Merge branch 'dmp-refactoring' of https://code-repo.d4science.org/MaDgiK-CITE/argos into dmp-refactoring
This commit is contained in:
commit
9de176d3eb
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@ -14,8 +14,11 @@ import gr.cite.tools.validation.ValidationFilterAnnotation;
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import io.swagger.v3.oas.annotations.Hidden;
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import io.swagger.v3.oas.annotations.Operation;
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import io.swagger.v3.oas.annotations.Parameter;
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import io.swagger.v3.oas.annotations.enums.ParameterIn;
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import io.swagger.v3.oas.annotations.media.ArraySchema;
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import io.swagger.v3.oas.annotations.media.Content;
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import io.swagger.v3.oas.annotations.media.ExampleObject;
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import io.swagger.v3.oas.annotations.media.Schema;
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import io.swagger.v3.oas.annotations.responses.ApiResponse;
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import io.swagger.v3.oas.annotations.tags.Tag;
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import jakarta.xml.bind.JAXBException;
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@ -27,7 +30,8 @@ import org.opencdmp.commons.enums.IsActive;
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import org.opencdmp.controllers.swagger.SwaggerHelpers;
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import org.opencdmp.controllers.swagger.annotation.Swagger400;
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import org.opencdmp.controllers.swagger.annotation.Swagger404;
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import org.opencdmp.controllers.swagger.annotation.SwaggerErrorResponses;
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import org.opencdmp.controllers.swagger.annotation.SwaggerCommonErrorResponses;
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import org.opencdmp.controllers.swagger.annotation.OperationWithTenantHeader;
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import org.opencdmp.convention.ConventionService;
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import org.opencdmp.data.StorageFileEntity;
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import org.opencdmp.model.DescriptionValidationResult;
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@ -76,7 +80,7 @@ import static org.opencdmp.authorization.AuthorizationFlags.Public;
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@RestController
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@RequestMapping(path = "api/description")
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@Tag(name = "Descriptions", description = "Manage descriptions")
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@SwaggerErrorResponses
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@SwaggerCommonErrorResponses
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public class DescriptionController {
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private static final LoggerService logger = new LoggerService(LoggerFactory.getLogger(DescriptionController.class));
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@ -117,7 +121,7 @@ public class DescriptionController {
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}
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@PostMapping("public/query")
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@Operation(summary = "Query public descriptions")
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@OperationWithTenantHeader(summary = "Query public descriptions")
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@Hidden
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public QueryResult<PublicDescription> publicQuery(@RequestBody DescriptionLookup lookup) throws MyApplicationException, MyForbiddenException {
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logger.debug("querying {}", PublicDescription.class.getSimpleName());
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@ -133,7 +137,7 @@ public class DescriptionController {
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}
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@GetMapping("public/{id}")
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@Operation(summary = "Fetch a specific public description by id")
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@OperationWithTenantHeader(summary = "Fetch a specific public description by id")
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@Hidden
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public PublicDescription publicGet(@PathVariable("id") UUID id, FieldSet fieldSet) throws MyApplicationException, MyForbiddenException, MyNotFoundException {
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logger.debug(new MapLogEntry("retrieving" + PublicDescription.class.getSimpleName()).And("id", id).And("fields", fieldSet));
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@ -155,7 +159,7 @@ public class DescriptionController {
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}
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@PostMapping("query")
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@Operation(summary = "Query all descriptions", description = SwaggerHelpers.Description.endpoint_query, requestBody = @io.swagger.v3.oas.annotations.parameters.RequestBody(description = SwaggerHelpers.Description.endpoint_query_request_body, content = @Content(
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@OperationWithTenantHeader(summary = "Query all descriptions", description = SwaggerHelpers.Description.endpoint_query, requestBody = @io.swagger.v3.oas.annotations.parameters.RequestBody(description = SwaggerHelpers.Description.endpoint_query_request_body, content = @Content(
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examples = {
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@ExampleObject(
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name = "Pagination and projection",
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@ -182,7 +186,7 @@ public class DescriptionController {
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@GetMapping("{id}")
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@Operation(summary = "Fetch a specific description by id")
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@OperationWithTenantHeader(summary = "Fetch a specific description by id")
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@Swagger404
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public Description get(
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@Parameter(name = "id", description = "The id of a description to fetch", example = "c0c163dc-2965-45a5-9608-f76030578609", required = true) @PathVariable("id") UUID id,
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@ -207,7 +211,7 @@ public class DescriptionController {
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}
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@PostMapping("persist")
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@Operation(summary = "Create a new or update an existing description")
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@OperationWithTenantHeader(summary = "Create a new or update an existing description")
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@Swagger400
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@Swagger404
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@Transactional
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@ -230,7 +234,7 @@ public class DescriptionController {
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}
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@PostMapping("persist-status")
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@Operation(summary = "Update the status of an existing description")
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@OperationWithTenantHeader(summary = "Update the status of an existing description")
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@Swagger400
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@Swagger404
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@Transactional
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@ -253,7 +257,7 @@ public class DescriptionController {
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}
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@PostMapping("get-description-section-permissions")
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@Operation(summary = "Fetch the section specific user permissions")
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@OperationWithTenantHeader(summary = "Fetch the section specific user permissions")
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@Hidden
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@ValidationFilterAnnotation(validator = DescriptionSectionPermissionResolver.DescriptionSectionPermissionResolverPersistValidator.ValidatorName, argumentName = "model")
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public Map<UUID, List<String>> getDescriptionSectionPermissions(@RequestBody DescriptionSectionPermissionResolver model) {
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@ -268,7 +272,7 @@ public class DescriptionController {
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}
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@GetMapping("validate")
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@Operation(summary = "Validate if a description is ready for finalization by id")
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@OperationWithTenantHeader(summary = "Validate if a description is ready for finalization by id")
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@Hidden
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public List<DescriptionValidationResult> validate(@RequestParam("descriptionIds") List<UUID> descriptionIds) throws MyApplicationException, MyForbiddenException, MyNotFoundException, InvalidApplicationException {
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logger.debug(new MapLogEntry("validating" + Description.class.getSimpleName()).And("descriptionIds", descriptionIds));
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@ -285,7 +289,7 @@ public class DescriptionController {
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}
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@DeleteMapping("{id}")
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@Operation(summary = "Delete a description by id")
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@OperationWithTenantHeader(summary = "Delete a description by id")
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@Swagger404
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@Transactional
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public void delete(
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@ -299,7 +303,7 @@ public class DescriptionController {
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}
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@GetMapping("{id}/export/{type}")
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@Operation(summary = "Export a description in various formats by id")
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@OperationWithTenantHeader(summary = "Export a description in various formats by id")
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@Swagger404
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public ResponseEntity<byte[]> export(
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@Parameter(name = "id", description = "The id of a description to export", example = "c0c163dc-2965-45a5-9608-f76030578609", required = true) @PathVariable("id") UUID id,
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@ -311,7 +315,7 @@ public class DescriptionController {
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}
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@PostMapping("field-file/upload")
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@Operation(summary = "Upload a file attachment on a field that supports it")
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@OperationWithTenantHeader(summary = "Upload a file attachment on a field that supports it")
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@Swagger400
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@Swagger404
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@Transactional
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@ -335,7 +339,7 @@ public class DescriptionController {
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}
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@GetMapping("{id}/field-file/{fileId}")
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@Operation(summary = "Fetch a field file attachment as byte array")
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@OperationWithTenantHeader(summary = "Fetch a field file attachment as byte array")
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@Swagger404
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public ResponseEntity<ByteArrayResource> getFieldFile(
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@Parameter(name = "id", description = "The id of a description", example = "c0c163dc-2965-45a5-9608-f76030578609", required = true) @PathVariable("id") UUID id,
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@ -362,7 +366,7 @@ public class DescriptionController {
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}
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@PostMapping("update-description-template")
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@Operation(summary = "Change the template of a description")
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@OperationWithTenantHeader(summary = "Change the template of a description")
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@Swagger400
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@Swagger404
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@Transactional
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@ -379,7 +383,7 @@ public class DescriptionController {
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}
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@RequestMapping(method = RequestMethod.GET, value = "/xml/export/{id}", produces = "application/xml")
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@Operation(summary = "Export a description in xml format by id")
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@OperationWithTenantHeader(summary = "Export a description in xml format by id")
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@Swagger404
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public @ResponseBody ResponseEntity<byte[]> getXml(
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@Parameter(name = "id", description = "The id of a description to export", example = "c0c163dc-2965-45a5-9608-f76030578609", required = true) @PathVariable UUID id
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@ -11,11 +11,14 @@ import gr.cite.tools.fieldset.FieldSet;
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import gr.cite.tools.logging.LoggerService;
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import gr.cite.tools.logging.MapLogEntry;
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import gr.cite.tools.validation.ValidationFilterAnnotation;
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import io.swagger.annotations.ApiImplicitParam;
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import io.swagger.v3.oas.annotations.Hidden;
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import io.swagger.v3.oas.annotations.Operation;
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import io.swagger.v3.oas.annotations.Parameter;
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import io.swagger.v3.oas.annotations.media.ArraySchema;
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import io.swagger.v3.oas.annotations.media.Content;
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import io.swagger.v3.oas.annotations.media.ExampleObject;
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import io.swagger.v3.oas.annotations.media.Schema;
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import io.swagger.v3.oas.annotations.responses.ApiResponse;
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import io.swagger.v3.oas.annotations.tags.Tag;
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import jakarta.xml.bind.JAXBException;
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@ -25,9 +28,10 @@ import org.opencdmp.commons.enums.DmpAccessType;
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import org.opencdmp.commons.enums.DmpStatus;
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import org.opencdmp.commons.enums.IsActive;
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import org.opencdmp.controllers.swagger.SwaggerHelpers;
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import org.opencdmp.controllers.swagger.annotation.OperationWithTenantHeader;
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import org.opencdmp.controllers.swagger.annotation.Swagger400;
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import org.opencdmp.controllers.swagger.annotation.Swagger404;
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import org.opencdmp.controllers.swagger.annotation.SwaggerErrorResponses;
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import org.opencdmp.controllers.swagger.annotation.SwaggerCommonErrorResponses;
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import org.opencdmp.filetransformerbase.models.misc.PreprocessingDmpModel;
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import org.opencdmp.model.DescriptionsToBeFinalized;
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import org.opencdmp.model.DmpUser;
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@ -70,7 +74,7 @@ import static org.opencdmp.authorization.AuthorizationFlags.Public;
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@RestController
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@RequestMapping(path = "api/dmp")
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@Tag(name = "Plans", description = "Manage plans")
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@SwaggerErrorResponses
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@SwaggerCommonErrorResponses
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public class DmpController {
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private static final LoggerService logger = new LoggerService(LoggerFactory.getLogger(DmpController.class));
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@ -107,7 +111,7 @@ public class DmpController {
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}
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@PostMapping("public/query")
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@Operation(summary = "Query public published plans")
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@OperationWithTenantHeader(summary = "Query public published plans")
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@Hidden
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public QueryResult<PublicDmp> publicQuery(@RequestBody DmpLookup lookup) throws MyApplicationException, MyForbiddenException {
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logger.debug("querying {}", Dmp.class.getSimpleName());
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@ -123,7 +127,7 @@ public class DmpController {
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}
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@GetMapping("public/{id}")
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@Operation(summary = "Fetch a specific public published plan by id")
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@OperationWithTenantHeader(summary = "Fetch a specific public published plan by id")
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@Hidden
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public PublicDmp publicGet(@PathVariable("id") UUID id, FieldSet fieldSet, Locale locale) throws MyApplicationException, MyForbiddenException, MyNotFoundException {
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logger.debug(new MapLogEntry("retrieving" + Dmp.class.getSimpleName()).And("id", id).And("fields", fieldSet));
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@ -145,11 +149,17 @@ public class DmpController {
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}
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@PostMapping("query")
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@Operation(summary = "Query all plans", description = SwaggerHelpers.Dmp.endpoint_query, requestBody = @io.swagger.v3.oas.annotations.parameters.RequestBody(description = SwaggerHelpers.Dmp.endpoint_query_request_body, content = @Content(examples = @ExampleObject(
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@OperationWithTenantHeader(summary = "Query all plans", description = SwaggerHelpers.Dmp.endpoint_query, requestBody = @io.swagger.v3.oas.annotations.parameters.RequestBody(description = SwaggerHelpers.Dmp.endpoint_query_request_body, content = @Content(examples = @ExampleObject(
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name = "Pagination and projection",
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description = "Simple paginated request using a property projection list and pagination info",
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value = SwaggerHelpers.Dmp.endpoint_query_request_body_example
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))), responses = @ApiResponse(description = "OK", responseCode = "200", content = @Content(examples = @ExampleObject(
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))), responses = @ApiResponse(description = "OK", responseCode = "200", content = @Content(
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array = @ArraySchema(
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schema = @Schema(
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implementation = Dmp.class
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)
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),
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examples = @ExampleObject(
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name = "First page",
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description = "Example with the first page of paginated results",
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value = SwaggerHelpers.Dmp.endpoint_query_response_example
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@ -167,7 +177,7 @@ public class DmpController {
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}
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@GetMapping("{id}")
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@Operation(summary = "Fetch a specific plan by id")
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@OperationWithTenantHeader(summary = "Fetch a specific plan by id")
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@Swagger404
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public Dmp Get(
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@Parameter(name = "id", description = "The id of a plan to fetch", example = "c0c163dc-2965-45a5-9608-f76030578609", required = true) @PathVariable("id") UUID id,
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@ -192,7 +202,7 @@ public class DmpController {
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}
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@PostMapping("persist")
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@Operation(summary = "Create a new or update an existing plan")
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@OperationWithTenantHeader(summary = "Create a new or update an existing plan")
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@Swagger400
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@Swagger404
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@Transactional
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@ -214,7 +224,7 @@ public class DmpController {
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}
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@DeleteMapping("{id}")
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@Operation(summary = "Delete a plan by id")
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@OperationWithTenantHeader(summary = "Delete a plan by id")
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@Swagger404
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@Transactional
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public void Delete(
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@ -228,7 +238,7 @@ public class DmpController {
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}
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@PostMapping("finalize/{id}")
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@Operation(summary = "Finalize a plan by id")
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@OperationWithTenantHeader(summary = "Finalize a plan by id")
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@Swagger404
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@Transactional
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public boolean finalize(
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@ -248,7 +258,7 @@ public class DmpController {
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}
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@GetMapping("undo-finalize/{id}")
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@Operation(summary = "Undo the finalization of a plan by id (only possible if it is not already deposited)")
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@OperationWithTenantHeader(summary = "Undo the finalization of a plan by id (only possible if it is not already deposited)")
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@Swagger404
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@Transactional
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public boolean undoFinalize(
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@ -269,7 +279,7 @@ public class DmpController {
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}
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@GetMapping("validate/{id}")
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||||
@Operation(summary = "Validate if a plan is ready for finalization by id")
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||||
@OperationWithTenantHeader(summary = "Validate if a plan is ready for finalization by id")
|
||||
@Hidden
|
||||
public DmpValidationResult validate(@PathVariable("id") UUID id) throws MyApplicationException, MyForbiddenException, MyNotFoundException, InvalidApplicationException {
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||||
logger.debug(new MapLogEntry("validating" + Dmp.class.getSimpleName()).And("id", id));
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||||
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@ -286,7 +296,7 @@ public class DmpController {
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}
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@PostMapping("clone")
|
||||
@Operation(summary = "Create a clone of an existing plan")
|
||||
@OperationWithTenantHeader(summary = "Create a clone of an existing plan")
|
||||
@Swagger400
|
||||
@Swagger404
|
||||
@Transactional
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||||
|
|
@ -310,7 +320,7 @@ public class DmpController {
|
|||
}
|
||||
|
||||
@PostMapping("new-version")
|
||||
@Operation(summary = "Create a new version of an existing plan")
|
||||
@OperationWithTenantHeader(summary = "Create a new version of an existing plan")
|
||||
@Swagger400
|
||||
@Swagger404
|
||||
@Transactional
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||||
|
|
@ -332,7 +342,7 @@ public class DmpController {
|
|||
}
|
||||
|
||||
@PostMapping("{id}/assign-users")
|
||||
@Operation(summary = "Assign users to the plan by id")
|
||||
@OperationWithTenantHeader(summary = "Assign users to the plan by id")
|
||||
@Transactional
|
||||
@ValidationFilterAnnotation(validator = DmpUserPersist.DmpUserPersistValidator.ValidatorName, argumentName = "model")
|
||||
@Hidden
|
||||
|
|
@ -350,7 +360,7 @@ public class DmpController {
|
|||
}
|
||||
|
||||
@PostMapping("remove-user")
|
||||
@Operation(summary = "Remove a user association with the plan")
|
||||
@OperationWithTenantHeader(summary = "Remove a user association with the plan")
|
||||
@Transactional
|
||||
@ValidationFilterAnnotation(validator = DmpUserRemovePersist.DmpUserRemovePersistValidator.ValidatorName, argumentName = "model")
|
||||
@Hidden
|
||||
|
|
@ -368,7 +378,7 @@ public class DmpController {
|
|||
}
|
||||
|
||||
@GetMapping("{id}/export/{transformerId}/{type}")
|
||||
@Operation(summary = "Export a plan in various formats by id")
|
||||
@OperationWithTenantHeader(summary = "Export a plan in various formats by id")
|
||||
@Swagger404
|
||||
public ResponseEntity<byte[]> export(
|
||||
@Parameter(name = "id", description = "The id of a plan to export", example = "c0c163dc-2965-45a5-9608-f76030578609", required = true) @PathVariable("id") UUID id,
|
||||
|
|
@ -387,7 +397,7 @@ public class DmpController {
|
|||
}
|
||||
|
||||
@PostMapping("{id}/invite-users")
|
||||
@Operation(summary = "Send user invitations for the plan by id")
|
||||
@OperationWithTenantHeader(summary = "Send user invitations for the plan by id")
|
||||
@Transactional
|
||||
@ValidationFilterAnnotation(validator = DmpUserInvitePersist.DmpUserInvitePersistValidator.ValidatorName, argumentName = "model")
|
||||
@Hidden
|
||||
|
|
@ -404,7 +414,7 @@ public class DmpController {
|
|||
}
|
||||
|
||||
@GetMapping("{id}/token/{token}/invite-accept")
|
||||
@Operation(summary = "Accept an invitation token for a plan by id")
|
||||
@OperationWithTenantHeader(summary = "Accept an invitation token for a plan by id")
|
||||
@Transactional
|
||||
@Hidden
|
||||
public boolean acceptInvitation(@PathVariable("id") UUID id, @PathVariable("token") String token) throws InvalidApplicationException, JAXBException, IOException {
|
||||
|
|
@ -420,7 +430,7 @@ public class DmpController {
|
|||
}
|
||||
|
||||
@RequestMapping(method = RequestMethod.GET, value = "/xml/export/{id}", produces = "application/xml")
|
||||
@Operation(summary = "Export a plan in xml format by id")
|
||||
@OperationWithTenantHeader(summary = "Export a plan in xml format by id")
|
||||
@Swagger404
|
||||
public @ResponseBody ResponseEntity<byte[]> getXml(
|
||||
@Parameter(name = "id", description = "The id of a plan to export", example = "c0c163dc-2965-45a5-9608-f76030578609", required = true) @PathVariable UUID id
|
||||
|
|
@ -436,7 +446,7 @@ public class DmpController {
|
|||
}
|
||||
|
||||
@RequestMapping(method = RequestMethod.POST, value = "/xml/import")
|
||||
@Operation(summary = "Import a plan from an xml file")
|
||||
@OperationWithTenantHeader(summary = "Import a plan from an xml file")
|
||||
@Transactional
|
||||
public Dmp importXml(
|
||||
@RequestParam("file") MultipartFile file,
|
||||
|
|
@ -455,7 +465,7 @@ public class DmpController {
|
|||
}
|
||||
|
||||
@PostMapping("json/preprocessing")
|
||||
@Operation(summary = "preprocessing a plan from an json file")
|
||||
@OperationWithTenantHeader(summary = "preprocessing a plan from an json file")
|
||||
@Transactional
|
||||
public PreprocessingDmpModel preprocessing(
|
||||
@RequestParam("fileId") UUID fileId,
|
||||
|
|
@ -474,7 +484,7 @@ public class DmpController {
|
|||
}
|
||||
|
||||
@PostMapping("json/import")
|
||||
@Operation(summary = "Import a plan from an json file")
|
||||
@OperationWithTenantHeader(summary = "Import a plan from an json file")
|
||||
@ValidationFilterAnnotation(validator = DmpCommonModelConfig.DmpCommonModelConfigValidator.ValidatorName, argumentName = "model")
|
||||
@Transactional
|
||||
public Dmp importJson(
|
||||
|
|
|
|||
|
|
@ -0,0 +1,48 @@
|
|||
package org.opencdmp.controllers.swagger.annotation;
|
||||
|
||||
import io.swagger.v3.oas.annotations.ExternalDocumentation;
|
||||
import io.swagger.v3.oas.annotations.Operation;
|
||||
import io.swagger.v3.oas.annotations.Parameter;
|
||||
import io.swagger.v3.oas.annotations.enums.ParameterIn;
|
||||
import io.swagger.v3.oas.annotations.extensions.Extension;
|
||||
import io.swagger.v3.oas.annotations.media.Schema;
|
||||
import io.swagger.v3.oas.annotations.parameters.RequestBody;
|
||||
import io.swagger.v3.oas.annotations.responses.ApiResponse;
|
||||
import io.swagger.v3.oas.annotations.security.SecurityRequirement;
|
||||
import io.swagger.v3.oas.annotations.servers.Server;
|
||||
import org.springframework.core.annotation.AliasFor;
|
||||
|
||||
import java.lang.annotation.*;
|
||||
|
||||
@Documented
|
||||
@Retention(RetentionPolicy.RUNTIME)
|
||||
@Target({ElementType.TYPE, ElementType.FIELD, ElementType.METHOD})
|
||||
@Operation
|
||||
public @interface OperationWithTenantHeader {
|
||||
@AliasFor(annotation = Operation.class, attribute = "method") String method() default "";
|
||||
@AliasFor(annotation = Operation.class, attribute = "tags") String[] tags() default {};
|
||||
@AliasFor(annotation = Operation.class, attribute = "summary") String summary() default "";
|
||||
@AliasFor(annotation = Operation.class, attribute = "description") String description() default "";
|
||||
@AliasFor(annotation = Operation.class, attribute = "requestBody") RequestBody requestBody() default @RequestBody;
|
||||
@AliasFor(annotation = Operation.class, attribute = "externalDocs") ExternalDocumentation externalDocs() default @ExternalDocumentation;
|
||||
@AliasFor(annotation = Operation.class, attribute = "operationId") String operationId() default "";
|
||||
@AliasFor(annotation = Operation.class, attribute = "parameters") Parameter[] parameters() default {
|
||||
@Parameter(
|
||||
name = "x-tenant",
|
||||
description = "This is a header containing the tenant scope of the request. " +
|
||||
"It is required on every authenticated request. " +
|
||||
"If the request does not target a specific tenant resource, this header should be set to the value 'default'.",
|
||||
required = true,
|
||||
in = ParameterIn.HEADER,
|
||||
schema = @Schema(implementation = String.class),
|
||||
example = "default"
|
||||
)
|
||||
};
|
||||
@AliasFor(annotation = Operation.class, attribute = "responses") ApiResponse[] responses() default {};
|
||||
@AliasFor(annotation = Operation.class, attribute = "deprecated") boolean deprecated() default false;
|
||||
@AliasFor(annotation = Operation.class, attribute = "security") SecurityRequirement[] security() default {};
|
||||
@AliasFor(annotation = Operation.class, attribute = "servers") Server[] servers() default {};
|
||||
@AliasFor(annotation = Operation.class, attribute = "extensions") Extension[] extensions() default {};
|
||||
@AliasFor(annotation = Operation.class, attribute = "hidden") boolean hidden() default false;
|
||||
@AliasFor(annotation = Operation.class, attribute = "ignoreJsonView") boolean ignoreJsonView() default false;
|
||||
}
|
||||
|
|
@ -7,6 +7,6 @@ import java.lang.annotation.*;
|
|||
@Target({ElementType.TYPE, ElementType.FIELD, ElementType.METHOD})
|
||||
@Swagger500
|
||||
@Swagger403
|
||||
public @interface SwaggerErrorResponses {
|
||||
public @interface SwaggerCommonErrorResponses {
|
||||
|
||||
}
|
||||
|
|
@ -12,13 +12,17 @@ import Admonition from '@theme/Admonition';
|
|||
The swagger UI is available at the `/swagger-ui/index.html` url. It contains documentation for the following API endpoints.
|
||||
|
||||
<Tabs>
|
||||
<TabItem value="public" label="Public API">
|
||||
<TabItem value="public" label="Legacy">
|
||||
|
||||
- **/api/public/dmps/\*\***
|
||||
- **/api/public/descriptions/\*\***
|
||||
|
||||
<Admonition type="info">
|
||||
<p>These endpoints do not require authentication.</p>
|
||||
</Admonition>
|
||||
|
||||
</TabItem>
|
||||
<TabItem value="internal" label="Internal API">
|
||||
<TabItem value="internal" label="Current">
|
||||
|
||||
- **/api/dmp/\*\***
|
||||
- **/api/description/\*\***
|
||||
|
|
|
|||
Loading…
Reference in New Issue