explore-services/services/sitemaps/extractUrlsFromSearch.ts

'use strict';

import {properties} from "../../explore/src/environments/environment";
import {SearchResearchResultsService} from "../../explore/src/app/openaireLibrary/services/searchResearchResults.service";
import {ResultPreview} from "../../explore/src/app/openaireLibrary/utils/result-preview/result-preview";

import {Identifier} from "../../explore/src/app/openaireLibrary/utils/string-utils.class";
import {SearchFields} from "../../explore/src/app/openaireLibrary/utils/properties/searchFields";
import {ContextsService} from "../../explore/src/app/openaireLibrary/claims/claim-utils/service/contexts.service";
import {ResultLandingComponent} from "../../explore/src/app/openaireLibrary/landingPages/result/resultLanding.component";
import {ResultLandingService} from "../../explore/src/app/openaireLibrary/landingPages/result/resultLanding.service";
import {ResultLandingInfo} from "../../explore/src/app/openaireLibrary/utils/entities/resultLandingInfo";

const request = require('superagent');

function getForSubject(resultsPerUrl, resultsType, subject) {
  setTimeout(async () => {
    let allUrls = new Set();

    let reqSubject: string = subjectMapping[subject];
    if (reqSubject == null) {
      reqSubject = subject;
    }

    let url = resultsUrlPrefix + "&query=(" + "resultsubject exact" + " \"" + encodeURIComponent(reqSubject) + "\")" + "&type=" + resultsType;

    let totalResults: number = 150000;
    await new Promise((resolve, reject) => {
      request.get(url+"&size=0&page=0", function (err: any, response: any) {
        if (!response && err) {
          reject(err);
        } else {
          totalResults = response.body['meta']['total'];
          resolve(value => value);
        }
      })
    }).catch(error => {
      console.error("Error getting results ", error);
      fs.appendFileSync("./" + errorFileName, "no response  " + url + "  ");
      fs.appendFileSync("./" + errorFileName, error);
      fs.appendFileSync("./" + errorFileName, "\n");
    })

    let pages: number = Math.ceil(totalResults/resultsPerUrl);
    console.log("totalResults="+totalResults + " - pages="+pages);
    for(let page=0; page<pages; page++) {
      await new Promise(resolve => setTimeout(resolve, 500));

      promiseArray.push(
        new Promise((resolve, reject) => {
          request.get(url+"&size="+resultsPerUrl+"&page="+page, function (err: any, response: any) {
            if (!response && err) {
              reject(err);
            } else {
              parseAllUrls(response, allUrls, resultsType, subject);
              resolve(value => value);
            }
          })
        }).catch(error => {
          console.error("Error getting results ", error);
          fs.appendFileSync("./" + errorFileName, "no response  " + url + "  ");
          fs.appendFileSync("./" + errorFileName, error);
          fs.appendFileSync("./" + errorFileName, "\n");
        })
      );
    }

    finalize(resultsPerUrl, resultsType);
  });
}

function get(resultsPerUrl, resultsType) {
  setTimeout(() => {
    let searchFields = new SearchFields();
    let fieldIdsMap = searchFields.RESULT_FIELDS;

    refineUrl += resultsType;

    request.get(refineUrl, async function (err: any, refineResponse: any) {
      if (!refineResponse && err) {
        console.error("Error getting refine filters ",err);
      } else {
        let keys = refineResponse.body['refineResults'] ? Object.keys(refineResponse.body['refineResults']) : null;
        console.log("number of keys: " + (keys? keys.length : 'error: no refine results returned'));

        let allUrls = new Set();

        for (let key of keys) {
          // comment out for communities query check
          if(key == "community") {
            await communitiesPromise;
          }
          console.log("key: "+key+", number of values: " + refineResponse.body['refineResults'][key].length);

          for (let value of refineResponse.body['refineResults'][key]) {
            if(!value || !value.name || !value.id
              || value.name.toLowerCase().includes('unknown') || value.name.toLowerCase().includes('not available')
              || value.name == "unidentified" || value.name == "Undetermined") {
              console.log("filtered out: "+(value ? ("name: "+value.name + " - id: "+value.id) : value));
              continue;
            }

            if(key=="community") {
              let valueId = "";
              if(value.id) {
                let idArray = value.id.split("||");
                if(idArray) {
                  valueId = idArray[0];
                }
              }
              // if(!valueId) {
              if(!valueId || !publicCommunities.includes(valueId)) { // comment out for communities query check
                console.log("hidden community: "+valueId);
                continue;
              }
            }

            const url = resultsUrlPrefix + "&fq=" + key + " " + fieldIdsMap[key].equalityOperator + " \"" + encodeURIComponent(value.id) + "\"" + "&type=" + resultsType + "&page=0&size=" + resultsPerUrl;

            await new Promise(resolve => setTimeout(resolve, 500));
            promiseArray.push(
              new Promise((resolve, reject) => {
              request.get(url, function (err: any, response: any) {
                if (!response && err) {
                  reject(err);
                } else {
                  parseAllUrls(response, allUrls, resultsType);
                  resolve(value => value);
                }
              })
            }).catch(error => {
              console.error("Error getting results ", error);
              fs.appendFileSync("./"+errorFileName, "no response  "+url+"  ");
              fs.appendFileSync("./"+errorFileName, error);
              fs.appendFileSync("./"+errorFileName, "\n");
            }));
          }
          console.log("");
        }

        finalize(resultsPerUrl, resultsType);
      }
    })
  })
}
// });

async function finalize(resultsPerUrl, resultsType) {
  await Promise.all(promiseArray);
  console.log("\nDuplicate urls: " + alreadyin + " vs unique urls: " + notin);
  console.log("\nNo indexed urls: " + noIndexedUrls + " vs final urls: " + finalUrls);
  console.log("\nPublications: " + publications + " - Datasets: " + datasets +
    " - Software: " + software + " - Other: " + other + " --- urls with pid: " + urlsWithPid);

  fs.appendFile("./" + fileName, "\n</urlset>", function (err) {
    if (err) {
      return console.log("Error appending in file " + fileName + ": ", err);
    }
    console.timeEnd("total_time (" + resultsPerUrl + " " + resultsType + " per request)");
  });
}

function parseAllUrls_old(response: any, allUrls: any) {
  // let allUrls: any = [];

  let responses: any = response.body['results'];
  let searchResearchResultsService: any = new SearchResearchResultsService();

  // if(responses) {
  //   let length = Array.isArray(responses) ? responses.length : 1;
  //   for (let i = 0; i < length; i++) {
  //     let resData = Array.isArray(responses) ? responses[i]['result']['metadata']['oaf:entity']['oaf:result'] : responses['result']['metadata']['oaf:entity']['oaf:result'];
  //
  //     if (resData['pid']) {
  //       if (!Array.isArray(resData['pid'])) {
  //         if (resData['pid'].classid && resData['pid'].classid == 'doi') {
  //           if (resData['pid'].content != '' && resData['pid'].content != null) {
  //             console.log("|"+resData['pid'].content+"|   "+(typeof resData['pid'].content));
  //             resData['pid'].content.replace("https://doi.org/", "");
  //           }
  //         }
  //       }
  //     }
  //   }
  // }


  let searchResults: any = searchResearchResultsService.parseResults("result", responses, properties);
  if(searchResults.length < 100 && searchResults.length > 0) {
    console.log("num of results: "+searchResults.length + "   " + response.request.url);
  }

  if(searchResults.length == 0) {
    fs.appendFileSync("./"+errorFileName, response.statusCode+"  "+response.request.url+"\n");
  }
  for(let j=0; j<searchResults.length; j++) {
    let resultPreview: any = ResultPreview.searchResultConvert(searchResults[j], searchResults[j].entityType);

    let pid: any = Identifier.getPIDFromIdentifiers(resultPreview.identifiers);
    let url;
    if(pid && pid.id) {
      url = getUrlByType(resultPreview.resultType, pid, encodeURIComponent(pid.id));
    } else {
      url = getUrlByType(resultPreview.resultType, null, resultPreview.id);
    }
    if(allUrls.has(url)) {
      alreadyin++;
    } else {
      allUrls.add(url);
      let urlPre = "\n<url><loc>";
      let urlSuf = "</loc></url>";
      fs.appendFileSync("./"+fileName, urlPre + url + urlSuf);
      notin++;
    }
  }
  return allUrls;
}


function parseAllUrls(response: any, allUrls: any, resultsType: string, subject: string = null) {
  // let allUrls: any = [];

  let responses: any = response.body['results'];
  let length = responses ? (Array.isArray(responses) ? responses.length : 1) : 0;

  if(length < 100 && length > 0) {
    console.log("num of results: "+length + "   " + response.request.url);
  }

  if(length == 0) {
    fs.appendFileSync("./"+errorFileName, response.statusCode+"  "+response.request.url+"\n");
  }

  for (let i = 0; i < length; i++) {
    let curResponse = Array.isArray(responses) ? responses[i] : responses;
    let resData = curResponse['result']['metadata']['oaf:entity'];

    let param = [resData['oaf:result'], resData['oaf:result']['title'], resData['oaf:result']['rels']['rel'],
                 resData['oaf:result']['children'], resData['oaf:result']['pid'], resData['oaf:result']['journal'],
                 resData['oaf:result']['language'], resData['oaf:result']['subject'], resData['oaf:result']['context'],
                 resData['oaf:result']['creator'], resData['oaf:result']['country'], resData['oaf:result']['programmingLanguage'],
                 (resData['extraInfo'] !== undefined && resData['extraInfo']['citations'] !== undefined)
                   ? resData['extraInfo']['citations']['citation'] : null,
                 curResponse['result']['header']['dri:status'], curResponse];

    let resultLandingService = new ResultLandingService(null);
    let resultLandingInfo: ResultLandingInfo = resultLandingService.parseResultLandingInfo(param, null, properties);

    let resultPreview: any = ResultPreview.resultLandingInfoConvert(resultLandingInfo, resultLandingInfo.resultType);

    let pid: any = Identifier.getPIDFromIdentifiers(resultPreview.identifiers);
    let url;
    if(pid && pid.id) {
      url = getUrlByType(resultPreview.resultType, pid, encodeURIComponent(pid.id));
    } else {
      url = getUrlByType(resultPreview.resultType, null, resultLandingInfo.relcanId);
    }
    if(allUrls.has(url)) {
      alreadyin++;
    } else {
      let resultLandingComponent = new ResultLandingComponent(null, null, null,
        null, null, null, null, null, null,
        null, null, null, null, null);

      if(!resultLandingComponent.checkIfAllowed(resultLandingInfo)) {
        noIndexedUrls++;
        fs.appendFileSync("./"+noIndexFileName, url+"\n");
      } else {
        if(finalUrls > 0 && ((finalUrls % 50000) == 0)) {
          console.log("url to be added in file: "+url);
          fs.appendFileSync("./" + fileName, "\n</urlset>");
          console.log("\n");
          createSitemapFile(resultsType, subject);
        }

        finalUrls++;
        let urlPre = "\n<url><loc>";
        let urlSuf = "</loc></url>";
        fs.appendFileSync("./"+fileName, urlPre + url + urlSuf);
      }

      allUrls.add(url);
      notin++;
    }

  // .pipe(map(res => [res['result']['header']['dri:status'], res['result']['metadata']['oaf:entity'], res]))
  //     .pipe(map(res => [
  //       res[1]['oaf:result'],                 // 0
  //       res[1]['oaf:result']['title'],        // 1
  //       res[1]['oaf:result']['rels']['rel'],  // 2
  //       res[1]['oaf:result']['children'],     // 3
  //       res[1]['oaf:result']['pid'],          // 4
  //       res[1]['oaf:result']['journal'],      // 5
  //       res[1]['oaf:result']['language'],     // 6
  //       res[1]['oaf:result']['subject'],      // 7
  //       res[1]['oaf:result']['context'],      // 8
  //       res[1]['oaf:result']['creator'],      // 9
  //       res[1]['oaf:result']['country'] ,     // 10
  //       res[1]['oaf:result']['programmingLanguage'],              // 11 - software
  //       //res[1]['oaf:result']['resulttype'],
  //       (res[1]['extraInfo'] !== undefined && res[1]['extraInfo']['citations'] !== undefined)
  //         ? res[1]['extraInfo']['citations']['citation'] : null,  // 12
  //       res[0],                               // 13
  //       res[2]                                // 14
  //     ]))
  //     .pipe(map(res => this.parseResultLandingInfo(res, provenanceActionVocabulary, properties)));

  }

  return allUrls;
}


// function parseAllUrls1(response) {
//   let allUrls = [];
//
//   let responses = response.body['results'];
//   let length = Array.isArray(responses) ? responses.length : 1;
//
//   for (let i = 0; i < length; i++) {
//     let p = new parsingFunctions.ParsingFunctions();
//     let resData = Array.isArray(responses) ? responses[i]['result']['metadata']['oaf:entity']['oaf:result'] : responses['result']['metadata']['oaf:entity']['oaf:result'];
//
//     let type = "result";
//     if (resData['resulttype']) {
//       type = resData['resulttype']['classname'];
//     }
//
//     if (resData['pid']) {
//       let identifiers = p.parseIdentifiers(resData['pid']);
//       let pid = string_utils.Identifier.getPIDFromIdentifiers(identifiers);
//
//       if(pid && pid.id) {
//         allUrls[i] = getUrlByType(type, pid, pid.id);
//       } else {
//         let canId = parsingFunctions.ParsingFunctions.parseRelCanonicalId(Array.isArray(responses) ? responses[i] : responses, "result");
//         allUrls[i] = getUrlByType(type, null, canId);
//       }
//     } else {
//       let canId = parsingFunctions.ParsingFunctions.parseRelCanonicalId(Array.isArray(responses) ? responses[i] : responses, "result");
//       allUrls[i] = getUrlByType(type, null, canId);
//     }
//   }
//   return allUrls;
// }
//
function getUrlByType(type: any, pid: any, id: any) {
  let parameter: any = "";

  if (type === "publication") {
    publications++;
    parameter = "articleId";
  } else if (type === "dataset") {
    datasets++;
    parameter = "datasetId";
  } else if (type === "software") {
    software++;
    parameter = "softwareId";
  } else if (type === "other") {
    other++;
    parameter = "orpId";
  } else {
    parameter = "id";
  }
  if(pid) {
    urlsWithPid++;
    parameter = "pid";
  }
  return landingPrefix+type+"?"+parameter+"="+id;
}

// comment out for communities query check
function getCommunities() {
  communitiesPromise = new Promise((resolve, reject) => {
    request.get(contextUrl, async function (err: any, communitiesResponse: any) {
      if (!communitiesResponse && err) {
        reject(err);
      } else {
        const contextsService = new ContextsService();
        publicCommunities = contextsService.parseCommunities(communitiesResponse.body, false).map(value => value.id);
        resolve(value => value);
      }
    })
  }).catch(error => console.error("Error getting communities ", error));
}

function buildSiteMap(resultsPerUrl, resultsType, subject = null) {
  console.time("total_time (" + resultsPerUrl + " " + resultsType + " per request)");

  let date = new Date();
  createSitemapFile(resultsType, subject);
  errorFileName = resultsType + (subject ? "_"+subject.replace(/\s/g, "") : "") + "_error_" + date.getFullYear() + "_" + (date.getMonth() + 1) + "_" + date.getDate() + ".txt";//+"_"+date.getTime();
  noIndexFileName = resultsType + (subject ? "_"+subject.replace(/\s/g, "") : "") + "_noIndex_" + date.getFullYear() + "_" + (date.getMonth() + 1) + "_" + date.getDate() + ".txt";//+"_"+date.getTime();

  if(subject) {
    getForSubject(resultsPerUrl, resultsType, subject);
  } else {
    getCommunities();  // comment out for communities query check
    get(resultsPerUrl, resultsType);
  }
}

async function createSitemapFile(resultsType, subject=null) {
  // let date = new Date();
  fileName = resultsType + (subject ? "_"+subject.replace(/\s/g, "") : "") + "_sitemap" + (filesCreated > 0 ? filesCreated : "")
    // + "_" + date.getFullYear() + "_" + (date.getMonth() + 1) + "_" + date.getDate()
    + ".xml";//+"_"+date.getTime();
  filesCreated++;

  console.log("Buiding sitemap in file: " + fileName + "\n");

  let sitemap = "<?xml version=\"1.0\" encoding=\"UTF-8\"?>\n" + "<urlset xmlns=\"http://www.sitemaps.org/schemas/sitemap/0.9\">";
  fs.writeFileSync("./" + fileName, sitemap);
}

function askQuestion(query) {
  const readline = require('readline');

  const rl = readline.createInterface({
    input: process.stdin,
    output: process.stdout,
  });

  return new Promise(resolve => rl.question(query, ans => {
    rl.close();
    resolve(ans);
  }))
}

async function start(resultsType, subject = null) {
  if(resultsType == null) {
    resultsType = await askQuestion("Please provide type of results (publications, datasets, software, other): ");
  }
  console.log("type is: " + resultsType);

  if(subject == null) {
    subject = await askQuestion("Please provide subject. " +
      "Available subjects are \"Physics::Atomic Physics\" or physics, \"Mathematics::Combinatorics\" or mathematics, " +
      "any other subject you want or no value if no subject: ");
    if(!subject) {
      subject = null;
    }
  }
  console.log("subject is: " + subject);

  buildSiteMap(200, resultsType, subject);
}

let filesCreated = 0;
let fileName;
let errorFileName;
let noIndexFileName;
const fs = require('fs');

let promiseArray = [];
let alreadyin = 0;  // duplicate urls
let notin= 0;
let finalUrls = 0;
let noIndexedUrls = 0;
let urlsWithPid = 0;
let publications = 0;
let datasets = 0;
let software = 0;
let other = 0;

// comment out for communities query check
let communitiesPromise;
let publicCommunities = [];


const resultsUrlPrefix = "https://services.openaire.eu/search/v2/api/resources2/?format=json";
const landingPrefix = "https://explore.openaire.eu/search/";
// let refineUrl = "https://services.openaire.eu/search/v2/api/resources2/?format=json&refine=true&fields=resultbestaccessright&fields=relfunder&fields=instancetypename&fields=resultlanguagename&fields=resulthostingdatasource&fields=country&page=0&size=0&type=";

// comment out for communities query check
let refineUrl = "https://services.openaire.eu/search/v2/api/resources2/?format=json&refine=true&fields=resultbestaccessright&fields=relfunder&fields=instancetypename&fields=resultlanguagename&fields=community&fields=resulthostingdatasource&fields=country&page=0&size=0&type=";
const contextUrl = "https://services.openaire.eu/openaire/contexts/";

const subjectMapping = {"physics": "Physics::Atomic Physics", "mathematics": "Mathematics::Combinatorics"}

// process.argc[3] is the "resultType" argument, process.argc[4] is the "subject" argument
start(process.argv[3], process.argv[4]);