258 lines
11 KiB
TypeScript
258 lines
11 KiB
TypeScript
import {Component, Input, Output, EventEmitter,ViewChild} from '@angular/core';
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import {Observable} from 'rxjs/Observable';
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import {SearchCrossrefService} from '../../claim-utils/service/searchCrossref.service';
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import {SearchDataciteService} from '../../claim-utils/service/searchDatacite.service';
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import {ModalLoading} from '../../../utils/modal/loading.component';
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import {Dates, DOI} from '../../../utils/string-utils.class';
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import {ClaimResult} from '../../claim-utils/claimEntities.class';
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import{EnvProperties} from '../../../utils/properties/env-properties';
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@Component({
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selector: 'bulk-claim',
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template: `
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<div class="uk-animation " style=" ">
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<form class=" uk-padding ">
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<div class="uk-clearfix">
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<a class="uk-float-right" uk-toggle="target: #uploadInfo; animation: uk-animation-fade"><span class="uk-icon">
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<svg xmlns="http://www.w3.org/2000/svg" width="20" height="20" viewBox="0 0 20 20" icon="info" ratio="1"><path d="M12.13,11.59 C11.97,12.84 10.35,14.12 9.1,14.16 C6.17,14.2 9.89,9.46 8.74,8.37 C9.3,8.16 10.62,7.83 10.62,8.81 C10.62,9.63 10.12,10.55 9.88,11.32 C8.66,15.16 12.13,11.15 12.14,11.18 C12.16,11.21 12.16,11.35 12.13,11.59 C12.08,11.95 12.16,11.35 12.13,11.59 L12.13,11.59 Z M11.56,5.67 C11.56,6.67 9.36,7.15 9.36,6.03 C9.36,5 11.56,4.54 11.56,5.67 L11.56,5.67 Z"></path><circle fill="none" stroke="#000" stroke-width="1.1" cx="10" cy="10" r="9"></circle></svg>
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</span> What is upload mode? </a>
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</div>
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<div id="uploadInfo" class="uk-card uk-card-default uk-card-body uk-margin-small" hidden>
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<a uk-toggle="target: #uploadInfo; animation: uk-animation-fade" class="uk-float-right"><span class="uk-icon">
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<svg width="20" height="20" viewBox="0 0 20 20" xmlns="http://www.w3.org/2000/svg" icon="close" ratio="1"><path fill="none" stroke="#000" stroke-width="1.06" d="M16,16 L4,4"></path><path fill="none" stroke="#000" stroke-width="1.06" d="M16,4 L4,16"></path></svg>
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</span></a>
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<div class="uk-text-bold"><span class="uk-icon">
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<svg xmlns="http://www.w3.org/2000/svg" width="20" height="20" viewBox="0 0 20 20" icon="info" ratio="1"><path d="M12.13,11.59 C11.97,12.84 10.35,14.12 9.1,14.16 C6.17,14.2 9.89,9.46 8.74,8.37 C9.3,8.16 10.62,7.83 10.62,8.81 C10.62,9.63 10.12,10.55 9.88,11.32 C8.66,15.16 12.13,11.15 12.14,11.18 C12.16,11.21 12.16,11.35 12.13,11.59 C12.08,11.95 12.16,11.35 12.13,11.59 L12.13,11.59 Z M11.56,5.67 C11.56,6.67 9.36,7.15 9.36,6.03 C9.36,5 11.56,4.54 11.56,5.67 L11.56,5.67 Z"></path><circle fill="none" stroke="#000" stroke-width="1.1" cx="10" cy="10" r="9"></circle></svg>
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</span> Upload information:</div>
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Upload a csv file containing a list of DOIs. For each DOI found in the file, metadata will be fetched from CrossRef or Datacite.
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Available results will be added to your selected resarch results list in order to be linked with the selected Projects and Contexts.
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<div class="uk-article-meta">
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CSV format:
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<ul class="uk-list">
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<li>The format of CSV file should be "DOI","ACCESS_MODE","DATE".</li>
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<li>The value "DOI" is required </li>
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<li>Access mode column should have values: "OPEN","CLOSED" or "EMBARGO".</li>
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<li>Date column valid format is YYYY-MM-DD and is required when access mode has value EMBARGO.</li>
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<li>In case access mode is not available default value is "OPEN".</li>
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</ul>
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</div>
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</div>
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<div for="exampleInputFile">Upload a DOI csv file:</div>
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<label for="exampleInputFile">Select a file</label>
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<input id="exampleInputFile" class="uk-width-1-2" type="file" (change)="fileChangeEvent($event)" placeholder="Upload file..." />
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<button class="uk-button uk-button-success" [class.disabled]="!enableUpload" type="button" (click)="upload()">Upload</button>
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<div *ngIf="showReport" uk-alert class="uk-alert uk-alert-primary" role="alert" >
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<a class="uk-alert-close" uk-close></a>
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<div>Uploaded file contains {{allIds.length}} rows. {{foundIds.length}} results were sucefully fetched from CrossRef and Datacite.</div>
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<div *ngIf ="duplicateIds.length > 0" >{{duplicateIds.length}} duplicate DOIs.</div>
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<div *ngIf = "notFoundIds.length > 0" >Couldn't be found:
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<ul class="">
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<li *ngFor="let id of notFoundIds">"{{id}}"</li>
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</ul>
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</div>
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<div *ngIf = "noValidIds.length > 0" >No valid DOIs:
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<ul class="">
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<li *ngFor="let id of noValidIds">"{{id}}"</li>
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</ul>
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</div>
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<div *ngIf = "allIds.length == 0 || foundIds.length == 0" > Please make sure you are using the right format for the csv file... </div>
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</div>
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<div *ngIf="errorMessage.length > 0 " class="uk-alert uk-alert-danger" role="alert">{{errorMessage}}</div>
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<modal-loading [message]= "'Uploading, reading and fetching results from your document. Please give us a moment..'"></modal-loading>
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</form>
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</div>
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`
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})
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//[(ngModel)]="date"
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export class BulkClaimComponent {
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filesToUpload: Array<File>;
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navigateTo: string = "Search";
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source: string = "crossref";
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type : string = "publication";
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resultsFromSearch:number;
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@Input() public select:boolean = true ;
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@Input() public results;
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@Input() public properties:EnvProperties;
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allIds:string[] = [];
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foundIds:string[] = [];
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duplicateIds:string[] = [];
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notFoundIds:string[] = [];
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noValidIds:string[] = [];
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showReport:boolean = false;
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showInfo :boolean = false;
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@ViewChild (ModalLoading) loading : ModalLoading ;
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errorMessage = "";
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infoMEssage = "";
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enableUpload:boolean = true;
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constructor(private _searchCrossrefService: SearchCrossrefService, private _searchDataciteService: SearchDataciteService) {
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this.filesToUpload = [];
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}
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ngOnInit() {}
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upload() {
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this.enableUpload = false;
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this.showReport = false;
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this.errorMessage = "";
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if(this.filesToUpload.length == 0){
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this.errorMessage = "There is no selected file to upload.";
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return ;
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}
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this.loading.open();
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this.makeFileRequest(this.properties.uploadService, [], this.filesToUpload).then((result) => {
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var rows = (result as any).split('\n'); // I have used space, you can use any thing.
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var i = 0;
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this.duplicateIds = [];
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this.allIds = [];
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this.foundIds = [];
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this.noValidIds = [];
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this.results.slice(0,this.results.length);
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this.notFoundIds = [];
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for(i=0;i<rows.length;i++){
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if(rows[i] && rows[i] != null ){
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console.log("Row is:" + rows[i]);
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var values = rows[i].split(',');
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var id=this.removeDoubleQuotes(values[0]);
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if(DOI.isValidDOI(id)){
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var accessMode = (values[1] != undefined) ? this.removeDoubleQuotes(values[1]):"OPEN";
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accessMode = (this.validateAccessMode(accessMode)?accessMode:"OPEN");
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var embargoDate =(values[2] != undefined) ? this.removeDoubleQuotes(values[2]):Dates.getDateToday();
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embargoDate = (Dates.isValidDate(embargoDate)?embargoDate:Dates.getDateToday());
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if(this.allIds.indexOf(id)>-1){
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this.duplicateIds.push(id);
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}else{
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this.allIds.push(id);
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this.fetchResult(id,accessMode,embargoDate);
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}
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}else{
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this.noValidIds.push(id);
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}
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}
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}
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}, (error) => {
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this.enableUpload = true;
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console.log(error);
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this.loading.close();
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this.errorMessage = "An error occured while uploading...";
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});
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}
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private removeDoubleQuotes(value){
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if(value.indexOf('"')== 0){
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value = value.substring(1,value.length);
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}
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var index =+value.indexOf('"');
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if(index == (value.length - 1) || index == (value.length - 2) ){
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value = value.substring(0,index);
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}
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return value;
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}
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private validateAccessMode(value){
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var accessModes = ["OPEN", "CLOSED", "EMBARGO"];
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if(accessModes.indexOf(value) > -1){
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return true;
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}
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return false;
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}
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fileChangeEvent(fileInput: any){
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this.filesToUpload = <Array<File>> fileInput.target.files;
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}
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makeFileRequest(url: string, params: Array<string>, files: Array<File>) {
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return new Promise((resolve, reject) => {
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var formData: any = new FormData();
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var xhr = new XMLHttpRequest();
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for(var i = 0; i < files.length; i++) {
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formData.append("uploads[]", files[i], files[i].name);
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}
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xhr.onreadystatechange = function () {
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if (xhr.readyState == 4) {
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if (xhr.status == 200) {
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resolve(xhr.response);
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} else {
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reject(xhr.response);
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}
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}
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}
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xhr.open("POST", url, true);
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xhr.send(formData);
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});
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}
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fetchResult(id:string,accessMode:string,date:string){
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this._searchCrossrefService.searchCrossrefByDOIs([id], this.properties.searchCrossrefAPIURL).subscribe(
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data => {
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var crossrefResult = data.items[0];
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if(data.items.length > 0){
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this.foundIds.push(id);
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var result: ClaimResult = ClaimResult.generateResult(crossrefResult, id,"crossref","publication", crossrefResult.URL, crossrefResult.title, crossrefResult.created['date-time'], accessMode);
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result.embargoEndDate = date;
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this.results.push(result);
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this.endOfFetching();
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}else{
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this.searchInDatacite(id,accessMode,date);
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// this.notFoundIds.push(id);
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}
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},
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err => {
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console.log(err);
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this.notFoundIds.push(id);
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this.endOfFetching();
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}
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);
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}
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searchInDatacite(id:string,accessMode:string,date:string){
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this._searchDataciteService.getDataciteResultByDOI(id,this.properties).subscribe(
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item => {
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var dataciteResult = item.data;
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if(dataciteResult != null && dataciteResult.attributes!= null ){
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this.foundIds.push(id);
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var result: ClaimResult = ClaimResult.generateResult(dataciteResult, id,"datacite","dataset", 'http://dx.doi.org/'+dataciteResult.attributes.doi, dataciteResult.attributes.title, dataciteResult.attributes.published, accessMode);
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result.embargoEndDate = date;
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this.results.push(result);
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}else{
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this.notFoundIds.push(id);
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}
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this.endOfFetching();
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},
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err => {
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console.log(err);
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this.notFoundIds.push(id);
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this.endOfFetching();
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}
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);
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}
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endOfFetching(){
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if(this.allIds.length == this.foundIds.length+this.notFoundIds.length+ this.duplicateIds.length ){
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this.showReport = true;
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this.enableUpload = true;
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this.loading.close();
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}
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}
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}
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