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Code Issues 14 Pull Requests 12 Projects 2 Releases 2 Wiki Activity
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Commit Graph

4901 Commits

Author SHA1 Message Date
Claudio Atzori ba5475ed4c Merge pull request 'Fix cleaning of Pmid where parsing of numbers stopped at first not leading 0 (zero) character' (#345) from fix_truncated_pmid into master 
Reviewed-on: #345
 2023-10-06 14:19:49 +02:00
Claudio Atzori 6856ab28ab Merge pull request 'SWH_integration' (#343) from SWH_integration into beta 
Reviewed-on: #343
 2023-10-06 14:15:56 +02:00
Claudio Atzori 3c23d5f9bc Merge branch 'beta' into SWH_integration 2023-10-06 14:15:38 +02:00
Claudio Atzori 858931ccb6 [SWH] compress the output actionset 2023-10-06 14:03:33 +02:00
Claudio Atzori f759b18bca [SWH] aligned parameter name 2023-10-06 13:43:20 +02:00
Giambattista Bloisi 2c235e82ad Fix cleaning of Pmid where parsing of numbers stopped at first not leading 0' character 2023-10-06 12:35:54 +02:00
Claudio Atzori eed9fe0902 code formatting 2023-10-06 12:31:17 +02:00
Claudio Atzori 7f27111b1f Merge branch 'importpoci' into beta 2023-10-06 12:23:28 +02:00
Claudio Atzori 73c49b8d26 Merge branch 'beta' into SWH_integration 2023-10-06 12:21:51 +02:00
Sandro La Bruzzo 42a2dad975 implemented relation to irish funder from a Json list 2023-10-06 11:52:33 +02:00
Sandro La Bruzzo 13f332ce77 ignored jenv prop 2023-10-06 10:40:05 +02:00
Serafeim Chatzopoulos 1bb83b9188 Add prefix in SWH ID 2023-10-04 20:31:45 +03:00
Claudio Atzori ee8a39e7d2 cleanup and refinements 2023-10-04 12:32:05 +02:00
Serafeim Chatzopoulos e9f24df21c Move SWH API Key from constants to workflow param 2023-10-03 20:57:57 +03:00
Serafeim Chatzopoulos cae75fc75d Add SWH in the collectedFrom field 2023-10-03 16:55:10 +03:00
Serafeim Chatzopoulos b49a3ac9b2 Add actionsetsPath as a global WF param 2023-10-03 15:43:38 +03:00
Serafeim Chatzopoulos 24c43e0c60 Restructure workflow parameters 2023-10-03 15:11:58 +03:00
Serafeim Chatzopoulos 9f73d93e62 Add param for limiting repo Urls 2023-10-03 14:39:08 +03:00
Claudio Atzori b446a9ed98 Merge branch 'beta' into peer_reviewed 2023-10-03 10:52:23 +02:00
Claudio Atzori f344ad76d0 Merge pull request 'extended existing code to import of POCI from open citation' (#340) from importpoci into beta 
Reviewed-on: #340
 2023-10-03 10:52:11 +02:00
Claudio Atzori 5919e488dd Merge branch 'beta' into importpoci 2023-10-03 10:43:53 +02:00
Serafeim Chatzopoulos 839a8524e7 Add action for creating actionsets 2023-10-02 23:50:38 +03:00
Claudio Atzori c9a5ad6a02 extending the coverage of the peer non-unknown refereed instances 2023-10-02 16:28:42 +02:00
Miriam Baglioni d7fccdc64b fixed paths in wf to match the req of the pathname 2023-10-02 14:10:57 +02:00
Miriam Baglioni 9898470b0e Addressing comments in #340\#issuecomment-10592 2023-10-02 12:54:16 +02:00
Giambattista Bloisi c412dc162b Fix bug in conversion from dedup json model to Spark Dataset of Rows: list of strings contained the json escaped representation of the value instead of the plain value, this caused instanceTypeMatch failures because of the leading and trailing double quotes 2023-10-02 11:34:51 +02:00
Claudio Atzori 4ac06c9e37 Merge pull request 'Fix bug in conversion from dedup json model to Spark Dataset of Rows (instanceTypeMatch no longer working)' (#339) from fix_dedupfailsonmatchinginstances into master 
Reviewed-on: #339
 2023-10-02 11:34:20 +02:00
Claudio Atzori fa692b3629 Merge branch 'master' into fix_dedupfailsonmatchinginstances 2023-10-02 11:28:16 +02:00
Claudio Atzori 5d09b7db8b Merge pull request 'SparkPropagateRelation relations do not propagate deletedByInference and invisible' (#333) from consistency_keep_mergerels into beta 
Reviewed-on: #333
 2023-10-02 11:27:57 +02:00
Claudio Atzori 7b403a920f Merge branch 'beta' into consistency_keep_mergerels 2023-10-02 11:26:00 +02:00
Claudio Atzori dc86018a5f Merge branch 'merge_entities_job' into beta 2023-10-02 11:24:48 +02:00
Giambattista Bloisi 3c47920c78 Use asScala to convert java List to Scala Sequence 2023-10-02 11:04:47 +02:00
Claudio Atzori 7f244d9a7a code formatting 2023-10-02 11:04:36 +02:00
Giambattista Bloisi e239b81740 Fix defect #8997: GenerateEventsJob is generating huge amounts of logs because broker entity similarity calculation consistently failed 2023-10-02 11:04:18 +02:00
Claudio Atzori ef02648399 Merge pull request 'fixed dedup configuration management in the Broker workflow' (#341) from fix_8997 into master 
Reviewed-on: #341
 2023-10-02 11:03:50 +02:00
Claudio Atzori d13bb534f0 Merge branch 'master' into fix_8997 2023-10-02 11:03:18 +02:00
Miriam Baglioni e84f5b5e64 extended existing codo to accomodate import of POCI from open citation 2023-10-02 09:25:16 +02:00
Serafeim Chatzopoulos ab0d70691c Add step for archiving repoUrls to SWH 2023-09-28 20:56:18 +03:00
Giambattista Bloisi 775c3f704a Fix bug in conversion from dedup json model to Spark Dataset of Rows: list of strings contained the json escaped representation of the value instead of the plain value, this caused instanceTypeMatch failures because of the leading and trailing double quotes 2023-09-27 22:30:47 +02:00
Serafeim Chatzopoulos ed9c81a0b7 Add steps to collect last visit data && archive not found repository URLs 2023-09-27 19:00:54 +03:00
Sandro La Bruzzo 9c3ab11d5b Merge branch 'master' of code-repo.d4science.org:D-Net/dnet-hadoop 2023-09-25 15:29:19 +02:00
Sandro La Bruzzo 423ef30676 minor fix on the aggregation of uniprot and pdb 2023-09-25 15:28:58 +02:00
Giambattista Bloisi 7152d47f84 Use asScala to convert java List to Scala Sequence 2023-09-20 16:14:27 +02:00
Claudio Atzori 4853c19b5e code formatting 2023-09-20 15:53:21 +02:00
Giambattista Bloisi 1f226d1dce Fix defect #8997: GenerateEventsJob is generating huge amounts of logs because broker entity similarity calculation consistently failed 2023-09-20 15:42:00 +02:00
Alessia Bardi 0935d7757c Use v5 of the UNIBI Gold ISSN list in test 2023-09-20 15:41:35 +02:00
Alessia Bardi cc7204a089 tests for d4science catalog 2023-09-20 15:38:32 +02:00
Sandro La Bruzzo 76476cdfb6 Added maven repo for dependencies that are not in maven central 2023-09-20 10:33:14 +02:00
Alessia Bardi 6186cdc2cc Use v5 of the UNIBI Gold ISSN list in test 2023-09-19 14:47:01 +02:00
Alessia Bardi d94b9bebf7 Merge branch 'master' of https://code-repo.d4science.org/D-Net/dnet-hadoop 2023-09-19 13:38:45 +02:00