReferenceTypeQuery query = this.queryFactory.query(ReferenceTypeQuery.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission).ids(id);
ReferenceType model = this.builderFactory.builder(ReferenceTypeBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).build(fieldSet, query.firstAs(fieldSet)); ReferenceType model = this.builderFactory.builder(ReferenceTypeBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission).build(fieldSet, query.firstAs(fieldSet));
if (model == null) if (model == null)
throw new MyNotFoundException(messageSource.getMessage("General_ItemNotFound", new Object[]{id, ReferenceType.class.getSimpleName()}, LocaleContextHolder.getLocale())); throw new MyNotFoundException(messageSource.getMessage("General_ItemNotFound", new Object[]{id, ReferenceType.class.getSimpleName()}, LocaleContextHolder.getLocale()));
@ -116,8 +115,8 @@ public class ReferenceTypeController{
this.censorFactory.censor(ReferenceTypeCensor.class).censor(fieldSet, null); this.censorFactory.censor(ReferenceTypeCensor.class).censor(fieldSet, null);
ReferenceTypeQuery query = this.queryFactory.query(ReferenceTypeQuery.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).codes(code); ReferenceTypeQuery query = this.queryFactory.query(ReferenceTypeQuery.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission).codes(code);
ReferenceType model = this.builderFactory.builder(ReferenceTypeBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).build(fieldSet, query.firstAs(fieldSet)); ReferenceType model = this.builderFactory.builder(ReferenceTypeBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission).build(fieldSet, query.firstAs(fieldSet));
if (model == null) if (model == null)
throw new MyNotFoundException(messageSource.getMessage("General_ItemNotFound", new Object[]{code, ReferenceType.class.getSimpleName()}, LocaleContextHolder.getLocale())); throw new MyNotFoundException(messageSource.getMessage("General_ItemNotFound", new Object[]{code, ReferenceType.class.getSimpleName()}, LocaleContextHolder.getLocale()));

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@ -1,11 +1,9 @@
package eu.eudat.controllers; package eu.eudat.controllers;
import com.fasterxml.jackson.core.JsonProcessingException; import com.fasterxml.jackson.core.JsonProcessingException;
import com.tdunning.math.stats.Sort;
import eu.eudat.audit.AuditableAction; import eu.eudat.audit.AuditableAction;
import eu.eudat.authorization.AuthorizationFlags; import eu.eudat.authorization.AuthorizationFlags;
import eu.eudat.commons.enums.SupportiveMaterialFieldType; import eu.eudat.commons.enums.SupportiveMaterialFieldType;
import eu.eudat.service.storage.StorageFileService;
import gr.cite.tools.fieldset.BaseFieldSet; import gr.cite.tools.fieldset.BaseFieldSet;
import gr.cite.tools.validation.ValidationFilterAnnotation; import gr.cite.tools.validation.ValidationFilterAnnotation;
import eu.eudat.data.SupportiveMaterialEntity; import eu.eudat.data.SupportiveMaterialEntity;
@ -17,7 +15,6 @@ import eu.eudat.model.result.QueryResult;
import eu.eudat.query.SupportiveMaterialQuery; import eu.eudat.query.SupportiveMaterialQuery;
import eu.eudat.query.lookup.SupportiveMaterialLookup; import eu.eudat.query.lookup.SupportiveMaterialLookup;
import eu.eudat.service.supportivematerial.SupportiveMaterialService; import eu.eudat.service.supportivematerial.SupportiveMaterialService;
import gr.cite.commons.web.authz.service.AuthorizationService;
import gr.cite.tools.auditing.AuditService; import gr.cite.tools.auditing.AuditService;
import gr.cite.tools.data.builder.BuilderFactory; import gr.cite.tools.data.builder.BuilderFactory;
import gr.cite.tools.data.censor.CensorFactory; import gr.cite.tools.data.censor.CensorFactory;
@ -83,9 +80,9 @@ public class SupportiveMaterialController {
this.censorFactory.censor(SupportiveMaterialCensor.class).censor(lookup.getProject(), null); this.censorFactory.censor(SupportiveMaterialCensor.class).censor(lookup.getProject(), null);
SupportiveMaterialQuery query = lookup.enrich(this.queryFactory).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic); SupportiveMaterialQuery query = lookup.enrich(this.queryFactory).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission);
List<SupportiveMaterialEntity> data = query.collectAs(lookup.getProject()); List<SupportiveMaterialEntity> data = query.collectAs(lookup.getProject());
List<SupportiveMaterial> models = this.builderFactory.builder(SupportiveMaterialBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).build(lookup.getProject(), data); List<SupportiveMaterial> models = this.builderFactory.builder(SupportiveMaterialBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission).build(lookup.getProject(), data);
long count = (lookup.getMetadata() != null && lookup.getMetadata().getCountAll()) ? query.count() : models.size(); long count = (lookup.getMetadata() != null && lookup.getMetadata().getCountAll()) ? query.count() : models.size();
this.auditService.track(AuditableAction.SupportiveMaterial_Query, "lookup", lookup); this.auditService.track(AuditableAction.SupportiveMaterial_Query, "lookup", lookup);
@ -99,8 +96,8 @@ public class SupportiveMaterialController {
this.censorFactory.censor(SupportiveMaterialCensor.class).censor(fieldSet, null); this.censorFactory.censor(SupportiveMaterialCensor.class).censor(fieldSet, null);
SupportiveMaterialQuery query = this.queryFactory.query(SupportiveMaterialQuery.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).ids(id); SupportiveMaterialQuery query = this.queryFactory.query(SupportiveMaterialQuery.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission).ids(id);
SupportiveMaterial model = this.builderFactory.builder(SupportiveMaterialBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).build(fieldSet, query.firstAs(fieldSet)); SupportiveMaterial model = this.builderFactory.builder(SupportiveMaterialBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission).build(fieldSet, query.firstAs(fieldSet));
if (model == null) if (model == null)
throw new MyNotFoundException(messageSource.getMessage("General_ItemNotFound", new Object[]{id, SupportiveMaterial.class.getSimpleName()}, LocaleContextHolder.getLocale())); throw new MyNotFoundException(messageSource.getMessage("General_ItemNotFound", new Object[]{id, SupportiveMaterial.class.getSimpleName()}, LocaleContextHolder.getLocale()));
@ -117,7 +114,7 @@ public class SupportiveMaterialController {
logger.debug("querying {}", SupportiveMaterial.class.getSimpleName()); logger.debug("querying {}", SupportiveMaterial.class.getSimpleName());
SupportiveMaterialQuery query = this.queryFactory.query(SupportiveMaterialQuery.class).types(SupportiveMaterialFieldType.of(type)).languageCodes(language).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic); SupportiveMaterialQuery query = this.queryFactory.query(SupportiveMaterialQuery.class).types(SupportiveMaterialFieldType.of(type)).languageCodes(language).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission);
List<SupportiveMaterialEntity> data = query.collectAs(new BaseFieldSet().ensure(SupportiveMaterial._id).ensure(SupportiveMaterial._payload)); List<SupportiveMaterialEntity> data = query.collectAs(new BaseFieldSet().ensure(SupportiveMaterial._id).ensure(SupportiveMaterial._payload));
byte[] content; byte[] content;
if (data.size() == 1) content = data.getFirst().getPayload().getBytes(); if (data.size() == 1) content = data.getFirst().getPayload().getBytes();

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@ -23,7 +23,6 @@ import gr.cite.tools.fieldset.FieldSet;
import gr.cite.tools.logging.LoggerService; import gr.cite.tools.logging.LoggerService;
import gr.cite.tools.logging.MapLogEntry; import gr.cite.tools.logging.MapLogEntry;
import org.slf4j.LoggerFactory; import org.slf4j.LoggerFactory;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.context.MessageSource; import org.springframework.context.MessageSource;
import org.springframework.context.i18n.LocaleContextHolder; import org.springframework.context.i18n.LocaleContextHolder;
import org.springframework.transaction.annotation.Transactional; import org.springframework.transaction.annotation.Transactional;
@ -71,10 +70,10 @@ public class TagController {
this.censorFactory.censor(TagCensor.class).censor(lookup.getProject(), null); this.censorFactory.censor(TagCensor.class).censor(lookup.getProject(), null);
TagQuery query = lookup.enrich(this.queryFactory).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic); TagQuery query = lookup.enrich(this.queryFactory).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission);
List<TagEntity> data = query.collectAs(lookup.getProject()); List<TagEntity> data = query.collectAs(lookup.getProject());
List<Tag> models = this.builderFactory.builder(TagBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).build(lookup.getProject(), data); List<Tag> models = this.builderFactory.builder(TagBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission).build(lookup.getProject(), data);
long count = (lookup.getMetadata() != null && lookup.getMetadata().getCountAll()) ? query.count() : models.size(); long count = (lookup.getMetadata() != null && lookup.getMetadata().getCountAll()) ? query.count() : models.size();
this.auditService.track(AuditableAction.Tag_Query, "lookup", lookup); this.auditService.track(AuditableAction.Tag_Query, "lookup", lookup);
@ -88,8 +87,8 @@ public class TagController {
this.censorFactory.censor(TagCensor.class).censor(fieldSet, null); this.censorFactory.censor(TagCensor.class).censor(fieldSet, null);
TagQuery query = this.queryFactory.query(TagQuery.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).ids(id); TagQuery query = this.queryFactory.query(TagQuery.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission).ids(id);
Tag model = this.builderFactory.builder(TagBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).build(fieldSet, query.firstAs(fieldSet)); Tag model = this.builderFactory.builder(TagBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission).build(fieldSet, query.firstAs(fieldSet));
if (model == null) if (model == null)
throw new MyNotFoundException(messageSource.getMessage("General_ItemNotFound", new Object[]{id, Tag.class.getSimpleName()}, LocaleContextHolder.getLocale())); throw new MyNotFoundException(messageSource.getMessage("General_ItemNotFound", new Object[]{id, Tag.class.getSimpleName()}, LocaleContextHolder.getLocale()));

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@ -82,10 +82,10 @@ public class TenantController {
logger.debug("querying {}", Tenant.class.getSimpleName()); logger.debug("querying {}", Tenant.class.getSimpleName());
this.censorFactory.censor(TenantCensor.class).censor(lookup.getProject(), null); this.censorFactory.censor(TenantCensor.class).censor(lookup.getProject(), null);
TenantQuery query = lookup.enrich(this.queryFactory).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic); TenantQuery query = lookup.enrich(this.queryFactory).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission);
List<TenantEntity> data = query.collectAs(lookup.getProject()); List<TenantEntity> data = query.collectAs(lookup.getProject());
List<Tenant> models = this.builderFactory.builder(TenantBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).build(lookup.getProject(), data); List<Tenant> models = this.builderFactory.builder(TenantBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission).build(lookup.getProject(), data);
for (Tenant model : models) { for (Tenant model : models) {
models.set(models.indexOf(model), this.tenantService.decryptTenant(model)); models.set(models.indexOf(model), this.tenantService.decryptTenant(model));
} }
@ -102,8 +102,8 @@ public class TenantController {
this.censorFactory.censor(TenantCensor.class).censor(fieldSet, null); this.censorFactory.censor(TenantCensor.class).censor(fieldSet, null);
TenantQuery query = this.queryFactory.query(TenantQuery.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).ids(id); TenantQuery query = this.queryFactory.query(TenantQuery.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission).ids(id);
Tenant model = this.builderFactory.builder(TenantBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermissionOrPublic).build(fieldSet, query.firstAs(fieldSet)); Tenant model = this.builderFactory.builder(TenantBuilder.class).authorize(AuthorizationFlags.OwnerOrDmpAssociatedOrPermission).build(fieldSet, query.firstAs(fieldSet));
if (model == null) if (model == null)
throw new MyNotFoundException(messageSource.getMessage("General_ItemNotFound", new Object[]{id, Tenant.class.getSimpleName()}, LocaleContextHolder.getLocale())); throw new MyNotFoundException(messageSource.getMessage("General_ItemNotFound", new Object[]{id, Tenant.class.getSimpleName()}, LocaleContextHolder.getLocale()));

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