[WIP] refactor dmp export following the blueprint schema

This commit is contained in:
Bernaldo Mihasi 2023-09-11 08:42:30 +03:00
parent cd80e78e40
commit 6073c4cd85
1 changed files with 258 additions and 103 deletions

View File

@ -50,8 +50,8 @@ import eu.eudat.models.data.dmp.*;
import eu.eudat.models.data.doi.DepositRequest;
import eu.eudat.models.data.doi.Doi;
import eu.eudat.models.data.dynamicfields.DynamicFieldWithValue;
import eu.eudat.models.data.entities.xmlmodels.dmpprofiledefinition.DataManagementPlanProfile;
import eu.eudat.models.data.entities.xmlmodels.dmpprofiledefinition.Field;
import eu.eudat.models.data.entities.xmlmodels.dmpprofiledefinition.*;
import eu.eudat.models.data.entities.xmlmodels.dmpprofiledefinition.types.FieldCategory;
import eu.eudat.models.data.funder.FunderDMPEditorModel;
import eu.eudat.models.data.grant.GrantDMPEditorModel;
import eu.eudat.models.data.helpermodels.Tuple;
@ -1251,116 +1251,271 @@ public class DataManagementPlanManager {
// wordBuilder.addParagraphContent("Datasets", document, ParagraphStyle.HEADER1, BigInteger.ZERO);
// // Space below Datasets.
// XWPFParagraph parBreakDatasets = document.createParagraph();
final Boolean isFinalized = dmpEntity.getStatus() == DMP.DMPStatus.FINALISED.getValue();
final Boolean isPublic = dmpEntity.isPublic();
dmpEntity.getDataset().stream()
.filter(item -> item.getStatus() != Dataset.Status.CANCELED.getValue())
.filter(item -> item.getStatus() != Dataset.Status.DELETED.getValue())
.filter(item -> !isPublic && !isFinalized || item.getStatus() == Dataset.Status.FINALISED.getValue())
.sorted(Comparator.comparing(Dataset::getCreated))
.forEach(datasetEntity -> {
Map<String, Object> properties = new HashMap<>();
if (datasetEntity.getProperties() != null) {
//ObjectMapper objectMapper = new ObjectMapper();
try {
properties = objectMapper.readValue(datasetEntity.getProperties(), LinkedHashMap.class);
} catch (IOException e) {
logger.error(e.getLocalizedMessage(), e);
}
/*JSONObject jObject = new JSONObject(datasetEntity.getProperties());
properties = jObject.toMap();*/
}
// Custom style for the Dataset title.
//wordBuilder.addParagraphContent("Title: " + datasetEntity.getLabel(), document, ParagraphStyle.HEADER1, BigInteger.ZERO);
XWPFParagraph datasetLabelParagraph = document.createParagraph();
// datasetLabelParagraph.setStyle("Heading2");
datasetLabelParagraph.setSpacingBetween(1.0);
XWPFRun runDatasetTitle1 = datasetLabelParagraph.createRun();
runDatasetTitle1.setText("Title: ");
runDatasetTitle1.setColor("000000");
//runDatasetTitle1.setBold(true);
//runDatasetTitle1.setFontSize(12);
XWPFRun runDatasetTitle = datasetLabelParagraph.createRun();
runDatasetTitle.setText(datasetEntity.getLabel());
runDatasetTitle.setColor("116a78");
//runDatasetTitle.setBold(true);
//runDatasetTitle.setFontSize(12);
DMPProfile dmpProfile = dmpEntity.getProfile();
DataManagementPlanBlueprintListingModel dmpBlueprintModel = new DataManagementPlanBlueprintListingModel();
dmpBlueprintModel.fromDataModel(dmpProfile);
DataManagementPlanBlueprint dmpBlueprint = dmpBlueprintModel.getDefinition();
for(Section section: dmpBlueprint.getSections()){
wordBuilder.addParagraphContent("Section " + section.getOrdinal(), document, ParagraphStyle.HEADER1, BigInteger.ZERO, 0);
XWPFParagraph sectionInfoParagraph = document.createParagraph();
sectionInfoParagraph.setSpacingBetween(1.0);
XWPFRun runSectionTitle = sectionInfoParagraph.createRun();
runSectionTitle.setText("Title: ");
runSectionTitle.setColor("000000");
XWPFRun runSectionTitleText = sectionInfoParagraph.createRun();
runSectionTitleText.setText(section.getLabel());
runSectionTitleText.setColor("116a78");
XWPFParagraph sectionDescriptionParagraph = document.createParagraph();
XWPFRun runSectionDescription = sectionDescriptionParagraph.createRun();
runSectionDescription.setText("Description: ");
runSectionDescription.setColor("000000");
XWPFRun runSectionDescriptionText = sectionDescriptionParagraph.createRun();
runSectionDescriptionText.setText(section.getDescription());
runSectionDescriptionText.setColor("116a78");
XWPFParagraph datasetTemplateParagraph = document.createParagraph();
// datasetTemplateParagraph.setStyle("Heading3");
XWPFRun runDatasetTemplate1 = datasetTemplateParagraph.createRun();
runDatasetTemplate1.setText("Template: ");
runDatasetTemplate1.setColor("000000");
//runDatasetTemplate1.setBold(true);
//runDatasetTemplate1.setFontSize(12);
XWPFRun runDatasetTemplate = datasetTemplateParagraph.createRun();
runDatasetTemplate.setText(datasetEntity.getProfile().getLabel());
runDatasetTemplate.setColor("116a78");
//runDatasetTemplate.setBold(true);
//runDatasetTemplate.setFontSize(12);
wordBuilder.addParagraphContent("Section Fields", document, ParagraphStyle.HEADER2, BigInteger.ZERO, 0);
section.getFields().sort(Comparator.comparingInt(FieldModel::getOrdinal));
for(FieldModel field: section.getFields()){
if(field.getCategory() == FieldCategory.SYSTEM){
SystemField systemField = field.toSystemField();
XWPFParagraph systemFieldParagraph = document.createParagraph();
systemFieldParagraph.setSpacingBetween(1.0);
XWPFRun runSyStemFieldTitle = systemFieldParagraph.createRun();
runSyStemFieldTitle.setText("Title: ");
runSyStemFieldTitle.setColor("000000");
XWPFRun runSystemFieldTitleText = systemFieldParagraph.createRun();
runSystemFieldTitleText.setText(systemField.getLabel());
runSystemFieldTitleText.setColor("116a78");
if(systemField.getDescription() != null && !systemField.getDescription().isEmpty()){
XWPFParagraph systemFieldDescription = document.createParagraph();
systemFieldDescription.setSpacingBetween(1.0);
XWPFRun runSyStemFieldDescription = systemFieldDescription.createRun();
runSyStemFieldDescription.setText("Description: ");
runSyStemFieldDescription.setColor("000000");
XWPFRun runSystemFieldDescriptionText = systemFieldDescription.createRun();
runSystemFieldDescriptionText.setText(systemField.getDescription());
runSystemFieldDescriptionText.setColor("116a78");
}
XWPFParagraph systemFieldInput = document.createParagraph();
systemFieldInput.setSpacingBetween(1.0);
XWPFRun runInput = systemFieldInput.createRun();
runInput.setText("Input: ");
runInput.setColor("000000");
switch (systemField.getType()) {
case TEXT:
XWPFRun runTitle = systemFieldInput.createRun();
runTitle.setText(dmpEntity.getLabel());
runTitle.setColor("116a78");
break;
case HTML_TEXT:
XWPFRun runDescription = systemFieldInput.createRun();
runDescription.setText(dmpEntity.getDescription());
runDescription.setColor("116a78");
break;
case RESEARCHERS:
for(Researcher researcher: dmpEntity.getResearchers()){
XWPFRun runResearcher = systemFieldInput.createRun();
runResearcher.setText("" + researcher.getLabel());
runResearcher.setColor("116a78");
}
break;
case ORGANIZATIONS:
for(Organisation organisation: dmpEntity.getOrganisations()){
XWPFRun runOrganisation = systemFieldInput.createRun();
runOrganisation.setText("" + organisation.getLabel());
runOrganisation.setColor("116a78");
}
break;
case LANGUAGE:
XWPFRun runLanguage = systemFieldInput.createRun();
runLanguage.setText(objectMapper.readValue(dmpEntity.getExtraProperties(), HashMap.class).get("language").toString());
runLanguage.setColor("116a78");
break;
case CONTACT:
XWPFRun runContact = systemFieldInput.createRun();
runContact.setText(dmpEntity.getCreator().getName());
runContact.setColor("116a78");
break;
case FUNDER:
XWPFRun runFunder = systemFieldInput.createRun();
runFunder.setText(dmpEntity.getGrant().getFunder().getLabel());
runFunder.setColor("116a78");
break;
case GRANT:
XWPFRun runGrant = systemFieldInput.createRun();
runGrant.setText(dmpEntity.getGrant().getLabel());
runGrant.setColor("116a78");
break;
case PROJECT:
XWPFRun runProject = systemFieldInput.createRun();
runProject.setText(dmpEntity.getProject().getLabel());
runProject.setColor("116a78");
break;
case LICENSE:
XWPFRun runLicense = systemFieldInput.createRun();
runLicense.setText(objectMapper.readValue(dmpEntity.getExtraProperties(), HashMap.class).get("license").toString());
runLicense.setColor("116a78");
break;
case ACCESS_RIGHTS:
XWPFRun runAccessRights = systemFieldInput.createRun();
runAccessRights.setText(objectMapper.readValue(dmpEntity.getExtraProperties(), HashMap.class).get("visible").toString());
runAccessRights.setColor("116a78");
break;
}
document.createParagraph();
}
else if(field.getCategory() == FieldCategory.EXTRA){
ExtraField extraField = field.toExtraField();
XWPFParagraph extraFieldParagraph = document.createParagraph();
extraFieldParagraph.setSpacingBetween(1.0);
XWPFRun runExtraFieldLabel = extraFieldParagraph.createRun();
runExtraFieldLabel.setText(extraField.getLabel());
runExtraFieldLabel.setColor("116a78");
if(extraField.getDescription() != null && !extraField.getDescription().isEmpty()){
XWPFRun runExtraFieldDescription = extraFieldParagraph.createRun();
runExtraFieldDescription.setText(extraField.getDescription());
runExtraFieldDescription.setColor("116a78");
}
XWPFRun runExtraFieldInput = extraFieldParagraph.createRun();
runExtraFieldInput.setText(extraField.getLabel());
runExtraFieldInput.setColor("116a78");
}
}
document.createParagraph();
if(!section.getDescriptionTemplates().isEmpty()){
wordBuilder.addParagraphContent("Section descriptions", document, ParagraphStyle.HEADER2, BigInteger.ZERO, 0);
wordBuilder.addParagraphContent("Description Templates", document, ParagraphStyle.HEADER4, BigInteger.ZERO, 0);
for(eu.eudat.models.data.entities.xmlmodels.dmpprofiledefinition.DescriptionTemplate descriptionTemplate: section.getDescriptionTemplates()){
XWPFParagraph templateParagraph = document.createParagraph();
XWPFRun runTemplateLabel = templateParagraph.createRun();
runTemplateLabel.setText("" + descriptionTemplate.getLabel());
runTemplateLabel.setColor("116a78");
}
// /*XWPFParagraph externalReferencesParagraph = document.createParagraph();
// externalReferencesParagraph.setStyle("Heading3");
// XWPFRun externalReferencesRun = externalReferencesParagraph.createRun();
// externalReferencesRun.setText("External References");
// externalReferencesRun.setColor("2E75B6");
// externalReferencesRun.setBold(true);
// externalReferencesRun.setFontSize(12);
final Boolean isFinalized = dmpEntity.getStatus() == DMP.DMPStatus.FINALISED.getValue();
final Boolean isPublic = dmpEntity.isPublic();
dmpEntity.getDataset().stream()
.filter(item -> item.getStatus() != Dataset.Status.CANCELED.getValue())
.filter(item -> item.getStatus() != Dataset.Status.DELETED.getValue())
.filter(item -> !isPublic && !isFinalized || item.getStatus() == Dataset.Status.FINALISED.getValue())
.filter(item -> item.getDmpSectionIndex().equals(section.getOrdinal() - 1))
.sorted(Comparator.comparing(Dataset::getCreated))
.forEach(datasetEntity -> {
Map<String, Object> properties = new HashMap<>();
if (datasetEntity.getProperties() != null) {
//ObjectMapper objectMapper = new ObjectMapper();
try {
properties = objectMapper.readValue(datasetEntity.getProperties(), LinkedHashMap.class);
} catch (IOException e) {
logger.error(e.getLocalizedMessage(), e);
}
/*JSONObject jObject = new JSONObject(datasetEntity.getProperties());
properties = jObject.toMap();*/
}
// Dataset Description custom style.
XWPFParagraph datasetDescriptionParagraph = document.createParagraph();
datasetDescriptionParagraph.setStyle("Heading4");
datasetDescriptionParagraph.setSpacingBetween(1.5);
XWPFRun datasetDescriptionRun = datasetDescriptionParagraph.createRun();
datasetDescriptionRun.setText("Dataset Description");
//datasetDescriptionRun.setColor("2E75B6");
//datasetDescriptionRun.setBold(true);
datasetDescriptionRun.setFontSize(15);
// Custom style for the Dataset title.
//wordBuilder.addParagraphContent("Title: " + datasetEntity.getLabel(), document, ParagraphStyle.HEADER1, BigInteger.ZERO);
XWPFParagraph datasetLabelParagraph = document.createParagraph();
// datasetLabelParagraph.setStyle("Heading2");
datasetLabelParagraph.setSpacingBetween(1.0);
XWPFRun runDatasetTitle1 = datasetLabelParagraph.createRun();
runDatasetTitle1.setText("Title: ");
runDatasetTitle1.setColor("000000");
//runDatasetTitle1.setBold(true);
//runDatasetTitle1.setFontSize(12);
XWPFRun runDatasetTitle = datasetLabelParagraph.createRun();
runDatasetTitle.setText(datasetEntity.getLabel());
runDatasetTitle.setColor("116a78");
//runDatasetTitle.setBold(true);
//runDatasetTitle.setFontSize(12);
XWPFParagraph datasetTemplateParagraph = document.createParagraph();
// datasetTemplateParagraph.setStyle("Heading3");
XWPFRun runDatasetTemplate1 = datasetTemplateParagraph.createRun();
runDatasetTemplate1.setText("Template: ");
runDatasetTemplate1.setColor("000000");
//runDatasetTemplate1.setBold(true);
//runDatasetTemplate1.setFontSize(12);
XWPFRun runDatasetTemplate = datasetTemplateParagraph.createRun();
runDatasetTemplate.setText(datasetEntity.getProfile().getLabel());
runDatasetTemplate.setColor("116a78");
//runDatasetTemplate.setBold(true);
//runDatasetTemplate.setFontSize(12);
// /*XWPFParagraph externalReferencesParagraph = document.createParagraph();
// externalReferencesParagraph.setStyle("Heading3");
// XWPFRun externalReferencesRun = externalReferencesParagraph.createRun();
// externalReferencesRun.setText("External References");
// externalReferencesRun.setColor("2E75B6");
// externalReferencesRun.setBold(true);
// externalReferencesRun.setFontSize(12);
//
// wordBuilder.addParagraphContent("Data Repositories", document, ParagraphStyle.HEADER4, BigInteger.ZERO);
// if (datasetEntity.getDatasetDataRepositories().size() > 0) {
// wordBuilder.addParagraphContent(datasetEntity.getDatasetDataRepositories().stream().map(DatasetDataRepository::getDataRepository).map(DataRepository::getLabel).collect(Collectors.joining(", "))
// , document, ParagraphStyle.TEXT, BigInteger.ZERO);
// }
// wordBuilder.addParagraphContent("External Datasets", document, ParagraphStyle.HEADER4, BigInteger.ZERO);
// if (datasetEntity.getDatasetExternalDatasets().size() > 0) {
// wordBuilder.addParagraphContent(datasetEntity.getDatasetExternalDatasets().stream().map(DatasetExternalDataset::getExternalDataset).map(ExternalDataset::getLabel).collect(Collectors.joining(", "))
// , document, ParagraphStyle.TEXT, BigInteger.ZERO);
// }
// wordBuilder.addParagraphContent("Registries", document, ParagraphStyle.HEADER4, BigInteger.ZERO);
// if (datasetEntity.getRegistries().size() > 0) {
// wordBuilder.addParagraphContent(datasetEntity.getRegistries().stream().map(Registry::getLabel).collect(Collectors.joining(", "))
// , document, ParagraphStyle.TEXT, BigInteger.ZERO);
// }
// wordBuilder.addParagraphContent("Services", document, ParagraphStyle.HEADER4, BigInteger.ZERO);
// if (datasetEntity.getServices().size() > 0) {
// wordBuilder.addParagraphContent(datasetEntity.getServices().stream().map(DatasetService::getService).map(Service::getLabel).collect(Collectors.joining(", "))
// , document, ParagraphStyle.TEXT, BigInteger.ZERO);
// }
// *//*wordBuilder.addParagraphContent("Tags", document, ParagraphStyle.HEADER3, BigInteger.ZERO);
// if (datasetEntity.().size() > 0) {
// wordBuilder.addParagraphContent(datasetEntity.getServices().stream().map(DatasetService::getService).map(Service::getLabel).collect(Collectors.joining(", "))
// , document, ParagraphStyle.HEADER4, BigInteger.ZERO);
// }*/
// wordBuilder.addParagraphContent("Data Repositories", document, ParagraphStyle.HEADER4, BigInteger.ZERO);
// if (datasetEntity.getDatasetDataRepositories().size() > 0) {
// wordBuilder.addParagraphContent(datasetEntity.getDatasetDataRepositories().stream().map(DatasetDataRepository::getDataRepository).map(DataRepository::getLabel).collect(Collectors.joining(", "))
// , document, ParagraphStyle.TEXT, BigInteger.ZERO);
// }
// wordBuilder.addParagraphContent("External Datasets", document, ParagraphStyle.HEADER4, BigInteger.ZERO);
// if (datasetEntity.getDatasetExternalDatasets().size() > 0) {
// wordBuilder.addParagraphContent(datasetEntity.getDatasetExternalDatasets().stream().map(DatasetExternalDataset::getExternalDataset).map(ExternalDataset::getLabel).collect(Collectors.joining(", "))
// , document, ParagraphStyle.TEXT, BigInteger.ZERO);
// }
// wordBuilder.addParagraphContent("Registries", document, ParagraphStyle.HEADER4, BigInteger.ZERO);
// if (datasetEntity.getRegistries().size() > 0) {
// wordBuilder.addParagraphContent(datasetEntity.getRegistries().stream().map(Registry::getLabel).collect(Collectors.joining(", "))
// , document, ParagraphStyle.TEXT, BigInteger.ZERO);
// }
// wordBuilder.addParagraphContent("Services", document, ParagraphStyle.HEADER4, BigInteger.ZERO);
// if (datasetEntity.getServices().size() > 0) {
// wordBuilder.addParagraphContent(datasetEntity.getServices().stream().map(DatasetService::getService).map(Service::getLabel).collect(Collectors.joining(", "))
// , document, ParagraphStyle.TEXT, BigInteger.ZERO);
// }
// *//*wordBuilder.addParagraphContent("Tags", document, ParagraphStyle.HEADER3, BigInteger.ZERO);
// if (datasetEntity.().size() > 0) {
// wordBuilder.addParagraphContent(datasetEntity.getServices().stream().map(DatasetService::getService).map(Service::getLabel).collect(Collectors.joining(", "))
// , document, ParagraphStyle.HEADER4, BigInteger.ZERO);
// }*/
//
//
wordBuilder.addParagraphContent(datasetEntity.getDescription(), document, ParagraphStyle.HTML, BigInteger.ZERO, 0);
// Dataset Description custom style.
XWPFParagraph datasetDescriptionParagraph = document.createParagraph();
datasetDescriptionParagraph.setStyle("Heading4");
datasetDescriptionParagraph.setSpacingBetween(1.5);
XWPFRun datasetDescriptionRun = datasetDescriptionParagraph.createRun();
datasetDescriptionRun.setText("Dataset Description");
//datasetDescriptionRun.setColor("2E75B6");
//datasetDescriptionRun.setBold(true);
datasetDescriptionRun.setFontSize(15);
XWPFParagraph datasetDescParagraph = document.createParagraph();
XWPFRun runDatasetDescription1 = datasetDescParagraph.createRun();
runDatasetDescription1.setText("Description: ");
runDatasetDescription1.setColor("000000");
XWPFRun runDatasetDescription = datasetDescParagraph.createRun();
runDatasetDescription.setText(datasetEntity.getProfile().getLabel());
runDatasetDescription.setColor("116a78");
//wordBuilder.addParagraphContent(datasetEntity.getDescription(), document, ParagraphStyle.HTML, BigInteger.ZERO, 0);
PagedDatasetProfile pagedDatasetProfile = datasetManager.getPagedProfile(dataset, datasetEntity);
visibilityRuleService.setProperties(properties);
visibilityRuleService.buildVisibilityContext(pagedDatasetProfile.getRules());
try {
wordBuilder.build(document, pagedDatasetProfile, visibilityRuleService);
} catch (IOException e) {
logger.error(e.getMessage(), e);
}
// Page break at the end of the Dataset.
XWPFParagraph parBreakDataset = document.createParagraph();
parBreakDataset.setPageBreak(true);
});
document.createParagraph();
PagedDatasetProfile pagedDatasetProfile = datasetManager.getPagedProfile(dataset, datasetEntity);
visibilityRuleService.setProperties(properties);
visibilityRuleService.buildVisibilityContext(pagedDatasetProfile.getRules());
try {
wordBuilder.build(document, pagedDatasetProfile, visibilityRuleService);
} catch (IOException e) {
logger.error(e.getMessage(), e);
}
// Page break at the end of the Dataset.
XWPFParagraph parBreakDataset = document.createParagraph();
parBreakDataset.setPageBreak(true);
});
}
}
// // Removes the top empty headings.
// for (int i = 0; i < 6; i++) {