872 lines
34 KiB
TypeScript
872 lines
34 KiB
TypeScript
import {HostedByCollectedFrom, Journal, Project, RelationResult} from "../../utils/result-preview/result-preview";
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import {Context, Reference} from "../../utils/entities/resultLandingInfo";
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import {Injectable} from '@angular/core';
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import {properties} from "../../../../environments/environment";
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import {StringUtils} from "../../utils/string-utils.class";
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@Injectable({
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providedIn: 'root'
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})
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export class ParsingFunctions {
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public eoscSubjects = [
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{label: 'EOSC::Jupyter Notebook', link: 'https://' + (properties.environment == 'beta'?'beta.':'') + 'marketplace.eosc-portal.eu/services?tag=EOSC%3A%3AJupyter+Notebook', value: 'Jupyter Notebook'},
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{label: 'EOSC::RO-crate', link: 'https://' + (properties.environment == 'beta'?'beta.':'') + 'marketplace.eosc-portal.eu/services?tag=EOSC%3A%3ARO-crate', value: 'RO-crate'},
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{label: 'EOSC::Galaxy Workflow', link: 'https://' + (properties.environment == 'beta'?'beta.':'') + 'marketplace.eosc-portal.eu/services?tag=EOSC%3A%3AGalaxy+Workflow', value: 'Galaxy Workflow'},
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{label: 'EOSC::Twitter Data', link: 'https://' + (properties.environment == 'beta'?'beta.':'') + 'marketplace.eosc-portal.eu/services?tag=EOSC%3A%3ATwitter+Data', value: 'Twitter Data'}
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]
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public notebookInSubjects: boolean = false;
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private notebookKeyword: string = "eosc jupyter notebook";
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private notebook_label: string = "EOSC";
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private notebook_value: string = "EOSC Jupyter Notebook";
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public open = 'lock_open';
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public closed = 'lock';
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public unknown = 'question_mark';
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private instanceWithDoiExists: boolean = false;
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constructor() {
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}
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public ngOnDestroy() {
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}
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public parseFundingByProjects(fundedByProjects: Project[], relation: any,
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provenanceActionVocabulary: any): Project[] {
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if (fundedByProjects == undefined) {
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fundedByProjects = [];
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}
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let fundedByProject: Project = {
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"id": "", "acronym": "", "title": "",
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"funderShortname": "", "funderName": "",
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"funding": "", "code": "", "provenanceAction": "", "validated": false
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};
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if (relation.title != 'unidentified') {
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fundedByProject['id'] = relation['to'].content;
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fundedByProject['acronym'] = relation.acronym;
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fundedByProject['title'] = relation.title;
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fundedByProject['code'] = relation.code;
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if(relation.validated && relation.validated.date) {
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fundedByProject['validated'] = true;
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}
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if (provenanceActionVocabulary != null && relation.provenanceaction in provenanceActionVocabulary) {
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fundedByProject['provenanceAction'] = provenanceActionVocabulary[relation.provenanceaction];
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}
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} else {
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fundedByProject['id'] = "";
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fundedByProject['acronym'] = "";
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fundedByProject['title'] = "";
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fundedByProject['code'] = "";
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fundedByProject['provenanceAction'] = "";
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}
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if (relation.hasOwnProperty("funding")) {
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let funding: { "funderName": string, "funderShortname": string, "stream": string };
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funding = this.parseFundingTrees(relation.funding);
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if (funding.funderName) {
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fundedByProject['funderName'] = funding.funderName;
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}
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if (funding.funderShortname) {
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fundedByProject['funderShortname'] = funding.funderShortname;
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}
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if (funding.stream) {
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fundedByProject['funding'] = funding.stream;
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}
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}
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fundedByProjects.push(fundedByProject);
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return fundedByProjects;
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}
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// publication & research data : for fundedByProjects | project landing : for funding
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public parseFundingTrees(fundingTree: any): { "funderName": string, "funderShortname": string, "stream": string } {
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let funding: { "funderName": string, "funderShortname": string, "stream": string } = {
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"funderName": "",
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"funderShortname": "",
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"stream": ""
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};
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let length = Array.isArray(fundingTree) ? fundingTree.length : 1;
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for (let i = 0; i < length; i++) {
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let fundingData = Array.isArray(fundingTree) ? fundingTree[i] : fundingTree;
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if (fundingData.hasOwnProperty("funder")) {
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funding.funderShortname = fundingData['funder'].shortname;
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funding.funderName = fundingData['funder'].name;
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}
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funding.stream = this.addFundingLevel0(fundingData, funding.stream);
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funding.stream = this.addFundingLevel1(fundingData, funding.stream);
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funding.stream = this.addFundingLevel2(fundingData, funding.stream);
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}
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return funding;
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}
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addFundingLevel0(parent: string, fundingStream: string): string {
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if (parent.hasOwnProperty("funding_level_0")) {
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let level0 = parent['funding_level_0'];
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fundingStream += (fundingStream) ? " ; " : "";
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fundingStream += level0.name;
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}
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return fundingStream;
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}
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addFundingLevel1(parent: string, fundingStream: string): string {
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if (parent.hasOwnProperty("funding_level_1")) {
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let level1 = parent['funding_level_1'];
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// For projects' parsing
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if (level1.hasOwnProperty("parent")) {
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fundingStream = this.addFundingLevel0(level1.parent, fundingStream);
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}
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fundingStream += (fundingStream) ? " | " : "";
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fundingStream += level1.name;
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}
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return fundingStream;
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}
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addFundingLevel2(parent: string, fundingStream: string): string {
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if (parent.hasOwnProperty("funding_level_2")) {
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let level2 = parent['funding_level_2'];
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// For projects' parsing
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if (level2.hasOwnProperty("parent")) {
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fundingStream = this.addFundingLevel1(level2.parent, fundingStream);
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}
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fundingStream += (fundingStream) ? " | " : "";
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fundingStream += level2.name;
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}
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return fundingStream;
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}
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// publication & dataset landing : for collectedFrom
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parseCollectedFrom(collectedFrom: { "name": string, "id": string }[],
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_collectedFrom: any) {
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let length: number = collectedFrom.length;
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collectedFrom[length] = {"name": "", "id": ""};
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collectedFrom[length]['name'] = _collectedFrom.name;
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collectedFrom[length]['id'] = _collectedFrom.id;
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}
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// publication & dataset landing : for downloadFrom
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addPublisherToHostedBy_collectedFrom(hostedBy_collectedFrom: HostedByCollectedFrom[],
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publisher: string, journal: Journal,
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identifiers: Map<string, string[]>/*, title: { "name": string, "url": string, "accessMode": string}*/) {
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if (!this.instanceWithDoiExists && publisher && identifiers != null && identifiers.has('doi')) {
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if (hostedBy_collectedFrom == null) {
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hostedBy_collectedFrom = [];
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}
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let available: HostedByCollectedFrom = {
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downloadNames: [],
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downloadUrl: "",
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collectedNamesAndIds: null,
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accessRight: "",
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types: [],
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years: [],
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accessRightIcon: ""
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};
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if (journal && journal.journal) {
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available.downloadNames.push(publisher + "/ " + journal['journal']);
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} else {
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available.downloadNames.push(publisher);
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}
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available.downloadUrl = properties.doiURL + identifiers.get("doi")[0];;
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available.accessRightIcon = this.unknown;
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/*
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if(title != undefined && title['url'] == "") {
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title['url'] = url;
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}
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*/
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hostedBy_collectedFrom.push(available);
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}
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return hostedBy_collectedFrom;
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}
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// publication & dataset landing : for downloadFrom
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parseDownloadFrom(downloadFrom: Map<string, { "url": string[], "accessMode": string[], "bestAccessMode": string }>, instance: any, url: string) {
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let key: string = instance['hostedby'].name;
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if (key) {
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this.addUrlAndAccessMode(downloadFrom, instance, key, url);
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}
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}
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// publication & dataset landing : for publishedIn
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parsePublishedIn(publishedIn: Map<string, { "url": string[], "accessMode": string[], "bestAccessMode": string }>, instance: any, result: any, url: string, counter: number): number {
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if (result != null && result.hasOwnProperty("source")) {
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let key: string;
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if (Array.isArray(result.source)) {
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if (counter == result.source.length) {
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counter--;
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}
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key = result['source'][counter];
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} else {
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key = result['source'];
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}
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if (key) {
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this.addUrlAndAccessMode(publishedIn, instance, key, url);
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counter++;
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}
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}
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return counter;
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}
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// publication & dataset landing : for downloadFrom and publishedIn
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addUrlAndAccessMode(mapStructure: Map<string, { "url": string[], "accessMode": string[], "bestAccessMode": string }>, instance: any, key: string, url: string) {
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if (!mapStructure.has(key)) {
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mapStructure.set(key, {"url": null, "accessMode": null, "bestAccessMode": null});
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}
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if (mapStructure.get(key)['url'] == null) {
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mapStructure.get(key)['url'] = new Array<string>();
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}
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if (url) {
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mapStructure.get(key)['url'].push(url);
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}
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if (mapStructure.get(key)['accessMode'] == null) {
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mapStructure.get(key)['accessMode'] = new Array<string>();
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}
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if (instance.hasOwnProperty("accessright")) {
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if (url) {
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mapStructure.get(key)['accessMode'].push(instance['accessright'].classname);
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}
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if (this.changeBestAccessMode(mapStructure.get(key)['bestAccessMode'], instance['accessright'])) {
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mapStructure.get(key)['bestAccessMode'] = instance['accessright'].classname;
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}
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} else if (url) {
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mapStructure.get(key)['accessMode'].push("");
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}
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}
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parseHostedBy_collectedFrom(hostedBy_collectedFrom: HostedByCollectedFrom[],
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instance: any, url: string, globalAccessRight: string) {
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if(!url) {
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return;
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}
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let available: HostedByCollectedFrom = {
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"downloadNames": [],
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"downloadUrl": null,
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"collectedNamesAndIds": new Map(),
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"accessRight": null,
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"accessRightIcon": "",
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"types": [],
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"years": [],
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"license": ""
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};
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if (instance.hasOwnProperty("hostedby")) {
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let downloadNames: Set<string> = new Set();
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let length = Array.isArray(instance['hostedby']) ? instance['hostedby'].length : 1;
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for (let i = 0; i < length; i++) {
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let hostedBy = Array.isArray(instance['hostedby']) ? instance['hostedby'][i] : instance['hostedby'];
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if (hostedBy.name && hostedBy.name != "other resources" && hostedBy.name != "Unknown Repository") {
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downloadNames.add(hostedBy.name);
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}
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}
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available.downloadNames = Array.from(downloadNames);
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if (available.downloadNames.length == 0) {
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available.downloadNames.push(url.substring(0, 30) + '...'); // substring(from, to);
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}
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}
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if (instance.hasOwnProperty("collectedfrom")) {
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let length = Array.isArray(instance['collectedfrom']) ? instance['collectedfrom'].length : 1;
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for (let i = 0; i < length; i++) {
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let collectedFrom = Array.isArray(instance['collectedfrom']) ? instance['collectedfrom'][i] : instance['collectedfrom'];
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if(collectedFrom.name && collectedFrom.id) {
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available.collectedNamesAndIds.set(collectedFrom.name, collectedFrom.id);
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}
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}
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}
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if (instance.hasOwnProperty("instancetype")) {
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let types: Set<string> = new Set();
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let length = Array.isArray(instance['instancetype']) ? instance['instancetype'].length : 1;
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for (let i = 0; i < length; i++) {
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let instanceType = Array.isArray(instance['instancetype']) ? instance['instancetype'][i] : instance['instancetype'];
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if(instanceType.classname && instanceType.classname.toLowerCase() !== "unknown") {
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types.add(instanceType.classname);
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}
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}
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available.types = Array.from(types);
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}
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if (instance.hasOwnProperty("dateofacceptance")) {
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let years: Set<string> = new Set();
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let length = Array.isArray(instance['dateofacceptance']) ? instance['dateofacceptance'].length : 1;
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for (let i = 0; i < length; i++) {
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let dateOfAcceptance = Array.isArray(instance['dateofacceptance']) ? instance['dateofacceptance'][i] : instance['dateofacceptance'];
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let date: string = (dateOfAcceptance) + ""; // transform to string in case it is an integer
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years.add((date && (date).indexOf('-') !== -1) ? date.split('-')[0] : date);
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}
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available.years = Array.from(years);
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}
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available['downloadUrl'] = url;
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if(url.includes("doi.org/")) {
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this.instanceWithDoiExists = true;
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}
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if (instance.hasOwnProperty("accessright")) {
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let length = Array.isArray(instance['accessright']) ? instance['accessright'].length : 1;
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for (let i = 0; i < length; i++) {
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let accessRight = Array.isArray(instance['accessright']) ? instance['accessright'][i] : instance['accessright'];
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if (this.changeBestAccessMode(available.accessRight, accessRight)) {
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available.accessRight = accessRight.classname;
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if (this.changeBestAccessMode(globalAccessRight, accessRight)) {
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globalAccessRight = accessRight.classname;
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}
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}
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}
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}
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if (available.accessRight) {
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if (available.accessRight.toLowerCase().indexOf('open') !== -1) {
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available.accessRightIcon = this.open;
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} else if (available.accessRight.toLowerCase().indexOf('not available') !== -1) {
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available.accessRightIcon = this.unknown;
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} else {
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available.accessRightIcon = this.closed;
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}
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} else {
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available.accessRightIcon = this.unknown;
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}
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if(instance.hasOwnProperty("license")) {
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available.license = Array.isArray(instance['license']) ? instance['license'][0] : instance['license'];
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}
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hostedBy_collectedFrom.push(available);
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}
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// publication & dataset landing : for downloadFrom and publishedIn
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changeBestAccessMode(currentAccessMode: string, accessMode: any): boolean {
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if (!accessMode) {
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return false;
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}
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accessMode = accessMode.classid;
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switch (currentAccessMode) {
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case null:
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if (accessMode != "UNKNOWN") {
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return true;
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}
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return false;
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case "CLOSED":
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if (accessMode == "OPEN" ||
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accessMode == "OPEN SOURCE" ||
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accessMode == "EMBARGO" ||
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accessMode == "RESTRICTED") {
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return true;
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}
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return false;
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case "RESTRICTED":
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if (accessMode == "OPEN" ||
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accessMode == "OPEN SOURCE" ||
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accessMode == "EMBARGO") {
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return true;
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}
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return false;
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case "EMBARGO":
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if (accessMode == "OPEN" ||
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accessMode == "OPEN SOURCE") {
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return true;
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}
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return false;
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case "OPEN SOURCE":
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if (accessMode == "OPEN") {
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return true;
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}
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return false;
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}
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return false;
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}
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// publication & dataset & software & orp landing : for relatedResearchResults
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parseRelatedResearchResults(relatedResearchResults: RelationResult[], relation: any, provenanceAction: string):
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RelationResult[] {
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if (relatedResearchResults == undefined) {
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relatedResearchResults = []
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}
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relatedResearchResults.push(this.parseRelatedOrSimilarResearchResult(relation, "trust", provenanceAction));
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return relatedResearchResults;
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}
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// publication & dataset & software & orp landing : for supplementaryResearchResults
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parseSupplementaryResearchResults(supplementaryResearchResults: RelationResult[], relation: any): RelationResult[] {
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if (supplementaryResearchResults == undefined) {
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supplementaryResearchResults = [];
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}
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supplementaryResearchResults.push(this.parseRelatedOrSimilarResearchResult(relation, "trust"));
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return supplementaryResearchResults;
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}
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// publication & dataset & software & orp landing : for supplementedByResearchResults
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parseSupplementedByResearchResults(supplementedByResearchResults: RelationResult[], relation: any): RelationResult[] {
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if (supplementedByResearchResults == undefined) {
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supplementedByResearchResults = [];
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}
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supplementedByResearchResults.push(this.parseRelatedOrSimilarResearchResult(relation, "trust"));
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return supplementedByResearchResults;
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}
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// publication & dataset & software & orp landing : for similarResearchResults
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parseSimilarResearchResults(similarResearchResults: RelationResult[], relation: any): RelationResult[] {
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if (similarResearchResults == undefined) {
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similarResearchResults = [];
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}
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similarResearchResults.push(this.parseRelatedOrSimilarResearchResult(relation, "similarity"));
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return similarResearchResults;
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}
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parseResults(researchResults: RelationResult[], relation, provenanceAction: string, relationName: string): RelationResult[] {
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if (researchResults == undefined) {
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researchResults = [];
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}
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let researchResult: RelationResult = {
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name: "",
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id: "",
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date: "",
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percentage: null,
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percentageName: null,
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class: "",
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provenanceAction: provenanceAction,
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relationName: relationName
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};
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// researchResult.relationName = relation.to.class;
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if(relation['resulttype']) {
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if (relation['resulttype'].classname == "publication") {
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researchResult['class'] = "publication";
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} else if (relation['resulttype'].classname == "dataset") {
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researchResult['class'] = "dataset";
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} else if (relation['resulttype'].classname == "software") {
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researchResult['class'] = "software";
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} else if (relation['resulttype'].classname == "other") {
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researchResult['class'] = "other";
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}
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}
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researchResult['id'] = relation['to'].content;
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let titleName = Array.isArray(relation['title']) ? relation['title'][0].content : (relation['title']?relation['title'].content:null);
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researchResult['name'] = titleName;
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if(!researchResult['name']) {
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researchResult['name'] = "[no title available]";
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}
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if (relation.hasOwnProperty("dateofacceptance")) {
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var date: string = ((Array.isArray(relation.dateofacceptance)) ? (relation.dateofacceptance[0]) : (relation.dateofacceptance)) + ""; // transform to string in case it is an integer
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researchResult['date'] = (date && (date).indexOf('-') !== -1) ? date.split('-')[0] : date;
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}
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//researchResult['date'] = relation.dateofacceptance.substring(0,4);;
|
|
let percentageName: string;
|
|
if(relation.trust) {
|
|
percentageName = "trust";
|
|
} else if(relation.similarity) {
|
|
percentageName = "similarity";
|
|
}
|
|
if(percentageName) {
|
|
researchResult['percentage'] = Math.round(relation[percentageName] * 100);
|
|
researchResult['percentageName'] = percentageName;
|
|
}
|
|
researchResults.push(researchResult);
|
|
return researchResults;
|
|
}
|
|
|
|
parseResearchResults(researchResults: RelationResult[], relation: any, percentageName: string = "trust"): RelationResult[] {
|
|
if (researchResults == undefined) {
|
|
researchResults = [];
|
|
}
|
|
researchResults.push(this.parseRelatedOrSimilarResearchResult(relation, percentageName));
|
|
return researchResults;
|
|
}
|
|
|
|
// publication & dataset & software & orp landing : for relatedResearchResults and similarResearchResults
|
|
parseRelatedOrSimilarResearchResult(relation: any, percentageName: string, provenanceAction: string = null): RelationResult {
|
|
let researchResult: RelationResult = {
|
|
name: "",
|
|
id: "",
|
|
date: "",
|
|
percentage: null,
|
|
class: "",
|
|
provenanceAction: provenanceAction
|
|
};
|
|
if(relation['resulttype']) {
|
|
if (relation['resulttype'].classname == "publication") {
|
|
researchResult['class'] = "publication";
|
|
} else if (relation['resulttype'].classname == "dataset") {
|
|
researchResult['class'] = "dataset";
|
|
} else if (relation['resulttype'].classname == "software") {
|
|
researchResult['class'] = "software";
|
|
} else if (relation['resulttype'].classname == "other") {
|
|
researchResult['class'] = "other";
|
|
}
|
|
}
|
|
researchResult['id'] = relation['to'].content;
|
|
let titleName = Array.isArray(relation['title']) ? relation['title'][0].content : (relation['title']?relation['title'].content:null);
|
|
researchResult['name'] = titleName;
|
|
if(!researchResult['name']) {
|
|
researchResult['name'] = "[no title available]";
|
|
}
|
|
if (relation.hasOwnProperty("dateofacceptance")) {
|
|
var date: string = ((Array.isArray(relation.dateofacceptance)) ? (relation.dateofacceptance[0]) : (relation.dateofacceptance)) + ""; // transform to string in case it is an integer
|
|
researchResult['date'] = (date && (date).indexOf('-') !== -1) ? date.split('-')[0] : date;
|
|
}
|
|
//researchResult['date'] = relation.dateofacceptance.substring(0,4);;
|
|
researchResult['percentage'] = Math.round(relation[percentageName] * 100);
|
|
return researchResult;
|
|
}
|
|
|
|
sortByPercentage(results: RelationResult[]): RelationResult[] {
|
|
if (results) {
|
|
return results.sort(function (a, b) {
|
|
return b["percentage"] - a["percentage"]
|
|
});
|
|
}
|
|
return results;
|
|
}
|
|
|
|
// publication & dataset landing : for identifiers
|
|
parseIdentifiers(pid: any): Map<string, string[]> {
|
|
let identifiers = new Map<string, string[]>();
|
|
|
|
if (pid.hasOwnProperty("classid") && pid['classid'] != "") {
|
|
if (pid.classid == "doi" || pid.classid == "pmc" || pid.classid == "handle" || pid.classid == "pmid" || pid.classid == "re3data") {
|
|
if (!identifiers.has(pid.classid)) {
|
|
identifiers.set(pid.classid, new Array<string>());
|
|
}
|
|
identifiers.get(pid.classid).push(pid.content+"");
|
|
}
|
|
} else {
|
|
for (let i = 0; i < pid.length; i++) {
|
|
if (pid[i].classid == "doi" || pid[i].classid == "pmc" || pid[i].classid == "handle" || pid[i].classid == "pmid" || pid[i].classid == "re3data") {
|
|
if (!identifiers.has(pid[i].classid)) {
|
|
identifiers.set(pid[i].classid, new Array<string>());
|
|
}
|
|
identifiers.get(pid[i].classid).push(pid[i].content+"");
|
|
}
|
|
}
|
|
}
|
|
return identifiers;
|
|
}
|
|
|
|
// publication & dataset landing : for subjects and otherSubjects and classifiedSubjects
|
|
parseAllSubjects(_subjects: any, vocabulary: any): [string[], Map<string, string[]>, Map<string, string[]>, string[], string[], any[]] {
|
|
let eoscSubjectsFound = [];
|
|
let subjects: string[];
|
|
let otherSubjects: Map<string, string[]>;
|
|
let classifiedSubjects: Map<string, string[]>;
|
|
let fos: string[];
|
|
let sdg: string[];
|
|
|
|
let setOfEoscSubjects: Set<string> = new Set();
|
|
|
|
let subject;
|
|
let length = Array.isArray(_subjects) ? _subjects.length : 1;
|
|
|
|
for (let i = 0; i < length; i++) {
|
|
subject = Array.isArray(_subjects) ? _subjects[i] : _subjects;
|
|
if (subject.classid != "") {
|
|
if (subject.classid == "keyword") {
|
|
let content: string = subject.content+"";
|
|
let checkAndAddEoscSubjectResp = this.checkAndAddEoscSubject(setOfEoscSubjects, classifiedSubjects, eoscSubjectsFound, subject, content);
|
|
let found: boolean = checkAndAddEoscSubjectResp["found"];
|
|
if(found) {
|
|
setOfEoscSubjects = checkAndAddEoscSubjectResp["setOfEoscSubject"];
|
|
classifiedSubjects = checkAndAddEoscSubjectResp["classifiedSubjects"];
|
|
eoscSubjectsFound = checkAndAddEoscSubjectResp["eoscSubjectsFound"];
|
|
} else {
|
|
if (subjects == undefined) {
|
|
subjects = new Array<string>();
|
|
}
|
|
subjects.push(content);
|
|
}
|
|
} else if (!vocabulary || vocabulary[subject.classid] || subject.classid === "SDG" || subject.classid === "FOS") {
|
|
// if (subject.inferred && subject.inferred == true) {
|
|
if(subject.classid === "SDG") {
|
|
if (sdg == undefined) {
|
|
sdg = new Array<string>();
|
|
}
|
|
sdg.push(subject.content+"");
|
|
} else if(subject.classid === "FOS") {
|
|
if (fos == undefined) {
|
|
fos = new Array<string>();
|
|
}
|
|
fos.push(subject.content+"");
|
|
} else {
|
|
if (classifiedSubjects == undefined) {
|
|
classifiedSubjects = new Map<string, string[]>();
|
|
}
|
|
|
|
let content: string = subject.content+"";
|
|
let checkAndAddEoscSubjectResp = this.checkAndAddEoscSubject(setOfEoscSubjects, classifiedSubjects, eoscSubjectsFound, subject, content);
|
|
let found: boolean = checkAndAddEoscSubjectResp["found"];
|
|
if(found) {
|
|
setOfEoscSubjects = checkAndAddEoscSubjectResp["setOfEoscSubject"];
|
|
classifiedSubjects = checkAndAddEoscSubjectResp["classifiedSubjects"];
|
|
eoscSubjectsFound = checkAndAddEoscSubjectResp["eoscSubjectsFound"];
|
|
} else {
|
|
if (!classifiedSubjects.has(subject.classname)) {
|
|
classifiedSubjects.set(subject.classname, new Array<string>());
|
|
}
|
|
classifiedSubjects.get(subject.classname).push(content);
|
|
}
|
|
}
|
|
} else {
|
|
let content: string = subject.content+"";
|
|
let checkAndAddEoscSubjectResp = this.checkAndAddEoscSubject(setOfEoscSubjects, classifiedSubjects, eoscSubjectsFound, subject, content);
|
|
let found: boolean = checkAndAddEoscSubjectResp["found"];
|
|
if(found) {
|
|
setOfEoscSubjects = checkAndAddEoscSubjectResp["setOfEoscSubject"];
|
|
classifiedSubjects = checkAndAddEoscSubjectResp["classifiedSubjects"];
|
|
eoscSubjectsFound = checkAndAddEoscSubjectResp["eoscSubjectsFound"];
|
|
} else {
|
|
let classname: string = subject.classname + "";
|
|
if (subjects == undefined) {
|
|
subjects = new Array<string>();
|
|
}
|
|
subjects.push(content);
|
|
}
|
|
}
|
|
}
|
|
}
|
|
return [subjects, otherSubjects, classifiedSubjects, fos, sdg, eoscSubjectsFound];
|
|
}
|
|
|
|
checkAndAddEoscSubject(setOfEoscSubjects: Set<string>, classifiedSubjects, eoscSubjectsFound, subject, content) {
|
|
let found: boolean = false;
|
|
|
|
if(!setOfEoscSubjects.has(content)) {
|
|
// looping through our declared array
|
|
this.eoscSubjects.forEach(item => {
|
|
if (content && content == item.label) {
|
|
if (classifiedSubjects == undefined) {
|
|
classifiedSubjects = new Map<string, string[]>();
|
|
}
|
|
|
|
if (!classifiedSubjects.has("EOSC")) {
|
|
classifiedSubjects.set("EOSC", new Array<string>());
|
|
}
|
|
|
|
found = true;
|
|
eoscSubjectsFound.push(item);
|
|
setOfEoscSubjects.add(content);
|
|
classifiedSubjects.get("EOSC").push(item.value);
|
|
}
|
|
});
|
|
}
|
|
return {"found": found, "setOfEoscSubject": setOfEoscSubjects, "classifiedSubjects": classifiedSubjects, "eoscSubjectsFound": eoscSubjectsFound};
|
|
}
|
|
|
|
parseContexts(_contexts: any): Context[] {
|
|
let contexts = new Array<Context>();
|
|
|
|
let position = 0;
|
|
let labels = "";
|
|
let context;
|
|
let length = Array.isArray(_contexts) ? _contexts.length : 1;
|
|
for (let i = 0; i < length; i++) {
|
|
let numOfCategories: number = 0; // count categories with label
|
|
context = Array.isArray(_contexts) ? _contexts[i] : _contexts;
|
|
|
|
if (context.label && context.hasOwnProperty("type") && (context['type'] == "community" || context['type'] == "ri")) {
|
|
if (context.hasOwnProperty("category")) {
|
|
let category;
|
|
let length2 = Array.isArray(context['category']) ? context['category'].length : 1;
|
|
for (let z = 0; z < length2; z++) {
|
|
let numOfConcepts: number = 0; // count category concepts with label
|
|
category = Array.isArray(context['category']) ? context['category'][z] : context['category'];
|
|
if (category.label && category.hasOwnProperty("concept")) {
|
|
let categoryConcept;
|
|
let length1 = Array.isArray(category['concept']) ? category['concept'].length : 1;
|
|
for (let j = 0; j < length1; j++) {
|
|
categoryConcept = Array.isArray(category['concept']) ? category['concept'][j] : category['concept'];
|
|
|
|
// initalize if there is concept label or this is the last concept of the category and there were no concepts
|
|
// otherwise we could have multiple entries for the same category but without concepts
|
|
if(categoryConcept.label || (numOfConcepts == 0 && j == (length1 - 1))) {
|
|
contexts[position] = {
|
|
"labelContext": "", "idContext": "",
|
|
"labelCategory": "", "idCategory": "",
|
|
"labelConcept": "", "idConcept": ""
|
|
};
|
|
contexts[position]['labelContext'] = context.label;
|
|
contexts[position]['idContext'] = context.id;
|
|
contexts[position]['labelCategory'] = category.label;
|
|
contexts[position]['idCategory'] = category.id;
|
|
contexts[position]['labelConcept'] = categoryConcept.label ? categoryConcept.label : null;
|
|
contexts[position]['idConcept'] = categoryConcept.label ? categoryConcept.id : null;
|
|
|
|
position++;
|
|
numOfConcepts++;
|
|
}
|
|
}
|
|
} else if(category.label || (numOfCategories == 0 && z == (length2 - 1))) {
|
|
contexts[position] = {"labelContext": "", "idContext": "",
|
|
"labelCategory": "", "idCategory": "",
|
|
"labelConcept": "", "idConcept": ""};
|
|
contexts[position]['labelContext'] = context.label;
|
|
contexts[position]['idContext'] = context.id;
|
|
contexts[position]['labelCategory'] = category.label ? category.label : null;
|
|
contexts[position]['idCategory'] = category.label ? category.id : null;
|
|
contexts[position]['labelConcept'] = null;
|
|
contexts[position]['idConcept'] = null;
|
|
position++;
|
|
numOfCategories++;
|
|
}
|
|
}
|
|
} else {
|
|
contexts[position] = {"labelContext": "", "idContext": "",
|
|
"labelCategory": "", "idCategory": "",
|
|
"labelConcept": "", "idConcept": ""};
|
|
contexts[position]['labelContext'] = context.label;
|
|
contexts[position]['idContext'] = context.id;
|
|
contexts[position]['labelCategory'] = null;
|
|
contexts[position]['idCategory'] = null;
|
|
contexts[position]['labelConcept'] = null;
|
|
contexts[position]['idConcept'] = null;
|
|
contexts[position]['new'] = false;
|
|
position++;
|
|
}
|
|
}
|
|
}
|
|
return contexts;
|
|
}
|
|
public static getEnermapsConceptId(contexts: any): string{
|
|
let enermapsconcepts = contexts.filter(c=> {return c.idCategory == "enermaps::selection" && c.idConcept});
|
|
return enermapsconcepts && enermapsconcepts.length > 0?enermapsconcepts[0].idConcept.split("enermaps::selection::")[1]:null;
|
|
// return "hotmaps_heat_tot_curr_density"
|
|
}
|
|
parseTypes(types: string[], uniqueTypes: Set<string>, instance: any) {
|
|
if (instance && instance.hasOwnProperty("instancetype") && instance['instancetype'].classname) {
|
|
if (!uniqueTypes.has(instance['instancetype'].classname)) {
|
|
types.push(instance['instancetype'].classname);
|
|
uniqueTypes.add(instance['instancetype'].classname);
|
|
}
|
|
}
|
|
}
|
|
|
|
parseLanguages(_languages: any) {
|
|
var languages = new Array<string>();
|
|
|
|
if (!Array.isArray(_languages)) {
|
|
if (_languages.classname != "Undetermined" && _languages.classname) {
|
|
languages.push(_languages.classname);
|
|
}
|
|
} else {
|
|
for (let i = 0; i < _languages.length; i++) {
|
|
if (_languages[i].classname != "Undetermined" && _languages[i].classname) {
|
|
languages.push(_languages[i].classname);
|
|
}
|
|
}
|
|
}
|
|
return languages;
|
|
}
|
|
|
|
parseCountries(_countries: any) {
|
|
var countries = new Array<string>();
|
|
|
|
if (!Array.isArray(_countries)) {
|
|
if (_countries.classname != "Undetermined" && _countries.classname) {
|
|
countries.push(_countries.classname);
|
|
}
|
|
} else {
|
|
for (let i = 0; i < countries.length; i++) {
|
|
if (_countries[i].classname != "Undetermined" && _countries[i].classname) {
|
|
countries.push(_countries[i].classname);
|
|
}
|
|
}
|
|
}
|
|
return countries;
|
|
}
|
|
|
|
parseProgrammingLanguages(_pLanguages) {
|
|
var pLanguages = new Array<string>();
|
|
|
|
if (!Array.isArray(_pLanguages)) {
|
|
if (_pLanguages.classname != "Undetermined" && _pLanguages.classname) {
|
|
pLanguages.push(_pLanguages.classname);
|
|
}
|
|
} else {
|
|
for (let i = 0; i < _pLanguages.length; i++) {
|
|
if (_pLanguages[i].classname != "Undetermined" && _pLanguages[i].classname) {
|
|
pLanguages.push(_pLanguages[i].classname);
|
|
}
|
|
}
|
|
}
|
|
return pLanguages;
|
|
}
|
|
|
|
parseReferences(citations: any): Reference[] {
|
|
let references: Reference[] = [];
|
|
citations = Array.isArray(citations) ? citations : [citations];
|
|
citations.forEach(citation => {
|
|
let reference: Reference = {name: null, ids: []};
|
|
if(citation.rawText) {
|
|
reference.name = citation.rawText;
|
|
}
|
|
if(citation.id) {
|
|
let ids: any[] = Array.isArray(citation.id) ? citation.id : [citation.id];
|
|
ids.forEach(id => {
|
|
reference.ids.push({
|
|
type: id.type,
|
|
value: id.value,
|
|
trust: id.confidenceLevel
|
|
});
|
|
});
|
|
}
|
|
references[citation.position - 1] = reference;
|
|
});
|
|
return references;
|
|
}
|
|
static parseRelCanonicalId(record, type){
|
|
try{
|
|
if(record["result"]["metadata"]["oaf:entity"][("oaf:"+type)]["children"] && record["result"]["metadata"]["oaf:entity"][("oaf:"+type)]["children"][type]){
|
|
for(let child of record["result"]["metadata"]["oaf:entity"][("oaf:"+type)]["children"][type]){
|
|
return child["objidentifier"];
|
|
}
|
|
}
|
|
}catch(e){
|
|
// console.error(e);
|
|
}
|
|
return record["result"]["header"]["dri:objIdentifier"];
|
|
|
|
}
|
|
|
|
parseDescription(description):string[] {
|
|
|
|
let abstracts = [];
|
|
if(!Array.isArray(description)) {
|
|
abstracts = [description ? String(description) : ""];
|
|
} else {
|
|
abstracts = description.map( x => String(x));
|
|
}
|
|
try{
|
|
abstracts = abstracts.map( x => StringUtils.HTMLToString(x));
|
|
} catch (e) {}
|
|
abstracts =abstracts.sort((a,b) => b.length - a.length);
|
|
return abstracts;
|
|
}
|
|
|
|
}
|