 Miriam Baglioni
|
7d2eda43ca
|
added new non mandatory property publish to determine if to publish the upload or leave it pending. Default value flase
|
2020-11-03 16:57:01 +01:00 |
|
Miriam Baglioni
|
cbbb1bdc54
|
moved business logic to new class in common for handling the zip of hte archives
|
2020-11-03 16:55:50 +01:00 |
|
Miriam Baglioni
|
d4382b54df
|
moved the tar archive with maz size on common module
|
2020-11-03 16:54:50 +01:00 |
 Claudio Atzori
|
5310e56dba
|
remove empy PIDs
|
2020-11-03 11:52:10 +01:00 |
 Sandro La Bruzzo
|
754c86f33e
|
fixed test to work on jenkins
|
2020-11-02 09:35:01 +01:00 |
|
Miriam Baglioni
|
dabb33e018
|
changed the discriminant for which split the file
|
2020-10-30 17:52:22 +01:00 |
|
Miriam Baglioni
|
0fba08eae4
|
max allowed size per file 10 Gb
|
2020-10-30 16:05:55 +01:00 |
|
Miriam Baglioni
|
b828587252
|
prevent the code to cicle indefinetly
|
2020-10-30 15:01:25 +01:00 |
|
Miriam Baglioni
|
f747e303ac
|
classes for dumping of the graph as ttl file
|
2020-10-30 14:13:45 +01:00 |
|
Miriam Baglioni
|
16baf5b69e
|
formatting
|
2020-10-30 14:13:14 +01:00 |
|
Miriam Baglioni
|
a9eef9c852
|
added check for possible Optional value in relation dataInfo
|
2020-10-30 14:12:28 +01:00 |
|
Miriam Baglioni
|
5f4de9a962
|
formatting
|
2020-10-30 14:11:40 +01:00 |
|
Miriam Baglioni
|
14bf2e7238
|
added option to split dumps bigger that 40Gb on different files
|
2020-10-30 14:09:04 +01:00 |
|
Miriam Baglioni
|
78fdb11c3f
|
merge branch with master
|
2020-10-29 12:55:22 +01:00 |
|
Sandro La Bruzzo
|
1d9fdb7367
|
fixed spark memory issue in SparkSplitOafTODLIEntities
|
2020-10-28 12:30:32 +01:00 |
|
Miriam Baglioni
|
d2374e3b9e
|
added code to handle cases where the funding tree is not existing
|
2020-10-27 16:15:21 +01:00 |
|
Miriam Baglioni
|
5d3012eeb4
|
changed code to dump only the programme list and not the classification list
|
2020-10-27 16:14:18 +01:00 |
|
Miriam Baglioni
|
3241ec1777
|
added connection timeout and socket timeout 600 sec
|
2020-10-27 16:12:11 +01:00 |
 Alessia Bardi
|
1425d810a8
|
testing mapping
|
2020-10-19 17:46:14 +02:00 |
|
Sandro La Bruzzo
|
fed711da80
|
Merge remote-tracking branch 'origin/master' into merge_record_to_common
|
2020-10-13 15:32:45 +02:00 |
|
Alessia Bardi
|
8775a64bc1
|
Merge pull request 'Merging different compatibility levels (pinocchio operator)' (#47) from merge_graph into master
|
2020-10-09 14:44:52 +02:00 |
|
Claudio Atzori
|
e751c1402f
|
Merge branch 'master' of https://code-repo.d4science.org/D-Net/dnet-hadoop
|
2020-10-09 13:53:21 +02:00 |
|
Claudio Atzori
|
b961dc7d1e
|
added originalid to the fields in the result graph view
|
2020-10-09 13:53:15 +02:00 |
|
Sandro La Bruzzo
|
eec418cd26
|
moved AuthoreMerger into dhp-common
|
2020-10-08 10:33:55 +02:00 |
|
Sandro La Bruzzo
|
fe0a7870e6
|
Added test to check if merge authors works
|
2020-10-08 10:33:12 +02:00 |
|
Sandro La Bruzzo
|
cd9c377d18
|
adpted scholexplorer Dump generation to the new Dataset definition
|
2020-10-08 10:10:13 +02:00 |
|
Claudio Atzori
|
a3f37a9414
|
javadoc
|
2020-10-07 16:44:22 +02:00 |
|
Claudio Atzori
|
8d85a2fced
|
[BETA wf only] datasources involved in the merge operation doesn't obey to the infra precedence policy, but relies on a custom behaviour that, given two datasources from beta and prod returns the one from prod with the highest compatibility among the two
|
2020-10-07 16:28:52 +02:00 |
|
Miriam Baglioni
|
ae08b3c0dd
|
merge branch with master
|
2020-10-05 11:35:55 +02:00 |
|
Miriam Baglioni
|
11b7eaae09
|
changed the name of the folder where to store the context entity from context to communities_infrastructures
|
2020-10-05 11:24:54 +02:00 |
|
Miriam Baglioni
|
32bffb0134
|
changed the name from communities_infrastructures to communities_infrastuctures.json
|
2020-10-05 11:24:17 +02:00 |
|
Miriam Baglioni
|
25cbcf6114
|
changed to solve issues about names. context renamed communities_infrastructure.json and removed the double json.gz extention to the name of the part in the tar
|
2020-10-02 12:17:46 +02:00 |
|
Claudio Atzori
|
49ae3450a9
|
code formatting
|
2020-10-02 09:43:24 +02:00 |
|
Claudio Atzori
|
c2a6e2a9bf
|
fixed mapping for datasource journal info (ISSNs)
|
2020-10-02 09:37:08 +02:00 |
|
Miriam Baglioni
|
01117a46e1
|
whole workflow activated
|
2020-10-01 17:19:21 +02:00 |
|
Miriam Baglioni
|
cfb5766c6b
|
removed double json.gz from names of files in the tar
|
2020-10-01 17:18:34 +02:00 |
|
Miriam Baglioni
|
fcaedac980
|
merge branch with master
|
2020-10-01 16:46:59 +02:00 |
|
Miriam Baglioni
|
c6e6ed1bd8
|
merge branch with master
|
2020-10-01 16:24:41 +02:00 |
|
Claudio Atzori
|
2e9e13444d
|
author pids made unique by value
|
2020-10-01 12:50:40 +02:00 |
|
Claudio Atzori
|
e265c3e125
|
cleaning functions factored out in a dedicated class
|
2020-10-01 10:50:15 +02:00 |
|
Claudio Atzori
|
4287164aba
|
include relevantdate field in the result view
|
2020-10-01 10:28:55 +02:00 |
|
Miriam Baglioni
|
7b6a7333e6
|
merge branch with master
|
2020-09-25 16:42:07 +02:00 |
|
Miriam Baglioni
|
983a12ed15
|
temporary modification to allow the upload of files in the sandbox without the neew to recreate the mapping from scratch
|
2020-09-25 16:41:51 +02:00 |
|
Miriam Baglioni
|
8b36d19182
|
added property depositionId and chenage property newVersion that became string from boolean to handle the three possible distinct values
|
2020-09-25 16:41:15 +02:00 |
|
Miriam Baglioni
|
ed5239f9ec
|
added new code to handle the new possibility to upload files to an already open deposition
|
2020-09-25 16:34:32 +02:00 |
|
Miriam Baglioni
|
3a8c524fce
|
refactor
|
2020-09-25 16:34:02 +02:00 |
|
Miriam Baglioni
|
54800fb9b0
|
enabled only the step to upload in zenodo
|
2020-09-25 14:40:22 +02:00 |
|
Miriam Baglioni
|
de6c4d46d8
|
fixed conflicts
|
2020-09-24 15:35:01 +02:00 |
|
Claudio Atzori
|
044d3a0214
|
fixed query used to load datasources in the Graph
|
2020-09-24 13:48:58 +02:00 |
|
Claudio Atzori
|
27df1cea6d
|
code formatting
|
2020-09-24 12:16:00 +02:00 |
|
Claudio Atzori
|
fb22f4d70b
|
included values for projects fundedamount and totalcost fields in the mapping tests. Swapped expected and actual values in junit test assertions
|
2020-09-24 12:10:59 +02:00 |
|
Claudio Atzori
|
42f55395c8
|
fixed order of the ISSNs returned by the SQL query
|
2020-09-24 12:09:58 +02:00 |
|
Claudio Atzori
|
9a7e72d528
|
using concat_ws to join textual columns from PSQL. When using || to perform the concatenation, Null columns makes the operation result to be Null
|
2020-09-24 10:42:47 +02:00 |
|
Claudio Atzori
|
9e3e93c6b6
|
setting the correct issn type in the datasource.journal element
|
2020-09-24 10:39:16 +02:00 |
|
Miriam Baglioni
|
39eb8ab25b
|
changed the dump to move from h2020programme to h2020classification
|
2020-09-23 17:33:00 +02:00 |
|
Miriam Baglioni
|
c2b5c780ff
|
-
|
2020-09-14 14:34:03 +02:00 |
|
Miriam Baglioni
|
e2ceefe9be
|
-
|
2020-09-14 14:33:28 +02:00 |
|
Miriam Baglioni
|
1f893e63dc
|
-
|
2020-09-14 14:33:10 +02:00 |
|
Claudio Atzori
|
8a523474b7
|
code formatting
|
2020-09-07 11:40:16 +02:00 |
|
Miriam Baglioni
|
b72a7dad46
|
resuorce for pid graph dump
|
2020-08-24 17:09:01 +02:00 |
|
Miriam Baglioni
|
8694bb9b31
|
refactoring due to compilation
|
2020-08-24 17:07:34 +02:00 |
|
Miriam Baglioni
|
8a069a4fea
|
-
|
2020-08-24 17:01:30 +02:00 |
|
Miriam Baglioni
|
34fa96f3b1
|
-
|
2020-08-24 17:00:20 +02:00 |
|
Miriam Baglioni
|
5fb2949cb8
|
added utils methods
|
2020-08-24 17:00:09 +02:00 |
|
Miriam Baglioni
|
2a540b6c01
|
added constants for the pid graph dump
|
2020-08-24 16:55:35 +02:00 |
|
Miriam Baglioni
|
da103c399a
|
resources for the pid graph dump test
|
2020-08-24 16:52:07 +02:00 |
|
Miriam Baglioni
|
630a6a1fe7
|
first tests for the pid graph dump
|
2020-08-24 16:51:26 +02:00 |
|
Miriam Baglioni
|
40c8d2de7b
|
test resources for the dump of the pids graph
|
2020-08-24 16:50:39 +02:00 |
|
Miriam Baglioni
|
bef79d3bdf
|
first attempt to the dump of pids graph
|
2020-08-24 16:49:38 +02:00 |
|
Miriam Baglioni
|
85203c16e3
|
merge branch with master
|
2020-08-19 11:49:03 +02:00 |
|
Miriam Baglioni
|
2c783793ba
|
removed the affiliation from the author to mirror the changes in the model
|
2020-08-19 11:48:12 +02:00 |
|
Miriam Baglioni
|
f6bf888016
|
removed affiliation from author to mirror the changes in the model
|
2020-08-19 11:41:41 +02:00 |
|
Miriam Baglioni
|
66d0e0d3f2
|
-
|
2020-08-19 11:31:50 +02:00 |
|
Miriam Baglioni
|
1c593a9cfe
|
-
|
2020-08-19 11:29:51 +02:00 |
|
Miriam Baglioni
|
e42b2f5ae2
|
-
|
2020-08-19 11:29:09 +02:00 |
|
Miriam Baglioni
|
f81ee22418
|
changed to mirror the changes in the model (Instance, CommunityInstance, GraphResult)
|
2020-08-19 11:28:26 +02:00 |
|
Miriam Baglioni
|
387be43fd4
|
changed to discriminate if dumping all the results type together or each one in its own archive
|
2020-08-19 11:25:27 +02:00 |
|
Miriam Baglioni
|
c5858afb88
|
added parameter to guide the dump for the result (resultAggregation). true if all the result types should be dump together, false otherwise.
|
2020-08-19 11:24:14 +02:00 |
|
Miriam Baglioni
|
d407852ac2
|
changed to reflect the changed in the model
|
2020-08-19 11:15:05 +02:00 |
|
Miriam Baglioni
|
47c21a8961
|
refactoring due to compilation
|
2020-08-19 11:11:57 +02:00 |
|
Miriam Baglioni
|
5570678c65
|
changed parameter name from hfdsNameNode to nameNode
|
2020-08-19 10:59:26 +02:00 |
|
Miriam Baglioni
|
dc5096a327
|
refactoring due to compilation
|
2020-08-19 10:57:36 +02:00 |
|
Miriam Baglioni
|
96600ed04a
|
modified test resource for mirroring the deletion of affiliation from author parameters
|
2020-08-14 20:41:49 +02:00 |
|
Miriam Baglioni
|
09f5b92763
|
added specific reference to class
|
2020-08-14 20:00:09 +02:00 |
|
Miriam Baglioni
|
37e7c43652
|
changed parameter name from hdfsNaemNode to nameNode
|
2020-08-14 18:18:25 +02:00 |
|
Miriam Baglioni
|
d2a8a4961a
|
refactoring
|
2020-08-13 18:50:33 +02:00 |
|
Miriam Baglioni
|
a5043de5da
|
added method to get the mapped instance
|
2020-08-13 18:45:50 +02:00 |
|
Miriam Baglioni
|
fcd10f452c
|
changed because of #40 (comment)
|
2020-08-13 12:55:32 +02:00 |
|
Miriam Baglioni
|
fd48ae3b85
|
changed because of #40 (comment)
|
2020-08-13 12:19:15 +02:00 |
|
Miriam Baglioni
|
04a3e1ab38
|
disabled tests
|
2020-08-13 12:18:13 +02:00 |
|
Miriam Baglioni
|
2ede397933
|
Apply change because of #40 (comment)
|
2020-08-13 12:16:39 +02:00 |
|
Miriam Baglioni
|
bfd1fcde6d
|
removed not useful method and changed because of #40 (comment) and #40 (comment)
|
2020-08-13 12:14:37 +02:00 |
|
Miriam Baglioni
|
7fd8397123
|
apply changes in #40 (comment)
|
2020-08-13 12:13:15 +02:00 |
|
Miriam Baglioni
|
753d448cc9
|
apply changes in #40 (comment)
|
2020-08-13 12:12:58 +02:00 |
|
Miriam Baglioni
|
c0e071fa26
|
apply changes in #40 (comment)
|
2020-08-13 12:12:40 +02:00 |
|
Miriam Baglioni
|
526db915bc
|
apply changes in #40 (comment)
|
2020-08-13 12:12:16 +02:00 |
|
Miriam Baglioni
|
b0fab0d138
|
apply changes in #40 (comment)
|
2020-08-13 12:11:57 +02:00 |
|
Miriam Baglioni
|
1b6320b251
|
apply changes in #40 (comment)
|
2020-08-13 12:11:41 +02:00 |
|
Miriam Baglioni
|
743d31be22
|
apply changes in #40 (comment)
|
2020-08-13 12:11:22 +02:00 |
|
Miriam Baglioni
|
65b48df652
|
apply changes in #40 (comment)
|
2020-08-13 12:11:06 +02:00 |
|
Miriam Baglioni
|
90b54d3efb
|
apply changes in #40 (comment)
|
2020-08-13 12:08:24 +02:00 |
|
Miriam Baglioni
|
69bbb9592a
|
apply changes in #40 (comment)
|
2020-08-13 12:07:39 +02:00 |
|
Miriam Baglioni
|
945323299a
|
apply changes in #40 (comment)
|
2020-08-13 12:07:24 +02:00 |
|
Miriam Baglioni
|
e04c993247
|
apply changes in #40 (comment)
|
2020-08-13 12:07:07 +02:00 |
|
Miriam Baglioni
|
ed0812d0ce
|
apply changes in #40 (comment)
|
2020-08-13 12:06:49 +02:00 |
|
Miriam Baglioni
|
d55cfe0ea5
|
apply changes in #40 (comment)
|
2020-08-13 12:06:20 +02:00 |
|
Miriam Baglioni
|
80866bec7d
|
apply changes in #40 (comment)
|
2020-08-13 12:06:05 +02:00 |
|
Miriam Baglioni
|
1400978c0a
|
apply changes in #40 (comment)
|
2020-08-13 12:05:44 +02:00 |
|
Miriam Baglioni
|
7b941a2e0a
|
apply changes in #40 (comment)
|
2020-08-13 12:05:17 +02:00 |
|
Miriam Baglioni
|
f7474f50fe
|
apply changes in #40 (comment)
|
2020-08-13 12:04:52 +02:00 |
|
Miriam Baglioni
|
367203f412
|
apply changes in #40 (comment)
|
2020-08-13 12:04:33 +02:00 |
|
Miriam Baglioni
|
3ab4809d31
|
apply changes in #40 (comment)
|
2020-08-13 12:04:10 +02:00 |
|
Miriam Baglioni
|
235d4e4d6e
|
moved Context as relevant for Communities dump
|
2020-08-12 18:16:45 +02:00 |
|
Miriam Baglioni
|
adf9f96a67
|
test for extraction of relation between organizations and context
|
2020-08-12 10:04:47 +02:00 |
|
Miriam Baglioni
|
7400cd019d
|
removed not needed variable
|
2020-08-12 10:03:33 +02:00 |
|
Miriam Baglioni
|
98d28bab5c
|
fixed missing _ in context nsprefix
|
2020-08-12 10:00:18 +02:00 |
|
Miriam Baglioni
|
25f4fbceea
|
draft of test and resources
|
2020-08-11 17:37:22 +02:00 |
|
Miriam Baglioni
|
30a2b19b65
|
changed metadata for deposition od covid-19 dump in Zenodo
|
2020-08-11 17:36:56 +02:00 |
|
Miriam Baglioni
|
49788b532a
|
changed to mirror changes in the schema
|
2020-08-11 16:05:03 +02:00 |
|
Miriam Baglioni
|
b08511287b
|
-
|
2020-08-11 16:01:36 +02:00 |
|
Miriam Baglioni
|
7e81a17068
|
changed the XQUERY to mirror the change in the code
|
2020-08-11 16:00:33 +02:00 |
|
Miriam Baglioni
|
37ad2f28e9
|
removed added | in prefix for datasource
|
2020-08-11 15:55:06 +02:00 |
|
Miriam Baglioni
|
f31c2e9461
|
enabled test
|
2020-08-11 15:49:25 +02:00 |
|
Miriam Baglioni
|
2d67476417
|
merge branch with master
|
2020-08-11 15:46:04 +02:00 |
|
Miriam Baglioni
|
6d3804e24c
|
-
|
2020-08-11 15:45:12 +02:00 |
|
Miriam Baglioni
|
0603ec4757
|
changed test to upload the dump for covid-19 community
|
2020-08-11 15:43:25 +02:00 |
|
Miriam Baglioni
|
7dfd56df9d
|
-
|
2020-08-11 15:42:35 +02:00 |
|
Miriam Baglioni
|
a169d7e7c1
|
added test file for the MakeTar class
|
2020-08-11 15:40:41 +02:00 |
|
Miriam Baglioni
|
acb0926b2e
|
json schemas for the dumped entities and relation
|
2020-08-11 15:39:48 +02:00 |
|
Miriam Baglioni
|
ff52c51f92
|
added the communityMapPath parameter and removed the isLookUpUrl parameter
|
2020-08-11 15:39:22 +02:00 |
|
Miriam Baglioni
|
6f43acda5e
|
added the maketar and send to zenodo step. Adjusted wf parameters
|
2020-08-11 15:38:20 +02:00 |
|
Miriam Baglioni
|
ddc19de2e9
|
removed the isLookUpUrl among the parameters
|
2020-08-11 15:37:47 +02:00 |
|
Miriam Baglioni
|
592a8ea573
|
added parameter file for maketar class
|
2020-08-11 15:37:14 +02:00 |
|
Miriam Baglioni
|
77a0951b32
|
added the make archive step in the workflow
|
2020-08-11 15:32:32 +02:00 |
|
Miriam Baglioni
|
cf4d918787
|
added description, changed parameter name and added method
|
2020-08-11 15:27:31 +02:00 |
|
Miriam Baglioni
|
dc5fc5366d
|
Creation of an archive for each related dump part
|
2020-08-11 15:26:06 +02:00 |
|
Miriam Baglioni
|
0ce49049d6
|
added description
|
2020-08-11 15:25:11 +02:00 |
|
Miriam Baglioni
|
9bae991167
|
added description of the class
|
2020-08-11 11:20:43 +02:00 |
|
Miriam Baglioni
|
341dc59ead
|
removed the repartition(1). Added code for the creation of an archive containing all the parts dumped for each community
|
2020-08-11 11:18:58 +02:00 |
|
Miriam Baglioni
|
1991a49f70
|
removed reference to isLookUp to get the communityMap
|
2020-08-10 18:02:56 +02:00 |
|
Miriam Baglioni
|
c378c38546
|
disabled test. The testing functionalities for hte upload in Zenode are moved to common
|
2020-08-10 12:41:11 +02:00 |
|
Miriam Baglioni
|
63ad0ed209
|
changed to use communityMapPath instead of IsLookUp
|
2020-08-10 12:40:19 +02:00 |
|
Miriam Baglioni
|
cec795f2ea
|
changed resources to mirror changes in the model
|
2020-08-10 12:39:35 +02:00 |
|
Miriam Baglioni
|
f50e3e7333
|
changed the class for which to generate the schema
|
2020-08-10 12:03:49 +02:00 |
|
Miriam Baglioni
|
b8c26f656c
|
test using communityMapPath instead of isLookUp
|
2020-08-10 12:02:55 +02:00 |
|
Miriam Baglioni
|
fe88904df0
|
changed the wf definition
|
2020-08-10 12:01:14 +02:00 |
|
Miriam Baglioni
|
87856467e2
|
removed isLookUpUrl and added code to read from HDSF the communitymap
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2020-08-10 11:38:41 +02:00 |
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Miriam Baglioni
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1cf7043e26
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removed isLookUoUrl from the parameters
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2020-08-10 11:38:03 +02:00 |
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Sandro La Bruzzo
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0ade33ad15
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updated mergeFrom function for DLI Unknown
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2020-08-10 10:18:35 +02:00 |
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Miriam Baglioni
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46986aae2d
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added the new parameter for newdeposion/newversion and concept_record_id
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2020-08-07 18:00:06 +02:00 |