openaire-library/claims/linking/bulkClaim/bulkClaim.component.ts

import {Component, Input, Output, EventEmitter,ViewChild} from '@angular/core';
import {Observable}       from 'rxjs/Observable';
import {SearchCrossrefService} from '../../claim-utils/service/searchCrossref.service';
import {SearchDataciteService} from '../../claim-utils/service/searchDatacite.service';

import {ModalLoading} from '../../../utils/modal/loading.component';
import {Dates, DOI} from '../../../utils/string-utils.class';
import {ClaimResult} from '../../claim-utils/claimEntities.class';
import{EnvProperties} from '../../../utils/properties/env-properties';


@Component({
    selector: 'bulk-claim',
    template: `
    <div class="uk-animation  " style=" ">
      <form class=" uk-padding uk-padding-medium uk-padding-remove-left uk-margin-left uk-margin-small-top ">

      <div class="uk-grid">
        <div class="uk-width-expand">
          <div class="uk-text-lead">Upload a DOI csv file <helper  div="link-result-bulk" tooltip=true ></helper></div>
          <!--h3 for="exampleInputFile">Or upload a DOI csv file:</h3-->
          <label for="exampleInputFile">Select a file: </label>
          <div class="js-upload" uk-form-custom>
            <input id="exampleInputFile" class="uk-width-medium" type="file"  (change)="fileChangeEvent($event)"/>
            <button class="uk-button  portal-button" type="button" tabindex="-1" [class.disabled]="!enableUpload" ><span class="uk-margin-small-right uk-icon"  >
            <svg width="20" height="20" viewBox="0 0 20 20" xmlns="http://www.w3.org/2000/svg"> <polyline fill="none" stroke="#000" points="5 8 9.5 3.5 14 8 "></polyline> <rect x="3" y="17" width="13" height="1"></rect>
             <line fill="none" stroke="#000" x1="9.5" y1="15" x2="9.5" y2="4"></line></svg></span> Select</button>
            <!--button class="uk-button uk-button-small" [class.disabled]="!enableUpload" type="button" (click)="upload()">Upload</button-->
        </div>
          <div *ngIf="showReport"  uk-alert  class="uk-alert uk-alert-primary" role="alert" >
            <a class="uk-alert-close" uk-close></a>
            <div>Uploaded file contains {{allIds.length}} {{((allIds.length==1)?'DOI':'DOIs')}}.
              <span *ngIf="allIds.length > 0">{{foundIds.length}} {{((foundIds.length==1)?'result was':'results were')}} succefully  fetched from CrossRef and Datacite.</span>
            </div>
            <div *ngIf ="duplicateIds.length > 0"  >{{duplicateIds.length | number}} duplicate DOIs in {{((duplicateIds.length==1)?'line':'lines')}} {{duplicateIdsRow}}.</div>
            <div *ngIf = "notFoundIds.length > 0"   >Couldn't be found:
              <ul class="">
                <li *ngFor="let id of notFoundIds; let i = index">"{{id}}" in line {{notFoundIdsRow[i]}}</li>
               </ul>
            </div>
            <div *ngIf = "noValidIds.length > 0"   >No valid DOIs:
              <ul class="">
                <li *ngFor="let id of noValidIds; let i = index">"{{id}}" in line {{noValidIdsRow[i]}}</li>
               </ul>
            </div>
            <div *ngIf = "allIds.length == 0 || foundIds.length == 0"   > Please make sure that the uploaded file, is a csv file with the proper format. </div>

          </div>
          <div *ngIf="errorMessage.length > 0 " class="uk-alert uk-alert-danger" role="alert">{{errorMessage}}</div>
          <modal-loading [message]= "'Uploading, reading your documet and fetching results. Please give us a moment..'"></modal-loading>
        </div>
        <!--helper  div="link-result-bulk" ></helper-->
      </div>
    </form>



</div>
    `

})
//[(ngModel)]="date"
export class BulkClaimComponent {
  filesToUpload: Array<File>;
  navigateTo: string = "Search";
  source: string = "crossref";
  type : string = "publication";
  resultsFromSearch:number;
  @Input() public select:boolean = true ;
  @Input() public results;
  @Input() public properties:EnvProperties;

  allIds:string[] = [];
  foundIds:string[] = [];
  duplicateIds:string[] = [];
  duplicateIdsRow:number[] = [];
  notFoundIds:string[] = [];
  notFoundIdsRow:number[] = [];
  noValidIds:string[] = [];
  noValidIdsRow:number[] = [];
  showReport:boolean = false;
  showInfo :boolean = false;
  @ViewChild (ModalLoading) loading : ModalLoading ;
  errorMessage = "";
  infoMEssage = "";
  enableUpload:boolean = true;
  @Input() localStoragePrefix:string="";

  constructor(private _searchCrossrefService: SearchCrossrefService, private _searchDataciteService: SearchDataciteService) {
      this.filesToUpload = [];
  }
  ngOnInit() {}

  upload() {
    this.enableUpload = false;
    this.showReport = false;
    this.errorMessage = "";
    if(this.filesToUpload.length == 0){
      this.errorMessage = "There is no selected file to upload.";
      return ;
    }else{
       if(this.filesToUpload[0].name.indexOf(".csv") == -1 || this.filesToUpload[0].type != "text/csv"){
        this.errorMessage = "No valid file type. The required type is CSV";
        return ;
      }
    }
    this.loading.open();

    this.makeFileRequest(this.properties.uploadService, [], this.filesToUpload).then((result) => {
          var rows = (result as any).split('\n');  // I have used space, you can use any thing.
          console.log("Rows:" + rows.length);
          var i = 0;
          var invalid_rows = 0;
          this.duplicateIds = [];
          this.allIds = [];
          this.foundIds = [];
          this.noValidIds = [];
          this.results.slice(0,this.results.length);
          this.notFoundIds = [];
          var limit = 100;
          for(i=0;i<((rows.length>limit)?limit:rows.length);i++){
            if(rows[i] && rows[i] != null ){
              console.log("Row is:" + rows[i]);
              var values = rows[i].split(',');

              var id=this.removeDoubleQuotes(values[0]);
              if(DOI.isValidDOI(id)){
                var accessMode = (values[1] != undefined) ? this.removeDoubleQuotes(values[1]):"OPEN";
                accessMode = (this.validateAccessMode(accessMode)?accessMode:"OPEN");
                var embargoDate =(values[2] != undefined) ? this.removeDoubleQuotes(values[2]):Dates.getDateToday();
                embargoDate = (Dates.isValidDate(embargoDate)?embargoDate:Dates.getDateToday());
                if(this.allIds.indexOf(id)>-1){
                  this.duplicateIds.push(id);
                  this.duplicateIdsRow.push(i+1);
                }else{
                  this.allIds.push(id);
                  this.fetchResult(id,accessMode,embargoDate,i+1);
                }
             }else{
               this.noValidIds.push(id);
               this.noValidIdsRow.push(i+1);
             }
           }else{
             invalid_rows++;
           }

         }
         if(rows.length == 0 || rows.length == invalid_rows || rows.length == (invalid_rows + this.noValidIds.length)){
           this.endOfFetching();
         }

       }, (error) => {
         this.enableUpload = true;
          console.log(error);
          this.loading.close();
          this.errorMessage = "An error occured while uploading...";
      });
  }
  private removeDoubleQuotes(value){
     if(value.indexOf('"')== 0){
        value = value.substring(1,value.length);
      }
      var index =+value.indexOf('"');
      if(index == (value.length - 1) || index == (value.length - 2) ){
        value = value.substring(0,index);
      }
      return value;
  }
  private validateAccessMode(value){
    var accessModes = ["OPEN", "CLOSED", "EMBARGO"];
     if(accessModes.indexOf(value) > -1){
        return true;
      }

      return false;
  }

  fileChangeEvent(fileInput: any){
      this.filesToUpload = <Array<File>> fileInput.target.files;
      this.upload();
  }

  makeFileRequest(url: string, params: Array<string>, files: Array<File>) {
      return new Promise((resolve, reject) => {
          var formData: any = new FormData();
          var xhr = new XMLHttpRequest();
          for(var i = 0; i < files.length; i++) {
              formData.append("uploads[]", files[i], files[i].name);
          }
          xhr.onreadystatechange = function () {
              if (xhr.readyState == 4) {
                  if (xhr.status == 200) {
                      resolve(xhr.response);
                  } else {
                      reject(xhr.response);
                  }
              }
          }
          xhr.open("POST", url, true);
          xhr.send(formData);
      });
  }

  fetchResult(id:string,accessMode:string,date:string, row:number){
        this._searchCrossrefService.searchCrossrefByDOIs([id], this.properties.searchCrossrefAPIURL, true).subscribe(
          data => {

            var result = data[0];
            if(data.length > 0){
              this.foundIds.push(id);
              result.embargoEndDate = date;
              this.results.push(result);
              this.endOfFetching();
            }else{
              this.searchInDatacite(id,accessMode,date, row);
              // this.notFoundIds.push(id);
            }
           },
          err => {
            console.log(err);
            this.notFoundIds.push(id);
            this.notFoundIdsRow.push(row);
            this.endOfFetching();
          }
        );
  }
  searchInDatacite(id:string,accessMode:string,date:string, row:number){
        this._searchDataciteService.getDataciteResultByDOI(id,this.properties,true).subscribe(
          items => {

            if(items.length > 0){
              var result = items[0];

              this.foundIds.push(id);
              result.embargoEndDate = date;
              this.results.push(result);
            }else{
              this.notFoundIds.push(id);
              this.notFoundIdsRow.push(row);
            }
            this.endOfFetching();
           },
          err => {
            console.log(err);
            this.notFoundIds.push(id);
            this.notFoundIdsRow.push(row);
            this.endOfFetching();
          }
        );
  }
  endOfFetching(){
    if(this.allIds.length == this.foundIds.length+this.notFoundIds.length){
      this.showReport = true;
      this.enableUpload = true;
      this.loading.close();
      if(this.results != null){
            localStorage.setItem(this.localStoragePrefix + "results", JSON.stringify(this.results));
          }
    }

  }
}