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5149 Commits

Author SHA1 Message Date
Claudio Atzori dc3a5858f7 Merge branch 'beta' into beta_provision_relation 2024-05-09 14:14:43 +02:00
Claudio Atzori 55f39f7850 [graph provision] adds the possibility to validate the XML records before storing them via the validateXML parameter 2024-05-09 14:06:04 +02:00
Claudio Atzori 39a2afe8b5 [graph provision] fixed XML serialization of the usage counts measures, renamed workflow actions to better reflect their role 2024-05-09 13:54:42 +02:00
Claudio Atzori 908ed9da7a Merge pull request 'Various fixes in the stats wf' (#430) from antonis.lempesis/dnet-hadoop:beta into beta 
Reviewed-on: #430
 2024-05-08 13:41:02 +02:00
Antonis Lempesis 0cada3cc8f every step is run in the analytics queue. Hardcoded for now, will make a parameter later 2024-05-08 13:42:53 +03:00
Antonis Lempesis 90a4fb3547 fixed typos 2024-05-08 13:17:58 +03:00
Claudio Atzori 18aa323ee9 cleanup unused classes, adjustments in the oozie wf definition 2024-05-08 11:36:46 +02:00
Claudio Atzori b4e3389432 fixed property mapping creating the RelatedEntity transient objects. spark cores & memory adjustments. Code formatting 2024-05-07 16:25:17 +02:00
Giambattista Bloisi 711048ceed PrepareRelationsJob rewritten to use Spark Dataframe API and Windowing functions 2024-05-07 15:44:33 +02:00
Claudio Atzori 26363060ed fixed id prefix creation for the fosnodoi records, again 2024-05-03 15:53:52 +02:00
Claudio Atzori 0486227185 [cleaning] deactivating the cleaning of FOS subjects found in the metadata provided by repositories 2024-05-03 14:31:12 +02:00
Claudio Atzori a5d13d5d27 code formatting 2024-05-03 14:14:34 +02:00
Claudio Atzori e1a0fb8933 fixed id prefix creation for the fosnodoi records 2024-05-03 14:14:18 +02:00
Giambattista Bloisi 69c5efbd8b Fix: when applying enrichments with no instance information the resulting merge entity was generated with no instance instead of keeping the original information 2024-05-03 13:57:56 +02:00
Claudio Atzori 00ad21d814 Merge pull request 'preparations for dhp-common beta release 1.2.5' (#433) from beta-release-1.2.5 into beta 
Reviewed-on: #433
 2024-05-02 11:28:19 +02:00
Claudio Atzori 4355f64810 reverted to version 1.2.5-SNAPSHOT 2024-05-02 11:23:53 +02:00
Claudio Atzori 66680b8b9a refactoring of common utilities 2024-05-02 11:16:58 +02:00
Claudio Atzori dcf23b3d06 Merge branch 'beta' into beta-release-1.2.5 2024-05-02 10:01:49 +02:00
Claudio Atzori 11bd89e132 [enrichment] use sparkExecutorMemory to define also the memoryOverhead 2024-05-01 08:32:59 +02:00
Claudio Atzori e96c2c1606 [ranking wf] set spark.executor.memoryOverhead to fine tune the resource consumption 2024-04-30 16:23:25 +02:00
Claudio Atzori 50c18f7a0b [dedup wf] revised memory settings to address the increased volume of input contents 2024-04-30 12:34:16 +02:00
Claudio Atzori c08a58bba8 Merge pull request 'Miscellaneous related to changes in MergeUtils' (#429) from misc_fixes_merge_entities into beta 
Reviewed-on: #429
 2024-04-24 08:55:37 +02:00
Claudio Atzori e2937db385 Merge branch 'beta' into misc_fixes_merge_entities 2024-04-24 08:55:28 +02:00
Giambattista Bloisi 1878199dae Miscellaneous fixes: 
- in Merge By ID pick by preference those records coming from delegated Authorities
- fix various tests
- close spark session in SparkCreateSimRels
 2024-04-24 08:12:45 +02:00
Lampros Smyrnaios 49af2e5740 Miscellaneous updates to the copying operation to Impala Cluster: 
- Update the algorithm for creating views that depend on other views; overcome some bash-instabilities.
- Upon any error, fail the whole process, not just the current DB-creation, as those errors usually indicate a bug in the initial DB-creation, that should be fixed immediately.
- Enhance parallel-copy of large files by "hadoop distcp" command.
- Reduce the "invalidate metadata" commands to just the current DB's tables, in order to eliminate the general overhead on Impala.
- Show the number of tables and views in the logs.
- Fix some log-messages.
 2024-04-23 17:15:04 +03:00
Antonis Lempesis d2649a1429 increased the jvm ram 2024-04-23 16:03:16 +03:00
Claudio Atzori c3053ef34d using version 1.2.5-beta for the release 2024-04-23 14:52:32 +02:00
Claudio Atzori b5bcab13ec using version 1.2.5-beta for the release 2024-04-23 14:36:39 +02:00
Claudio Atzori 425c9afc36 using version 1.2.5-beta for the release 2024-04-23 14:30:04 +02:00
Claudio Atzori 93dd9cc639 code formatting 2024-04-23 11:28:00 +02:00
Miriam Baglioni 6189879643 [NOAMI] removed entry for Irish Research eLibray (IReL) Care Board from the list of funders. 2024-04-23 11:09:18 +02:00
Claudio Atzori c57cff2d6d Merge pull request '[WebCrawl] adding affiliation relations from web information' (#428) from WebCrowlBeta into beta 
Reviewed-on: #428
 2024-04-23 09:36:15 +02:00
Miriam Baglioni 7de114bda0 [WebCrawl] addressing comments from PR 2024-04-22 13:52:50 +02:00
Claudio Atzori eb4692e4ee Merge branch 'beta' into WebCrowlBeta 2024-04-22 11:40:24 +02:00
Claudio Atzori 24a83fc24f avoid NPEs in common Oaf merge utilities 2024-04-22 11:39:44 +02:00
Miriam Baglioni 776c898c4b [WebCrawl] adding affiliation relations from web information 2024-04-22 11:04:17 +02:00
Claudio Atzori 5857fd38c1 avoid NPEs in common Oaf merge utilities 2024-04-21 08:29:09 +02:00
Claudio Atzori 0656ab2838 code formatting 2024-04-20 08:10:58 +02:00
Claudio Atzori ab7f0855af fixed query reading projects from the aggregator DB 2024-04-20 08:10:32 +02:00
Claudio Atzori 7a7e313157 updated schema version 2024-04-19 17:30:25 +02:00
Claudio Atzori e5879b68c7 [transformative agreement] including reuslt-funder relations to the information imported from the TRs 2024-04-19 17:14:18 +02:00
Claudio Atzori 3a027e97a7 [graph indexing] sets spark memoryOverhead in the join operations to the same value used for the memory executor 2024-04-19 16:59:58 +02:00
Sandro La Bruzzo b72c3139e2 updated Ignore annotation that is deprecated to Disabled 2024-04-19 14:52:40 +02:00
Antonis Lempesis b52a5a753b Merge remote-tracking branch 'upstream/beta' into beta 2024-04-19 15:28:28 +03:00
Antonis Lempesis c3fe9662b2 all indicator tables are now stored as parquet 2024-04-19 12:45:36 +03:00
Claudio Atzori 57c678d904 integrating changes from PR#424 2024-04-18 11:38:35 +02:00
Claudio Atzori 5ab8cd1794 Various fixes for the stats DB update workflow, step16-createIndicatorsTables.sql 2024-04-18 11:28:18 +02:00
Antonis Lempesis 0c71c58df6 fixed the definition of gold_oa 2024-04-18 12:01:27 +03:00
Antonis Lempesis 43d05dbebb fixed the definition of result_country 2024-04-18 11:53:50 +03:00
Antonis Lempesis e728a0897c fixed the definition of indi_pub_bronze_oa 2024-04-18 11:07:55 +03:00