99 lines
7.4 KiB
XML
99 lines
7.4 KiB
XML
<record>
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<result xmlns:dri="http://www.driver-repository.eu/namespace/dri"
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xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance">
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<header>
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<dri:objIdentifier>doi_________::9cb0664d4c891c4baaf73f007c0c9de0</dri:objIdentifier>
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<dri:dateOfCollection>2022-11-25T12:55:13Z</dri:dateOfCollection>
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<dri:status>under curation</dri:status>
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<counters />
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</header>
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<metadata>
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<oaf:entity xmlns:oaf="http://namespace.openaire.eu/oaf"
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xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
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xsi:schemaLocation="http://namespace.openaire.eu/oaf http://namespace.openaire.eu/oaf http://www.openaire.eu/schema/0.2/oaf-0.2.xsd">
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<oaf:result>
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<title classid="main title" classname="main title" schemeid="dnet:dataCite_title" schemename="dnet:dataCite_title">COVID-19 Knowledge Graph: A semantic resource embedding biological and chemical entities</title>
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<creator rank="1" name="" surname="">Karki, Reagon</creator>
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<dateofacceptance />
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<resulttype classid="software" classname="software" schemeid="dnet:result_typologies" schemename="dnet:result_typologies" />
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<language classid="" classname="" schemeid="dnet:languages" schemename="dnet:languages" />
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<description><p>A Knowledge graph representation of compounds and associated biological entities in the BY-COVID and EOSC Future project.</p> <p><strong>Current status</strong></p> <ul> <li>Number of Nodes: 35952</li> <li>Number of Edges: 279462</li> <li>Human Proteins: 1347</li> <li>Assay: 15835</li> <li>Chemical/Compound: 4096</li> <li>Mechanism of Action: 739</li> <li>Pathway: 1513</li> <li>Disease: 1585</li> <li>SideEffect: 7420</li> <li>Biological Process: 2085</li> <li>Molecular Function: 1332</li> </ul> <p>Please check the BY_COVID_update_August.ipynb for understanding step wise process of KG generation and KG statistics. The KG has been exported to formats such as graphml, sif and so on for visualizations in other platforms. For example, the graphml file can be imported to Cytoscape directly. These files are located in 'data\export' folder.</p> <p></p></description>
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<subject classid="" classname="" schemeid="" schemename="" />
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<relevantdate classid="" classname="" schemeid="" schemename="" />
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<publisher>Zenodo</publisher>
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<embargoenddate />
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<journal issn="" eissn="" lissn="" ep="" iss="" sp="" vol="" />
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<source />
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<fulltext />
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<format />
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<storagedate />
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<resourcetype classid="" classname="" schemeid="" schemename="" />
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<device />
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<size />
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<version />
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<lastmetadataupdate />
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<metadataversionnumber />
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<documentationUrl />
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<codeRepositoryUrl />
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<programmingLanguage classid="" classname="" schemeid="" schemename="" />
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<contactperson />
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<contactgroup />
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<tool />
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<originalId>oai:zenodo.org:7351221</originalId>
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<collectedfrom name="ZENODO" id="opendoar____::358aee4cc897452c00244351e4d91f69" />
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<pid classid="oai" classname="Open Archives Initiative" schemeid="dnet:pid_types" schemename="dnet:pid_types">oai:zenodo.org:7351221</pid>
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<pid classid="doi" classname="Digital Object Identifier" schemeid="dnet:pid_types" schemename="dnet:pid_types">10.5281/zenodo.7351221</pid>
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<bestaccessright classid="OPEN" classname="Open Access" schemeid="dnet:access_modes" schemename="dnet:access_modes" />
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<context id="covid-19" label="COVID-19" type="community"></context>
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<datainfo>
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<inferred>false</inferred>
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<deletedbyinference>false</deletedbyinference>
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<trust>0.9</trust>
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<inferenceprovenance />
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<provenanceaction classid="user:insert" classname="user:insert" schemeid="dnet:provenanceActions" schemename="dnet:provenanceActions" />
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</datainfo>
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<rels>
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<rel inferred="false" trust="0.9" inferenceprovenance="" provenanceaction="user:claim">
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<to class="isProducedBy" scheme="dnet:result_project_relations" type="project">corda__h2020::256485716fdb9f5ca69007b7ca5a072b</to>
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<code>101017536</code>
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<acronym>EOSC Future</acronym>
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<title>EOSC Future</title>
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<contracttype classid="" classname="" schemeid="" schemename="" />
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<funding>
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<funder id="ec__________::EC" shortname="EC" name="European Commission" jurisdiction="" />
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<funding_level_0 name="H2020">ec__________::EC::H2020</funding_level_0>
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</funding>
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<websiteurl />
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</rel>
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<rel inferred="false" trust="0.9" inferenceprovenance="" provenanceaction="user:claim">
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<to class="isProducedBy" scheme="dnet:result_project_relations" type="project">corda__h2020::4a3254eac2997eee0a9dcb7a7daedb81</to>
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<code>101046203</code>
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<acronym>BY-COVID</acronym>
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<title>Beyond COVID</title>
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<contracttype classid="" classname="" schemeid="" schemename="" />
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<funding>
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<funder id="ec__________::EC" shortname="EC" name="European Commission" jurisdiction="" />
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<funding_level_0 name="Horizon Europe Framework Programme - HORIZON-RIA\HORIZON Action Grant Budget-Based">ec__________::EC::Horizon Europe Framework Programme - HORIZON-RIA\HORIZON Action Grant Budget-Based</funding_level_0>
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</funding>
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<websiteurl />
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</rel>
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</rels>
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<children>
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<instance id="od______2659::040cee965a4544e343a2ba149783c3fc">
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<instancetype classid="0029" classname="Software" schemeid="dnet:publication_resource" schemename="dnet:publication_resource" />
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<collectedfrom name="ZENODO" id="opendoar____::358aee4cc897452c00244351e4d91f69" />
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<hostedby name="ZENODO" id="opendoar____::358aee4cc897452c00244351e4d91f69" />
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<accessright classid="OPEN" classname="Open Access" schemeid="dnet:access_modes" schemename="dnet:access_modes" />
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<dateofacceptance />
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<webresource>
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<url>https://zenodo.org/record/7351221</url>
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</webresource>
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</instance>
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</result>
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