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Merge branch 'ui-refactoring' of https://gitlab.eudat.eu/dmp/OpenAIRE-EUDAT-DMP-service-pilot into ui-refactoring

This commit is contained in:
Diamantis Tziotzios 2019-01-29 18:33:23 +02:00
parent 528e5279c8 d5740a560c
commit 68610bda1b
17 changed files with 72 additions and 293 deletions
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1
dmp-backend/108131ae-d07a-4e8c-8f75-8c8e33fe9974.xml
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1
dmp-backend/7b1bdf71-945e-40db-b8fb-1b2d313fbebe.xml
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@ -1 +0,0 @@
<?xml version="1.0" encoding="UTF-8"?><root><dmp><dmpName>DMP Demodfgdfg</dmpName><projectName>OpenAIREplus</projectName><organisations><organisation name="Nord University" reference="organizationrepo:cristin/204"/><organisation name="Hanne Moa" reference="personrepo:orcid-sandbox/0000-0003-2050-142X"/></organisations><researchers/><datasets/></dmp></root>

1
dmp-backend/be3facf6-0eb9-4668-99d6-f99215ccec1b.xml
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22
dmp-backend/queryengine/pom.xml
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@ -1,22 +0,0 @@
<?xml version="1.0" encoding="UTF-8"?>
<project xmlns="http://maven.apache.org/POM/4.0.0"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
<parent>
<artifactId>dmp-backend</artifactId>
<groupId>eu.eudat</groupId>
<version>1.0.0-SNAPSHOT</version>
</parent>
<modelVersion>4.0.0</modelVersion>
<artifactId>query-engine</artifactId>
<dependencies>
<dependency>
<groupId>eu.eudat</groupId>
<artifactId>data</artifactId>
<version>1.0-SNAPSHOT</version>
</dependency>
</dependencies>
</project>

23
dmp-backend/queryengine/src/main/java/Main.java
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@ -1,23 +0,0 @@
import eu.eudat.data.entities.DataRepository;
import eu.eudat.query.engine.builder.QueryBuilder;
import eu.eudat.query.engine.builder.QueryBuilderImpl;
import eu.eudat.query.engine.predicates.ComparisonPredicate;
/**
* Created by ikalyvas on 7/5/2018.
*/
public class Main {
public static void main(String[] args){
new Main().Test();
}
public void Test(){
QueryBuilder<DataRepository> queryBuilder = new QueryBuilderImpl<>(DataRepository.class);
queryBuilder.<ComparisonPredicate>where((comparisonExpression) -> comparisonExpression.field("id").greaterThan(5) );
queryBuilder.<ComparisonPredicate>where((comparisonExpression) -> comparisonExpression.field("label").equal("mitsos") );
queryBuilder.toList();
QueryBuilder<DataRepository> queryBuilder2 = new QueryBuilderImpl<>(DataRepository.class);
queryBuilder2.<ComparisonPredicate>where((comparisonExpression) -> comparisonExpression.field("id").lessOrEqualThan(11111) );
queryBuilder2.toList();
}
}

16
dmp-backend/queryengine/src/main/java/eu/eudat/query/engine/builder/QueryBuilder.java
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@ -1,16 +0,0 @@
package eu.eudat.query.engine.builder;
import eu.eudat.query.engine.expressions.Expression;
import eu.eudat.query.engine.predicates.Predicate;
import java.util.List;
/**
* Created by ikalyvas on 7/5/2018.
*/
public interface QueryBuilder<T> {
<P extends Predicate> Expression where(P wherePredicate);
List<T> toList();
}

50
dmp-backend/queryengine/src/main/java/eu/eudat/query/engine/builder/QueryBuilderImpl.java
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@ -1,50 +0,0 @@
package eu.eudat.query.engine.builder;
import eu.eudat.query.engine.expressions.ComparisonExpression;
import eu.eudat.query.engine.expressions.Expression;
import eu.eudat.query.engine.predicates.Predicate;
import java.lang.annotation.Annotation;
import java.util.Arrays;
import java.util.LinkedList;
import java.util.List;
import java.util.Optional;
/**
* Created by ikalyvas on 7/5/2018.
*/
public class QueryBuilderImpl<T> implements QueryBuilder<T> {
private List<Expression> expressions = new LinkedList<>();
private Class<T> tClass;
public QueryBuilderImpl(Class<T> tClass) {
this.tClass = tClass;
}
@Override
public <P extends Predicate> Expression where(P wherePredicate) {
ComparisonExpression comparisonExpression = new ComparisonExpression();
Expression expression = wherePredicate.apply(comparisonExpression);
this.expressions.add(expression);
return expression;
}
@Override
public List<T> toList() {
String query = "Select * from ";
Optional<Annotation> optionalAnnotation = Arrays.stream(this.tClass.getAnnotations())
.filter(x-> x.annotationType().equals(javax.persistence.Table.class))
.findFirst();
javax.persistence.Table annotation = optionalAnnotation.isPresent() ? (javax.persistence.Table)optionalAnnotation.get() : null;
query += annotation.name()+" ";
for (Expression expression : expressions) {
if(expressions.indexOf(expression) > 0) query+= " and ";
else query += " where ";
query += expression.evaluate();
}
System.out.println(query);
return null;
}
}

17
dmp-backend/queryengine/src/main/java/eu/eudat/query/engine/expressions/AbstractFieldExpression.java
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@ -1,17 +0,0 @@
package eu.eudat.query.engine.expressions;
/**
* Created by ikalyvas on 7/5/2018.
*/
public abstract class AbstractFieldExpression<T extends AbstractFieldExpression<T>> {
private String field;
protected String getField() {
return field;
}
public T field(String field) {
this.field = field;
return (T)this;
}
}

47
dmp-backend/queryengine/src/main/java/eu/eudat/query/engine/expressions/ComparisonExpression.java
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@ -1,47 +0,0 @@
package eu.eudat.query.engine.expressions;
import eu.eudat.query.engine.types.expression.comparison.ComparisonExpressionType;
/**
* Created by ikalyvas on 7/5/2018.
*/
public class ComparisonExpression extends AbstractFieldExpression<ComparisonExpression> implements Expression {
private ComparisonExpressionType type;
private Object value;
public <T> Expression greaterThan(T value){
this.value = value;
this.type = ComparisonExpressionType.GREATER_THAN;
return this;
}
public <T> Expression greaterThanOrEqual(T value){
this.value = value;
this.type = ComparisonExpressionType.GREATER_OR_EQUAL_THAN;
return this;
}
public <T> Expression equal(T value){
this.value = value;
this.type = ComparisonExpressionType.EQUAL;
return this;
}
public <T> Expression lessThan(T value){
this.value = value;
this.type = ComparisonExpressionType.LESS_THAN;
return this;
}
public <T> Expression lessOrEqualThan(T value){
this.value = value;
this.type = ComparisonExpressionType.LESS_OR_EQUAL_THAN;
return this;
}
@Override
public String evaluate() {
return this.getField() +" " + type.toString() + " " + value ;
}
}

8
dmp-backend/queryengine/src/main/java/eu/eudat/query/engine/expressions/Expression.java
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@ -1,8 +0,0 @@
package eu.eudat.query.engine.expressions;
/**
* Created by ikalyvas on 7/5/2018.
*/
public interface Expression {
String evaluate();
}

10
dmp-backend/queryengine/src/main/java/eu/eudat/query/engine/predicates/ComparisonPredicate.java
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@ -1,10 +0,0 @@
package eu.eudat.query.engine.predicates;
import eu.eudat.query.engine.expressions.ComparisonExpression;
import eu.eudat.query.engine.expressions.Expression;
/**
* Created by ikalyvas on 7/5/2018.
*/
public interface ComparisonPredicate extends Predicate<ComparisonExpression> {
}

11
dmp-backend/queryengine/src/main/java/eu/eudat/query/engine/predicates/Predicate.java
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@ -1,11 +0,0 @@
package eu.eudat.query.engine.predicates;
import eu.eudat.query.engine.expressions.ComparisonExpression;
import eu.eudat.query.engine.expressions.Expression;
/**
* Created by ikalyvas on 7/5/2018.
*/
public interface Predicate<E extends Expression> {
Expression apply( E expression);
}

8
dmp-backend/queryengine/src/main/java/eu/eudat/query/engine/types/expression/comparison/ComparisonExpressionType.java
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@ -1,8 +0,0 @@
package eu.eudat.query.engine.types.expression.comparison;
/**
* Created by ikalyvas on 7/5/2018.
*/
public enum ComparisonExpressionType {
EQUAL, GREATER_THAN, GREATER_OR_EQUAL_THAN, LESS_THAN, LESS_OR_EQUAL_THAN
}

42
dmp-backend/web/src/main/java/eu/eudat/controllers/DMPs.java
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@ -46,72 +46,66 @@ public class DMPs extends BaseController {
private DynamicProjectConfiguration dynamicProjectConfiguration; private DynamicProjectConfiguration dynamicProjectConfiguration;
private Environment environment; private Environment environment;
private DataManagementPlanManager dataManagementPlanManager;
@Autowired @Autowired
public DMPs(ApiContext apiContext, DynamicProjectConfiguration dynamicProjectConfiguration, Environment environment) { public DMPs(ApiContext apiContext, DynamicProjectConfiguration dynamicProjectConfiguration, Environment environment, DataManagementPlanManager dataManagementPlanManager) {
super(apiContext); super(apiContext);
this.dynamicProjectConfiguration = dynamicProjectConfiguration; this.dynamicProjectConfiguration = dynamicProjectConfiguration;
this.environment = environment; this.environment = environment;
this.dataManagementPlanManager = dataManagementPlanManager;
} }
@Transactional @Transactional
@RequestMapping(method = RequestMethod.GET, value = {"{id}/unlock"}, produces = "application/json") @RequestMapping(method = RequestMethod.GET, value = {"{id}/unlock"}, produces = "application/json")
public @ResponseBody public @ResponseBody
ResponseEntity<ResponseItem<DMP>> unlock(@PathVariable(value = "id") UUID id, Principal principal) throws Exception { ResponseEntity<ResponseItem<DMP>> unlock(@PathVariable(value = "id") UUID id, Principal principal) throws Exception {
new DataManagementPlanManager().unlock(this.getApiContext(), id); this.dataManagementPlanManager.unlock(this.getApiContext(), id);
return ResponseEntity.status(HttpStatus.OK).body(new ResponseItem<DMP>().status(ApiMessageCode.SUCCESS_MESSAGE).message("Unlocked")); return ResponseEntity.status(HttpStatus.OK).body(new ResponseItem<DMP>().status(ApiMessageCode.SUCCESS_MESSAGE).message("Unlocked"));
} }
@RequestMapping(method = RequestMethod.POST, value = {"/getPaged"}, consumes = "application/json", produces = "application/json") @RequestMapping(method = RequestMethod.POST, value = {"/paged"}, consumes = "application/json", produces = "application/json")
public @ResponseBody public @ResponseBody
ResponseEntity<ResponseItem<DataTableData<DataManagementPlanListingModel>>> getPaged(@Valid @RequestBody DataManagementPlanTableRequest dataManagementPlanTableRequest, Principal principal) throws Exception { ResponseEntity<ResponseItem<DataTableData<DataManagementPlanListingModel>>> getPaged(@Valid @RequestBody DataManagementPlanTableRequest dataManagementPlanTableRequest, Principal principal) throws Exception {
DataTableData<DataManagementPlanListingModel> dataTable = new DataManagementPlanManager().getPaged(this.getApiContext(), dataManagementPlanTableRequest, principal); DataTableData<DataManagementPlanListingModel> dataTable = this.dataManagementPlanManager.getPaged(this.getApiContext(), dataManagementPlanTableRequest, principal);
return ResponseEntity.status(HttpStatus.OK).body(new ResponseItem<DataTableData<DataManagementPlanListingModel>>().status(ApiMessageCode.NO_MESSAGE).payload(dataTable)); return ResponseEntity.status(HttpStatus.OK).body(new ResponseItem<DataTableData<DataManagementPlanListingModel>>().status(ApiMessageCode.NO_MESSAGE).payload(dataTable));
} }
@RequestMapping(method = RequestMethod.GET, value = {"/getSingle/{id}"}, produces = "application/json") @RequestMapping(method = RequestMethod.GET, value = {"{id}"}, produces = "application/json")
public @ResponseBody public @ResponseBody
ResponseEntity<ResponseItem<DataManagementPlan>> getSingle(@PathVariable String id, Principal principal) throws IllegalAccessException, InstantiationException { ResponseEntity<ResponseItem<DataManagementPlan>> getSingle(@PathVariable String id, Principal principal) throws IllegalAccessException, InstantiationException {
eu.eudat.models.data.dmp.DataManagementPlan dataManagementPlan = new DataManagementPlanManager().getSingle(this.getApiContext().getOperationsContext().getDatabaseRepository().getDmpDao(), id, principal, this.dynamicProjectConfiguration); eu.eudat.models.data.dmp.DataManagementPlan dataManagementPlan = this.dataManagementPlanManager.getSingle(this.getApiContext().getOperationsContext().getDatabaseRepository().getDmpDao(), id, principal, this.dynamicProjectConfiguration);
return ResponseEntity.status(HttpStatus.OK).body(new ResponseItem<DataManagementPlan>().status(ApiMessageCode.NO_MESSAGE).payload(dataManagementPlan)); return ResponseEntity.status(HttpStatus.OK).body(new ResponseItem<DataManagementPlan>().status(ApiMessageCode.NO_MESSAGE).payload(dataManagementPlan));
} }
@Transactional @Transactional
@RequestMapping(method = RequestMethod.POST, value = {"/createOrUpdate"}, consumes = "application/json", produces = "application/json") @RequestMapping(method = RequestMethod.POST, value = {"/post"}, consumes = "application/json", produces = "application/json")
public @ResponseBody public @ResponseBody
ResponseEntity<ResponseItem<DMP>> createOrUpdate(@RequestBody eu.eudat.models.data.dmp.DataManagementPlan dataManagementPlan, Principal principal) throws Exception { ResponseEntity<ResponseItem<DMP>> createOrUpdate(@RequestBody eu.eudat.models.data.dmp.DataManagementPlan dataManagementPlan, Principal principal) throws Exception {
DataManagementPlanManager.createOrUpdate(this.getApiContext(), dataManagementPlan, principal); this.dataManagementPlanManager.createOrUpdate(this.getApiContext(), dataManagementPlan, principal);
return ResponseEntity.status(HttpStatus.OK).body(new ResponseItem<DMP>().status(ApiMessageCode.SUCCESS_MESSAGE).message("Created")); return ResponseEntity.status(HttpStatus.OK).body(new ResponseItem<DMP>().status(ApiMessageCode.SUCCESS_MESSAGE).message("Created"));
} }
@RequestMapping(method = RequestMethod.POST, value = {"/new/{id}"}, consumes = "application/json", produces = "application/json") @RequestMapping(method = RequestMethod.POST, value = {"/new/{id}"}, consumes = "application/json", produces = "application/json")
public @ResponseBody public @ResponseBody
ResponseEntity<ResponseItem<DMP>> newVersion(@PathVariable UUID id, @Valid @RequestBody eu.eudat.models.data.dmp.DataManagementPlanNewVersionModel dataManagementPlan, Principal principal) throws Exception { ResponseEntity<ResponseItem<DMP>> newVersion(@PathVariable UUID id, @Valid @RequestBody eu.eudat.models.data.dmp.DataManagementPlanNewVersionModel dataManagementPlan, Principal principal) throws Exception {
DataManagementPlanManager.newVersion(this.getApiContext(), id, dataManagementPlan, principal); this.dataManagementPlanManager.newVersion(this.getApiContext(), id, dataManagementPlan, principal);
return ResponseEntity.status(HttpStatus.OK).body(new ResponseItem<DMP>().status(ApiMessageCode.NO_MESSAGE)); return ResponseEntity.status(HttpStatus.OK).body(new ResponseItem<DMP>().status(ApiMessageCode.NO_MESSAGE));
} }
@RequestMapping(method = RequestMethod.POST, value = {"/clone/{id}"}, consumes = "application/json", produces = "application/json") @RequestMapping(method = RequestMethod.POST, value = {"/clone/{id}"}, consumes = "application/json", produces = "application/json")
public @ResponseBody public @ResponseBody
ResponseEntity<ResponseItem<DMP>> clone(@PathVariable UUID id, @RequestBody eu.eudat.models.data.dmp.DataManagementPlanNewVersionModel dataManagementPlan, Principal principal) throws Exception { ResponseEntity<ResponseItem<DMP>> clone(@PathVariable UUID id, @RequestBody eu.eudat.models.data.dmp.DataManagementPlanNewVersionModel dataManagementPlan, Principal principal) throws Exception {
DataManagementPlanManager.clone(this.getApiContext(), id, dataManagementPlan, principal); this.dataManagementPlanManager.clone(this.getApiContext(), id, dataManagementPlan, principal);
return ResponseEntity.status(HttpStatus.OK).body(new ResponseItem<DMP>().status(ApiMessageCode.NO_MESSAGE)); return ResponseEntity.status(HttpStatus.OK).body(new ResponseItem<DMP>().status(ApiMessageCode.NO_MESSAGE));
} }
@RequestMapping(method = RequestMethod.POST, value = {"/get"}, consumes = "application/json", produces = "application/json")
public @ResponseBody
ResponseEntity<ResponseItem<List<DataManagementPlan>>> getWithCriteria(@RequestBody DataManagementPlanCriteriaRequest dataManagementPlanCriteria, Principal principal) throws InstantiationException, IllegalAccessException {
List<DataManagementPlan> dataTable = new DataManagementPlanManager().getWithCriteria(this.getApiContext().getOperationsContext().getDatabaseRepository().getDmpDao(), dataManagementPlanCriteria, principal);
return ResponseEntity.status(HttpStatus.OK).body(new ResponseItem<List<DataManagementPlan>>().status(ApiMessageCode.NO_MESSAGE).payload(dataTable));
}
@Transactional @Transactional
@RequestMapping(method = RequestMethod.DELETE, value = {"/delete/{id}"}, consumes = "application/json", produces = "application/json") @RequestMapping(method = RequestMethod.DELETE, value = {"{id}"}, consumes = "application/json", produces = "application/json")
public @ResponseBody public @ResponseBody
ResponseEntity<ResponseItem<DMP>> delete(@PathVariable UUID id, Principal principal) { ResponseEntity<ResponseItem<DMP>> delete(@PathVariable UUID id, Principal principal) {
try{ try{
DataManagementPlanManager.delete(this.getApiContext(), id); this.dataManagementPlanManager.delete(this.getApiContext(), id);
return ResponseEntity.status(HttpStatus.OK).body(new ResponseItem<DMP>().status(ApiMessageCode.SUCCESS_MESSAGE).message("Successfully Deleted Datamanagement Plan")); return ResponseEntity.status(HttpStatus.OK).body(new ResponseItem<DMP>().status(ApiMessageCode.SUCCESS_MESSAGE).message("Successfully Deleted Datamanagement Plan"));
}catch (DMPWithDatasetsDeleteException exception){ }catch (DMPWithDatasetsDeleteException exception){
return ResponseEntity.status(HttpStatus.BAD_REQUEST).body(new ResponseItem<DMP>().status(ApiMessageCode.ERROR_MESSAGE).message(exception.getMessage())); return ResponseEntity.status(HttpStatus.BAD_REQUEST).body(new ResponseItem<DMP>().status(ApiMessageCode.ERROR_MESSAGE).message(exception.getMessage()));
@ -122,14 +116,14 @@ public class DMPs extends BaseController {
@RequestMapping(method = RequestMethod.POST, value = {"/dynamic"}, consumes = "application/json", produces = "application/json") @RequestMapping(method = RequestMethod.POST, value = {"/dynamic"}, consumes = "application/json", produces = "application/json")
public @ResponseBody public @ResponseBody
ResponseEntity<ResponseItem<List<Tuple<String, String>>>> getWithCriteria(@RequestBody RequestItem<DynamicFieldsCriteria> criteriaRequestItem, Principal principal) throws InstantiationException, IllegalAccessException { ResponseEntity<ResponseItem<List<Tuple<String, String>>>> getWithCriteria(@RequestBody RequestItem<DynamicFieldsCriteria> criteriaRequestItem, Principal principal) throws InstantiationException, IllegalAccessException {
List<Tuple<String, String>> dataTable = new DataManagementPlanManager().getDynamicFields(criteriaRequestItem.getCriteria().getId(), this.dynamicProjectConfiguration, criteriaRequestItem.getCriteria()); List<Tuple<String, String>> dataTable = this.dataManagementPlanManager.getDynamicFields(criteriaRequestItem.getCriteria().getId(), this.dynamicProjectConfiguration, criteriaRequestItem.getCriteria());
return ResponseEntity.status(HttpStatus.OK).body(new ResponseItem<List<Tuple<String, String>>>().status(ApiMessageCode.NO_MESSAGE).payload(dataTable)); return ResponseEntity.status(HttpStatus.OK).body(new ResponseItem<List<Tuple<String, String>>>().status(ApiMessageCode.NO_MESSAGE).payload(dataTable));
} }
@RequestMapping(method = RequestMethod.GET, value = {"/getXml/{id}"}) @RequestMapping(method = RequestMethod.GET, value = {"/getXml/{id}"})
public @ResponseBody public @ResponseBody
ResponseEntity<byte[]> getXml(@PathVariable String id) throws IllegalAccessException, IOException, InstantiationException { ResponseEntity<byte[]> getXml(@PathVariable String id) throws IllegalAccessException, IOException, InstantiationException {
FileEnvelope envelope = new DataManagementPlanManager().getXmlDocument(this.getApiContext().getOperationsContext().getDatabaseRepository().getDmpDao(), id, this.getApiContext().getUtilitiesService().getVisibilityRuleService()); FileEnvelope envelope = this.dataManagementPlanManager.getXmlDocument(this.getApiContext().getOperationsContext().getDatabaseRepository().getDmpDao(), id, this.getApiContext().getUtilitiesService().getVisibilityRuleService());
InputStream resource = new FileInputStream(envelope.getFile()); InputStream resource = new FileInputStream(envelope.getFile());
System.out.println("Mime Type of " + envelope.getFilename() + " is " + System.out.println("Mime Type of " + envelope.getFilename() + " is " +
new MimetypesFileTypeMap().getContentType(envelope.getFile())); new MimetypesFileTypeMap().getContentType(envelope.getFile()));
@ -149,7 +143,7 @@ public class DMPs extends BaseController {
@RequestMapping(method = RequestMethod.GET, value = {"/getWord/{id}"}) @RequestMapping(method = RequestMethod.GET, value = {"/getWord/{id}"})
public @ResponseBody public @ResponseBody
ResponseEntity<byte[]> getWordDocument(@PathVariable String id) throws IOException, IllegalAccessException, InstantiationException { ResponseEntity<byte[]> getWordDocument(@PathVariable String id) throws IOException, IllegalAccessException, InstantiationException {
File file = new DataManagementPlanManager().getWordDocument(this.environment, this.getApiContext().getOperationsContext().getDatabaseRepository().getDmpDao(), id, this.getApiContext().getUtilitiesService().getVisibilityRuleService()); File file = this.dataManagementPlanManager.getWordDocument(this.environment, this.getApiContext().getOperationsContext().getDatabaseRepository().getDmpDao(), id, this.getApiContext().getUtilitiesService().getVisibilityRuleService());
InputStream resource = new FileInputStream(file); InputStream resource = new FileInputStream(file);
System.out.println("Mime Type of " + file.getName() + " is " + System.out.println("Mime Type of " + file.getName() + " is " +
new MimetypesFileTypeMap().getContentType(file)); new MimetypesFileTypeMap().getContentType(file));
@ -169,7 +163,7 @@ public class DMPs extends BaseController {
@RequestMapping(method = RequestMethod.GET, value = {"/getPDF/{id}"}) @RequestMapping(method = RequestMethod.GET, value = {"/getPDF/{id}"})
public @ResponseBody public @ResponseBody
ResponseEntity<byte[]> getPDFDocument(@PathVariable String id) throws IllegalAccessException, IOException, InstantiationException, InterruptedException { ResponseEntity<byte[]> getPDFDocument(@PathVariable String id) throws IllegalAccessException, IOException, InstantiationException, InterruptedException {
File file = new DataManagementPlanManager().getWordDocument(this.environment, this.getApiContext().getOperationsContext().getDatabaseRepository().getDmpDao(), id, this.getApiContext().getUtilitiesService().getVisibilityRuleService()); File file = this.dataManagementPlanManager.getWordDocument(this.environment, this.getApiContext().getOperationsContext().getDatabaseRepository().getDmpDao(), id, this.getApiContext().getUtilitiesService().getVisibilityRuleService());
File pdffile = new DatasetManager().convertToPDF(file, environment, file.getName()); File pdffile = new DatasetManager().convertToPDF(file, environment, file.getName());
InputStream resource = new FileInputStream(pdffile); InputStream resource = new FileInputStream(pdffile);
System.out.println("Mime Type of " + file.getName() + " is " + System.out.println("Mime Type of " + file.getName() + " is " +

20
dmp-backend/web/src/main/java/eu/eudat/logic/managers/DataManagementPlanManager.java
View File

@ -36,6 +36,7 @@ import org.apache.poi.xwpf.usermodel.XWPFDocument;
import org.json.JSONObject; import org.json.JSONObject;
import org.springframework.core.env.Environment; import org.springframework.core.env.Environment;
import org.springframework.http.*; import org.springframework.http.*;
import org.springframework.stereotype.Component;
import org.springframework.web.client.RestTemplate; import org.springframework.web.client.RestTemplate;
import org.w3c.dom.Document; import org.w3c.dom.Document;
import org.w3c.dom.Element; import org.w3c.dom.Element;
@ -48,6 +49,7 @@ import java.util.*;
import java.util.concurrent.CompletableFuture; import java.util.concurrent.CompletableFuture;
import java.util.stream.Collectors; import java.util.stream.Collectors;
@Component
public class DataManagementPlanManager { public class DataManagementPlanManager {
public DataTableData<DataManagementPlanListingModel> getPaged(ApiContext apiContext, DataManagementPlanTableRequest dataManagementPlanTableRequest, Principal principal) throws Exception { public DataTableData<DataManagementPlanListingModel> getPaged(ApiContext apiContext, DataManagementPlanTableRequest dataManagementPlanTableRequest, Principal principal) throws Exception {
@ -208,7 +210,7 @@ public class DataManagementPlanManager {
return result; return result;
} }
public static void createOrUpdate(ApiContext apiContext, DataManagementPlan dataManagementPlan, Principal principal) throws Exception { public void createOrUpdate(ApiContext apiContext, DataManagementPlan dataManagementPlan, Principal principal) throws Exception {
DMP newDmp = dataManagementPlan.toDataModel(); DMP newDmp = dataManagementPlan.toDataModel();
createOrganisationsIfTheyDontExist(newDmp, apiContext.getOperationsContext().getDatabaseRepository().getOrganisationDao()); createOrganisationsIfTheyDontExist(newDmp, apiContext.getOperationsContext().getDatabaseRepository().getOrganisationDao());
createResearchersIfTheyDontExist(newDmp, apiContext.getOperationsContext().getDatabaseRepository().getResearcherDao()); createResearchersIfTheyDontExist(newDmp, apiContext.getOperationsContext().getDatabaseRepository().getResearcherDao());
@ -226,7 +228,7 @@ public class DataManagementPlanManager {
assignUser(newDmp, user, apiContext); assignUser(newDmp, user, apiContext);
} }
public static void assignUser(DMP dmp, UserInfo userInfo, ApiContext apiContext) { public void assignUser(DMP dmp, UserInfo userInfo, ApiContext apiContext) {
UserDMP userDMP = new UserDMP(); UserDMP userDMP = new UserDMP();
userDMP.setDmp(dmp); userDMP.setDmp(dmp);
userDMP.setUser(userInfo); userDMP.setUser(userInfo);
@ -234,7 +236,7 @@ public class DataManagementPlanManager {
apiContext.getOperationsContext().getDatabaseRepository().getUserDmpDao().createOrUpdate(userDMP); apiContext.getOperationsContext().getDatabaseRepository().getUserDmpDao().createOrUpdate(userDMP);
} }
public static void newVersion(ApiContext apiContext, UUID uuid, DataManagementPlanNewVersionModel dataManagementPlan, Principal principal) throws Exception { public void newVersion(ApiContext apiContext, UUID uuid, DataManagementPlanNewVersionModel dataManagementPlan, Principal principal) throws Exception {
DMP oldDmp = apiContext.getOperationsContext().getDatabaseRepository().getDmpDao().find(uuid); DMP oldDmp = apiContext.getOperationsContext().getDatabaseRepository().getDmpDao().find(uuid);
DMP newDmp = dataManagementPlan.toDataModel(); DMP newDmp = dataManagementPlan.toDataModel();
createOrganisationsIfTheyDontExist(newDmp, apiContext.getOperationsContext().getDatabaseRepository().getOrganisationDao()); createOrganisationsIfTheyDontExist(newDmp, apiContext.getOperationsContext().getDatabaseRepository().getOrganisationDao());
@ -249,7 +251,7 @@ public class DataManagementPlanManager {
copyDatasets(newDmp, apiContext.getOperationsContext().getDatabaseRepository().getDatasetDao()); copyDatasets(newDmp, apiContext.getOperationsContext().getDatabaseRepository().getDatasetDao());
} }
public static void clone(ApiContext apiContext, UUID uuid, DataManagementPlanNewVersionModel dataManagementPlan, Principal principal) throws Exception { public void clone(ApiContext apiContext, UUID uuid, DataManagementPlanNewVersionModel dataManagementPlan, Principal principal) throws Exception {
DMP newDmp = dataManagementPlan.toDataModel(); DMP newDmp = dataManagementPlan.toDataModel();
createOrganisationsIfTheyDontExist(newDmp, apiContext.getOperationsContext().getDatabaseRepository().getOrganisationDao()); createOrganisationsIfTheyDontExist(newDmp, apiContext.getOperationsContext().getDatabaseRepository().getOrganisationDao());
createResearchersIfTheyDontExist(newDmp, apiContext.getOperationsContext().getDatabaseRepository().getResearcherDao()); createResearchersIfTheyDontExist(newDmp, apiContext.getOperationsContext().getDatabaseRepository().getResearcherDao());
@ -263,7 +265,7 @@ public class DataManagementPlanManager {
copyDatasets(newDmp, apiContext.getOperationsContext().getDatabaseRepository().getDatasetDao()); copyDatasets(newDmp, apiContext.getOperationsContext().getDatabaseRepository().getDatasetDao());
} }
public static void delete(ApiContext apiContext, UUID uuid) throws DMPWithDatasetsDeleteException { public void delete(ApiContext apiContext, UUID uuid) throws DMPWithDatasetsDeleteException {
DMP oldDmp = apiContext.getOperationsContext().getDatabaseRepository().getDmpDao().find(uuid); DMP oldDmp = apiContext.getOperationsContext().getDatabaseRepository().getDmpDao().find(uuid);
if (oldDmp.getDataset().size() > 0) if (oldDmp.getDataset().size() > 0)
throw new DMPWithDatasetsDeleteException("You cannot Remove Datamanagement Plan with Datasets"); throw new DMPWithDatasetsDeleteException("You cannot Remove Datamanagement Plan with Datasets");
@ -271,7 +273,7 @@ public class DataManagementPlanManager {
apiContext.getOperationsContext().getDatabaseRepository().getDmpDao().createOrUpdate(oldDmp); apiContext.getOperationsContext().getDatabaseRepository().getDmpDao().createOrUpdate(oldDmp);
} }
private static void createResearchersIfTheyDontExist(DMP newDmp, ResearcherDao researcherRepository) { private void createResearchersIfTheyDontExist(DMP newDmp, ResearcherDao researcherRepository) {
if (newDmp.getResearchers() != null && !newDmp.getResearchers().isEmpty()) { if (newDmp.getResearchers() != null && !newDmp.getResearchers().isEmpty()) {
for (eu.eudat.data.entities.Researcher researcher : newDmp.getResearchers()) { for (eu.eudat.data.entities.Researcher researcher : newDmp.getResearchers()) {
ResearcherCriteria criteria = new ResearcherCriteria(); ResearcherCriteria criteria = new ResearcherCriteria();
@ -283,7 +285,7 @@ public class DataManagementPlanManager {
} }
} }
private static void createOrganisationsIfTheyDontExist(DMP newDmp, OrganisationDao organisationRepository) { private void createOrganisationsIfTheyDontExist(DMP newDmp, OrganisationDao organisationRepository) {
if (newDmp.getOrganisations() != null && !newDmp.getOrganisations().isEmpty()) { if (newDmp.getOrganisations() != null && !newDmp.getOrganisations().isEmpty()) {
for (eu.eudat.data.entities.Organisation organisation : newDmp.getOrganisations()) { for (eu.eudat.data.entities.Organisation organisation : newDmp.getOrganisations()) {
OrganisationCriteria criteria = new OrganisationCriteria(); OrganisationCriteria criteria = new OrganisationCriteria();
@ -295,7 +297,7 @@ public class DataManagementPlanManager {
} }
} }
private static void createProjectIfItDoesntExist(DMP newDmp, ProjectDao projectDao, UserInfo userInfo) { private void createProjectIfItDoesntExist(DMP newDmp, ProjectDao projectDao, UserInfo userInfo) {
if (newDmp.getProject() != null) { if (newDmp.getProject() != null) {
Project project = newDmp.getProject(); Project project = newDmp.getProject();
ProjectCriteria criteria = new ProjectCriteria(); ProjectCriteria criteria = new ProjectCriteria();
@ -310,7 +312,7 @@ public class DataManagementPlanManager {
} }
private static void copyDatasets(DMP newDmp, DatasetDao datasetDao) { private void copyDatasets(DMP newDmp, DatasetDao datasetDao) {
List<CompletableFuture<Dataset>> futures = new LinkedList<>(); List<CompletableFuture<Dataset>> futures = new LinkedList<>();
for (Dataset dataset : newDmp.getDataset()) { for (Dataset dataset : newDmp.getDataset()) {
datasetDao.asQueryable().withHint(HintedModelFactory.getHint(DatasetListingModel.class)).where((builder, root) -> builder.equal(root.get("id"), dataset.getId())).getSingleAsync() datasetDao.asQueryable().withHint(HintedModelFactory.getHint(DatasetListingModel.class)).where((builder, root) -> builder.equal(root.get("id"), dataset.getId())).getSingleAsync()

12
dmp-frontend/src/app/core/services/dmp/dmp.service.ts
View File

@ -24,18 +24,18 @@ export class DmpService {
} }
getPaged(dataTableRequest: DataTableRequest<DmpCriteria>): Observable<DataTableData<DmpListingModel>> { getPaged(dataTableRequest: DataTableRequest<DmpCriteria>): Observable<DataTableData<DmpListingModel>> {
return this.http.post<DataTableData<DmpListingModel>>(this.actionUrl + 'getPaged', dataTableRequest, { headers: this.headers }); return this.http.post<DataTableData<DmpListingModel>>(this.actionUrl + 'paged', dataTableRequest, { headers: this.headers });
} }
getSingle(id: String): Observable<DmpModel> { getSingle(id: String): Observable<DmpModel> {
return this.http.get<DmpModel>(this.actionUrl + 'getSingle/' + id, { headers: this.headers }); return this.http.get<DmpModel>(this.actionUrl + id, { headers: this.headers }); //'getSingle/' +
} }
unlock(id: String): Observable<DmpModel> { unlock(id: String): Observable<DmpModel> {
return this.http.get<DmpModel>(this.actionUrl + id + '/unlock', { headers: this.headers }); return this.http.get<DmpModel>(this.actionUrl + id + '/unlock', { headers: this.headers });
} }
createDmp(dataManagementPlanModel: DmpModel): Observable<DmpModel> { createDmp(dataManagementPlanModel: DmpModel): Observable<DmpModel> {
return this.http.post<DmpModel>(this.actionUrl + 'createOrUpdate', dataManagementPlanModel, { headers: this.headers }); return this.http.post<DmpModel>(this.actionUrl + 'post', dataManagementPlanModel, { headers: this.headers });
} }
inactivate(id: String): Observable<DmpModel> { inactivate(id: String): Observable<DmpModel> {
@ -55,17 +55,13 @@ export class DmpService {
} }
delete(id: String): Observable<DmpModel> { delete(id: String): Observable<DmpModel> {
return this.http.delete<DmpModel>(this.actionUrl + 'delete/' + id, { headers: this.headers }); return this.http.delete<DmpModel>(this.actionUrl + id, { headers: this.headers }); // + 'delete/'
} }
getDynamicField(requestItem: RequestItem<DynamicFieldProjectCriteria>): any { getDynamicField(requestItem: RequestItem<DynamicFieldProjectCriteria>): any {
return this.http.post<any>(this.actionUrl + 'dynamic', requestItem, { headers: this.headers }); return this.http.post<any>(this.actionUrl + 'dynamic', requestItem, { headers: this.headers });
} }
get(requestItem: RequestItem<DmpCriteria>): Observable<DmpListingModel[]> {
return this.http.post<DmpListingModel[]>(this.actionUrl + 'get', requestItem, { headers: this.headers });
}
public downloadXML(id: string): Observable<HttpResponse<Blob>> { public downloadXML(id: string): Observable<HttpResponse<Blob>> {
return this.httpClient.get(this.actionUrl + 'getXml/' + id, { responseType: 'blob', observe: 'response' }); return this.httpClient.get(this.actionUrl + 'getXml/' + id, { responseType: 'blob', observe: 'response' });
} }

54
dmp-frontend/src/app/ui/dataset/dataset-wizard/dataset-wizard.component.ts
View File

@ -25,6 +25,8 @@ import { IBreadCrumbComponent } from '../../misc/breadcrumb/definition/IBreadCru
import { DatasetDescriptionFormEditorModel } from '../../misc/dataset-description-form/dataset-description-form.model'; import { DatasetDescriptionFormEditorModel } from '../../misc/dataset-description-form/dataset-description-form.model';
import { DatasetWizardEditorModel } from './dataset-wizard-editor.model'; import { DatasetWizardEditorModel } from './dataset-wizard-editor.model';
import { SnackBarNotificationLevel, UiNotificationService } from '../../../core/services/notification/ui-notification-service'; import { SnackBarNotificationLevel, UiNotificationService } from '../../../core/services/notification/ui-notification-service';
import { ConfirmationDialogComponent } from '../../../library/confirmation-dialog/confirmation-dialog.component';
import { DataTableRequest } from '../../../core/model/data-table/data-table-request';
@Component({ @Component({
selector: 'app-dataset-wizard-component', selector: 'app-dataset-wizard-component',
@ -206,15 +208,17 @@ export class DatasetWizardComponent extends BaseComponent implements OnInit, IBr
.pipe(takeUntil(this._destroyed)) .pipe(takeUntil(this._destroyed))
.subscribe((params: Params) => { .subscribe((params: Params) => {
const itemId = params['id']; const itemId = params['id'];
if (itemId != null) { setTimeout(()=> this.stepper.selectedIndex = 2); } if (itemId != null) { setTimeout(() => this.stepper.selectedIndex = 2); }
}); });
} }
searchDmp(query: string): Observable<DmpListingModel[]> { searchDmp(query: string): Observable<DmpListingModel[]> {
const dmpRequestItem: RequestItem<DmpCriteria> = new RequestItem(); const fields: Array<string> = new Array<string>();
dmpRequestItem.criteria = new DmpCriteria(); fields.push('asc');
dmpRequestItem.criteria.like = query; const dmpDataTableRequest: DataTableRequest<DmpCriteria> = new DataTableRequest(0, null, { fields: fields });
return this.dmpService.get(dmpRequestItem); dmpDataTableRequest.criteria = new DmpCriteria();
dmpDataTableRequest.criteria.like = query;
return this.dmpService.getPaged(dmpDataTableRequest).map(x => x.data);
} }
loadDatasetProfiles() { loadDatasetProfiles() {
@ -235,7 +239,7 @@ export class DatasetWizardComponent extends BaseComponent implements OnInit, IBr
} }
getDefinition() { getDefinition() {
if (this.formGroup.invalid) { setTimeout(()=> this.stepper.selectedIndex = 0); return; } if (this.formGroup.invalid) { setTimeout(() => this.stepper.selectedIndex = 0); return; }
if (this.isNew) { if (this.isNew) {
this.datasetWizardService.getDefinition(this.formGroup.get('profile').value) this.datasetWizardService.getDefinition(this.formGroup.get('profile').value)
.pipe(takeUntil(this._destroyed)) .pipe(takeUntil(this._destroyed))
@ -387,25 +391,23 @@ export class DatasetWizardComponent extends BaseComponent implements OnInit, IBr
} }
openConfirm(dmpLabel, id): void { openConfirm(dmpLabel, id): void {
// this._dialogService.openConfirm({ const dialogRef = this.dialog.open(ConfirmationDialogComponent, {
// message: 'Are you sure you want to delete the "' + dmpLabel + '"', maxWidth: '300px',
// disableClose: true || false, data: {
// viewContainerRef: this._viewContainerRef, message: this.language.instant('GENERAL.CONFIRMATION-DIALOG.DELETE-ITEM'),
// title: 'Confirm', confirmButton: this.language.instant('GENERAL.CONFIRMATION-DIALOG.ACTIONS.CONFIRM'),
// cancelButton: 'No', cancelButton: this.language.instant('GENERAL.CONFIRMATION-DIALOG.ACTIONS.CANCEL')
// acceptButton: 'Yes' }
// }).afterClosed() });
// .pipe(takeUntil(this._destroyed)) dialogRef.afterClosed().pipe(takeUntil(this._destroyed)).subscribe(result => {
// .subscribe((accept: boolean) => { if (result) {
// if (accept) { this.datasetWizardService.delete(id)
// this.datasetWizardService.delete(id) .pipe(takeUntil(this._destroyed))
// .pipe(takeUntil(this._destroyed)) .subscribe(
// .subscribe(() => { complete => { this.onCallbackSuccess() },
// this.router.navigate(['/datasets']); error => this.onCallbackError(error)
// }); );
// } else { }
// // DO SOMETHING ELSE });
// }
// });
} }
} }