 Miriam Baglioni
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8694bb9b31
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refactoring due to compilation
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2020-08-24 17:07:34 +02:00 |
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Miriam Baglioni
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8a069a4fea
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-
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2020-08-24 17:01:30 +02:00 |
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Miriam Baglioni
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34fa96f3b1
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-
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2020-08-24 17:00:20 +02:00 |
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Miriam Baglioni
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5fb2949cb8
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added utils methods
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2020-08-24 17:00:09 +02:00 |
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Miriam Baglioni
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2a540b6c01
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added constants for the pid graph dump
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2020-08-24 16:55:35 +02:00 |
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Miriam Baglioni
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da103c399a
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resources for the pid graph dump test
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2020-08-24 16:52:07 +02:00 |
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Miriam Baglioni
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630a6a1fe7
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first tests for the pid graph dump
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2020-08-24 16:51:26 +02:00 |
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Miriam Baglioni
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40c8d2de7b
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test resources for the dump of the pids graph
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2020-08-24 16:50:39 +02:00 |
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Miriam Baglioni
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bef79d3bdf
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first attempt to the dump of pids graph
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2020-08-24 16:49:38 +02:00 |
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Miriam Baglioni
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85203c16e3
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merge branch with master
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2020-08-19 11:49:03 +02:00 |
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Miriam Baglioni
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2c783793ba
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removed the affiliation from the author to mirror the changes in the model
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2020-08-19 11:48:12 +02:00 |
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Miriam Baglioni
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f6bf888016
|
removed affiliation from author to mirror the changes in the model
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2020-08-19 11:41:41 +02:00 |
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Miriam Baglioni
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66d0e0d3f2
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-
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2020-08-19 11:31:50 +02:00 |
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Miriam Baglioni
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1c593a9cfe
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-
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2020-08-19 11:29:51 +02:00 |
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Miriam Baglioni
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e42b2f5ae2
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-
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2020-08-19 11:29:09 +02:00 |
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Miriam Baglioni
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f81ee22418
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changed to mirror the changes in the model (Instance, CommunityInstance, GraphResult)
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2020-08-19 11:28:26 +02:00 |
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Miriam Baglioni
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387be43fd4
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changed to discriminate if dumping all the results type together or each one in its own archive
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2020-08-19 11:25:27 +02:00 |
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Miriam Baglioni
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c5858afb88
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added parameter to guide the dump for the result (resultAggregation). true if all the result types should be dump together, false otherwise.
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2020-08-19 11:24:14 +02:00 |
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Miriam Baglioni
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d407852ac2
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changed to reflect the changed in the model
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2020-08-19 11:15:05 +02:00 |
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Miriam Baglioni
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47c21a8961
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refactoring due to compilation
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2020-08-19 11:11:57 +02:00 |
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Miriam Baglioni
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5570678c65
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changed parameter name from hfdsNameNode to nameNode
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2020-08-19 10:59:26 +02:00 |
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Miriam Baglioni
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dc5096a327
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refactoring due to compilation
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2020-08-19 10:57:36 +02:00 |
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Miriam Baglioni
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96600ed04a
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modified test resource for mirroring the deletion of affiliation from author parameters
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2020-08-14 20:41:49 +02:00 |
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Miriam Baglioni
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09f5b92763
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added specific reference to class
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2020-08-14 20:00:09 +02:00 |
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Miriam Baglioni
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37e7c43652
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changed parameter name from hdfsNaemNode to nameNode
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2020-08-14 18:18:25 +02:00 |
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Miriam Baglioni
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d2a8a4961a
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refactoring
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2020-08-13 18:50:33 +02:00 |
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Miriam Baglioni
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a5043de5da
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added method to get the mapped instance
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2020-08-13 18:45:50 +02:00 |
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Miriam Baglioni
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fcd10f452c
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changed because of #40 (comment)
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2020-08-13 12:55:32 +02:00 |
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Miriam Baglioni
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fd48ae3b85
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changed because of #40 (comment)
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2020-08-13 12:19:15 +02:00 |
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Miriam Baglioni
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04a3e1ab38
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disabled tests
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2020-08-13 12:18:13 +02:00 |
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Miriam Baglioni
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2ede397933
|
Apply change because of #40 (comment)
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2020-08-13 12:16:39 +02:00 |
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Miriam Baglioni
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bfd1fcde6d
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removed not useful method and changed because of #40 (comment) and #40 (comment)
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2020-08-13 12:14:37 +02:00 |
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Miriam Baglioni
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7fd8397123
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apply changes in #40 (comment)
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2020-08-13 12:13:15 +02:00 |
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Miriam Baglioni
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753d448cc9
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apply changes in #40 (comment)
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2020-08-13 12:12:58 +02:00 |
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Miriam Baglioni
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c0e071fa26
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apply changes in #40 (comment)
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2020-08-13 12:12:40 +02:00 |
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Miriam Baglioni
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526db915bc
|
apply changes in #40 (comment)
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2020-08-13 12:12:16 +02:00 |
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Miriam Baglioni
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b0fab0d138
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apply changes in #40 (comment)
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2020-08-13 12:11:57 +02:00 |
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Miriam Baglioni
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1b6320b251
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apply changes in #40 (comment)
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2020-08-13 12:11:41 +02:00 |
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Miriam Baglioni
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743d31be22
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apply changes in #40 (comment)
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2020-08-13 12:11:22 +02:00 |
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Miriam Baglioni
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65b48df652
|
apply changes in #40 (comment)
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2020-08-13 12:11:06 +02:00 |
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Miriam Baglioni
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90b54d3efb
|
apply changes in #40 (comment)
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2020-08-13 12:08:24 +02:00 |
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Miriam Baglioni
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69bbb9592a
|
apply changes in #40 (comment)
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2020-08-13 12:07:39 +02:00 |
|
Miriam Baglioni
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945323299a
|
apply changes in #40 (comment)
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2020-08-13 12:07:24 +02:00 |
|
Miriam Baglioni
|
e04c993247
|
apply changes in #40 (comment)
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2020-08-13 12:07:07 +02:00 |
|
Miriam Baglioni
|
ed0812d0ce
|
apply changes in #40 (comment)
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2020-08-13 12:06:49 +02:00 |
|
Miriam Baglioni
|
d55cfe0ea5
|
apply changes in #40 (comment)
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2020-08-13 12:06:20 +02:00 |
|
Miriam Baglioni
|
80866bec7d
|
apply changes in #40 (comment)
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2020-08-13 12:06:05 +02:00 |
|
Miriam Baglioni
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1400978c0a
|
apply changes in #40 (comment)
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2020-08-13 12:05:44 +02:00 |
|
Miriam Baglioni
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7b941a2e0a
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apply changes in #40 (comment)
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2020-08-13 12:05:17 +02:00 |
|
Miriam Baglioni
|
f7474f50fe
|
apply changes in #40 (comment)
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2020-08-13 12:04:52 +02:00 |
|
Miriam Baglioni
|
367203f412
|
apply changes in #40 (comment)
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2020-08-13 12:04:33 +02:00 |
|
Miriam Baglioni
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3ab4809d31
|
apply changes in #40 (comment)
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2020-08-13 12:04:10 +02:00 |
|
Miriam Baglioni
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235d4e4d6e
|
moved Context as relevant for Communities dump
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2020-08-12 18:16:45 +02:00 |
|
Miriam Baglioni
|
adf9f96a67
|
test for extraction of relation between organizations and context
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2020-08-12 10:04:47 +02:00 |
|
Miriam Baglioni
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7400cd019d
|
removed not needed variable
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2020-08-12 10:03:33 +02:00 |
|
Miriam Baglioni
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98d28bab5c
|
fixed missing _ in context nsprefix
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2020-08-12 10:00:18 +02:00 |
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Miriam Baglioni
|
25f4fbceea
|
draft of test and resources
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2020-08-11 17:37:22 +02:00 |
|
Miriam Baglioni
|
30a2b19b65
|
changed metadata for deposition od covid-19 dump in Zenodo
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2020-08-11 17:36:56 +02:00 |
|
Miriam Baglioni
|
49788b532a
|
changed to mirror changes in the schema
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2020-08-11 16:05:03 +02:00 |
|
Miriam Baglioni
|
b08511287b
|
-
|
2020-08-11 16:01:36 +02:00 |
|
Miriam Baglioni
|
7e81a17068
|
changed the XQUERY to mirror the change in the code
|
2020-08-11 16:00:33 +02:00 |
|
Miriam Baglioni
|
37ad2f28e9
|
removed added | in prefix for datasource
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2020-08-11 15:55:06 +02:00 |
|
Miriam Baglioni
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f31c2e9461
|
enabled test
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2020-08-11 15:49:25 +02:00 |
|
Miriam Baglioni
|
2d67476417
|
merge branch with master
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2020-08-11 15:46:04 +02:00 |
|
Miriam Baglioni
|
6d3804e24c
|
-
|
2020-08-11 15:45:12 +02:00 |
|
Miriam Baglioni
|
0603ec4757
|
changed test to upload the dump for covid-19 community
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2020-08-11 15:43:25 +02:00 |
|
Miriam Baglioni
|
7dfd56df9d
|
-
|
2020-08-11 15:42:35 +02:00 |
|
Miriam Baglioni
|
a169d7e7c1
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added test file for the MakeTar class
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2020-08-11 15:40:41 +02:00 |
|
Miriam Baglioni
|
acb0926b2e
|
json schemas for the dumped entities and relation
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2020-08-11 15:39:48 +02:00 |
|
Miriam Baglioni
|
ff52c51f92
|
added the communityMapPath parameter and removed the isLookUpUrl parameter
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2020-08-11 15:39:22 +02:00 |
|
Miriam Baglioni
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6f43acda5e
|
added the maketar and send to zenodo step. Adjusted wf parameters
|
2020-08-11 15:38:20 +02:00 |
|
Miriam Baglioni
|
ddc19de2e9
|
removed the isLookUpUrl among the parameters
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2020-08-11 15:37:47 +02:00 |
|
Miriam Baglioni
|
592a8ea573
|
added parameter file for maketar class
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2020-08-11 15:37:14 +02:00 |
|
Miriam Baglioni
|
77a0951b32
|
added the make archive step in the workflow
|
2020-08-11 15:32:32 +02:00 |
|
Miriam Baglioni
|
cf4d918787
|
added description, changed parameter name and added method
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2020-08-11 15:27:31 +02:00 |
|
Miriam Baglioni
|
dc5fc5366d
|
Creation of an archive for each related dump part
|
2020-08-11 15:26:06 +02:00 |
|
Miriam Baglioni
|
0ce49049d6
|
added description
|
2020-08-11 15:25:11 +02:00 |
|
Miriam Baglioni
|
9bae991167
|
added description of the class
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2020-08-11 11:20:43 +02:00 |
|
Miriam Baglioni
|
341dc59ead
|
removed the repartition(1). Added code for the creation of an archive containing all the parts dumped for each community
|
2020-08-11 11:18:58 +02:00 |
|
Miriam Baglioni
|
1991a49f70
|
removed reference to isLookUp to get the communityMap
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2020-08-10 18:02:56 +02:00 |
|
Miriam Baglioni
|
c378c38546
|
disabled test. The testing functionalities for hte upload in Zenode are moved to common
|
2020-08-10 12:41:11 +02:00 |
|
Miriam Baglioni
|
63ad0ed209
|
changed to use communityMapPath instead of IsLookUp
|
2020-08-10 12:40:19 +02:00 |
|
Miriam Baglioni
|
cec795f2ea
|
changed resources to mirror changes in the model
|
2020-08-10 12:39:35 +02:00 |
|
Miriam Baglioni
|
f50e3e7333
|
changed the class for which to generate the schema
|
2020-08-10 12:03:49 +02:00 |
|
Miriam Baglioni
|
b8c26f656c
|
test using communityMapPath instead of isLookUp
|
2020-08-10 12:02:55 +02:00 |
|
Miriam Baglioni
|
fe88904df0
|
changed the wf definition
|
2020-08-10 12:01:14 +02:00 |
|
Miriam Baglioni
|
87856467e2
|
removed isLookUpUrl and added code to read from HDSF the communitymap
|
2020-08-10 11:38:41 +02:00 |
|
Miriam Baglioni
|
1cf7043e26
|
removed isLookUoUrl from the parameters
|
2020-08-10 11:38:03 +02:00 |
 Sandro La Bruzzo
|
0ade33ad15
|
updated mergeFrom function for DLI Unknown
|
2020-08-10 10:18:35 +02:00 |
|
Miriam Baglioni
|
46986aae2d
|
added the new parameter for newdeposion/newversion and concept_record_id
|
2020-08-07 18:00:06 +02:00 |
|
Miriam Baglioni
|
3aedfdf0d6
|
added option to do a new deposition or new version of an old deposition
|
2020-08-07 17:49:14 +02:00 |
|
Miriam Baglioni
|
1b3ad1bce6
|
filter out authors pid (only orcid). Added check to get unique provenance for context id. filtr out countries with code UNKNOWN
|
2020-08-07 17:48:18 +02:00 |
|
Miriam Baglioni
|
5ceb8c5f0a
|
moved constants from graph.Constants
|
2020-08-07 17:46:47 +02:00 |
|
Miriam Baglioni
|
6c65c93c0e
|
refactoring
|
2020-08-07 17:45:35 +02:00 |
|
Miriam Baglioni
|
68adf86fe4
|
refactoring
|
2020-08-07 17:43:20 +02:00 |
|
Miriam Baglioni
|
26d2ad6ebb
|
refactoring
|
2020-08-07 17:41:56 +02:00 |
|
Miriam Baglioni
|
9675af7965
|
refactoring
|
2020-08-07 17:41:07 +02:00 |
|
Miriam Baglioni
|
346a91f4d9
|
Added constants
|
2020-08-07 17:35:39 +02:00 |
|
Miriam Baglioni
|
d52b0e1797
|
no use of IsLookUp. The query is done once and its result stored on HDFS. The path to the result is given instead of the isLookUpUrl
|
2020-08-07 17:34:40 +02:00 |
|
Miriam Baglioni
|
ae1b7fbfdb
|
changed method signature from set of mapkey entries to String representing path on file system where to find the map
|
2020-08-07 17:32:27 +02:00 |