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This commit is contained in:
Ioannis Kalyvas 2018-02-07 11:56:30 +02:00
parent e437ae354e
commit 5692b2072f
61 changed files with 1453 additions and 27096 deletions
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2
dmp-backend/src/main/java/eu/eudat/EuDatApplication.java
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@ -7,11 +7,11 @@ import org.springframework.boot.SpringApplication;
import org.springframework.boot.autoconfigure.SpringBootApplication;
import org.springframework.boot.builder.SpringApplicationBuilder;
import org.springframework.boot.web.support.SpringBootServletInitializer;
import org.springframework.scheduling.annotation.EnableAsync;
import org.springframework.web.method.support.HandlerMethodArgumentResolver;
import java.util.List;
@SpringBootApplication
public class EuDatApplication extends SpringBootServletInitializer {
private static final Logger logger = LoggerFactory.getLogger(EuDatApplication.class);

3
dmp-backend/src/main/java/eu/eudat/configurations/WebMVCConfiguration.java
View File

@ -8,13 +8,14 @@ import org.springframework.boot.web.servlet.ErrorPage;
import org.springframework.context.annotation.Bean;
import org.springframework.context.annotation.Configuration;
import org.springframework.http.HttpStatus;
import org.springframework.scheduling.annotation.EnableAsync;
import org.springframework.web.method.support.HandlerMethodArgumentResolver;
import org.springframework.web.servlet.config.annotation.ViewControllerRegistry;
import org.springframework.web.servlet.config.annotation.WebMvcConfigurerAdapter;
import java.util.List;
@EnableAsync
@Configuration
public class WebMVCConfiguration extends WebMvcConfigurerAdapter {

14
dmp-backend/src/main/java/eu/eudat/controllers/Admin.java
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@ -5,9 +5,11 @@ import java.util.UUID;
import eu.eudat.dao.entities.*;
import eu.eudat.managers.DashBoardManager;
import eu.eudat.models.dashboard.DashBoardStatistics;
import eu.eudat.models.helpers.responses.ResponseItem;
import eu.eudat.models.security.Principal;
import eu.eudat.security.claims.ClaimedAuthorities;
import eu.eudat.services.ApiContext;
import eu.eudat.types.ApiMessageCode;
import eu.eudat.types.Authorities;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.context.ApplicationContext;
@ -52,7 +54,7 @@ public class Admin extends BaseController {
@Transactional
@RequestMapping(method = RequestMethod.POST, value = {"/admin/addDmp/{id}"}, consumes = "application/json", produces = "application/json")
public ResponseEntity<Object> updateDmp(@PathVariable String id, @RequestBody DatasetProfile profile, @ClaimedAuthorities(claims = {ADMIN}) Principal principal) {
public ResponseEntity<ResponseItem<UUID>> updateDmp(@PathVariable String id, @RequestBody DatasetProfile profile, @ClaimedAuthorities(claims = {ADMIN}) Principal principal) {
try {
eu.eudat.entities.DatasetProfile modelDefinition = AdminManager.generateViewStyleDefinition(profile);
@ -60,23 +62,23 @@ public class Admin extends BaseController {
datasetprofile.setDefinition(modelDefinition.getDefinition());
this.getApiContext().getDatabaseRepository().getDatasetProfileDao().createOrUpdate(datasetprofile);
return ResponseEntity.status(HttpStatus.OK).body(null);
return ResponseEntity.status(HttpStatus.OK).body(new ResponseItem<UUID>().status(ApiMessageCode.NO_MESSAGE));
} catch (Exception ex) {
ex.printStackTrace();
return ResponseEntity.status(HttpStatus.BAD_REQUEST).body("{\"reason\":\"" + ex.getMessage() + "\"}");
return ResponseEntity.status(HttpStatus.BAD_REQUEST).body(new ResponseItem<UUID>().status(ApiMessageCode.DEFAULT_ERROR_MESSAGE).message(ex.getMessage()));
}
}
@RequestMapping(method = RequestMethod.GET, value = {"/admin/get/{id}"}, produces = "application/json")
public ResponseEntity<Object> get(@PathVariable String id, @ClaimedAuthorities(claims = {ADMIN}) Principal principal) {
public ResponseEntity<ResponseItem<DatasetProfile>> get(@PathVariable String id, @ClaimedAuthorities(claims = {ADMIN}) Principal principal) {
try {
eu.eudat.entities.DatasetProfile profile = this.getApiContext().getDatabaseRepository().getDatasetProfileDao().find(UUID.fromString(id));
eu.eudat.models.admin.composite.DatasetProfile datasetprofile = AdminManager.generateDatasetProfileModel(profile);
datasetprofile.setLabel(profile.getLabel());
return ResponseEntity.status(HttpStatus.OK).body(datasetprofile);
return ResponseEntity.status(HttpStatus.OK).body(new ResponseItem<DatasetProfile>().status(ApiMessageCode.NO_MESSAGE).payload(datasetprofile));
} catch (Exception ex) {
ex.printStackTrace();
return ResponseEntity.status(HttpStatus.BAD_REQUEST).body("{\"reason\":\"" + ex.getMessage() + "\"}");
return ResponseEntity.status(HttpStatus.BAD_REQUEST).body(new ResponseItem<DatasetProfile>().status(ApiMessageCode.ERROR_MESSAGE));
}
}
}

25
dmp-backend/src/main/java/eu/eudat/controllers/DMPs.java
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@ -3,10 +3,10 @@ package eu.eudat.controllers;
import java.util.*;
import javax.transaction.Transactional;
import javax.validation.Valid;
import eu.eudat.entities.DMP;
import eu.eudat.exceptions.datamanagementplan.DMPWithDatasetsException;
import eu.eudat.models.dmp.DataManagementPlan;
import eu.eudat.models.dmp.DataManagementPlanCriteriaRequest;
import eu.eudat.models.dmp.DataManagementPlanTableRequest;
@ -19,6 +19,8 @@ import eu.eudat.types.ApiMessageCode;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.http.HttpStatus;
import org.springframework.http.ResponseEntity;
import org.springframework.scheduling.annotation.Async;
import org.springframework.transaction.annotation.Transactional;
import org.springframework.web.bind.annotation.*;
import eu.eudat.managers.DataManagementPlanManager;
@ -74,12 +76,11 @@ public class DMPs extends BaseController {
}
@Transactional
@RequestMapping(method = RequestMethod.POST, value = {"/dmps/clone/{id}"}, consumes = "application/json", produces = "application/json")
@RequestMapping(method = RequestMethod.POST, value = {"/dmps/new/{id}"}, consumes = "application/json", produces = "application/json")
public @ResponseBody
ResponseEntity<ResponseItem<DMP>> createOrUpdate(@PathVariable UUID id, @RequestBody eu.eudat.models.dmp.DataManagementPlan dataManagementPlan, Principal principal) {
ResponseEntity<ResponseItem<DMP>> newVersion(@PathVariable UUID id, @RequestBody eu.eudat.models.dmp.DataManagementPlanNewVersionModel dataManagementPlan, Principal principal) {
try {
DataManagementPlanManager.clone(this.getApiContext(), id, dataManagementPlan, principal);
DataManagementPlanManager.newVersion(this.getApiContext(), id, dataManagementPlan, principal);
return ResponseEntity.status(HttpStatus.OK).body(new ResponseItem<DMP>().status(ApiMessageCode.NO_MESSAGE));
} catch (Exception ex) {
ex.printStackTrace();
@ -101,5 +102,19 @@ public class DMPs extends BaseController {
}
}
@Transactional
@RequestMapping(method = RequestMethod.DELETE, value = {"/dmps/delete/{id}"}, consumes = "application/json", produces = "application/json")
public @ResponseBody
ResponseEntity<ResponseItem<DMP>> delete(@PathVariable UUID id, Principal principal) {
try {
DataManagementPlanManager.delete(this.getApiContext(), id);
return ResponseEntity.status(HttpStatus.OK).body(new ResponseItem<DMP>().status(ApiMessageCode.SUCCESS_MESSAGE).message("Successfully Deleted Dataset"));
} catch (DMPWithDatasetsException ex){
return ResponseEntity.status(HttpStatus.BAD_REQUEST).body(new ResponseItem<DMP>().status(ApiMessageCode.ERROR_MESSAGE).message(ex.getMessage()));
}catch (Exception ex) {
ex.printStackTrace();
return ResponseEntity.status(HttpStatus.BAD_REQUEST).body(new ResponseItem<DMP>().status(ApiMessageCode.DEFAULT_ERROR_MESSAGE).message(ex.getMessage()));
}
}
}

4
dmp-backend/src/main/java/eu/eudat/controllers/DatasetProfiles.java
View File

@ -31,7 +31,7 @@ public class DatasetProfiles extends BaseController {
super(apiContext);
}
@RequestMapping(method = RequestMethod.POST, value = {"/dmps/datasetprofiles/get"}, produces = "application/json")
@RequestMapping(method = RequestMethod.POST, value = {"/admin/datasetprofiles/get"}, produces = "application/json")
public @ResponseBody
ResponseEntity<ResponseItem<List<DatasetProfileAutocompleteItem>>> get(@RequestBody DatasetProfileAutocompleteRequest datasetProfileAutocompleteRequest) {
try {
@ -42,7 +42,7 @@ public class DatasetProfiles extends BaseController {
}
}
@RequestMapping(method = RequestMethod.POST, value = {"/dmps/datasetprofiles/getPaged"}, produces = "application/json")
@RequestMapping(method = RequestMethod.POST, value = {"/admin/datasetprofiles/getPaged"}, produces = "application/json")
public @ResponseBody
ResponseEntity<ResponseItem<DataTableData<DatasetProfileListingModel>>> getPaged(@RequestBody DatasetProfileTableRequestItem datasetProfileTableRequestItem) {
try {

2
dmp-backend/src/main/java/eu/eudat/controllers/Login.java
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@ -1,6 +1,6 @@
package eu.eudat.controllers;
import eu.eudat.exceptions.UnauthorisedException;
import eu.eudat.exceptions.security.UnauthorisedException;
import eu.eudat.managers.UserManager;
import eu.eudat.models.login.Credentials;
import eu.eudat.models.helpers.responses.ResponseItem;

28
dmp-backend/src/main/java/eu/eudat/controllers/Researchers.java
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@ -3,19 +3,19 @@ package eu.eudat.controllers;
import java.util.List;
import java.util.Map;
import eu.eudat.exceptions.security.UnauthorisedException;
import eu.eudat.managers.ResearcherManager;
import eu.eudat.models.dmp.Researcher;
import eu.eudat.models.external.ResearchersExternalSourcesModel;
import eu.eudat.models.helpers.responses.ResponseItem;
import eu.eudat.models.security.Principal;
import eu.eudat.services.ApiContext;
import eu.eudat.types.ApiMessageCode;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.http.HttpStatus;
import org.springframework.http.ResponseEntity;
import org.springframework.web.bind.annotation.CrossOrigin;
import org.springframework.web.bind.annotation.RequestMapping;
import org.springframework.web.bind.annotation.RequestMethod;
import org.springframework.web.bind.annotation.RequestParam;
import org.springframework.web.bind.annotation.ResponseBody;
import org.springframework.web.bind.annotation.RestController;
import org.springframework.transaction.annotation.Transactional;
import org.springframework.web.bind.annotation.*;
import eu.eudat.proxy.config.exceptions.HugeResultSet;
import eu.eudat.proxy.config.exceptions.NoURLFound;
@ -47,5 +47,21 @@ public class Researchers extends BaseController{
}
}
@Transactional
@RequestMapping(method = RequestMethod.POST, value = { "/researchers/create" }, consumes = "application/json",produces="application/json")
public @ResponseBody ResponseEntity<ResponseItem<Researcher>> create(@RequestBody eu.eudat.models.researcher.Researcher researcher, Principal principal) {
try {
ResearcherManager.create(this.getApiContext(),researcher);
return ResponseEntity.status(HttpStatus.OK).body(new ResponseItem<Researcher>().status(ApiMessageCode.SUCCESS_MESSAGE));
}catch (UnauthorisedException e){
e.printStackTrace();
throw e;
}
catch (Exception e) {
e.printStackTrace();
return ResponseEntity.status(HttpStatus.BAD_REQUEST).body(new ResponseItem<Researcher>().status(ApiMessageCode.SUCCESS_MESSAGE).message(e.getMessage()));
}
}
}

2
dmp-backend/src/main/java/eu/eudat/controllers/UserInvitationController.java
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@ -1,6 +1,6 @@
package eu.eudat.controllers;
import eu.eudat.exceptions.UnauthorisedException;
import eu.eudat.exceptions.security.UnauthorisedException;
import eu.eudat.managers.InvitationsManager;
import eu.eudat.models.helpers.responses.ResponseItem;
import eu.eudat.models.invitation.Invitation;

15
dmp-backend/src/main/java/eu/eudat/dao/databaselayer/context/DatabaseContext.java
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@ -5,9 +5,9 @@ import eu.eudat.queryable.QueryableList;
import eu.eudat.queryable.hibernatequeryablelist.QueryableHibernateList;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.stereotype.Repository;
import org.springframework.transaction.annotation.Transactional;
import javax.persistence.EntityManager;
import javax.persistence.TypedQuery;
import javax.persistence.*;
import javax.persistence.criteria.CriteriaBuilder;
import javax.persistence.criteria.CriteriaQuery;
import javax.persistence.criteria.Root;
@ -17,14 +17,22 @@ import java.util.UUID;
@Repository("databaseCtx")
public class DatabaseContext<T extends DataEntity<T>> {
@Autowired
@PersistenceContext
private EntityManager entityManager;
@Autowired
public DatabaseContext(EntityManagerFactory entityManagerFactory) {
this.entityManager = entityManagerFactory.createEntityManager();
}
public QueryableList<T> getQueryable(Class<T> type) {
return new QueryableHibernateList<>(this.entityManager, type).setEntity(type);
}
@Transactional
public T createOrUpdate(T item, Class<T> type) {
EntityManager entityManager = this.entityManager;
if (item.getKeys()[0] != null) {
T oldItem = entityManager.find(type, item.getKeys()[0]);
if(oldItem!=null) {
@ -39,6 +47,7 @@ public class DatabaseContext<T extends DataEntity<T>> {
}
public long count(Class<T> entityClass) {
EntityManager entityManager = this.entityManager;
return ((Number) entityManager.createQuery("select count(e) from " + entityClass.getSimpleName() + " e").getSingleResult()).longValue();
}

1
dmp-backend/src/main/java/eu/eudat/dao/databaselayer/service/DatabaseService.java
View File

@ -6,6 +6,7 @@ import eu.eudat.entities.DataEntity;
import eu.eudat.queryable.QueryableList;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.stereotype.Service;
import org.springframework.transaction.annotation.Transactional;
import java.util.Set;
import java.util.UUID;

14
dmp-backend/src/main/java/eu/eudat/dao/entities/DMPDaoImpl.java
View File

@ -1,9 +1,11 @@
package eu.eudat.dao.entities;
import java.util.Arrays;
import java.util.UUID;
import eu.eudat.dao.DatabaseAccess;
import eu.eudat.dao.databaselayer.service.DatabaseService;
import eu.eudat.entities.Dataset;
import eu.eudat.entities.DatasetProfile;
import eu.eudat.entities.UserInfo;
import eu.eudat.models.criteria.DataManagementPlanCriteria;
@ -34,6 +36,8 @@ public class DMPDaoImpl extends DatabaseAccess<DMP> implements DMPDao {
query.where((builder, root) -> builder.greaterThan(root.get("created"), criteria.getPeriodStart()));
if (criteria.getProjects() != null && !criteria.getProjects().isEmpty())
query.where(((builder, root) -> root.get("project").in(criteria.getProjectEntities())));
query.where((builder, root) -> builder.notEqual(root.get("status"), DMP.DMPStatus.DELETED.getValue()));
query.where((builder, root) -> builder.not(root.get("id").in(query.subQuery((builder1, root1) -> root1.get("previous").isNotNull(), Arrays.asList("previous")))));
return query;
}
@ -61,11 +65,6 @@ public class DMPDaoImpl extends DatabaseAccess<DMP> implements DMPDao {
return query;
}
@Override
public Long count() {
return this.getDatabaseService().count(DMP.class);
}
@Override
public void delete(DMP item) {
this.getDatabaseService().delete(item);
@ -75,4 +74,9 @@ public class DMPDaoImpl extends DatabaseAccess<DMP> implements DMPDao {
public QueryableList<DMP> asQueryable() {
return this.getDatabaseService().getQueryable(DMP.class);
}
@Override
public Long count() {
return this.getDatabaseService().count(DMP.class);
}
}

6
dmp-backend/src/main/java/eu/eudat/dao/entities/DatasetDao.java
View File

@ -1,6 +1,7 @@
package eu.eudat.dao.entities;
import java.util.UUID;
import java.util.concurrent.CompletableFuture;
import eu.eudat.dao.DatabaseAccessLayer;
import eu.eudat.entities.DataRepository;
@ -8,6 +9,7 @@ import eu.eudat.entities.Dataset;
import eu.eudat.entities.UserInfo;
import eu.eudat.models.criteria.DatasetCriteria;
import eu.eudat.queryable.QueryableList;
import org.springframework.transaction.annotation.Transactional;
public interface DatasetDao extends DatabaseAccessLayer<Dataset,UUID> {
@ -15,5 +17,9 @@ public interface DatasetDao extends DatabaseAccessLayer<Dataset,UUID> {
QueryableList<Dataset> getAuthenticated(QueryableList<Dataset> query, UserInfo principal);
CompletableFuture<Dataset> createOrUpdateAsync(Dataset item);
Dataset find(UUID id,String hint);
Long count();
}

30
dmp-backend/src/main/java/eu/eudat/dao/entities/DatasetDaoImpl.java
View File

@ -1,6 +1,7 @@
package eu.eudat.dao.entities;
import java.util.UUID;
import java.util.concurrent.CompletableFuture;
import eu.eudat.dao.DatabaseAccess;
import eu.eudat.dao.databaselayer.service.DatabaseService;
@ -11,6 +12,7 @@ import eu.eudat.models.criteria.DatasetCriteria;
import eu.eudat.queryable.QueryableList;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.stereotype.Component;
import org.springframework.transaction.annotation.Transactional;
@Component("datasetDao")
public class DatasetDaoImpl extends DatabaseAccess<Dataset> implements DatasetDao {
@ -21,18 +23,23 @@ public class DatasetDaoImpl extends DatabaseAccess<Dataset> implements DatasetDa
@Override
public QueryableList<Dataset> getWithCriteria(DatasetCriteria criteria) {
QueryableList<Dataset> query = getDatabaseService().getQueryable(Dataset.getHints(),Dataset.class);
if (criteria.getLike() != null && !criteria.getLike().isEmpty()) query.where((builder, root) -> builder.like(root.get("label"), "%" + criteria.getLike() + "%"));
if (criteria.getStatus() != null) query.where((builder, root) -> builder.equal(root.get("status"), criteria.getStatus()));
if (criteria.getPeriodEnd() != null) query.where((builder, root) -> builder.lessThan(root.get("created"), criteria.getPeriodEnd()));
if (criteria.getPeriodStart() != null) query.where((builder, root) -> builder.greaterThan(root.get("created"), criteria.getPeriodStart()));
if (criteria.getDmpIds() != null && !criteria.getDmpIds().isEmpty()) query.where((builder, root) -> root.get("dmp").get("id").in(criteria.getDmpIds()));
QueryableList<Dataset> query = getDatabaseService().getQueryable(Dataset.getHints(), Dataset.class);
if (criteria.getLike() != null && !criteria.getLike().isEmpty())
query.where((builder, root) -> builder.like(root.get("label"), "%" + criteria.getLike() + "%"));
if (criteria.getStatus() != null)
query.where((builder, root) -> builder.equal(root.get("status"), criteria.getStatus()));
if (criteria.getPeriodEnd() != null)
query.where((builder, root) -> builder.lessThan(root.get("created"), criteria.getPeriodEnd()));
if (criteria.getPeriodStart() != null)
query.where((builder, root) -> builder.greaterThan(root.get("created"), criteria.getPeriodStart()));
if (criteria.getDmpIds() != null && !criteria.getDmpIds().isEmpty())
query.where((builder, root) -> root.get("dmp").get("id").in(criteria.getDmpIds()));
return query;
}
@Override
public Dataset createOrUpdate(Dataset item) {
return getDatabaseService().createOrUpdate(item,Dataset.class);
return getDatabaseService().createOrUpdate(item, Dataset.class);
}
@Override
@ -40,6 +47,11 @@ public class DatasetDaoImpl extends DatabaseAccess<Dataset> implements DatasetDa
return getDatabaseService().getQueryable(Dataset.class).where((builder, root) -> builder.equal((root.get("id")), id)).getSingle();
}
@Override
public Dataset find(UUID id,String hint) {
return getDatabaseService().getQueryable(Dataset.getHints(),Dataset.class).withHint(hint).where((builder, root) -> builder.equal((root.get("id")), id)).getSingle();
}
@Override
public QueryableList<Dataset> getAuthenticated(QueryableList<Dataset> query, UserInfo principal) {
query.where((builder, root) -> builder.or(builder.equal(root.get("dmp").get("creator"), principal), builder.isMember(principal, root.get("dmp").get("users"))
@ -61,4 +73,8 @@ public class DatasetDaoImpl extends DatabaseAccess<Dataset> implements DatasetDa
public QueryableList<Dataset> asQueryable() {
return this.getDatabaseService().getQueryable(Dataset.class);
}
public CompletableFuture<Dataset> createOrUpdateAsync(Dataset item) {
return CompletableFuture.supplyAsync(() -> this.createOrUpdate(item));
}
}

7
dmp-backend/src/main/java/eu/eudat/dao/entities/InvitationDaoImpl.java
View File

@ -1,4 +1,5 @@
package eu.eudat.dao.entities;
import eu.eudat.dao.DatabaseAccess;
import eu.eudat.dao.databaselayer.service.DatabaseService;
import eu.eudat.entities.DMP;
@ -13,7 +14,7 @@ import java.util.UUID;
@Service("invitationDao")
public class InvitationDaoImpl extends DatabaseAccess<Invitation> implements InvitationDao{
public class InvitationDaoImpl extends DatabaseAccess<Invitation> implements InvitationDao {
@Autowired
public InvitationDaoImpl(DatabaseService<Invitation> databaseService) {
@ -27,12 +28,12 @@ public class InvitationDaoImpl extends DatabaseAccess<Invitation> implements Inv
@Override
public Invitation createOrUpdate(Invitation item) {
return this.getDatabaseService().createOrUpdate(item,Invitation.class);
return this.getDatabaseService().createOrUpdate(item, Invitation.class);
}
@Override
public Invitation find(UUID id) {
return this.getDatabaseService().getQueryable(Invitation.class).where((builder, root) -> builder.equal(root.get("id"),id)).getSingle();
return this.getDatabaseService().getQueryable(Invitation.class).where((builder, root) -> builder.equal(root.get("id"), id)).getSingle();
}
@Override

1
dmp-backend/src/main/java/eu/eudat/dao/entities/UserRoleDao.java
View File

@ -13,5 +13,6 @@ import java.util.UUID;
public interface UserRoleDao extends DatabaseAccessLayer<UserRole, UUID> {
QueryableList<UserRole> getWithCriteria(UserRoleCriteria criteria);
List<UserRole> getUserRoles(UserInfo userInfo);
}

4
dmp-backend/src/main/java/eu/eudat/dao/entities/security/UserTokenDaoImpl.java
View File

@ -20,12 +20,12 @@ public class UserTokenDaoImpl extends DatabaseAccess<UserToken> implements UserT
@Override
public UserToken createOrUpdate(UserToken item) {
return this.getDatabaseService().createOrUpdate(item,UserToken.class);
return this.getDatabaseService().createOrUpdate(item, UserToken.class);
}
@Override
public UserToken find(UUID id) {
return this.getDatabaseService().getQueryable(UserToken.class).where((builder, root) -> builder.equal(root.get("token"),id)).getSingleOrDefault();
return this.getDatabaseService().getQueryable(UserToken.class).where((builder, root) -> builder.equal(root.get("token"), id)).getSingleOrDefault();
}
@Override

28
dmp-backend/src/main/java/eu/eudat/entities/DMP.java
View File

@ -6,6 +6,7 @@ import java.util.*;
import javax.persistence.*;
import eu.eudat.types.Authorities;
import org.hibernate.annotations.GenericGenerator;
import org.hibernate.annotations.Type;
@ -19,7 +20,7 @@ import com.fasterxml.jackson.annotation.ObjectIdGenerators;
@NamedEntityGraph(
name = "dataManagementPlanListingModel",
attributeNodes = {@NamedAttributeNode("organisations"), @NamedAttributeNode("researchers"),
@NamedAttributeNode("project"), @NamedAttributeNode("profile"),@NamedAttributeNode("dataset")}
@NamedAttributeNode("project"), @NamedAttributeNode("profile"), @NamedAttributeNode("dataset")}
),
@NamedEntityGraph(
name = "fullyDetailed",
@ -29,6 +30,31 @@ import com.fasterxml.jackson.annotation.ObjectIdGenerators;
})
public class DMP implements Serializable, DataEntity<DMP> {
public enum DMPStatus {
ACTIVE((short) 0), DELETED((short) 1);
private short value;
private DMPStatus(short value) {
this.value = value;
}
public short getValue() {
return value;
}
public static DMPStatus fromInteger(short value) {
switch (value) {
case 0:
return ACTIVE;
case 1:
return DELETED;
default:
throw new RuntimeException("Unsupported DMP Status");
}
}
}
public static Set<String> getHints() {
return hints;
}

446
dmp-backend/src/main/java/eu/eudat/entities/Dataset.java
View File

@ -15,305 +15,307 @@ import com.fasterxml.jackson.annotation.JsonIdentityInfo;
import com.fasterxml.jackson.annotation.ObjectIdGenerators;
@Entity
@Table(name="\"Dataset\"")
@Table(name = "\"Dataset\"")
@NamedEntityGraphs({
@NamedEntityGraph(
name = "datasetListingModel",
attributeNodes = {@NamedAttributeNode("services"),@NamedAttributeNode("dataRepositories"),@NamedAttributeNode("registries"),
@NamedAttributeNode("dmp"),@NamedAttributeNode("profile"),@NamedAttributeNode("creator")})
@NamedEntityGraph(
name = "datasetListingModel",
attributeNodes = {@NamedAttributeNode("services"), @NamedAttributeNode("dataRepositories"), @NamedAttributeNode("externalDatasets"), @NamedAttributeNode("registries"),
@NamedAttributeNode("dmp"), @NamedAttributeNode("profile"), @NamedAttributeNode("creator")})
})
public class Dataset implements DataEntity<Dataset> {
public static Set<String> getHints() {
return hints;
}
private static final Set<String> hints = new HashSet<>(Arrays.asList("datasetListingModel"));
public static Set<String> getHints() {
return hints;
}
public enum Status {
SAVED((short) 0), FINALISED((short) 1), DELETED((short) 99);
private static final Set<String> hints = new HashSet<>(Arrays.asList("datasetListingModel"));
private short value;
public enum Status {
SAVED((short) 0), FINALISED((short) 1), DELETED((short) 99);
private Status(short value) {
this.value = value;
}
private short value;
public short getValue() {
return value;
}
private Status(short value) {
this.value = value;
}
public static Dataset.Status fromInteger(int value) {
switch (value) {
case 0:
return SAVED;
case 1:
return FINALISED;
default:
throw new RuntimeException("Unsupported Project Status");
}
}
}
@Id
@GeneratedValue
public short getValue() {
return value;
}
public static Dataset.Status fromInteger(int value) {
switch (value) {
case 0:
return SAVED;
case 1:
return FINALISED;
default:
throw new RuntimeException("Unsupported Project Status");
}
}
}
@Id
@GeneratedValue
@GenericGenerator(name = "uuid2", strategy = "uuid2")
@Column(name = "\"ID\"", updatable = false, nullable = false, columnDefinition = "BINARY(16)")
private UUID id;
@Column(name = "\"Label\"")
private String label;
@ManyToOne(fetch = FetchType.LAZY)
private UUID id;
@Column(name = "\"Label\"")
private String label;
@ManyToOne(fetch = FetchType.LAZY)
// @Cascade(value=org.hibernate.annotations.CascadeType.ALL)
@JoinColumn(name = "\"DMP\"", nullable = true)
private DMP dmp;
private DMP dmp;
@Column(name = "\"Uri\"")
private String uri;
@Type(type="eu.eudat.typedefinition.XMLType")
@Column(name = "\"Properties\"", columnDefinition = "xml", nullable = true)
private String properties;
@ManyToOne(fetch = FetchType.LAZY)
//@Cascade(value=org.hibernate.annotations.CascadeType.ALL)
@Column(name = "\"Uri\"")
private String uri;
@Type(type = "eu.eudat.typedefinition.XMLType")
@Column(name = "\"Properties\"", columnDefinition = "xml", nullable = true)
private String properties;
@ManyToOne(fetch = FetchType.LAZY)
//@Cascade(value=org.hibernate.annotations.CascadeType.ALL)
@JoinColumn(name = "\"Profile\"", nullable = true)
private DatasetProfile profile;
@Type(type="eu.eudat.typedefinition.XMLType")
@Column(name = "\"Reference\"", columnDefinition = "xml", nullable = true)
private String reference;
@OneToMany(fetch = FetchType.LAZY)
@JoinTable(name="\"DatasetDataRepository\"",
joinColumns={@JoinColumn(name="\"Dataset\"", referencedColumnName="\"ID\"")},
inverseJoinColumns={@JoinColumn(name="\"DataRepository\"", referencedColumnName="\"ID\"")}
)
private DatasetProfile profile;
@Type(type = "eu.eudat.typedefinition.XMLType")
@Column(name = "\"Reference\"", columnDefinition = "xml", nullable = true)
private String reference;
@OneToMany(fetch = FetchType.LAZY)
@JoinTable(name = "\"DatasetDataRepository\"",
joinColumns = {@JoinColumn(name = "\"Dataset\"", referencedColumnName = "\"ID\"")},
inverseJoinColumns = {@JoinColumn(name = "\"DataRepository\"", referencedColumnName = "\"ID\"")}
)
private Set<DataRepository> dataRepositories;
@OneToMany(fetch = FetchType.LAZY)
@JoinTable(name="\"DatasetRegistry\"",
joinColumns={@JoinColumn(name="\"Dataset\"", referencedColumnName="\"ID\"")},
inverseJoinColumns={@JoinColumn(name="\"Registry\"", referencedColumnName="\"ID\"")}
)
@OneToMany(fetch = FetchType.LAZY)
@JoinTable(name = "\"DatasetRegistry\"",
joinColumns = {@JoinColumn(name = "\"Dataset\"", referencedColumnName = "\"ID\"")},
inverseJoinColumns = {@JoinColumn(name = "\"Registry\"", referencedColumnName = "\"ID\"")}
)
private Set<Registry> registries;
@OneToMany(fetch = FetchType.LAZY)
@JoinTable(name="\"DatasetService\"",
joinColumns={@JoinColumn(name="\"Dataset\"", referencedColumnName="\"ID\"")},
inverseJoinColumns={@JoinColumn(name="\"Service\"", referencedColumnName="\"ID\"")}
)
@OneToMany(fetch = FetchType.LAZY)
@JoinTable(name = "\"DatasetService\"",
joinColumns = {@JoinColumn(name = "\"Dataset\"", referencedColumnName = "\"ID\"")},
inverseJoinColumns = {@JoinColumn(name = "\"Service\"", referencedColumnName = "\"ID\"")}
)
private Set<Service> services;
@OneToMany(fetch = FetchType.LAZY)
@JoinTable(name="\"DatasetExternalDataset\"",
joinColumns={@JoinColumn(name="\"Dataset\"", referencedColumnName="\"ID\"")},
inverseJoinColumns={@JoinColumn(name="\"ExternalDataset\"", referencedColumnName="\"Id\"")}
)
private Set<ExternalDataset> externalDatasets;
@Column(name = "\"Status\"", nullable = false)
private Short status;
@OneToMany(fetch = FetchType.LAZY)
@JoinTable(name = "\"DatasetExternalDataset\"",
joinColumns = {@JoinColumn(name = "\"Dataset\"", referencedColumnName = "\"ID\"")},
inverseJoinColumns = {@JoinColumn(name = "\"ExternalDataset\"", referencedColumnName = "\"Id\"")}
)
private Set<ExternalDataset> externalDatasets;
@Column(name = "\"IsPublic\"", nullable = false)
private boolean isPublic;
@Column(name = "\"Created\"")
private Date created = null;
@Column(name = "\"Modified\"")
private Date modified = new Date();
@Column(name = "\"Status\"", nullable = false)
private Short status;
@Column(name = "\"IsPublic\"", nullable = false)
private boolean isPublic;
@Column(name = "\"Created\"")
private Date created = null;
@Column(name = "\"Modified\"")
private Date modified = new Date();
@ManyToOne(fetch = FetchType.LAZY)
@JoinColumn(name = "\"Creator\"", nullable = true)
private UserInfo creator;
@Column(name = "\"Description\"")
private String description;
public String getDescription() {
return description;
}
public void setDescription(String description) {
this.description = description;
}
private UserInfo creator;
public UserInfo getCreator() {
return creator;
}
public void setCreator(UserInfo creator) {
this.creator = creator;
}
public Short getStatus() {
return status;
}
@Column(name = "\"Description\"")
private String description;
public void setStatus(Short status) {
this.status = status;
}
public String getDescription() {
return description;
}
public void setDescription(String description) {
this.description = description;
}
public Date getCreated() {
return created;
}
public UserInfo getCreator() {
return creator;
}
public void setCreator(UserInfo creator) {
this.creator = creator;
}
public Short getStatus() {
return status;
}
public void setCreated(Date created) {
this.created = created;
}
public void setStatus(Short status) {
this.status = status;
}
public Date getModified() {
return modified;
}
public Date getCreated() {
return created;
}
public void setModified(Date modified) {
this.modified = modified;
}
public void setCreated(Date created) {
this.created = created;
}
public Set<Registry> getRegistries() {
return registries;
}
public Date getModified() {
return modified;
}
public void setRegistries(Set<Registry> registries) {
this.registries = registries;
}
public void setModified(Date modified) {
this.modified = modified;
}
public Set<Service> getServices() {
return services;
}
public Set<Registry> getRegistries() {
return registries;
}
public void setServices(Set<Service> services) {
this.services = services;
}
public void setRegistries(Set<Registry> registries) {
this.registries = registries;
}
public UUID getId() {
return id;
}
public Set<Service> getServices() {
return services;
}
public void setId(UUID id) {
this.id = id;
}
public void setServices(Set<Service> services) {
this.services = services;
}
public String getLabel() {
return label;
}
public UUID getId() {
return id;
}
public void setLabel(String label) {
this.label = label;
}
public DMP getDmp() {
return dmp;
}
public void setId(UUID id) {
this.id = id;
}
public void setDmp(DMP dmp) {
this.dmp = dmp;
}
public String getLabel() {
return label;
}
public String getUri() {
return uri;
}
public void setLabel(String label) {
this.label = label;
}
public void setUri(String uri) {
this.uri = uri;
}
public DMP getDmp() {
return dmp;
}
public String getProperties() {
return properties;
}
public void setDmp(DMP dmp) {
this.dmp = dmp;
}
public void setProperties(String properties) {
this.properties = properties;
}
public String getUri() {
return uri;
}
public DatasetProfile getProfile() {
return profile;
}
public void setUri(String uri) {
this.uri = uri;
}
public void setProfile(DatasetProfile profile) {
this.profile = profile;
}
public String getProperties() {
return properties;
}
public Set<DataRepository> getDataRepositories() {
return dataRepositories;
}
public void setProperties(String properties) {
this.properties = properties;
}
public void setDataRepositories(Set<DataRepository> dataRepositories) {
this.dataRepositories = dataRepositories;
}
public DatasetProfile getProfile() {
return profile;
}
public String getReference() {
return reference;
}
public void setProfile(DatasetProfile profile) {
this.profile = profile;
}
public void setReference(String reference) {
this.reference = reference;
}
public Set<DataRepository> getDataRepositories() {
return dataRepositories;
}
public Set<ExternalDataset> getExternalDatasets() {
return externalDatasets;
}
public void setExternalDatasets(Set<ExternalDataset> externalDatasets) {
this.externalDatasets = externalDatasets;
}
public void setDataRepositories(Set<DataRepository> dataRepositories) {
this.dataRepositories = dataRepositories;
}
public boolean isPublic() {
return isPublic;
}
public void setPublic(boolean aPublic) {
isPublic = aPublic;
}
public String getReference() {
return reference;
}
@Override
public void update(Dataset entity) {
this.setRegistries(entity.getRegistries());
this.setDataRepositories(entity.getDataRepositories());
this.setDescription(entity.getDescription());
this.setLabel(entity.getLabel());
this.setProperties(entity.getProperties());
this.setExternalDatasets(entity.getExternalDatasets());
this.setStatus(entity.getStatus());
if(entity.getCreator()!=null) this.creator = entity.getCreator();
}
@Override
public Object[] getKeys() {
return new UUID[]{this.id == null ? null : this.id};
}
public void setReference(String reference) {
this.reference = reference;
}
public Set<ExternalDataset> getExternalDatasets() {
return externalDatasets;
}
public void setExternalDatasets(Set<ExternalDataset> externalDatasets) {
this.externalDatasets = externalDatasets;
}
public boolean isPublic() {
return isPublic;
}
public void setPublic(boolean aPublic) {
isPublic = aPublic;
}
@Override
public void update(Dataset entity) {
this.setRegistries(entity.getRegistries());
this.setDataRepositories(entity.getDataRepositories());
this.setDescription(entity.getDescription());
this.setLabel(entity.getLabel());
this.setProperties(entity.getProperties());
this.setExternalDatasets(entity.getExternalDatasets());
this.setStatus(entity.getStatus());
this.setProfile(entity.getProfile());
if (entity.getCreator() != null) this.creator = entity.getCreator();
}
@Override
public Object[] getKeys() {
return new UUID[]{this.id == null ? null : this.id};
}
}

22
dmp-backend/src/main/java/eu/eudat/exceptions/datamanagementplan/DMPWithDatasetsException.java Normal file
View File

@ -0,0 +1,22 @@
package eu.eudat.exceptions.datamanagementplan;
/**
* Created by ikalyvas on 2/5/2018.
*/
public class DMPWithDatasetsException extends RuntimeException {
public DMPWithDatasetsException() {
super();
}
public DMPWithDatasetsException(String message, Throwable cause) {
super(message, cause);
}
public DMPWithDatasetsException(String message) {
super(message);
}
public DMPWithDatasetsException(Throwable cause) {
super(cause);
}
}

2
dmp-backend/src/main/java/eu/eudat/exceptions/NonValidTokenException.java → dmp-backend/src/main/java/eu/eudat/exceptions/security/NonValidTokenException.java
View File

@ -1,4 +1,4 @@
package eu.eudat.exceptions;
package eu.eudat.exceptions.security;
public class NonValidTokenException extends Exception {

2
dmp-backend/src/main/java/eu/eudat/exceptions/UnauthorisedException.java → dmp-backend/src/main/java/eu/eudat/exceptions/security/UnauthorisedException.java
View File

@ -1,4 +1,4 @@
package eu.eudat.exceptions;
package eu.eudat.exceptions.security;
import org.springframework.http.HttpStatus;
import org.springframework.web.bind.annotation.ResponseStatus;

4
dmp-backend/src/main/java/eu/eudat/handlers/PrincipalArgumentResolver.java
View File

@ -1,6 +1,6 @@
package eu.eudat.handlers;
import eu.eudat.exceptions.UnauthorisedException;
import eu.eudat.exceptions.security.UnauthorisedException;
import eu.eudat.models.security.Principal;
import eu.eudat.security.claims.ClaimedAuthorities;
import eu.eudat.services.AuthenticationService;
@ -14,8 +14,6 @@ import org.springframework.web.method.support.ModelAndViewContainer;
import java.lang.annotation.Annotation;
import java.util.*;
import static eu.eudat.types.Authorities.USER;
public final class PrincipalArgumentResolver implements HandlerMethodArgumentResolver {

99
dmp-backend/src/main/java/eu/eudat/managers/DataManagementPlanManager.java
View File

@ -1,27 +1,29 @@
package eu.eudat.managers;
import java.util.List;
import java.util.UUID;
import java.util.*;
import java.util.concurrent.CompletableFuture;
import java.util.stream.Collectors;
import eu.eudat.dao.entities.*;
import eu.eudat.entities.DMP;
import eu.eudat.entities.Project;
import eu.eudat.entities.UserInfo;
import eu.eudat.exceptions.UnauthorisedException;
import eu.eudat.entities.*;
import eu.eudat.exceptions.datamanagementplan.DMPWithDatasetsException;
import eu.eudat.exceptions.security.UnauthorisedException;
import eu.eudat.models.HintedModelFactory;
import eu.eudat.models.criteria.OrganisationCriteria;
import eu.eudat.models.criteria.ProjectCriteria;
import eu.eudat.models.criteria.ResearcherCriteria;
import eu.eudat.models.dmp.DataManagementPlan;
import eu.eudat.models.dmp.DataManagementPlanCriteriaRequest;
import eu.eudat.models.dmp.DataManagementPlanNewVersionModel;
import eu.eudat.models.dmp.DataManagementPlanTableRequest;
import eu.eudat.models.helpers.common.DataTableData;
import eu.eudat.models.listingmodels.DataManagementPlanListingModel;
import eu.eudat.models.listingmodels.DatasetListingModel;
import eu.eudat.models.security.Principal;
import eu.eudat.queryable.QueryableList;
import eu.eudat.services.ApiContext;
import eu.eudat.utilities.builders.DomainModelConverter;
import org.springframework.scheduling.annotation.Async;
public class DataManagementPlanManager {
@ -32,10 +34,17 @@ public class DataManagementPlanManager {
QueryableList<DMP> authItems = apiContext.getDatabaseRepository().getDmpDao().getAuthenticated(items, userInfo);
QueryableList<DMP> pagedItems = PaginationManager.applyPaging(authItems, dataManagementPlanTableRequest);
List<DataManagementPlanListingModel> datamanagementPlans = new DomainModelConverter<eu.eudat.entities.DMP, DataManagementPlanListingModel>().fromDataModel(pagedItems.withHint(HintedModelFactory.getHint(DataManagementPlanListingModel.class)).toList(), DataManagementPlanListingModel.class);
DataTableData<DataManagementPlanListingModel> dataTable = new DataTableData<DataManagementPlanListingModel>();
dataTable.setData(datamanagementPlans);
dataTable.setTotalCount(items.count());
CompletableFuture itemsFuture = pagedItems.withHint(HintedModelFactory.getHint(DataManagementPlanListingModel.class)).toListAsync().whenComplete((resultList, throwable) -> {
List<DataManagementPlanListingModel> datamanagementPlans = new DomainModelConverter<DMP, DataManagementPlanListingModel>().fromDataModel(resultList, DataManagementPlanListingModel.class);
dataTable.setData(datamanagementPlans);
});
CompletableFuture countFuture = items.countAsync().whenComplete((count, throwable) -> {
dataTable.setTotalCount(count);
});
CompletableFuture.allOf(itemsFuture, countFuture).join();
return dataTable;
}
@ -65,17 +74,29 @@ public class DataManagementPlanManager {
}
public static void clone(ApiContext apiContext, UUID uuid, DataManagementPlan dataManagementPlan, Principal principal) throws Exception {
DMP oldDmp = new DMP();
oldDmp.setId(uuid);
public static void newVersion(ApiContext apiContext, UUID uuid, DataManagementPlanNewVersionModel dataManagementPlan, Principal principal) throws Exception {
DMP oldDmp = apiContext.getDatabaseRepository().getDmpDao().find(uuid);
DMP newDmp = dataManagementPlan.toDataModel();
createOrganisationsIfTheyDontExist(newDmp, apiContext.getDatabaseRepository().getOrganisationDao());
createResearchersIfTheyDontExist(newDmp, apiContext.getDatabaseRepository().getResearcherDao());
UserInfo user = apiContext.getDatabaseRepository().getUserInfoDao().find(principal.getId());
UserInfo user = new UserInfo();
user.setId(principal.getId());
createProjectIfItDoesntExist(newDmp, apiContext.getDatabaseRepository().getProjectDao(), user);
newDmp.setCreator(user);
newDmp.setPrevious(oldDmp);
apiContext.getDatabaseRepository().getDmpDao().createOrUpdate(newDmp);
newDmp.setVersion(oldDmp.getVersion() + 1);
newDmp.setId(null);
newDmp = apiContext.getDatabaseRepository().getDmpDao().createOrUpdate(newDmp);
copyDatasets(newDmp, apiContext.getDatabaseRepository().getDatasetDao());
}
public static void delete(ApiContext apiContext, UUID uuid) throws DMPWithDatasetsException {
DMP oldDmp = apiContext.getDatabaseRepository().getDmpDao().find(uuid);
if (oldDmp.getDataset().size() > 0)
throw new DMPWithDatasetsException("You cannot Remove Datamanagement Plan with Datasets");
oldDmp.setStatus(DMP.DMPStatus.DELETED.getValue());
apiContext.getDatabaseRepository().getDmpDao().createOrUpdate(oldDmp);
}
private static void createResearchersIfTheyDontExist(DMP newDmp, ResearcherDao researcherRepository) {
@ -115,4 +136,54 @@ public class DataManagementPlanManager {
}
}
}
@Async
private static void copyDatasets(DMP newDmp, DatasetDao datasetDao) {
List<CompletableFuture<Dataset>> futures = new LinkedList<>();
for (Dataset dataset : newDmp.getDataset()) {
CompletableFuture.supplyAsync(() -> {
Dataset entityDataset = datasetDao.find(dataset.getId(), HintedModelFactory.getHint(DatasetListingModel.class));
Dataset newDataset = new Dataset();
newDataset.update(entityDataset);
newDataset.setDmp(newDmp);
if (newDataset.getDataRepositories() != null) {
newDataset.setDataRepositories(newDataset.getDataRepositories().stream().map(item -> {
DataRepository dataRepository = new DataRepository();
dataRepository.setId(item.getId());
return dataRepository;
}).collect(Collectors.toSet()));
}
if (newDataset.getExternalDatasets() != null) {
newDataset.setExternalDatasets(newDataset.getExternalDatasets().stream().map(item -> {
ExternalDataset externalDataset = new ExternalDataset();
externalDataset.setId(item.getId());
return externalDataset;
}).collect(Collectors.toSet()));
}
if (newDataset.getRegistries() != null) {
newDataset.setRegistries(newDataset.getRegistries().stream().map(item -> {
Registry registry = new Registry();
registry.setId(item.getId());
return registry;
}).collect(Collectors.toSet()));
}
if (newDataset.getServices() != null) {
newDataset.setServices(newDataset.getServices().stream().map(item -> {
Service service = new Service();
service.setId(item.getId());
return service;
}).collect(Collectors.toSet()));
}
newDataset.setCreated(new Date());
return newDataset;
}).thenApplyAsync(item -> {
futures.add(datasetDao.createOrUpdateAsync(item));
return futures;
}).join();
}
}
}

16
dmp-backend/src/main/java/eu/eudat/managers/DatasetManager.java
View File

@ -1,6 +1,7 @@
package eu.eudat.managers;
import eu.eudat.dao.entities.*;
import eu.eudat.entities.Dataset;
import eu.eudat.entities.UserInfo;
import eu.eudat.models.HintedModelFactory;
import eu.eudat.models.criteria.DataRepositoryCriteria;
@ -23,6 +24,7 @@ import java.util.HashMap;
import java.util.List;
import java.util.Map;
import java.util.UUID;
import java.util.concurrent.CompletableFuture;
public class DatasetManager {
@ -33,10 +35,18 @@ public class DatasetManager {
QueryableList<eu.eudat.entities.Dataset> items = apiContext.getDatabaseRepository().getDatasetDao().getWithCriteria(datasetTableRequest.getCriteria());
QueryableList<eu.eudat.entities.Dataset> authItems = apiContext.getDatabaseRepository().getDatasetDao().getAuthenticated(items, userInfo);
QueryableList<eu.eudat.entities.Dataset> pagedItems = PaginationManager.applyPaging(authItems, datasetTableRequest);
List<DatasetListingModel> datasets = new DomainModelConverter<eu.eudat.entities.Dataset, DatasetListingModel>().fromDataModel(pagedItems.withHint(HintedModelFactory.getHint(DatasetListingModel.class)).toList(), DatasetListingModel.class);
DataTableData<DatasetListingModel> dataTable = new DataTableData<DatasetListingModel>();
dataTable.setData(datasets);
dataTable.setTotalCount(items.count());
CompletableFuture<List<Dataset>> itemsFuture = pagedItems.withHint(HintedModelFactory.getHint(DatasetListingModel.class)).toListAsync().whenComplete((resultList,throwable)->{
List<DatasetListingModel> datasets = new DomainModelConverter<eu.eudat.entities.Dataset, DatasetListingModel>().fromDataModel(resultList, DatasetListingModel.class);
dataTable.setData(datasets);
});
CompletableFuture countFuture = items.countAsync().whenComplete((count, throwable) -> {
dataTable.setTotalCount(count);
});
CompletableFuture.allOf(itemsFuture,countFuture).join();
return dataTable;
}

4
dmp-backend/src/main/java/eu/eudat/managers/InvitationsManager.java
View File

@ -2,7 +2,7 @@ package eu.eudat.managers;
import eu.eudat.entities.DMP;
import eu.eudat.entities.UserInfo;
import eu.eudat.exceptions.UnauthorisedException;
import eu.eudat.exceptions.security.UnauthorisedException;
import eu.eudat.models.invitation.Invitation;
import eu.eudat.models.security.Principal;
import eu.eudat.models.userinfo.UserInfoInvitationModel;
@ -11,8 +11,6 @@ import eu.eudat.queryable.QueryableList;
import eu.eudat.services.ApiContext;
import eu.eudat.utilities.builders.DomainModelConverter;
import java.text.ParseException;
import java.util.Arrays;
import java.util.List;
import java.util.UUID;
import java.util.stream.Collectors;

13
dmp-backend/src/main/java/eu/eudat/managers/ProjectManager.java
View File

@ -4,6 +4,7 @@ import java.text.ParseException;
import java.util.List;
import java.util.Map;
import java.util.UUID;
import java.util.concurrent.CompletableFuture;
import eu.eudat.dao.entities.ProjectDao;
import eu.eudat.dao.entities.UserInfoDao;
@ -26,10 +27,16 @@ public class ProjectManager {
public DataTableData<eu.eudat.models.project.ProjectListingModel> getPaged(ProjectDao projectRepository, ProjectTableRequest projectTableRequest) throws Exception {
QueryableList<eu.eudat.entities.Project> items = projectRepository.getWithCriteria(projectTableRequest.getCriteria());
QueryableList<eu.eudat.entities.Project> pagedItems = PaginationManager.applyPaging(items, projectTableRequest);
List<eu.eudat.models.project.ProjectListingModel> projects = new DomainModelConverter<eu.eudat.entities.Project, ProjectListingModel>().fromDataModel(pagedItems.toList(), eu.eudat.models.project.ProjectListingModel.class);
DataTableData<eu.eudat.models.project.ProjectListingModel> dataTable = new DataTableData<eu.eudat.models.project.ProjectListingModel>();
dataTable.setData(projects);
dataTable.setTotalCount(items.count());
CompletableFuture projectsFuture = pagedItems.toListAsync().whenComplete((results, throwable) -> {
List<eu.eudat.models.project.ProjectListingModel> projects = new DomainModelConverter<eu.eudat.entities.Project, ProjectListingModel>().fromDataModel(results, eu.eudat.models.project.ProjectListingModel.class);
dataTable.setData(projects);
});
CompletableFuture countFuture = pagedItems.countAsync().whenComplete((count, throwable) -> dataTable.setTotalCount(count));
CompletableFuture.allOf(projectsFuture,countFuture).join();
return dataTable;
}

19
dmp-backend/src/main/java/eu/eudat/managers/ResearcherManager.java Normal file
View File

@ -0,0 +1,19 @@
package eu.eudat.managers;
import eu.eudat.entities.Researcher;
import eu.eudat.services.ApiContext;
import eu.eudat.utilities.builders.DomainModelConverter;
import java.lang.reflect.Array;
import java.util.Arrays;
/**
* Created by ikalyvas on 2/5/2018.
*/
public class ResearcherManager {
public static Researcher create(ApiContext apiContext, eu.eudat.models.researcher.Researcher researcher) throws Exception {
Researcher researcherEntity = new DomainModelConverter<Researcher, eu.eudat.models.researcher.Researcher>().toDataModel(Arrays.asList(researcher)).get(0);
return apiContext.getDatabaseRepository().getResearcherDao().createOrUpdate(researcherEntity);
}
}

6
dmp-backend/src/main/java/eu/eudat/managers/UserManager.java
View File

@ -1,14 +1,11 @@
package eu.eudat.managers;
import eu.eudat.dao.entities.UserInfoDao;
import eu.eudat.dao.entities.UserRoleDao;
import eu.eudat.entities.Credential;
import eu.eudat.entities.UserRole;
import eu.eudat.exceptions.UnauthorisedException;
import eu.eudat.exceptions.security.UnauthorisedException;
import eu.eudat.models.helpers.common.DataTableData;
import eu.eudat.models.login.Credentials;
import eu.eudat.models.security.Principal;
import eu.eudat.models.userinfo.UserInfo;
import eu.eudat.models.userinfo.UserInfoTableRequestItem;
import eu.eudat.models.userinfo.UserListingModel;
import eu.eudat.queryable.QueryableList;
@ -20,7 +17,6 @@ import org.w3c.dom.Element;
import eu.eudat.utilities.builders.XmlBuilder;
import java.util.Arrays;
import java.util.List;
public class UserManager {

193
dmp-backend/src/main/java/eu/eudat/models/dmp/DataManagementPlanNewVersionModel.java Normal file
View File

@ -0,0 +1,193 @@
package eu.eudat.models.dmp;
import eu.eudat.entities.DMP;
import eu.eudat.models.DataModel;
import eu.eudat.models.dataset.Dataset;
import eu.eudat.models.project.Project;
import eu.eudat.models.userinfo.UserInfo;
import eu.eudat.utilities.builders.DomainModelConverter;
import eu.eudat.utilities.builders.XmlBuilder;
import org.w3c.dom.Document;
import org.w3c.dom.Element;
import java.lang.reflect.Array;
import java.util.*;
/**
* Created by ikalyvas on 2/5/2018.
*/
public class DataManagementPlanNewVersionModel implements DataModel<DMP> {
private UUID id;
private String label;
private DataManagementPlan previous;
private int version;
private int status;
private String description;
private List<AssociatedProfile> profiles;
private eu.eudat.models.project.Project project;
private List<Organisation> organisations;
private List<Researcher> researchers;
private List<UserInfo> associatedUsers;
private eu.eudat.models.userinfo.UserInfo creator;
private Date created;
private List<Dataset> datasets;
public UUID getId() {
return id;
}
public void setId(UUID id) {
this.id = id;
}
public String getLabel() {
return label;
}
public void setLabel(String label) {
this.label = label;
}
public DataManagementPlan getPrevious() {
return previous;
}
public void setPrevious(DataManagementPlan previous) {
this.previous = previous;
}
public int getVersion() {
return version;
}
public void setVersion(int version) {
this.version = version;
}
public int getStatus() {
return status;
}
public void setStatus(int status) {
this.status = status;
}
public String getDescription() {
return description;
}
public void setDescription(String description) {
this.description = description;
}
public List<AssociatedProfile> getProfiles() {
return profiles;
}
public void setProfiles(List<AssociatedProfile> profiles) {
this.profiles = profiles;
}
public Project getProject() {
return project;
}
public void setProject(Project project) {
this.project = project;
}
public List<Organisation> getOrganisations() {
return organisations;
}
public void setOrganisations(List<Organisation> organisations) {
this.organisations = organisations;
}
public List<Researcher> getResearchers() {
return researchers;
}
public void setResearchers(List<Researcher> researchers) {
this.researchers = researchers;
}
public List<UserInfo> getAssociatedUsers() {
return associatedUsers;
}
public void setAssociatedUsers(List<UserInfo> associatedUsers) {
this.associatedUsers = associatedUsers;
}
public UserInfo getCreator() {
return creator;
}
public void setCreator(UserInfo creator) {
this.creator = creator;
}
public Date getCreated() {
return created;
}
public void setCreated(Date created) {
this.created = created;
}
public List<Dataset> getDatasets() {
return datasets;
}
public void setDatasets(List<Dataset> datasets) {
this.datasets = datasets;
}
@Override
public void fromDataModel(DMP entity) throws InstantiationException, IllegalAccessException {
}
@Override
public DMP toDataModel() throws Exception {
DMP entity = new DMP();
entity.setId(this.id);
entity.setUsers(new HashSet<>(new DomainModelConverter<eu.eudat.entities.UserInfo, UserInfo>().toDataModel(this.associatedUsers)));
entity.setDescription(this.description);
entity.setStatus((short) this.status);
entity.setPrevious(this.previous == null ? null : new DomainModelConverter<DMP, DataManagementPlan>().toDataModel(Arrays.asList(this.previous)).get(0));
entity.setCreated(new Date());
entity.setLabel(this.label);
entity.setModified(new Date());
List<eu.eudat.entities.Dataset> datasets = new LinkedList<>();
if(this.datasets!=null){
for (Dataset dataset :this.datasets){
eu.eudat.entities.Dataset entityDataset = new eu.eudat.entities.Dataset();
entityDataset.setId(dataset.getId());
datasets.add(entityDataset);
}
entity.setDataset(new HashSet<>(datasets));
}
if (this.organisations != null && !this.organisations.isEmpty())
entity.setOrganisations(new HashSet<eu.eudat.entities.Organisation>(new DomainModelConverter<eu.eudat.entities.Organisation, Organisation>().toDataModel(this.organisations)));
if (this.researchers != null && !this.researchers.isEmpty())
entity.setResearchers(new HashSet<eu.eudat.entities.Researcher>(new DomainModelConverter<eu.eudat.entities.Researcher, Researcher>().toDataModel(this.researchers)));
if (this.project != null) entity.setProject(this.project.toDataModel());
if (this.profiles != null) {
Document associatedProfileDoc = XmlBuilder.getDocument();
Element associatedProfilesElement = associatedProfileDoc.createElement("profiles");
for (AssociatedProfile associatedProfile : this.profiles) {
associatedProfilesElement.appendChild(associatedProfile.toXml(associatedProfileDoc));
}
associatedProfileDoc.appendChild(associatedProfilesElement);
entity.setAssociatedDmps(XmlBuilder.generateXml(associatedProfileDoc));
}
return entity;
}
@Override
public String getHint() {
return null;
}
}

55
dmp-backend/src/main/java/eu/eudat/models/researcher/Researcher.java Normal file
View File

@ -0,0 +1,55 @@
package eu.eudat.models.researcher;
import eu.eudat.models.DataModel;
import org.hibernate.annotations.Type;
import javax.persistence.Column;
import java.util.Date;
import java.util.UUID;
/**
* Created by ikalyvas on 2/5/2018.
*/
public class Researcher implements DataModel<eu.eudat.entities.Researcher> {
private String firstName;
private String lastName;
public String getFirstName() {
return firstName;
}
public void setFirstName(String firstName) {
this.firstName = firstName;
}
public String getLastName() {
return lastName;
}
public void setLastName(String lastName) {
this.lastName = lastName;
}
@Override
public void fromDataModel(eu.eudat.entities.Researcher entity) throws InstantiationException, IllegalAccessException {
}
@Override
public eu.eudat.entities.Researcher toDataModel() throws Exception {
eu.eudat.entities.Researcher researcher = new eu.eudat.entities.Researcher();
researcher.setCreated(new Date());
researcher.setLabel(this.firstName+" "+this.lastName);
researcher.setModified(new Date());
researcher.setReference("dmp:"+researcher.getLabel());
researcher.setStatus((short)0);
return researcher;
}
@Override
public String getHint() {
return null;
}
}

1
dmp-backend/src/main/java/eu/eudat/models/security/Principal.java
View File

@ -1,7 +1,6 @@
package eu.eudat.models.security;
import com.fasterxml.jackson.annotation.JsonIgnore;
import eu.eudat.exceptions.UnauthorisedException;
import eu.eudat.types.Authorities;
import java.util.*;

13
dmp-backend/src/main/java/eu/eudat/queryable/QueryableList.java
View File

@ -6,9 +6,10 @@ import eu.eudat.queryable.predicates.OrderByPredicate;
import eu.eudat.queryable.predicates.SelectPredicate;
import eu.eudat.queryable.predicates.SinglePredicate;
import javax.xml.crypto.Data;
import javax.persistence.criteria.Subquery;
import java.util.List;
import java.util.Set;
import java.util.concurrent.CompletableFuture;
public interface QueryableList<T extends DataEntity<T>> {
QueryableList<T> where(SinglePredicate<T> predicate);
@ -17,10 +18,16 @@ public interface QueryableList<T extends DataEntity<T>> {
List<T> toList();
CompletableFuture<List<T>> toListAsync();
T getSingle();
CompletableFuture<T> getSingleAsync();
T getSingleOrDefault();
CompletableFuture<T> getSingleOrDefaultAsync();
QueryableList<T> skip(Integer offset);
QueryableList<T> take(Integer length);
@ -35,4 +42,8 @@ public interface QueryableList<T extends DataEntity<T>> {
Long count();
CompletableFuture<Long> countAsync();
Subquery<T> subQuery(SinglePredicate<T> predicate,List<String> fields);
}

64
dmp-backend/src/main/java/eu/eudat/queryable/hibernatequeryablelist/QueryableHibernateList.java
View File

@ -7,6 +7,8 @@ import eu.eudat.queryable.exceptions.NotSingleResultException;
import eu.eudat.queryable.predicates.OrderByPredicate;
import eu.eudat.queryable.predicates.SelectPredicate;
import eu.eudat.queryable.predicates.SinglePredicate;
import org.springframework.scheduling.annotation.Async;
import org.springframework.transaction.annotation.Transactional;
import javax.persistence.EntityManager;
import javax.persistence.TypedQuery;
@ -14,6 +16,7 @@ import javax.persistence.criteria.*;
import java.util.LinkedList;
import java.util.List;
import java.util.Set;
import java.util.concurrent.CompletableFuture;
import java.util.stream.Collectors;
public class QueryableHibernateList<T extends DataEntity<T>> implements QueryableList<T> {
@ -22,6 +25,7 @@ public class QueryableHibernateList<T extends DataEntity<T>> implements Queryabl
private CriteriaQuery<T> query;
private Class<T> tClass;
private Root<T> root;
private Subquery<T> subquery;
private List<SinglePredicate<T>> predicates = new LinkedList<>();
private List<OrderByPredicate<T>> orderings = new LinkedList<>();
private List<Selection> fields = new LinkedList<>();
@ -107,6 +111,15 @@ public class QueryableHibernateList<T extends DataEntity<T>> implements Queryabl
return this.manager.createQuery(criteriaQuery).getSingleResult();
}
public CompletableFuture<Long> countAsync() {
CriteriaBuilder criteriaBuilder = this.manager.getCriteriaBuilder();
CriteriaQuery<Long> criteriaQuery = criteriaBuilder.createQuery(Long.class);
Root<T> root = criteriaQuery.from(tClass);
criteriaQuery.select(criteriaBuilder.count(root));
criteriaQuery.where(this.generateWherePredicates(this.predicates, root));
return CompletableFuture.supplyAsync(() -> this.manager.createQuery(criteriaQuery).getSingleResult());
}
private Predicate[] generateWherePredicates(List<SinglePredicate<T>> singlePredicates, Root<T> root) {
List<Predicate> predicates = new LinkedList<>();
for (SinglePredicate<T> singlePredicate : singlePredicates) {
@ -137,32 +150,81 @@ public class QueryableHibernateList<T extends DataEntity<T>> implements Queryabl
return typedQuery.getResultList();
}
public CompletableFuture<List<T>> toListAsync() {
this.query.where(this.generateWherePredicates(this.predicates, this.root));
if (!this.orderings.isEmpty()) this.query.orderBy(this.generateOrderPredicates(this.orderings, this.root));
TypedQuery<T> typedQuery = this.manager.createQuery(this.query);
if (this.offset != null) typedQuery.setFirstResult(this.offset);
if (this.length != null) typedQuery.setMaxResults(this.length);
if (this.hint != null && this.hints.contains(hint)) {
List ids = typedQuery.getResultList().stream().map(item -> item.getKeys()[0]).collect(Collectors.toList());
if (ids != null && !ids.isEmpty()) typedQuery = queryWithHint(ids);
}
TypedQuery<T> finalQuery = typedQuery;
return CompletableFuture.supplyAsync(() -> finalQuery.getResultList());
}
public T getSingle() {
this.query.where(this.generateWherePredicates(this.predicates, this.root));
TypedQuery<T> typedQuery = this.manager.createQuery(this.query);
if (this.hint != null)
typedQuery.setHint("javax.persistence.fetchgraph", this.manager.getEntityGraph(this.hint));
return typedQuery.getSingleResult();
}
public CompletableFuture<T> getSingleAsync() {
this.query.where(this.generateWherePredicates(this.predicates, this.root));
TypedQuery<T> typedQuery = this.manager.createQuery(this.query);
if (this.hint != null)
typedQuery.setHint("javax.persistence.fetchgraph", this.manager.getEntityGraph(this.hint));
return CompletableFuture.supplyAsync(() -> typedQuery.getSingleResult());
}
public T getSingleOrDefault() {
this.query.where(this.generateWherePredicates(this.predicates, this.root));
TypedQuery<T> typedQuery = this.manager.createQuery(this.query);
if (this.hint != null)
typedQuery.setHint("javax.persistence.fetchgraph", this.manager.getEntityGraph(this.hint));
List<T> results = typedQuery.getResultList();
if (results.size() == 0) return null;
if (results.size() == 1) return results.get(0);
else throw new NotSingleResultException("Query returned more than one items");
}
public CompletableFuture<T> getSingleOrDefaultAsync() {
this.query.where(this.generateWherePredicates(this.predicates, this.root));
TypedQuery<T> typedQuery = this.manager.createQuery(this.query);
if (this.hint != null)
typedQuery.setHint("javax.persistence.fetchgraph", this.manager.getEntityGraph(this.hint));
return CompletableFuture.supplyAsync(() -> typedQuery.getResultList()).thenApply(list -> {
if (list.size() == 0) return null;
if (list.size() == 1) return list.get(0);
else throw new NotSingleResultException("Query returned more than one items");
});
}
private TypedQuery<T> queryWithHint(List ids) {
CriteriaBuilder criteriaBuilder = this.manager.getCriteriaBuilder();
CriteriaQuery<T> criteriaQuery = criteriaBuilder.createQuery(tClass);
Root<T> criteriaRoot = criteriaQuery.from(this.tClass);
criteriaQuery.where(criteriaRoot.get("id").in(ids));
if (!this.orderings.isEmpty()) criteriaQuery.orderBy(this.generateOrderPredicates(this.orderings, criteriaRoot));
if (!this.orderings.isEmpty())
criteriaQuery.orderBy(this.generateOrderPredicates(this.orderings, criteriaRoot));
TypedQuery<T> typedQuery = this.manager.createQuery(criteriaQuery);
typedQuery.setHint("javax.persistence.fetchgraph", this.manager.getEntityGraph(this.hint));
return typedQuery;
}
@Override
public Subquery<T> subQuery(SinglePredicate<T> predicate, List<String> fields) {
Subquery<T> subquery = this.manager.getCriteriaBuilder().createQuery().subquery(this.tClass);
Root<T> root = subquery.from(this.tClass);
subquery.where(predicate.applyPredicate(this.manager.getCriteriaBuilder(), root));
subquery.select(root.get(fields.get(0)));
return subquery;
}
}

7
dmp-backend/src/main/java/eu/eudat/security/CustomAuthenticationProvider.java
View File

@ -3,17 +3,14 @@ package eu.eudat.security;
import java.io.IOException;
import java.security.GeneralSecurityException;
import eu.eudat.exceptions.UnauthorisedException;
import eu.eudat.exceptions.security.UnauthorisedException;
import eu.eudat.models.login.LoginInfo;
import eu.eudat.models.security.Principal;
import eu.eudat.security.validators.TokenValidatorFactory;
import eu.eudat.security.validators.TokenValidatorFactoryImpl;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.stereotype.Component;
import eu.eudat.dao.entities.UserInfoDao;
import eu.eudat.exceptions.NonValidTokenException;
import eu.eudat.security.validators.google.GoogleTokenValidator;
import eu.eudat.exceptions.security.NonValidTokenException;
@Component
public class CustomAuthenticationProvider {

3
dmp-backend/src/main/java/eu/eudat/security/validators/TokenValidator.java
View File

@ -1,7 +1,6 @@
package eu.eudat.security.validators;
import eu.eudat.entities.UserInfo;
import eu.eudat.exceptions.NonValidTokenException;
import eu.eudat.exceptions.security.NonValidTokenException;
import eu.eudat.models.login.LoginInfo;
import eu.eudat.models.security.Principal;

17
dmp-backend/src/main/java/eu/eudat/security/validators/facebook/FacebookTokenValidator.java
View File

@ -1,14 +1,7 @@
package eu.eudat.security.validators.facebook;
import eu.eudat.dao.entities.UserInfoDao;
import eu.eudat.dao.entities.security.CredentialDao;
import eu.eudat.dao.entities.security.UserTokenDao;
import eu.eudat.entities.Credential;
import eu.eudat.entities.UserInfo;
import eu.eudat.entities.UserToken;
import eu.eudat.exceptions.NonValidTokenException;
import eu.eudat.exceptions.UnauthorisedException;
import eu.eudat.models.criteria.UserInfoCriteria;
import eu.eudat.exceptions.security.NonValidTokenException;
import eu.eudat.exceptions.security.UnauthorisedException;
import eu.eudat.models.login.LoginInfo;
import eu.eudat.models.loginprovider.LoginProviderUser;
import eu.eudat.models.security.Principal;
@ -18,14 +11,8 @@ import eu.eudat.services.ApiContext;
import eu.eudat.services.AuthenticationService;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.core.env.Environment;
import org.springframework.social.connect.Connection;
import org.springframework.social.connect.ConnectionKey;
import org.springframework.social.facebook.api.Facebook;
import org.springframework.social.facebook.api.User;
import org.springframework.social.facebook.connect.FacebookConnectionFactory;
import org.springframework.social.facebook.connect.FacebookServiceProvider;
import org.springframework.social.oauth2.AccessGrant;
import org.springframework.social.oauth2.OAuth2Operations;
import org.springframework.stereotype.Component;
import java.io.IOException;

16
dmp-backend/src/main/java/eu/eudat/security/validators/google/GoogleTokenValidator.java
View File

@ -1,19 +1,10 @@
package eu.eudat.security.validators.google;
import java.io.FileReader;
import java.io.IOException;
import java.security.GeneralSecurityException;
import java.security.Principal;
import java.util.*;
import java.util.stream.Collector;
import java.util.stream.Collectors;
import com.google.api.client.googleapis.auth.oauth2.*;
import eu.eudat.dao.entities.security.CredentialDao;
import eu.eudat.dao.entities.security.UserTokenDao;
import eu.eudat.entities.Credential;
import eu.eudat.entities.UserToken;
import eu.eudat.models.criteria.UserInfoCriteria;
import eu.eudat.models.login.LoginInfo;
import eu.eudat.models.loginprovider.LoginProviderUser;
import eu.eudat.security.validators.TokenValidator;
@ -27,14 +18,9 @@ import com.google.api.client.http.HttpTransport;
import com.google.api.client.http.javanet.NetHttpTransport;
import com.google.api.client.json.jackson2.JacksonFactory;
import eu.eudat.dao.entities.UserInfoDao;
import eu.eudat.entities.UserInfo;
import eu.eudat.exceptions.NonValidTokenException;
import eu.eudat.exceptions.security.NonValidTokenException;
import org.springframework.core.env.Environment;
import org.springframework.stereotype.Component;
import org.springframework.stereotype.Service;
import static com.sun.org.apache.xalan.internal.xsltc.compiler.Constants.REDIRECT_URI;
@Component("googleTokenValidator")
public class GoogleTokenValidator implements TokenValidator {

5
dmp-backend/src/main/java/eu/eudat/security/validators/linkedin/LinkedInTokenValidator.java
View File

@ -1,7 +1,7 @@
package eu.eudat.security.validators.linkedin;
import eu.eudat.exceptions.NonValidTokenException;
import eu.eudat.exceptions.UnauthorisedException;
import eu.eudat.exceptions.security.NonValidTokenException;
import eu.eudat.exceptions.security.UnauthorisedException;
import eu.eudat.models.login.LoginInfo;
import eu.eudat.models.loginprovider.LoginProviderUser;
import eu.eudat.models.security.Principal;
@ -11,7 +11,6 @@ import eu.eudat.services.ApiContext;
import eu.eudat.services.AuthenticationService;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.core.env.Environment;
import org.springframework.social.facebook.connect.FacebookServiceProvider;
import org.springframework.social.linkedin.api.LinkedIn;
import org.springframework.social.linkedin.api.LinkedInProfile;
import org.springframework.social.linkedin.connect.LinkedInServiceProvider;

8
dmp-backend/src/main/java/eu/eudat/security/validators/twitter/TwitterTokenValidator.java
View File

@ -1,7 +1,7 @@
package eu.eudat.security.validators.twitter;
import eu.eudat.exceptions.NonValidTokenException;
import eu.eudat.exceptions.UnauthorisedException;
import eu.eudat.exceptions.security.NonValidTokenException;
import eu.eudat.exceptions.security.UnauthorisedException;
import eu.eudat.models.login.LoginInfo;
import eu.eudat.models.loginprovider.LoginProviderUser;
import eu.eudat.models.security.Principal;
@ -11,12 +11,8 @@ import eu.eudat.services.ApiContext;
import eu.eudat.services.AuthenticationService;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.core.env.Environment;
import org.springframework.social.linkedin.api.LinkedIn;
import org.springframework.social.linkedin.api.LinkedInProfile;
import org.springframework.social.linkedin.connect.LinkedInServiceProvider;
import org.springframework.social.oauth1.AuthorizedRequestToken;
import org.springframework.social.oauth1.OAuthToken;
import org.springframework.social.oauth2.AccessGrant;
import org.springframework.social.twitter.api.TwitterProfile;
import org.springframework.social.twitter.api.impl.TwitterTemplate;
import org.springframework.social.twitter.connect.TwitterServiceProvider;

3
dmp-backend/src/main/java/eu/eudat/services/AuthenticationService.java
View File

@ -19,6 +19,7 @@ import org.springframework.transaction.annotation.Transactional;
import javax.xml.ws.ServiceMode;
import java.util.*;
import java.util.stream.Collectors;
@Service("authenticationService ")
@ -56,7 +57,7 @@ public class AuthenticationService {
principal.setExpiresAt(token.getExpiresAt());
principal.setName(user.getName());
List<UserRole> userRoles = this.apiContext.getDatabaseRepository().getUserRoleDao().getUserRoles(user);
List<UserRole> userRoles = user.getUserRoles().stream().collect(Collectors.toList());
for (UserRole item : userRoles) {
if (principal.getAuthz() == null) principal.setAuthorities(new HashSet<>());
principal.getAuthz().add(Authorities.fromInteger(item.getRole()));

8
dmp-backend/src/main/java/eu/eudat/utilities/Cloneable.java Normal file
View File

@ -0,0 +1,8 @@
package eu.eudat.utilities;
/**
* Created by ikalyvas on 2/5/2018.
*/
public interface Cloneable<T> {
T clone();
}

13
dmp-backend/src/main/java/eu/eudat/utilities/builders/DomainModelConverter.java
View File

@ -18,11 +18,18 @@ public class DomainModelConverter<T extends DataEntity,U extends DataModel<T>> {
return entities;
}
public List<U> fromDataModel(List<T> entities,Class<U> clazz) throws IllegalAccessException, InstantiationException {
public List<U> fromDataModel(List<T> entities,Class<U> clazz) {
List<U> models = new LinkedList<>();
for(T entity:entities){
U model = clazz.newInstance();
model.fromDataModel(entity);
U model = null;
try {
model = clazz.newInstance();
model.fromDataModel(entity);
} catch (InstantiationException e) {
e.printStackTrace();
} catch (IllegalAccessException e) {
e.printStackTrace();
}
models.add(model);
}
return models;

2
dmp-frontend/src/app/app.constants.ts
View File

@ -1,5 +1,5 @@
export const HostConfiguration = {
Server: 'http://192.168.32.67:8080/', //'http://dl043.madgik.di.uoa.gr:8080/'
Server: 'http://192.168.32.64:8080/', //'http://dl043.madgik.di.uoa.gr:8080/'
App: 'localhost:4200/' // 'http://dl043.madgik.di.uoa.gr:8080/'
//CASHost: 'https://login-devel.uoa.gr/login',
//Service: 'http://elkefinman/login'

10
dmp-frontend/src/app/dmps/dmps.module.ts
View File

@ -1,3 +1,6 @@
import { DatasetWizardListingComponent } from './wizard/listing/dataset-wizard-listing.component';
import { DataManagementPlanWizardEditorComponent } from './wizard/editor/dmp-wizard-editor.component';
import { DataManagementPlanWizardComponent } from './wizard/dmp-wizard.component';
import { TranslateHttpLoader } from '@ngx-translate/http-loader';
import { BaseHttpService } from '../utilities/cite-http-service-module/base-http.service';
import { InvitationAcceptedComponent } from '../invitation-accepted/invitation-accepted.component';
@ -35,6 +38,9 @@ import { NgModule } from '@angular/core';
DataManagementPlanEditorComponent,
InvitationComponent,
InvitationAcceptedComponent,
DataManagementPlanWizardComponent,
DataManagementPlanWizardEditorComponent,
DatasetWizardListingComponent
],
exports: [
@ -42,7 +48,9 @@ import { NgModule } from '@angular/core';
DataManagementPlanEditorComponent,
InvitationComponent,
InvitationAcceptedComponent,
DataManagementPlanWizardComponent,
DataManagementPlanWizardEditorComponent,
DatasetWizardListingComponent
],
entryComponents: [
InvitationComponent

3
dmp-frontend/src/app/dmps/dmps.routes.ts
View File

@ -1,3 +1,4 @@
import { DataManagementPlanWizardComponent } from './wizard/dmp-wizard.component';
import { DataManagementPlanEditorComponent } from './editor/dmp-editor.component';
import { DataManagementPlanListingComponent } from './listing/dmp-listing.component';
import { DatasetListingComponent } from '../datasets/listing/dataset-listing.component';
@ -7,7 +8,7 @@ const routes: Routes = [
{ path: '', component: DataManagementPlanListingComponent },
{ path: 'edit/:id', component: DataManagementPlanEditorComponent },
{ path: 'new', component: DataManagementPlanEditorComponent },
{ path: 'new_version/:id', component: DataManagementPlanEditorComponent, data: { clone: "clone" } },
{ path: 'new_version/:id', component: DataManagementPlanWizardComponent, data: { clone: "clone" } },
];
export const DataManagementPlanRoutes = RouterModule.forChild(routes);

29
dmp-frontend/src/app/dmps/editor/dmp-editor.component.ts
View File

@ -86,10 +86,10 @@ export class DataManagementPlanEditorComponent implements AfterViewInit {
});
// let clone = this.route.snapshot.data.clone; ginetai kai esti ikalyvas
this.route
.queryParams
.subscribe(params => {
this.createNewVersion = params["clone"];
});
.queryParams
.subscribe(params => {
this.createNewVersion = params["clone"];
});
}
formSubmit(): void {
@ -102,19 +102,12 @@ export class DataManagementPlanEditorComponent implements AfterViewInit {
return this.formGroup.valid;
}
onSubmit(): void {debugger;
if(this.createNewVersion =="true"){
this.formGroup.value.id = null;
this.dataManagementPlanService.createDataManagementPlanClone(this.formGroup.value, this.formGroup.get("id").value).subscribe(
complete => this.onCallbackSuccess(),
error => this.onCallbackError(error)
);
}
else
this.dataManagementPlanService.createDataManagementPlan(this.formGroup.value).subscribe(
complete => this.onCallbackSuccess(),
error => this.onCallbackError(error)
);
onSubmit(): void {
debugger;
this.dataManagementPlanService.createDataManagementPlan(this.formGroup.value).subscribe(
complete => this.onCallbackSuccess(),
error => this.onCallbackError(error)
)
}
onCallbackSuccess(): void {
@ -142,7 +135,7 @@ export class DataManagementPlanEditorComponent implements AfterViewInit {
}
public invite(): void {
this.router.navigate(['/invite/'+this.dataManagementPlan.id]);
this.router.navigate(['/invite/' + this.dataManagementPlan.id]);
}
filterOrganisations(value: string): void {

2
dmp-frontend/src/app/dmps/listing/dmp-listing.component.ts
View File

@ -64,7 +64,7 @@ export class DataManagementPlanListingComponent implements OnInit {
}
newVersion(rowId: String) {
this.router.navigate(['/dmps/new_version/' + rowId], { queryParams: { clone: 'true' } });
this.router.navigate(['/dmps/new_version/' + rowId]);
}
getDefaultCriteria(): DataManagementPlanCriteria {

19
dmp-frontend/src/app/dmps/wizard/dmp-wizard.component.html Normal file
View File

@ -0,0 +1,19 @@
<div class="dmp-wizard">
<mat-horizontal-stepper [linear]="isLinear" #stepper>
<mat-step>
<ng-template matStepLabel>{{'DMP-WIZARD.FIRST-STEP.TITLE' | translate}}</ng-template>
<app-dmp-wizard-editor-component [formGroup]="formGroup" *ngIf="formGroup"></app-dmp-wizard-editor-component>
<div class="navigation-buttons-container">
<button style="float:right;" matStepperNext mat-raised-button color="primary">{{'DATASET-WIZARD.ACTIONS.NEXT' | translate}}</button>
</div>
</mat-step>
<mat-step>
<ng-template matStepLabel>{{'DMP-WIZARD.FIRST-STEP.TITLE' | translate}}</ng-template>
<app-dataset-wizard-listing-component [formGroup]="formGroup" [dmpId]="formGroup.get('id').value" *ngIf="formGroup"></app-dataset-wizard-listing-component>
<div class="navigation-buttons-container">
<button matStepperPrevious mat-raised-button color="primary">{{'DATASET-WIZARD.ACTIONS.BACK' | translate}}</button>
<button style="float:right;" matStepperNext mat-raised-button (click)='submit()' color="primary">{{'DATASET-WIZARD.ACTIONS.SAVE' | translate}}</button>
</div>
</mat-step>
</mat-horizontal-stepper>
</div>

46
dmp-frontend/src/app/dmps/wizard/dmp-wizard.component.scss Normal file
View File

@ -0,0 +1,46 @@
.full-width {
width: 100%;
}
.input-table {
table-layout: fixed;
}
.table-card .mat-grid-tile {
background: rgba(0, 0, 0, 0.32);
}
.dmp-wizard {
.full-width {
width: 100%;
}
mat-form-field {
width: 100%;
padding: 3px;
}
td-chips {
margin-top: 20px;
}
.navigation-buttons-container {
margin-top: 20px;
}
.mat-card {
margin: 16px 0;
}
p {
margin: 16px;
}
.left-button {
float: left;
}
.description-area {
height: 100px;
}
}

70
dmp-frontend/src/app/dmps/wizard/dmp-wizard.component.ts Normal file
View File

@ -0,0 +1,70 @@
import { BaseErrorModel } from '../../models/error/BaseErrorModel';
import { SnackBarNotificationComponent } from '../../shared/components/notificaiton/snack-bar-notification.component';
import { JsonSerializer } from '../../utilities/JsonSerializer';
import { DataManagementPlanModel } from '../../models/data-managemnt-plans/DataManagementPlanModel';
import { DataManagementPlanService } from '../../services/data-management-plan/data-management-plan.service';
import { Component, OnInit } from '@angular/core';
import { ActivatedRoute, Params, Router } from '@angular/router';
import { FormGroup } from '@angular/forms';
import { MatSnackBar } from '@angular/material';
import { TranslateService } from '@ngx-translate/core';
@Component({
selector: 'app-dmp-wizard-component',
templateUrl: 'dmp-wizard.component.html',
styleUrls: ['./dmp-wizard.component.scss'],
providers: [DataManagementPlanService]
})
export class DataManagementPlanWizardComponent implements OnInit {
constructor(
private dataManagementPlanService: DataManagementPlanService,
private language: TranslateService,
public snackBar: MatSnackBar,
public route: ActivatedRoute,
private router: Router
) { }
itemId: string
dataManagementPlan: DataManagementPlanModel;
formGroup: FormGroup
ngOnInit(): void {
this.route.params.subscribe((params: Params) => {
this.itemId = params['id'];
this.dataManagementPlanService.getSingle(this.itemId).map(data => data as DataManagementPlanModel)
.subscribe(data => {
this.dataManagementPlan = JsonSerializer.fromJSONObject(data, DataManagementPlanModel);
this.formGroup = this.dataManagementPlan.buildForm();
});
})
}
submit() {
debugger;
this.dataManagementPlanService.newVersion(this.formGroup.value, this.itemId).subscribe(
complete => this.onCallbackSuccess(),
error => this.onCallbackError(error)
);
}
onCallbackSuccess(): void {
this.snackBar.openFromComponent(SnackBarNotificationComponent, {
data: { message: 'GENERAL.SNACK-BAR.SUCCESSFUL-UPDATE', language: this.language },
duration: 3000,
extraClasses: ['snackbar-success']
})
this.router.navigate(['/dmps']);
}
onCallbackError(error: any) {
this.setErrorModel(error.error);
//this.validateAllFormFields(this.formGroup);
}
public setErrorModel(errorModel: BaseErrorModel) {
Object.keys(errorModel).forEach(item => {
// (<any>this.dataManagementPlan.errorModel)[item] = (<any>errorModel)[item];
})
}
}

77
dmp-frontend/src/app/dmps/wizard/editor/dmp-wizard-editor.component.html Normal file
View File

@ -0,0 +1,77 @@
<div class="data-management-plan-wizard-editor">
<form *ngIf="formGroup" (ngSubmit)="formSubmit()" [formGroup]="formGroup">
<mat-card>
<mat-card-content>
<mat-form-field class="full-width">
<input matInput placeholder="{{'DMP-EDITOR.FIELDS.NAME' | translate}}" type="text" name="label" formControlName="label" required>
<mat-error *ngIf="formGroup.get('label').errors?.backendError">{{baseErrorModel.label}}</mat-error>
<mat-error *ngIf="formGroup.get('label').errors?.required">{{'GENERAL.VALIDATION.REQUIRED' | translate}}</mat-error>
</mat-form-field>
<mat-form-field class="full-width">
<textarea matInput class="description-area" placeholder="{{'DMP-EDITOR.FIELDS.DESCRIPTION' | translate}}" formControlName="description"
required></textarea>
<mat-error *ngIf="formGroup.get('description').errors?.backendError">{{errorModel.description}}</mat-error>
<mat-error *ngIf="formGroup.get('description').errors?.required">{{'GENERAL.VALIDATION.REQUIRED' | translate}}</mat-error>
</mat-form-field>
<auto-complete class="mat-form-field-full-width" placeholder="{{'DMP-EDITOR.FIELDS.PROJECT' | translate}}" [configuration]="projectAutoCompleteConfiguration"
titleKey="label" [control]="formGroup.get('project')" [required]="true">
</auto-complete>
<td-chips color="accent" [items]="filteredProfiles" formControlName="profiles" placeholder="{{'DMP-EDITOR.FIELDS.PROFILES' | translate}}"
(inputChange)="filterProfiles($event)" requireMatch>
<ng-template td-chip let-chip="chip">
<div class="tc-grey-100 bgc-teal-700" td-chip-avatar>{{chip.label.substring(0, 1).toUpperCase()}}</div>
{{chip.label}}
</ng-template>
<ng-template td-autocomplete-option let-option="option">
<div layout="row" layout-align="start center">
{{option.label}}
</div>
</ng-template>
<mat-progress-bar [style.height.px]="2" *ngIf="filteredProfilesAsync" mode="indeterminate"></mat-progress-bar>
<mat-error style="font-size:10.5px" *ngIf="formGroup.get('profiles').errors?.required">{{'GENERAL.VALIDATION.REQUIRED' | translate}}</mat-error>
</td-chips>
<td-chips color="accent" [items]="filteredOrganisations" formControlName="organisations" placeholder="{{'DMP-EDITOR.FIELDS.ORGANISATIONS' | translate}}"
(inputChange)="filterOrganisations($event)" requireMatch>
<ng-template td-chip let-chip="chip">
<div class="tc-grey-100 bgc-teal-700" td-chip-avatar>{{chip.name.substring(0, 1).toUpperCase()}}</div>
{{chip.name}}
</ng-template>
<ng-template td-autocomplete-option let-option="option">
<div layout="row" layout-align="start center">
{{option.name}}
</div>
</ng-template>
<mat-progress-bar [style.height.px]="2" *ngIf="filteringOrganisationsAsync" mode="indeterminate"></mat-progress-bar>
</td-chips>
<td-chips style="margin-bottom:25px;" color="accent" [items]="filteredResearchers" formControlName="researchers" placeholder="{{'DMP-EDITOR.FIELDS.RESEARCHERS' | translate}}"
(inputChange)="filterResearchers($event)" requireMatch>
<ng-template td-chip let-chip="chip">
<div class="tc-grey-100 bgc-teal-700" td-chip-avatar>{{chip.name.substring(0, 1).toUpperCase()}}</div>
{{chip.name}}
</ng-template>
<ng-template td-autocomplete-option let-option="option">
<div layout="row" layout-align="start center">
{{option.name}}
</div>
</ng-template>
<mat-progress-bar [style.height.px]="2" *ngIf="filteringResearchersAsync" mode="indeterminate"></mat-progress-bar>
</td-chips>
<mat-list *ngIf="associatedUsers?.length" role="list">
<h3 mat-subheader>Associated Users</h3>
<mat-list-item role="listitem" *ngFor="let user of associatedUsers">
<mat-icon mat-list-icon>person</mat-icon>
<div>{{user.name}}</div>
</mat-list-item>
</mat-list>
</mat-card-content>
</mat-card>
</form>
<!-- <div *ngIf="formGroup"> {{ formGroup.value | json }}</div> -->
</div>

39
dmp-frontend/src/app/dmps/wizard/editor/dmp-wizard-editor.component.scss Normal file
View File

@ -0,0 +1,39 @@
.full-width {
width: 100%;
}
.input-table {
table-layout: fixed;
}
.table-card .mat-grid-tile {
background: rgba(0, 0, 0, 0.32);
}
.data-management-plan-wizard-editor {
.mat-form-field-full-width{
mat-form-field {
width: 100%;
padding: 3px;
}
}
.mat-card {
margin: 16px 0;
}
p {
margin: 16px;
}
.left-button {
float: left;
}
.description-area {
height: 100px;
}
}

174
dmp-frontend/src/app/dmps/wizard/editor/dmp-wizard-editor.component.ts Normal file
View File

@ -0,0 +1,174 @@
import { DatasetProfileModel } from '../../../models/datasets/DatasetProfileModel';
import { DatasetProfileCriteria } from '../../../models/criteria/dataset/DatasetProfileCriteria';
import { BaseErrorModel } from '../../../models/error/BaseErrorModel';
import { SnackBarNotificationComponent } from '../../../shared/components/notificaiton/snack-bar-notification.component';
import { JsonSerializer } from '../../../utilities/JsonSerializer';
import { RequestItem } from '../../../models/criteria/RequestItem';
import { ProjectCriteria } from '../../../models/criteria/project/ProjectCriteria';
import { DmpUsersModel } from '../../../models/dmpUsers/DmpUsersModel';
import { AutoCompleteConfiguration } from '../../../shared/components/autocomplete/AutoCompleteConfiguration';
import { ExternalSourcesItemModel } from '../../../models/external-sources/ExternalSourcesItemModel';
import { DataManagementPlanModel } from '../../../models/data-managemnt-plans/DataManagementPlanModel';
import { ProjectService } from '../../../services/project/project.service';
import { ExternalSourcesService } from '../../../services/external-sources/external-sources.service';
import { DataManagementPlanService } from '../../../services/data-management-plan/data-management-plan.service';
import { Component, ViewChild, OnInit, AfterViewInit, ViewEncapsulation, Input } from "@angular/core";
import { MatPaginator, MatSort, MatSnackBar } from "@angular/material";
import { Router, ActivatedRoute, Params } from "@angular/router";
import { TranslateService } from "@ngx-translate/core";
import { DataSource } from "@angular/cdk/table";
import { Observable } from "rxjs/Observable";
import { FormGroup } from '@angular/forms';
@Component({
selector: 'app-dmp-wizard-editor-component',
templateUrl: 'dmp-wizard-editor.component.html',
styleUrls: ['./dmp-wizard-editor.component.scss'],
providers: [DataManagementPlanService, ExternalSourcesService, ProjectService],
encapsulation: ViewEncapsulation.None
})
export class DataManagementPlanWizardEditorComponent implements AfterViewInit {
isNew = true;
@Input() formGroup: FormGroup = null;
filteringOrganisationsAsync: boolean = false;
filteringResearchersAsync: boolean = false;
filteredProfilesAsync: boolean = false;
filteredOrganisations: ExternalSourcesItemModel[];
filteredResearchers: ExternalSourcesItemModel[];
filteredProfiles: DatasetProfileModel[];
projectAutoCompleteConfiguration: AutoCompleteConfiguration;
createNewVersion;
associatedUsers: Array<DmpUsersModel>
constructor(
private dataManagementPlanService: DataManagementPlanService,
private projectService: ProjectService,
private externalSourcesService: ExternalSourcesService,
private route: ActivatedRoute,
public snackBar: MatSnackBar,
public router: Router,
public language: TranslateService,
private _service: DataManagementPlanService
) {
}
ngAfterViewInit() {
let projectRequestItem: RequestItem<ProjectCriteria> = new RequestItem();
projectRequestItem.criteria = new ProjectCriteria();
this.projectAutoCompleteConfiguration = new AutoCompleteConfiguration(this.projectService.getWithExternal.bind(this.projectService), projectRequestItem);
}
formSubmit(): void {
//this.touchAllFormFields(this.formGroup);
if (!this.isFormValid()) { return; }
this.onSubmit();
}
public isFormValid() {
return this.formGroup.valid;
}
onSubmit(): void {
debugger;
this.dataManagementPlanService.createDataManagementPlan(this.formGroup.value).subscribe(
complete => this.onCallbackSuccess(),
error => this.onCallbackError(error)
);
}
onCallbackSuccess(): void {
this.snackBar.openFromComponent(SnackBarNotificationComponent, {
data: { message: this.isNew ? 'GENERAL.SNACK-BAR.SUCCESSFUL-CREATION' : 'GENERAL.SNACK-BAR.SUCCESSFUL-UPDATE', language: this.language },
duration: 3000,
extraClasses: ['snackbar-success']
})
this.router.navigate(['/dmps']);
}
onCallbackError(error: any) {
this.setErrorModel(error.error);
//this.validateAllFormFields(this.formGroup);
}
public setErrorModel(errorModel: BaseErrorModel) {
Object.keys(errorModel).forEach(item => {
// (<any>this.dataManagementPlan.errorModel)[item] = (<any>errorModel)[item];
})
}
public cancel(): void {
this.router.navigate(['/dmps']);
}
filterOrganisations(value: string): void {
this.filteredOrganisations = undefined;
if (value) {
this.filteringOrganisationsAsync = true;
this.externalSourcesService.searchDMPOrganizations(value).subscribe(items => {
this.filteredOrganisations = items;
this.filteringOrganisationsAsync = false;
// this.filteredOrganisations = items.filter((filteredObj: any) => {
// return this.objectsModel ? this.objectsModel.indexOf(filteredObj) < 0 : true;
// });
});
}
}
filterResearchers(value: string): void {
this.filteredResearchers = undefined;
if (value) {
this.filteringResearchersAsync = true;
this.externalSourcesService.searchDMPResearchers(value).subscribe(items => {
this.filteredResearchers = items;
this.filteringResearchersAsync = false;
// this.filteredOrganisations = items.filter((filteredObj: any) => {
// return this.objectsModel ? this.objectsModel.indexOf(filteredObj) < 0 : true;
// });
});
}
}
filterProfiles(value: string): void {
this.filteredProfiles = undefined;
if (value) {
this.filteredProfilesAsync = true;
// this.externalSourcesService.searchDMPProfiles(value).subscribe(items => {
// this.filteredProfiles = items;
// this.filteredProfilesAsync = false;
// // this.filteredOrganisations = items.filter((filteredObj: any) => {
// // return this.objectsModel ? this.objectsModel.indexOf(filteredObj) < 0 : true;
// // });
// });
const request = new RequestItem<DatasetProfileCriteria>();
let criteria = new DatasetProfileCriteria();
criteria.like = value;
request.criteria = criteria;
this._service.searchDMPProfiles(request).subscribe(items => {
this.filteredProfiles = items;
this.filteredProfilesAsync = false;
});
}
}
}

10
dmp-frontend/src/app/dmps/wizard/listing/dataset-wizard-listing.component.html Normal file
View File

@ -0,0 +1,10 @@
<div class="container-fluid">
<h3>{{titlePrefix}} {{'DATASET-LISTING.TITLE' | translate}}</h3>
<mat-card class="mat-card">
<mat-selection-list #selectedItems (selectionChange)="selectionChanged($event,selectedItems)">
<mat-list-option *ngFor="let dataset of datasets;" [value]="dataset.id" >
{{dataset.label}}
</mat-list-option>
</mat-selection-list>
</mat-card>
</div>

35
dmp-frontend/src/app/dmps/wizard/listing/dataset-wizard-listing.component.scss Normal file
View File

@ -0,0 +1,35 @@
.mat-table {
margin: 24px;
}
.mat-fab-bottom-right {
top: auto !important;
right: 20px !important;
bottom: 10px !important;
left: auto !important;
position: fixed !important;
}
.full-width {
width: 100%;
}
.mat-card {
margin: 16px 0;
}
.mat-row {
cursor: pointer;
}
mat-row:hover {
background-color: lightgray;
}
// mat-row:nth-child(even){
// background-color:red;
// }
mat-row:nth-child(odd){
background-color:#eef0fb;
}

84
dmp-frontend/src/app/dmps/wizard/listing/dataset-wizard-listing.component.ts Normal file
View File

@ -0,0 +1,84 @@
import { DataTableData } from '../../../models/data-table/DataTableData';
import { JsonSerializer } from '../../../utilities/JsonSerializer';
import { DataTableRequest } from '../../../models/data-table/DataTableRequest';
import { DatasetListingModel } from '../../../models/datasets/DatasetListingModel';
import { DatasetCriteria } from '../../../models/criteria/dataset/DatasetCriteria';
import { DataManagementPlanModel } from '../../../models/data-managemnt-plans/DataManagementPlanModel';
import { DatasetCriteriaComponent } from '../../../shared/components/criteria/datasets/datasets-criteria.component';
import { DataManagementPlanService } from '../../../services/data-management-plan/data-management-plan.service';
import { DatasetService } from '../../../services/dataset/dataset.service';
import { Component, ViewChild, OnInit, AfterViewInit, Input } from "@angular/core";
import { MatPaginator, MatSort, MatSnackBar } from "@angular/material";
import { Router, Params, ActivatedRoute } from "@angular/router";
import { TranslateService } from "@ngx-translate/core";
import { DataSource } from "@angular/cdk/table";
import { FormGroup, FormBuilder, FormControl, FormArray } from "@angular/forms"
import { Observable } from "rxjs/Observable";
import { PageEvent } from '@angular/material';
import { SelectionModel } from '@angular/cdk/collections';
@Component({
selector: 'app-dataset-wizard-listing-component',
templateUrl: 'dataset-wizard-listing.component.html',
styleUrls: ['./dataset-wizard-listing.component.scss'],
providers: [DatasetService, DataManagementPlanService]
})
export class DatasetWizardListingComponent implements OnInit {
@ViewChild(MatPaginator) _paginator: MatPaginator;
@ViewChild(MatSort) sort: MatSort;
@ViewChild(DatasetCriteriaComponent) criteria: DatasetCriteriaComponent;
titlePrefix: String;
datasets: DatasetListingModel[] = []
@Input() dmpId: String;
@Input() formGroup: FormGroup
selection = new SelectionModel<Element>(true, []);
statuses = [
{ value: '0', viewValue: 'Active' },
{ value: '1', viewValue: 'Inactive' }
];
constructor(
private datasetService: DatasetService,
private router: Router,
private languageService: TranslateService,
public snackBar: MatSnackBar,
public route: ActivatedRoute,
public dataManagementPlanService: DataManagementPlanService
) {
}
ngOnInit() {
if (this.dmpId != null) this.setDmpTitle(this.dmpId);
let request: DataTableRequest<DatasetCriteria> = new DataTableRequest<DatasetCriteria>(null, null, null);
request.criteria = new DatasetCriteria();
request.criteria.dmpIds = [this.dmpId];
this.datasetService.getPaged(request).subscribe(items => {
this.datasets = JsonSerializer.fromJSONArray(items.data, DatasetListingModel)
})
this.formGroup.addControl("datasets", new FormBuilder().array(new Array<FormControl>()))
}
setDmpTitle(dmpId: String) {
this.dataManagementPlanService.getSingle(dmpId).map(data => data as DataManagementPlanModel)
.subscribe(data => {
this.titlePrefix = data.label;
});
}
selectionChanged(event,selectedItems) {
this.formGroup.removeControl("datasets");
this.formGroup.addControl("datasets", new FormBuilder().array(new Array<FormControl>()))
selectedItems.selectedOptions.selected.forEach(element => {
(<FormArray>this.formGroup.get("datasets")).push(new FormBuilder().group({ id: element.value }))
});
}
}

4
dmp-frontend/src/app/services/data-management-plan/data-management-plan.service.ts
View File

@ -49,7 +49,7 @@ export class DataManagementPlanService {
return this.http.post<DatasetProfileModel[]>(this.actionUrl + "datasetprofiles/get", dataSetProfileRequest, { headers: this.headers });
}
createDataManagementPlanClone(dataManagementPlanModel: DataManagementPlanModel, id:String): Observable<DataManagementPlanModel> {
return this.http.post<DataManagementPlanModel>(this.actionUrl + 'clone/' + id , dataManagementPlanModel, { headers: this.headers });
newVersion(dataManagementPlanModel: DataManagementPlanModel, id:String): Observable<DataManagementPlanModel> {
return this.http.post<DataManagementPlanModel>(this.actionUrl + 'new/' + id , dataManagementPlanModel, { headers: this.headers });
}
}

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