 Miriam Baglioni
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743d31be22
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apply changes in #40 (comment)
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2020-08-13 12:11:22 +02:00 |
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Miriam Baglioni
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65b48df652
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apply changes in #40 (comment)
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2020-08-13 12:11:06 +02:00 |
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Miriam Baglioni
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90b54d3efb
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apply changes in #40 (comment)
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2020-08-13 12:08:24 +02:00 |
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Miriam Baglioni
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69bbb9592a
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apply changes in #40 (comment)
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2020-08-13 12:07:39 +02:00 |
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Miriam Baglioni
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945323299a
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apply changes in #40 (comment)
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2020-08-13 12:07:24 +02:00 |
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Miriam Baglioni
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e04c993247
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apply changes in #40 (comment)
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2020-08-13 12:07:07 +02:00 |
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Miriam Baglioni
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ed0812d0ce
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apply changes in #40 (comment)
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2020-08-13 12:06:49 +02:00 |
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Miriam Baglioni
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d55cfe0ea5
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apply changes in #40 (comment)
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2020-08-13 12:06:20 +02:00 |
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Miriam Baglioni
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80866bec7d
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apply changes in #40 (comment)
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2020-08-13 12:06:05 +02:00 |
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Miriam Baglioni
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1400978c0a
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apply changes in #40 (comment)
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2020-08-13 12:05:44 +02:00 |
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Miriam Baglioni
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7b941a2e0a
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apply changes in #40 (comment)
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2020-08-13 12:05:17 +02:00 |
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Miriam Baglioni
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f7474f50fe
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apply changes in #40 (comment)
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2020-08-13 12:04:52 +02:00 |
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Miriam Baglioni
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367203f412
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apply changes in #40 (comment)
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2020-08-13 12:04:33 +02:00 |
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Miriam Baglioni
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3ab4809d31
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apply changes in #40 (comment)
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2020-08-13 12:04:10 +02:00 |
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Miriam Baglioni
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02a4986e7b
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Applying changed from code reviews #40 (comment) and #40 (comment) and #40 (comment)
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2020-08-13 11:53:01 +02:00 |
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Miriam Baglioni
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235d4e4d6e
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moved Context as relevant for Communities dump
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2020-08-12 18:16:45 +02:00 |
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Miriam Baglioni
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adf9f96a67
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test for extraction of relation between organizations and context
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2020-08-12 10:04:47 +02:00 |
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Miriam Baglioni
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7400cd019d
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removed not needed variable
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2020-08-12 10:03:33 +02:00 |
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Miriam Baglioni
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98d28bab5c
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fixed missing _ in context nsprefix
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2020-08-12 10:00:18 +02:00 |
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Miriam Baglioni
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8f48cb29f4
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changed resource because of a change in the XQuery that returned the XML to be parsed. The main Zenodo community is no more a separate element, but part of the <zenodocommunities> element
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2020-08-11 18:04:38 +02:00 |
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Miriam Baglioni
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c3672b162b
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merge branch with master
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2020-08-11 17:53:04 +02:00 |
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Miriam Baglioni
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a16bbf3202
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changed test resource to mirror change in the Xquery that produced data to be parsed. The main Zenodo community it is no more provided in a different element, but it is part of the <zenodocommunities>
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2020-08-11 17:48:44 +02:00 |
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Miriam Baglioni
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25f4fbceea
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draft of test and resources
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2020-08-11 17:37:22 +02:00 |
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Miriam Baglioni
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30a2b19b65
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changed metadata for deposition od covid-19 dump in Zenodo
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2020-08-11 17:36:56 +02:00 |
 Claudio Atzori
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f7cc52ab02
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Merge pull request 'enrichment_wfs' (#39) from enrichment_wfs into master
LGTM
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2020-08-11 17:26:13 +02:00 |
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Miriam Baglioni
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49788b532a
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changed to mirror changes in the schema
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2020-08-11 16:05:03 +02:00 |
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Miriam Baglioni
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b08511287b
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-
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2020-08-11 16:01:36 +02:00 |
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Miriam Baglioni
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7e81a17068
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changed the XQUERY to mirror the change in the code
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2020-08-11 16:00:33 +02:00 |
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Miriam Baglioni
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37ad2f28e9
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removed added | in prefix for datasource
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2020-08-11 15:55:06 +02:00 |
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Miriam Baglioni
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f31c2e9461
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enabled test
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2020-08-11 15:49:25 +02:00 |
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Miriam Baglioni
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2d67476417
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merge branch with master
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2020-08-11 15:46:04 +02:00 |
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Miriam Baglioni
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77a390878c
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merge upstream
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2020-08-11 15:45:48 +02:00 |
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Miriam Baglioni
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6d3804e24c
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-
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2020-08-11 15:45:12 +02:00 |
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Miriam Baglioni
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0603ec4757
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changed test to upload the dump for covid-19 community
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2020-08-11 15:43:25 +02:00 |
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Miriam Baglioni
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7dfd56df9d
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-
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2020-08-11 15:42:35 +02:00 |
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Miriam Baglioni
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a169d7e7c1
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added test file for the MakeTar class
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2020-08-11 15:40:41 +02:00 |
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Miriam Baglioni
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acb0926b2e
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json schemas for the dumped entities and relation
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2020-08-11 15:39:48 +02:00 |
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Miriam Baglioni
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ff52c51f92
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added the communityMapPath parameter and removed the isLookUpUrl parameter
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2020-08-11 15:39:22 +02:00 |
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Miriam Baglioni
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6f43acda5e
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added the maketar and send to zenodo step. Adjusted wf parameters
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2020-08-11 15:38:20 +02:00 |
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Miriam Baglioni
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ddc19de2e9
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removed the isLookUpUrl among the parameters
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2020-08-11 15:37:47 +02:00 |
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Miriam Baglioni
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592a8ea573
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added parameter file for maketar class
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2020-08-11 15:37:14 +02:00 |
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Miriam Baglioni
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77a0951b32
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added the make archive step in the workflow
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2020-08-11 15:32:32 +02:00 |
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Miriam Baglioni
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cf4d918787
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added description, changed parameter name and added method
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2020-08-11 15:27:31 +02:00 |
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Miriam Baglioni
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dc5fc5366d
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Creation of an archive for each related dump part
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2020-08-11 15:26:06 +02:00 |
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Miriam Baglioni
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0ce49049d6
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added description
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2020-08-11 15:25:11 +02:00 |
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Miriam Baglioni
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9bae991167
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added description of the class
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2020-08-11 11:20:43 +02:00 |
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Miriam Baglioni
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341dc59ead
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removed the repartition(1). Added code for the creation of an archive containing all the parts dumped for each community
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2020-08-11 11:18:58 +02:00 |
 Sandro La Bruzzo
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fe8d640aee
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fixed error on oozie workflow
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2020-08-11 09:43:03 +02:00 |
Sandro La Bruzzo
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304590e854
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updated workflow of indexing to start from begin
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2020-08-11 09:17:47 +02:00 |
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Sandro La Bruzzo
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eaf0dc68a2
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fixed indexing
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2020-08-11 09:17:03 +02:00 |
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Miriam Baglioni
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1991a49f70
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removed reference to isLookUp to get the communityMap
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2020-08-10 18:02:56 +02:00 |
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Miriam Baglioni
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c378c38546
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disabled test. The testing functionalities for hte upload in Zenode are moved to common
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2020-08-10 12:41:11 +02:00 |
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Miriam Baglioni
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63ad0ed209
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changed to use communityMapPath instead of IsLookUp
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2020-08-10 12:40:19 +02:00 |
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Miriam Baglioni
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cec795f2ea
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changed resources to mirror changes in the model
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2020-08-10 12:39:35 +02:00 |
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Miriam Baglioni
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f50e3e7333
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changed the class for which to generate the schema
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2020-08-10 12:03:49 +02:00 |
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Miriam Baglioni
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b8c26f656c
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test using communityMapPath instead of isLookUp
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2020-08-10 12:02:55 +02:00 |
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Miriam Baglioni
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fe88904df0
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changed the wf definition
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2020-08-10 12:01:14 +02:00 |
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Miriam Baglioni
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87856467e2
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removed isLookUpUrl and added code to read from HDSF the communitymap
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2020-08-10 11:38:41 +02:00 |
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Miriam Baglioni
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1cf7043e26
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removed isLookUoUrl from the parameters
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2020-08-10 11:38:03 +02:00 |
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Claudio Atzori
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cf6b68ce5a
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Merge pull request 'data provision workflow: add nodes to perform DELETE BY QUERY before the indexing begins and COMMIT after the indexing is completed' (#36) from provision_indexing into master
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2020-08-10 11:16:29 +02:00 |
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Sandro La Bruzzo
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0ade33ad15
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updated mergeFrom function for DLI Unknown
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2020-08-10 10:18:35 +02:00 |
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Miriam Baglioni
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46986aae2d
|
added the new parameter for newdeposion/newversion and concept_record_id
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2020-08-07 18:00:06 +02:00 |
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Miriam Baglioni
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3aedfdf0d6
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added option to do a new deposition or new version of an old deposition
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2020-08-07 17:49:14 +02:00 |
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Miriam Baglioni
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1b3ad1bce6
|
filter out authors pid (only orcid). Added check to get unique provenance for context id. filtr out countries with code UNKNOWN
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2020-08-07 17:48:18 +02:00 |
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Miriam Baglioni
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5ceb8c5f0a
|
moved constants from graph.Constants
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2020-08-07 17:46:47 +02:00 |
|
Miriam Baglioni
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6c65c93c0e
|
refactoring
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2020-08-07 17:45:35 +02:00 |
|
Miriam Baglioni
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68adf86fe4
|
refactoring
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2020-08-07 17:43:20 +02:00 |
|
Miriam Baglioni
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26d2ad6ebb
|
refactoring
|
2020-08-07 17:41:56 +02:00 |
|
Miriam Baglioni
|
9675af7965
|
refactoring
|
2020-08-07 17:41:07 +02:00 |
|
Miriam Baglioni
|
346a91f4d9
|
Added constants
|
2020-08-07 17:35:39 +02:00 |
|
Miriam Baglioni
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d52b0e1797
|
no use of IsLookUp. The query is done once and its result stored on HDFS. The path to the result is given instead of the isLookUpUrl
|
2020-08-07 17:34:40 +02:00 |
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Miriam Baglioni
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ae1b7fbfdb
|
changed method signature from set of mapkey entries to String representing path on file system where to find the map
|
2020-08-07 17:32:27 +02:00 |
|
Miriam Baglioni
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931fa2ff00
|
removed dependencies
|
2020-08-07 16:46:37 +02:00 |
|
Miriam Baglioni
|
545ea9f77e
|
moved in common. Zenodo response model and APIClient to deposit in Zenodo
|
2020-08-07 16:44:51 +02:00 |
|
Sandro La Bruzzo
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ddb1446ceb
|
fixed test
|
2020-08-07 11:34:33 +02:00 |
|
Sandro La Bruzzo
|
718bc7bbc8
|
implemented provision workflows using the new implementation with Dataset
|
2020-08-07 11:05:18 +02:00 |
|
Miriam Baglioni
|
da9b012c15
|
fixed dewcription
|
2020-08-06 11:55:44 +02:00 |
|
Miriam Baglioni
|
6dbadcf181
|
the new schema for the dumped result
|
2020-08-06 11:05:56 +02:00 |
|
Sandro La Bruzzo
|
a44e5abaa7
|
reformat code
|
2020-08-06 10:30:22 +02:00 |
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Sandro La Bruzzo
|
4fb1821fab
|
Merge branch 'master' of code-repo.d4science.org:D-Net/dnet-hadoop
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2020-08-06 10:28:31 +02:00 |
|
Sandro La Bruzzo
|
9d9e9edbd2
|
improved extractEntity Relation workflows using dataset
|
2020-08-06 10:28:24 +02:00 |
|
Miriam Baglioni
|
adf0ca5aa7
|
test to send is from hdfs
|
2020-08-05 14:24:43 +02:00 |
|
Miriam Baglioni
|
14eda4f46e
|
added method to try to put inputstream to zenodo
|
2020-08-05 14:18:25 +02:00 |
|
Miriam Baglioni
|
e737a47270
|
added classes to try to send input stream to zenodo for the upload
|
2020-08-05 14:17:40 +02:00 |
|
Miriam Baglioni
|
873e9cd50c
|
changed hadoop setting to connect to s3
|
2020-08-04 15:37:25 +02:00 |
 Alessia Bardi
|
a29565ff57
|
code formatting
|
2020-08-04 12:55:27 +02:00 |
|
Alessia Bardi
|
01db29e208
|
fixes redmine issue #5846: datacite and its different namespace declarations
|
2020-08-04 12:53:48 +02:00 |
|
Alessia Bardi
|
b4e4e5f858
|
do not duplicate result PIDs
|
2020-08-04 12:52:14 +02:00 |
|
Alessia Bardi
|
09a323d18d
|
testing a dataset from Nakala
|
2020-08-04 12:50:52 +02:00 |
|
Alessia Bardi
|
c35bf486cc
|
added handle among the possible PIDs
|
2020-08-04 12:50:12 +02:00 |
|
Miriam Baglioni
|
5b651abf82
|
merge branch with master
|
2020-08-04 10:14:07 +02:00 |
|
Miriam Baglioni
|
88e4c3b751
|
added default trust to context bulktagged
|
2020-08-04 10:13:25 +02:00 |
|
Miriam Baglioni
|
f9342cb484
|
added constant
|
2020-08-03 18:32:35 +02:00 |
|
Miriam Baglioni
|
96c3c891f4
|
added trust
|
2020-08-03 18:32:17 +02:00 |
|
Miriam Baglioni
|
53656600ad
|
changed XQuery to select only community and ri with status not hidden
|
2020-08-03 18:29:30 +02:00 |
|
Miriam Baglioni
|
b34177d8ef
|
merge upstream
|
2020-08-03 18:13:42 +02:00 |
|
Miriam Baglioni
|
901ae37f7b
|
added step to workflow
|
2020-08-03 18:12:54 +02:00 |
|
Miriam Baglioni
|
fa38cdb10b
|
added resource
|
2020-08-03 18:11:12 +02:00 |
|
Miriam Baglioni
|
e9fcc0b2f1
|
commented test unit - to decide change for mirroring the changed logics
|
2020-08-03 18:10:53 +02:00 |
|
Miriam Baglioni
|
e43aeb139a
|
added new property file and changed some parameter to old files
|
2020-08-03 18:07:28 +02:00 |