Commit Graph

549 Commits

Author SHA1 Message Date
Miriam Baglioni 8b36d19182 added property depositionId and chenage property newVersion that became string from boolean to handle the three possible distinct values 2020-09-25 16:41:15 +02:00
Miriam Baglioni ed5239f9ec added new code to handle the new possibility to upload files to an already open deposition 2020-09-25 16:34:32 +02:00
Miriam Baglioni 3a8c524fce refactor 2020-09-25 16:34:02 +02:00
Miriam Baglioni 54800fb9b0 enabled only the step to upload in zenodo 2020-09-25 14:40:22 +02:00
Miriam Baglioni de6c4d46d8 fixed conflicts 2020-09-24 15:35:01 +02:00
Claudio Atzori 044d3a0214 fixed query used to load datasources in the Graph 2020-09-24 13:48:58 +02:00
Claudio Atzori 27df1cea6d code formatting 2020-09-24 12:16:00 +02:00
Claudio Atzori fb22f4d70b included values for projects fundedamount and totalcost fields in the mapping tests. Swapped expected and actual values in junit test assertions 2020-09-24 12:10:59 +02:00
Claudio Atzori 42f55395c8 fixed order of the ISSNs returned by the SQL query 2020-09-24 12:09:58 +02:00
Claudio Atzori 9a7e72d528 using concat_ws to join textual columns from PSQL. When using || to perform the concatenation, Null columns makes the operation result to be Null 2020-09-24 10:42:47 +02:00
Claudio Atzori 9e3e93c6b6 setting the correct issn type in the datasource.journal element 2020-09-24 10:39:16 +02:00
Miriam Baglioni 39eb8ab25b changed the dump to move from h2020programme to h2020classification 2020-09-23 17:33:00 +02:00
Miriam Baglioni c2b5c780ff - 2020-09-14 14:34:03 +02:00
Miriam Baglioni e2ceefe9be - 2020-09-14 14:33:28 +02:00
Miriam Baglioni 1f893e63dc - 2020-09-14 14:33:10 +02:00
Claudio Atzori 8a523474b7 code formatting 2020-09-07 11:40:16 +02:00
Miriam Baglioni b72a7dad46 resuorce for pid graph dump 2020-08-24 17:09:01 +02:00
Miriam Baglioni 8694bb9b31 refactoring due to compilation 2020-08-24 17:07:34 +02:00
Miriam Baglioni 8a069a4fea - 2020-08-24 17:01:30 +02:00
Miriam Baglioni 34fa96f3b1 - 2020-08-24 17:00:20 +02:00
Miriam Baglioni 5fb2949cb8 added utils methods 2020-08-24 17:00:09 +02:00
Miriam Baglioni 2a540b6c01 added constants for the pid graph dump 2020-08-24 16:55:35 +02:00
Miriam Baglioni da103c399a resources for the pid graph dump test 2020-08-24 16:52:07 +02:00
Miriam Baglioni 630a6a1fe7 first tests for the pid graph dump 2020-08-24 16:51:26 +02:00
Miriam Baglioni 40c8d2de7b test resources for the dump of the pids graph 2020-08-24 16:50:39 +02:00
Miriam Baglioni bef79d3bdf first attempt to the dump of pids graph 2020-08-24 16:49:38 +02:00
Miriam Baglioni 85203c16e3 merge branch with master 2020-08-19 11:49:03 +02:00
Miriam Baglioni 2c783793ba removed the affiliation from the author to mirror the changes in the model 2020-08-19 11:48:12 +02:00
Miriam Baglioni f6bf888016 removed affiliation from author to mirror the changes in the model 2020-08-19 11:41:41 +02:00
Miriam Baglioni 66d0e0d3f2 - 2020-08-19 11:31:50 +02:00
Miriam Baglioni 1c593a9cfe - 2020-08-19 11:29:51 +02:00
Miriam Baglioni e42b2f5ae2 - 2020-08-19 11:29:09 +02:00
Miriam Baglioni f81ee22418 changed to mirror the changes in the model (Instance, CommunityInstance, GraphResult) 2020-08-19 11:28:26 +02:00
Miriam Baglioni 387be43fd4 changed to discriminate if dumping all the results type together or each one in its own archive 2020-08-19 11:25:27 +02:00
Miriam Baglioni c5858afb88 added parameter to guide the dump for the result (resultAggregation). true if all the result types should be dump together, false otherwise. 2020-08-19 11:24:14 +02:00
Miriam Baglioni d407852ac2 changed to reflect the changed in the model 2020-08-19 11:15:05 +02:00
Miriam Baglioni 47c21a8961 refactoring due to compilation 2020-08-19 11:11:57 +02:00
Miriam Baglioni 5570678c65 changed parameter name from hfdsNameNode to nameNode 2020-08-19 10:59:26 +02:00
Miriam Baglioni dc5096a327 refactoring due to compilation 2020-08-19 10:57:36 +02:00
Miriam Baglioni 96600ed04a modified test resource for mirroring the deletion of affiliation from author parameters 2020-08-14 20:41:49 +02:00
Miriam Baglioni 09f5b92763 added specific reference to class 2020-08-14 20:00:09 +02:00
Miriam Baglioni 37e7c43652 changed parameter name from hdfsNaemNode to nameNode 2020-08-14 18:18:25 +02:00
Miriam Baglioni d2a8a4961a refactoring 2020-08-13 18:50:33 +02:00
Miriam Baglioni a5043de5da added method to get the mapped instance 2020-08-13 18:45:50 +02:00
Miriam Baglioni fcd10f452c changed because of #40 (comment) 2020-08-13 12:55:32 +02:00
Miriam Baglioni fd48ae3b85 changed because of #40 (comment) 2020-08-13 12:19:15 +02:00
Miriam Baglioni 04a3e1ab38 disabled tests 2020-08-13 12:18:13 +02:00
Miriam Baglioni 2ede397933 Apply change because of #40 (comment) 2020-08-13 12:16:39 +02:00
Miriam Baglioni bfd1fcde6d removed not useful method and changed because of #40 (comment) and #40 (comment) 2020-08-13 12:14:37 +02:00
Miriam Baglioni 7fd8397123 apply changes in #40 (comment) 2020-08-13 12:13:15 +02:00
Miriam Baglioni 753d448cc9 apply changes in #40 (comment) 2020-08-13 12:12:58 +02:00
Miriam Baglioni c0e071fa26 apply changes in #40 (comment) 2020-08-13 12:12:40 +02:00
Miriam Baglioni 526db915bc apply changes in #40 (comment) 2020-08-13 12:12:16 +02:00
Miriam Baglioni b0fab0d138 apply changes in #40 (comment) 2020-08-13 12:11:57 +02:00
Miriam Baglioni 1b6320b251 apply changes in #40 (comment) 2020-08-13 12:11:41 +02:00
Miriam Baglioni 743d31be22 apply changes in #40 (comment) 2020-08-13 12:11:22 +02:00
Miriam Baglioni 65b48df652 apply changes in #40 (comment) 2020-08-13 12:11:06 +02:00
Miriam Baglioni 90b54d3efb apply changes in #40 (comment) 2020-08-13 12:08:24 +02:00
Miriam Baglioni 69bbb9592a apply changes in #40 (comment) 2020-08-13 12:07:39 +02:00
Miriam Baglioni 945323299a apply changes in #40 (comment) 2020-08-13 12:07:24 +02:00
Miriam Baglioni e04c993247 apply changes in #40 (comment) 2020-08-13 12:07:07 +02:00
Miriam Baglioni ed0812d0ce apply changes in #40 (comment) 2020-08-13 12:06:49 +02:00
Miriam Baglioni d55cfe0ea5 apply changes in #40 (comment) 2020-08-13 12:06:20 +02:00
Miriam Baglioni 80866bec7d apply changes in #40 (comment) 2020-08-13 12:06:05 +02:00
Miriam Baglioni 1400978c0a apply changes in #40 (comment) 2020-08-13 12:05:44 +02:00
Miriam Baglioni 7b941a2e0a apply changes in #40 (comment) 2020-08-13 12:05:17 +02:00
Miriam Baglioni f7474f50fe apply changes in #40 (comment) 2020-08-13 12:04:52 +02:00
Miriam Baglioni 367203f412 apply changes in #40 (comment) 2020-08-13 12:04:33 +02:00
Miriam Baglioni 3ab4809d31 apply changes in #40 (comment) 2020-08-13 12:04:10 +02:00
Miriam Baglioni 235d4e4d6e moved Context as relevant for Communities dump 2020-08-12 18:16:45 +02:00
Miriam Baglioni adf9f96a67 test for extraction of relation between organizations and context 2020-08-12 10:04:47 +02:00
Miriam Baglioni 7400cd019d removed not needed variable 2020-08-12 10:03:33 +02:00
Miriam Baglioni 98d28bab5c fixed missing _ in context nsprefix 2020-08-12 10:00:18 +02:00
Miriam Baglioni 25f4fbceea draft of test and resources 2020-08-11 17:37:22 +02:00
Miriam Baglioni 30a2b19b65 changed metadata for deposition od covid-19 dump in Zenodo 2020-08-11 17:36:56 +02:00
Miriam Baglioni 49788b532a changed to mirror changes in the schema 2020-08-11 16:05:03 +02:00
Miriam Baglioni b08511287b - 2020-08-11 16:01:36 +02:00
Miriam Baglioni 7e81a17068 changed the XQUERY to mirror the change in the code 2020-08-11 16:00:33 +02:00
Miriam Baglioni 37ad2f28e9 removed added | in prefix for datasource 2020-08-11 15:55:06 +02:00
Miriam Baglioni f31c2e9461 enabled test 2020-08-11 15:49:25 +02:00
Miriam Baglioni 2d67476417 merge branch with master 2020-08-11 15:46:04 +02:00
Miriam Baglioni 6d3804e24c - 2020-08-11 15:45:12 +02:00
Miriam Baglioni 0603ec4757 changed test to upload the dump for covid-19 community 2020-08-11 15:43:25 +02:00
Miriam Baglioni 7dfd56df9d - 2020-08-11 15:42:35 +02:00
Miriam Baglioni a169d7e7c1 added test file for the MakeTar class 2020-08-11 15:40:41 +02:00
Miriam Baglioni acb0926b2e json schemas for the dumped entities and relation 2020-08-11 15:39:48 +02:00
Miriam Baglioni ff52c51f92 added the communityMapPath parameter and removed the isLookUpUrl parameter 2020-08-11 15:39:22 +02:00
Miriam Baglioni 6f43acda5e added the maketar and send to zenodo step. Adjusted wf parameters 2020-08-11 15:38:20 +02:00
Miriam Baglioni ddc19de2e9 removed the isLookUpUrl among the parameters 2020-08-11 15:37:47 +02:00
Miriam Baglioni 592a8ea573 added parameter file for maketar class 2020-08-11 15:37:14 +02:00
Miriam Baglioni 77a0951b32 added the make archive step in the workflow 2020-08-11 15:32:32 +02:00
Miriam Baglioni cf4d918787 added description, changed parameter name and added method 2020-08-11 15:27:31 +02:00
Miriam Baglioni dc5fc5366d Creation of an archive for each related dump part 2020-08-11 15:26:06 +02:00
Miriam Baglioni 0ce49049d6 added description 2020-08-11 15:25:11 +02:00
Miriam Baglioni 9bae991167 added description of the class 2020-08-11 11:20:43 +02:00
Miriam Baglioni 341dc59ead removed the repartition(1). Added code for the creation of an archive containing all the parts dumped for each community 2020-08-11 11:18:58 +02:00
Miriam Baglioni 1991a49f70 removed reference to isLookUp to get the communityMap 2020-08-10 18:02:56 +02:00
Miriam Baglioni c378c38546 disabled test. The testing functionalities for hte upload in Zenode are moved to common 2020-08-10 12:41:11 +02:00
Miriam Baglioni 63ad0ed209 changed to use communityMapPath instead of IsLookUp 2020-08-10 12:40:19 +02:00
Miriam Baglioni cec795f2ea changed resources to mirror changes in the model 2020-08-10 12:39:35 +02:00